# terms

id: MONDO:0006762
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A condition occurring in the female offspring of dizygotic twins (twin, dizygotic) in a mixed-sex pregnancy, usually in cattle. Freemartinism can occur in other mammals. When placental fusion between the male and the female fetuses permits the exchange of fetal cells and fetal hormones, testicular hormones from the male fetus can androgenize the female fetus producing a sterile xx/xy chimeric 'female'(chimerism).","definition_xrefs":["MESH:D005611"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cattle disease","termid":"MONDO:0024913"},{"relation_name":"is_a","term_name":"difference of sexual differentiation, non-human animal","termid":"MONDO:0700105"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"freemartinism","secondary_identifiers":["EFO:1000939","DOID:4671"],"termid":"MONDO:0006762","xrefs":{"Monarch":{"xref_id":"0006762"}}}


id: GO:0051265
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: diolein + mono-olein = triolein + glycerol. Mono-olein, also known as mono-oleoylglycerol, is the monoglyceride formed from oleic acid, 9-octodecenoic acid; diolein is also known as dioleoylglycerol, and triolein as trioleoylglycerol and olein.","definition_xrefs":["PMID:15364929","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acylglycerol O-acyltransferase activity","termid":"GO:0016411"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016746","GO:0016740"],"is_obsolete":false,"name":"diolein transacylation activity","synonyms":[{"name":"DOG transacylation","type":"exact"},{"name":"acyl-CoA-independent diolein transacylation","type":"exact"},{"name":"dioleoylglycerol O-acyltransferase activity","type":"exact"},{"name":"dioleoylglycerol transacylase activity","type":"exact"}],"termid":"GO:0051265"}


id: MONDO:0006001
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A bladder infection that occurs as a manifetation of a systemic infection with one or more species of the parasitic worms of the Schistosoma type; this can progress to bladder cancer in time.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"bacterial urinary tract infection","termid":"MONDO:0005247"},{"relation_name":"is_a","term_name":"urinary bladder disorder","termid":"MONDO:0006026"},{"relation_name":"is_a","term_name":"schistosomiasis","termid":"MONDO:0015254"},{"relation_name":"is_a","term_name":"urinary tract infection","termid":"MONDO:0100338"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"urinary schistosomiasis","secondary_identifiers":["EFO:0007530","ICD9:120.0","MESH:D012553","UMLS:C1704430","SCTID:236706006","MEDGEN:312392","NCIT:C39294","DOID:1394"],"synonyms":[{"name":"Schistosoma haematobium","type":"exact"},{"name":"Schistosoma haematobium (& vesical schistosomiasis)","type":"exact"},{"name":"Schistosoma haematobium infection","type":"related"},{"name":"Schistosoma hematobium infection","type":"exact"},{"name":"Schistosoma hematobium infectious disease","type":"exact"},{"name":"bladder schistosomiasis","type":"exact"},{"name":"cystitis with bilharziasis","type":"exact"},{"name":"schistosomiasis due to Schistosoma haematobium","type":"exact"},{"name":"schistosomiasis of bladder","type":"exact"},{"name":"urinary bladder schistosomiasis","type":"exact"},{"name":"urinary schistosomiasis","type":"exact"},{"name":"vesical schistosomiasis","type":"exact"}],"termid":"MONDO:0006001","xrefs":{"Monarch":{"xref_id":"0006001"}}}


id: GO:0097719
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regrowth of neural tissue following its loss or destruction.","definition_xrefs":["Wikipedia:Neuroregeneration"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tissue regeneration","termid":"GO:0042246"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neural tissue regeneration","synonyms":[{"name":"neuroregeneration","type":"related"}],"termid":"GO:0097719"}


id: GO:2001271
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of cysteine-type endopeptidase activity involved in execution phase of apoptosis.","definition_xrefs":["GOC:mtg_apoptosis"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of cysteine-type endopeptidase activity involved in execution phase of apoptosis (obsolete GO:2001271)","synonyms":[{"name":"negative regulation of effector caspase activity","type":"narrow"}],"termid":"GO:2001271"}


id: PBO:0001970
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARP2/3 actin-organizing complex subunit Arc4","termid":"PBO:0001970"}


id: GO:1990670
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The joining of the lipid bilayer membrane around a vesicle to the lipid bilayer membrane around the Golgi cis cisterna. This can involve anterograde or retrograde transport vesicles.","definition_xrefs":["PMID:16038056","PMID:24119662","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle fusion","termid":"GO:0006906"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0008150","GO:0061024","GO:0006810","GO:0016192"],"is_obsolete":false,"name":"vesicle fusion with Golgi cis cisterna membrane","termid":"GO:1990670"}


id: MONDO:0030966
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurofacioskeletal syndrome with or without renal agenesis","secondary_identifiers":["UMLS:C5543070","OMIM:619194","MEDGEN:1778926"],"synonyms":[{"name":"NFSRA","type":"exact"},{"name":"Neurodevelopmental Disorder With Corpus Callosum Agenesis, Craniofacial Dysmorphism, and Skeletal Anomalies, With or Without Renal Agenesis","type":"exact"}],"termid":"MONDO:0030966","xrefs":{"Monarch":{"xref_id":"0030966"}}}


id: GO:0020033
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process by which a symbiont evades the host adaptive immune response by changing antigenic determinants on the symbiont surface that are exposed to host antibodies.","definition_xrefs":["PMID:37524976","PMID:29116635"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated evasion of host immune response","termid":"GO:0042783"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"antigenic variation","secondary_identifiers":["GO:0020034","Wikipedia:Antigenic_variation"],"synonyms":[{"name":"surface antigen variation","type":"narrow"}],"termid":"GO:0020033"}


id: SO:0001932
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A terminal region of DNA sequence where the end of the region is not blunt ended and the exposed single strand terminates at the 5' end.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"restriction_enzyme_single_strand_overhang","termid":"SO:0001695"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"restriction_enzyme_five_prime_single_strand_overhang","synonyms":[{"name":"restriction enzyme five prime single strand overhang","type":"exact"}],"termid":"SO:0001932"}


id: PR:Q10353
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A ribosome biogenesis protein RLP24 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02101"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis protein rlp24 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22E12.13c","secondary_identifiers":["UniProtKB:Q10353"],"synonyms":[{"name":"Spom972h-RSL24D1","type":"exact"}],"termid":"PR:Q10353"}


id: GO:0046565
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-dehydroshikimate = 3,4-dihydroxybenzoate + H2O. 3,4-dihydroxybenzoate is also known as protocatechuate.","definition_xrefs":["EC:4.2.1.118","MetaCyc:DHSHIKIMATE-DEHYDRO-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"3-dehydroshikimate dehydratase activity","secondary_identifiers":["RHEA:24848"],"termid":"GO:0046565"}


id: GO:0052430
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The alteration by an organism of the levels of RNA in a symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by host of symbiont RNA levels (obsolete GO:0052430)","termid":"GO:0052430"}


id: PBO:0110238
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rixosome complex armadillo-type fold Ipi1","termid":"PBO:0110238"}


id: PBO:0073194
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"selenoprotein W pseudogene 1","termid":"PBO:0073194"}


id: PBO:0059473
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MSL complex subunit 3","termid":"PBO:0059473"}


id: GO:0048394
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell becomes capable of differentiating autonomously into a intermediate mesoderm cell regardless of its environment; upon determination, the cell fate cannot be reversed.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesodermal cell fate determination","termid":"GO:0007500"},{"relation_name":"part_of","term_name":"intermediate mesodermal cell fate commitment","termid":"GO:0048393"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"intermediate mesodermal cell fate determination","synonyms":[{"name":"intermediate mesoderm cell fate determination","type":"exact"}],"termid":"GO:0048394"}


id: GO:0005262
data:
  {"annotated_genes":["SJAG_05229","SJAG_04471","SJAG_01090","SJAG_02019","SJAG_02532","SJAG_02877","SJAG_04668"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72730,77610,114820],"is_not":false,"summary":null,"term":"GO:0005262"},{"annotations":[99992],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008331"},{"annotations":[114307,92771,92713,99993],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015275"}]},"cv_name":"molecular_function","definition":"Enables the energy-independent facilitated diffusion of a calcium ion through a transmembrane aqueous pore or channel.","definition_xrefs":["GOC:pr","ISBN:0815340729","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoatomic cation channel activity","termid":"GO:0005261"},{"relation_name":"is_a","term_name":"calcium ion transmembrane transporter activity","termid":"GO:0015085"}],"gene_count":7,"genes_by_uniquename":{"SJAG_01090":null,"SJAG_02019":null,"SJAG_02532":null,"SJAG_02877":null,"SJAG_04471":null,"SJAG_04668":null,"SJAG_05229":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"calcium channel activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-210420","Reactome:R-HSA-3295579","Reactome:R-HSA-9663785","Reactome:R-HSA-8949145","Reactome:R-HSA-139854","Reactome:R-HSA-8949178","Reactome:R-HSA-9858800","Reactome:R-HSA-139855"],"termid":"GO:0005262","terms_by_termid":{"GO:0005262":null,"GO:0008331":null,"GO:0015275":null}}


id: FYECO:0000023
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Experiments were performed in the presence of cAMP. Presence can either imply exogenous addition of the chemical or the action of adenylate cyclase.","definition_xrefs":["PomBase:al"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE FYECO:0000023 presence of 3',5'-cyclic AMP (obsolete FYECO:0000023)","termid":"FYECO:0000023"}


id: MONDO:0005173
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A precancerous lesion of the skin composed of atypical keratinocytes. It is characterized by the presence of thick, scaly patches of skin. Several histologic variants have been described, including atrophic, acantholytic, and hyperkeratotic variants.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pre-malignant neoplasm","termid":"MONDO:0000611"},{"relation_name":"is_a","term_name":"skin neoplasm","termid":"MONDO:0002531"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"actinic keratosis","secondary_identifiers":["MEDGEN:9627","MESH:D055623","HP:0025127","SCTID:46795000","DOID:8866","EFO:0002496","ICD10CM:L57.0","SCTID:201101007","icd11.foundation:1803982621","NCIT:C3148","UMLS:C0022602","ICD9:702.0","ICD9:702.19"],"synonyms":[{"name":"SK - solar keratosis","type":"exact"},{"name":"Senile hyperkeratosis","type":"related"},{"name":"Senile keratosis","type":"related"},{"name":"actinic (solar) keratosis","type":"exact"},{"name":"actinic keratosis","type":"exact"},{"name":"actinic keratosis (disease)","type":"exact"},{"name":"senile keratosis","type":"related"},{"name":"solar keratosis","type":"exact"}],"termid":"MONDO:0005173","xrefs":{"Monarch":{"xref_id":"0005173"}}}


id: CHEBI:61049
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tacrolimus (anhydrous)","termid":"CHEBI:61049"}


id: PBO:0075210
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"syntrophin alpha 1","termid":"PBO:0075210"}


id: PBO:0026732
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_kinetochore_during_mitotic_metaphase","termid":"PBO:0026732"}


id: MONDO:1011348
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Post-Infectious disorder that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-human animal disease","termid":"MONDO:0005583"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"post-infectious disorder, non-human animal","termid":"MONDO:1011348","xrefs":{"Monarch":{"xref_id":"1011348"}}}


id: PBO:0081657
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 582","termid":"PBO:0081657"}


id: MONDO:0004294
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare malignant trophoblastic tumor that arises from the ovary as a result of ectopic ovarian pregnancy. There is no germ cell component present.","definition_xrefs":["NCIT:C40442"],"direct_ancestors":[{"relation_name":"is_a","term_name":"choriocarcinoma of ovary","termid":"MONDO:0003507"},{"relation_name":"is_a","term_name":"malignant non-dysgerminomatous germ cell tumor of ovary","termid":"MONDO:0016096"},{"relation_name":"is_a","term_name":"gestational choriocarcinoma","termid":"MONDO:0020550"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"gestational ovarian choriocarcinoma","secondary_identifiers":["MEDGEN:274586","DOID:7591","UMLS:C1517538"],"synonyms":[{"name":"gestational ovarian choriocarcinoma","type":"exact"}],"termid":"MONDO:0004294","xrefs":{"Monarch":{"xref_id":"0004294"}}}


id: MONDO:0030313
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"encephalitis, acute, infection-induced, susceptibility to","termid":"MONDO:0800174"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"encephalopathy, acute, infection-induced (herpes-specific), susceptibility to, 10","secondary_identifiers":["MEDGEN:1782836","OMIM:619396","UMLS:C5543600"],"synonyms":[{"name":"IIAE10","type":"exact"},{"name":"encephalopathy, acute, infection-induced (herpes-specific), susceptibility to, 10","type":"exact"},{"name":"herpes simplex encephalitis, susceptibility to, 7","type":"related"}],"termid":"MONDO:0030313","xrefs":{"Monarch":{"xref_id":"0030313"}}}


id: PBO:0090129
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arrestin-related substrate adaptor Any1","termid":"PBO:0090129"}


id: GO:1901862
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of muscle tissue development.","definition_xrefs":["GOC:yaf","GOC:TermGenie","PMID:23150719"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"regulation of muscle tissue development","termid":"GO:1901861"},{"relation_name":"negatively_regulates","term_name":"muscle tissue development","termid":"GO:0060537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of muscle tissue development","synonyms":[{"name":"down regulation of muscle tissue development","type":"exact"},{"name":"down-regulation of muscle tissue development","type":"exact"},{"name":"downregulation of muscle tissue development","type":"exact"},{"name":"inhibition of muscle tissue development","type":"narrow"}],"termid":"GO:1901862"}


id: GO:0004245
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the preferential cleavage at the amino group of hydrophobic residues in insulin, casein, hemoglobin, and a number of other proteins and polypeptides.","definition_xrefs":["GOC:curator"],"gene_count":0,"genotype_count":0,"name":"obsolete neprilysin activity (obsolete GO:0004245)","synonyms":[{"name":"CALLA","type":"related"},{"name":"CALLA (common acute lymphoblastic leukemia-associated) antigens","type":"related"},{"name":"CALLA antigen","type":"related"},{"name":"CALLA glycoprotein","type":"related"},{"name":"CALLA glycoproteins","type":"related"},{"name":"CD10","type":"related"},{"name":"acute lymphoblastic leukemia antigen","type":"related"},{"name":"common acute lymphoblastic leukemia antigen","type":"related"},{"name":"common acute lymphoblastic leukemia-associated antigens","type":"related"},{"name":"endopeptidase 24.11","type":"related"},{"name":"endopeptidase-2 activity","type":"broad"},{"name":"enkephalinase activity","type":"related"},{"name":"kidney-brush-border neutral endopeptidase","type":"narrow"},{"name":"kidney-brush-border neutral peptidase","type":"narrow"},{"name":"kidney-brush-border neutral proteinase activity","type":"narrow"},{"name":"membrane metalloendopeptidase activity","type":"narrow"},{"name":"neprilysin activity","type":"exact"},{"name":"neutral endopeptidase 24.11","type":"related"},{"name":"neutral endopeptidase activity","type":"related"},{"name":"neutral metallendopeptidase activity","type":"related"}],"termid":"GO:0004245"}


id: PBO:0059575
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metallothionein 2 pseudogene 1","termid":"PBO:0059575"}


id: MONDO:0015506
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare syndrome with cardiac malformations (obsolete MONDO:0015506)","secondary_identifiers":["Orphanet:156532"],"termid":"MONDO:0015506","xrefs":{"Monarch":{"xref_id":"0015506"}}}


id: PBO:0075229
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin 4","termid":"PBO:0075229"}


id: MONDO:0002531
data:
  {"annotated_genes":["SJAG_02855","SJAG_03453","SJAG_01111","SJAG_04213"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85701],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010621"},{"annotations":[87159],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0044792"},{"annotations":[86251],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008097"},{"annotations":[85833],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009578"},{"annotations":[85410],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008093"},{"annotations":[87677,87676],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0024517"}]},"cv_name":"mondo","definition":"A benign or malignant tumor involving the skin. Representative examples of benign skin neoplasms include the benign melanocytic skin nevus, acanthoma, sebaceous adenoma, sweat gland adenoma, lipoma, hemangioma, fibroma, and benign fibrous histiocytoma. Representative examples of malignant skin neoplasms include basal cell carcinoma, squamous cell carcinoma, melanoma, and Kaposi sarcoma.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neoplasm","termid":"MONDO:0005070"},{"relation_name":"is_a","term_name":"skin disorder","termid":"MONDO:0005093"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01111":null,"SJAG_02855":null,"SJAG_03453":null,"SJAG_04213":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"skin neoplasm","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NCIT:C3372","MESH:D012878","UMLS:C0037286","EFO:0004198","DOID:3165","SCTID:126488004","ONCOTREE:SKIN","MEDGEN:19993","ICD9:239.2"],"synonyms":[{"name":"neoplasm of skin","type":"exact"},{"name":"neoplasm of skin by site","type":"exact"},{"name":"neoplasm of the skin","type":"exact"},{"name":"neoplasm of zone of skin","type":"exact"},{"name":"skin","type":"related"},{"name":"skin benign neoplasm","type":"related"},{"name":"skin neoplasm","type":"exact"},{"name":"skin neoplasms","type":"exact"},{"name":"skin tumor","type":"exact"},{"name":"skin tumour","type":"exact"},{"name":"tumor of skin","type":"exact"},{"name":"tumor of the skin","type":"exact"},{"name":"tumor of zone of skin","type":"exact"},{"name":"tumour of skin","type":"exact"},{"name":"tumour of the skin","type":"exact"},{"name":"tumour of zone of skin","type":"exact"},{"name":"zone of skin neoplasm","type":"exact"},{"name":"zone of skin neoplasm (disease)","type":"exact"},{"name":"zone of skin tumor","type":"exact"},{"name":"zone of skin tumour","type":"exact"}],"termid":"MONDO:0002531","terms_by_termid":{"MONDO:0008093":null,"MONDO:0008097":null,"MONDO:0009578":null,"MONDO:0010621":null,"MONDO:0024517":null,"MONDO:0044792":null},"xrefs":{"Monarch":{"xref_id":"0002531"}}}


id: GO:0034303
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which differentiated, resting cells are formed, usually within a fruiting body by Myxobacteria. The myxospore is more resistant to high temperature, desiccation, and UV than vegetative myxobacteria.","definition_xrefs":["ISBN:0122268008","GOC:ds"],"direct_ancestors":[{"relation_name":"is_a","term_name":"asexual sporulation resulting in formation of a cellular spore","termid":"GO:0043936"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"myxospore formation","termid":"GO:0034303"}


id: GO:0072748
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a tacrolimus (FK506) stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to tacrolimus","termid":"GO:1901327"},{"relation_name":"is_a","term_name":"cellular response to nitrogen compound","termid":"GO:1901699"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to tacrolimus","synonyms":[{"name":"cellular response to FK506","type":"exact"},{"name":"cellular response to tacrolimus hydrate","type":"exact"}],"termid":"GO:0072748"}


id: PBO:0049913
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HEXIM P-TEFb complex subunit 1","termid":"PBO:0049913"}


id: PBO:0052576
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysine methyltransferase 5B","termid":"PBO:0052576"}


id: PBO:0053635
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 681","termid":"PBO:0053635"}


id: SO:0001176
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Non-base-paired sequence of nucleotide bases in tRNA. It contains several dihydrouracil residues.","definition_xrefs":["ISBN:071671920"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA_region","termid":"SO:0001172"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DHU_loop","synonyms":[{"name":"D loop","type":"related"},{"name":"DHU loop","type":"exact"}],"termid":"SO:0001176"}


id: MONDO:0017145
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"anemia","termid":"MONDO:0002280"},{"relation_name":"is_a","term_name":"inherited hemoglobinopathy","termid":"MONDO:0019050"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0002280"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0002280"],"is_obsolete":false,"name":"beta-thalassemia and related diseases","secondary_identifiers":["UMLS:C5680748","GARD:21023","Orphanet:275749","MEDGEN:1826095"],"termid":"MONDO:0017145","xrefs":{"Monarch":{"xref_id":"0017145"}}}


id: GO:0046285
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving flavonoid phytoalexins, a group of water-soluble phenolic derivatives containing a flavan skeleton, which possess antibiotic activity and are produced by plant tissues in response to infection.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"flavonoid metabolic process","termid":"GO:0009812"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"flavonoid phytoalexin metabolic process","synonyms":[{"name":"flavonoid phytoalexin metabolism","type":"exact"}],"termid":"GO:0046285"}


id: GO:0090233
data:
  {"annotated_genes":["SJAG_01679","SJAG_03681","SJAG_01297","SJAG_02451","SJAG_03353","SJAG_04259","SJAG_02336","SJAG_03126","SJAG_02169","SJAG_00883"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[99951,114651,107600,114164,116281,112344,91085,108630,104255],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902426"},{"annotations":[94563],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140499"}]},"cv_name":"biological_process","definition":"Any process that decreases the rate, frequency, or extent of the spindle checkpoint, a cell cycle checkpoint that delays the metaphase/anaphase transition until the spindle is correctly assembled and oriented, and chromosomes are attached to the spindle.","definition_xrefs":["GOC:tb","GOC:dph","GOC:ascb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of spindle checkpoint","termid":"GO:0090231"},{"relation_name":"is_a","term_name":"negative regulation of cell cycle checkpoint","termid":"GO:1901977"},{"relation_name":"negatively_regulates","term_name":"spindle checkpoint signaling","termid":"GO:0031577"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00883":null,"SJAG_01297":null,"SJAG_01679":null,"SJAG_02169":null,"SJAG_02336":null,"SJAG_02451":null,"SJAG_03126":null,"SJAG_03353":null,"SJAG_03681":null,"SJAG_04259":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0007049","GO:0008150"],"is_obsolete":false,"name":"negative regulation of spindle checkpoint","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"spindle checkpoint silencing","type":"narrow"}],"termid":"GO:0090233","terms_by_termid":{"GO:0140499":null,"GO:1902426":null}}


id: MONDO:0003722
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A meningioma that affects the internal auditory canal.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"skull base meningioma","termid":"MONDO:0002998"},{"relation_name":"excluded_subClassOf","term_name":"auditory system cancer","termid":"MONDO:0004532"},{"relation_name":"is_a","term_name":"middle cranial fossa meningioma","termid":"MONDO:0003121"},{"relation_name":"is_a","term_name":"inner ear neoplasm","termid":"MONDO:0024320"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"internal auditory canal meningioma","secondary_identifiers":["UMLS:C1334227","DOID:5990","NCIT:C5307","MEDGEN:235221"],"synonyms":[{"name":"internal acoustic meatus meningioma (disease)","type":"exact"},{"name":"meningioma (disease) of internal acoustic meatus","type":"exact"},{"name":"meningioma of internal auditory canal","type":"exact"},{"name":"meningioma of the internal auditory canal","type":"exact"}],"termid":"MONDO:0003722","xrefs":{"Monarch":{"xref_id":"0003722"}}}


id: MONDO:0100479
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A form of drug-resistant tuberculosis that is resisant to rifampicin with or without resistance to other antitubercular medications.","definition_xrefs":["PMID:25918181","PMID:29319042"],"direct_ancestors":[{"relation_name":"is_a","term_name":"drug-resistant tuberculosis","termid":"MONDO:0041806"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rifampicin-resistant tuberculosis","secondary_identifiers":["MEDGEN:735456","UMLS:C1532782"],"synonyms":[{"name":"RR-TB","type":"exact"},{"name":"rifampicin-resistant TB","type":"exact"}],"termid":"MONDO:0100479","xrefs":{"Monarch":{"xref_id":"0100479"}}}


id: PBO:0054649
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2054","termid":"PBO:0054649"}


id: PBO:0028972
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_plasma_membrane","termid":"PBO:0028972"}


id: GO:0070747
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with interleukin-35 and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:signaling","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor activity","termid":"GO:0004896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"interleukin-35 receptor activity","synonyms":[{"name":"IL-35 receptor activity","type":"exact"},{"name":"IL-35R","type":"exact"}],"termid":"GO:0070747"}


id: PBO:0067868
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 170","termid":"PBO:0067868"}


id: PBO:0082907
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cysteine aminopeptidase with homocysteine-thiolactonase activity; protects cells against homocysteine toxicity; cytosolic protein, selectively transported to vacuole during nitrogen starvation; has bleomycin hydrolase activity in vitro; transcription is regulated by galactose via Gal4p; orthologous to human BLMH","termid":"PBO:0082907"}


id: PBO:0069975
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1270, pseudogene","termid":"PBO:0069975"}


id: PBO:0053623
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 665","termid":"PBO:0053623"}


id: PBO:0083912
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Forkhead family transcription factor; rate-limiting activator of replication origins; evolutionarily conserved regulator of lifespan; binds multiple chromosomal elements with distinct specificities, cell cycle dynamics; positively regulates transcriptional elongation; facilitates clustering, activation of early-firing replication origins; negative role in chromatin silencing at HML and HMR; major role in expression of G2/M phase genes; relocalizes to cytosol under hypoxia","termid":"PBO:0083912"}


id: GO:1990807
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the transfer of an acetyl group to a nitrogen atom on the amino acid of a protein.","definition_xrefs":["GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete protein N-acetyltransferase activity (obsolete GO:1990807)","termid":"GO:1990807"}


id: PBO:0069896
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1187, pseudogene","termid":"PBO:0069896"}


id: GO:2000853
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of corticosterone secretion.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of glucocorticoid secretion","termid":"GO:2000850"},{"relation_name":"is_a","term_name":"regulation of corticosterone secretion","termid":"GO:2000852"},{"relation_name":"negatively_regulates","term_name":"corticosterone secretion","termid":"GO:0035934"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0023052","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of corticosterone secretion","termid":"GO:2000853"}


id: GO:0044277
data:
  {"annotated_genes":["SJAG_02718","SJAG_01888","SJAG_00667","SJAG_03646","SJAG_03444","SJAG_01017","SJAG_01171","SJAG_05001"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[108444,102306,88636,100514,102307,89457,94385,111699],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904541"}]},"cv_name":"biological_process","definition":"A process that results in the breakdown of the cell wall.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component disassembly","termid":"GO:0022411"},{"relation_name":"is_a","term_name":"cell wall organization","termid":"GO:0071555"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00667":null,"SJAG_01017":null,"SJAG_01171":null,"SJAG_01888":null,"SJAG_02718":null,"SJAG_03444":null,"SJAG_03646":null,"SJAG_05001":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0071554"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0071554","GO:0008150"],"is_obsolete":false,"name":"cell wall disassembly","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0060871"],"synonyms":[{"name":"cellular cell wall disassembly","type":"exact"}],"termid":"GO:0044277","terms_by_termid":{"GO:1904541":null}}


id: MONDO:0021377
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A form of lichen planus that is characterized by plaques of markedly thickened skin that is often extremely pruritic and localized to the lower legs. It can result in permanent pigmentation and scarring.","definition_xrefs":["NCIT:C34779"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lichen planus","termid":"MONDO:0006572"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"hypertrophic lichen planus","secondary_identifiers":["SCTID:68266006","UMLS:C0023649","MEDGEN:9756","icd11.foundation:1096967508"],"synonyms":[{"name":"Hypertrophic Lichen Planus","type":"related"},{"name":"Hypertrophic lichen planus","type":"related"},{"name":"Lichen planus hypertrophicus","type":"related"},{"name":"hypertrophic lichen planus","type":"exact"},{"name":"lichen planus hypertrophicus","type":"related"}],"termid":"MONDO:0021377","xrefs":{"Monarch":{"xref_id":"0021377"}}}


id: PBO:0050437
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein L pseudogene 1","termid":"PBO:0050437"}


id: GO:0061645
data:
  {"annotated_genes":["SJAG_00152","SJAG_00677","SJAG_03455","SJAG_01894","SJAG_02177","SJAG_03025","SJAG_03088","SJAG_03380","SJAG_00700","SJAG_04517","SJAG_04461","SJAG_01748","SJAG_00920","SJAG_00185","SJAG_03145","SJAG_02700","SJAG_04982","SJAG_04887","SJAG_02282","SJAG_03596","SJAG_01993","SJAG_04886","SJAG_04724","SJAG_02511","SJAG_02202","SJAG_01114","SJAG_00970","SJAG_01732","SJAG_02566","SJAG_01964","SJAG_04052","SJAG_04644","SJAG_03375","SJAG_04465","SJAG_04100","SJAG_03011","SJAG_03146","SJAG_04479","SJAG_03465","SJAG_02075","SJAG_00649","SJAG_03119","SJAG_01268","SJAG_03044","SJAG_03086","SJAG_00521","SJAG_02245","SJAG_03581","SJAG_00907","SJAG_04001","SJAG_01384","SJAG_02228"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[94938],"is_not":false,"summary":null,"term":"GO:0061645"},{"annotations":[79998,100038,103099,78115,94014,76421,94183,79532,74815,103423,105509,112048,74342,116546,65121,118875,107404,69721,98272,101278,91029,102870,107221,111064,111401,80567,114697,79676,70374,102106,95644,112544,115261,92942,105527,77228,72441,69622,75139,106394,77238,119239,101308,112571,113284,66225,105718,75612,109428,98077,88503],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030479"}]},"cv_name":"cellular_component","definition":"The part of the cell cortex consisting of an aggregation of proteins that will give rise to an endocytic vesicle.","definition_xrefs":["GOC:dph","PMID:22949647"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"cell cortex","termid":"GO:0005938"}],"gene_count":52,"genes_by_uniquename":{"SJAG_00152":null,"SJAG_00185":null,"SJAG_00521":null,"SJAG_00649":null,"SJAG_00677":null,"SJAG_00700":null,"SJAG_00907":null,"SJAG_00920":null,"SJAG_00970":null,"SJAG_01114":null,"SJAG_01268":null,"SJAG_01384":null,"SJAG_01732":null,"SJAG_01748":null,"SJAG_01894":null,"SJAG_01964":null,"SJAG_01993":null,"SJAG_02075":null,"SJAG_02177":null,"SJAG_02202":null,"SJAG_02228":null,"SJAG_02245":null,"SJAG_02282":null,"SJAG_02511":null,"SJAG_02566":null,"SJAG_02700":null,"SJAG_03011":null,"SJAG_03025":null,"SJAG_03044":null,"SJAG_03086":null,"SJAG_03088":null,"SJAG_03119":null,"SJAG_03145":null,"SJAG_03146":null,"SJAG_03375":null,"SJAG_03380":null,"SJAG_03455":null,"SJAG_03465":null,"SJAG_03581":null,"SJAG_03596":null,"SJAG_04001":null,"SJAG_04052":null,"SJAG_04100":null,"SJAG_04461":null,"SJAG_04465":null,"SJAG_04479":null,"SJAG_04517":null,"SJAG_04644":null,"SJAG_04724":null,"SJAG_04886":null,"SJAG_04887":null,"SJAG_04982":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005938"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0005938"],"is_obsolete":false,"name":"endocytic patch","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000044":null,"GO_REF:0000107":null},"termid":"GO:0061645","terms_by_termid":{"GO:0030479":null,"GO:0061645":null}}


id: PBO:0001724
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase Cki3","termid":"PBO:0001724"}


id: GO:0009220
data:
  {"annotated_genes":["SJAG_00197","SJAG_03708","SJAG_04709","SJAG_05024","SJAG_00779","SJAG_00964","SJAG_02887","SJAG_04354","SJAG_04713","SJAG_03164","SJAG_00694","SJAG_00444","SJAG_00533"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[63433],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044210"},{"annotations":[57253,61266,62026,59193,59527],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044205"},{"annotations":[80779],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046705"},{"annotations":[68264],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009224"},{"annotations":[64654],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006241"},{"annotations":[68266,93334],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044211"},{"annotations":[80781],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006225"},{"annotations":[87821,88810,92333,68265,93335],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044206"},{"annotations":[64653],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006228"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a pyrimidine ribonucleotide, a compound consisting of nucleoside (a pyrimidine base linked to a ribose sugar) esterified with a phosphate group at either the 3' or 5'-hydroxyl group of the sugar.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleotide biosynthetic process","termid":"GO:0006221"},{"relation_name":"is_a","term_name":"pyrimidine ribonucleotide metabolic process","termid":"GO:0009218"},{"relation_name":"is_a","term_name":"ribonucleotide biosynthetic process","termid":"GO:0009260"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00197":null,"SJAG_00444":null,"SJAG_00533":null,"SJAG_00694":null,"SJAG_00779":null,"SJAG_00964":null,"SJAG_02887":null,"SJAG_03164":null,"SJAG_03708":null,"SJAG_04354":null,"SJAG_04709":null,"SJAG_04713":null,"SJAG_05024":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"pyrimidine ribonucleotide biosynthetic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"secondary_identifiers":["MetaCyc:PWY0-162"],"synonyms":[{"name":"pyrimidine ribonucleotide anabolism","type":"exact"},{"name":"pyrimidine ribonucleotide biosynthesis","type":"exact"},{"name":"pyrimidine ribonucleotide formation","type":"exact"},{"name":"pyrimidine ribonucleotide synthesis","type":"exact"}],"termid":"GO:0009220","terms_by_termid":{"GO:0006225":null,"GO:0006228":null,"GO:0006241":null,"GO:0009224":null,"GO:0044205":null,"GO:0044206":null,"GO:0044210":null,"GO:0044211":null,"GO:0046705":null}}


id: GO:1900660
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of emericellamide biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of amide metabolic process","termid":"GO:0034250"},{"relation_name":"is_a","term_name":"positive regulation of lipid biosynthetic process","termid":"GO:0046889"},{"relation_name":"is_a","term_name":"positive regulation of small molecule metabolic process","termid":"GO:0062013"},{"relation_name":"is_a","term_name":"positive regulation of secondary metabolite biosynthetic process","termid":"GO:1900378"},{"relation_name":"is_a","term_name":"regulation of emericellamide biosynthetic process","termid":"GO:1900658"},{"relation_name":"positively_regulates","term_name":"emericellamide biosynthetic process","termid":"GO:1900557"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006629"},{"rel_name":"positively_regulates","termid":"GO:0019748"},{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0019748","GO:0006629"],"is_obsolete":false,"name":"positive regulation of emericellamide biosynthetic process","synonyms":[{"name":"activation of emericellamide anabolism","type":"exact"},{"name":"activation of emericellamide biosynthesis","type":"exact"},{"name":"activation of emericellamide biosynthetic process","type":"narrow"},{"name":"activation of emericellamide formation","type":"exact"},{"name":"activation of emericellamide synthesis","type":"exact"},{"name":"positive regulation of emericellamide anabolism","type":"exact"},{"name":"positive regulation of emericellamide biosynthesis","type":"exact"},{"name":"positive regulation of emericellamide formation","type":"exact"},{"name":"positive regulation of emericellamide synthesis","type":"exact"},{"name":"up regulation of emericellamide anabolism","type":"exact"},{"name":"up regulation of emericellamide biosynthesis","type":"exact"},{"name":"up regulation of emericellamide biosynthetic process","type":"exact"},{"name":"up regulation of emericellamide formation","type":"exact"},{"name":"up regulation of emericellamide synthesis","type":"exact"},{"name":"up-regulation of emericellamide anabolism","type":"exact"},{"name":"up-regulation of emericellamide biosynthesis","type":"exact"},{"name":"up-regulation of emericellamide biosynthetic process","type":"exact"},{"name":"up-regulation of emericellamide formation","type":"exact"},{"name":"up-regulation of emericellamide synthesis","type":"exact"},{"name":"upregulation of emericellamide anabolism","type":"exact"},{"name":"upregulation of emericellamide biosynthesis","type":"exact"},{"name":"upregulation of emericellamide biosynthetic process","type":"exact"},{"name":"upregulation of emericellamide formation","type":"exact"},{"name":"upregulation of emericellamide synthesis","type":"exact"}],"termid":"GO:1900660"}


id: MOD:00965
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an N-terminal L-cysteine residue by a formadehyde adduct to 4-thiazolidinecarboxylic acid.","definition_xrefs":["DeltaMass:342"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"4-thiazolidinecarboxylic acid","synonyms":[{"name":"thioproline","type":"exact"}],"termid":"MOD:00965"}


id: GO:0102877
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-trans,6-trans-farnesyl diphosphate = alpha-copaene + diphosphoric acid.","definition_xrefs":["EC:4.2.3.133","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on phosphates","termid":"GO:0016838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"alpha-copaene synthase activity","secondary_identifiers":["MetaCyc:RXN-8416","RHEA:33991"],"termid":"GO:0102877"}


id: MONDO:0002906
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete scleroderma (obsolete MONDO:0002906)","termid":"MONDO:0002906","xrefs":{"Monarch":{"xref_id":"0002906"}}}


id: FYPO:0007779
data:
  {"alleles_by_uniquename":{"SJAG_00124:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00124","name":"SJAG_00124delta","uniquename":"SJAG_00124:allele-1"},"SJAG_01787:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01787","name":"pck1delta","uniquename":"SJAG_01787:allele-1"},"SJAG_02592:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02592","name":"sty1delta","uniquename":"SJAG_02592:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[119734],"is_not":false,"summary":null,"term":"FYPO:0007779"}],"single_locus_phenotype":[{"annotations":[119725,119810],"is_not":false,"summary":null,"term":"FYPO:0007779"}]},"cv_name":"fission_yeast_phenotype","definition":"A phenotype in which the mycelium formed by fission yeast undergoing hyphal growth covers a larger area than normal.","definition_xrefs":["PMID:31150379","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal hyphal growth","termid":"FYPO:0007773"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00124":null,"SJAG_01787":null,"SJAG_02592":null},"genotype_count":3,"genotypes_by_uniquename":{"SJAG_00124delta__sty1delta":{"display_name":"SJAG_00124delta sty1delta","display_uniquename":"SJAG_00124delta__sty1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00124:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_02592:allele-1","expression":"Null"}]}]},"pck1delta":{"display_name":"pck1delta","display_uniquename":"pck1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01787:allele-1","expression":"Null"}]}]},"sty1delta":{"display_name":"sty1delta","display_uniquename":"sty1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02592:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0007773"}],"interesting_parent_ids":["FYPO:0007773","FYPO:0000002"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_00124","SJAG_02592"],"name":"increased mycelial expansion","references_by_uniquename":{"PMID:31150379":null,"PMID:34198697":null},"single_locus_annotated_genes":["SJAG_01787","SJAG_02592"],"single_locus_genotype_uniquenames":["sty1delta","pck1delta"],"termid":"FYPO:0007779","terms_by_termid":{"FYPO:0007779":null,"FYPO_EXT:0000002":null}}


id: PATO:0002224
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An angular shape quality inhering in a bearer by virtue of the bearer's having a single angle in its length giving the bearer the form of the letter V.","definition_xrefs":["PATOC:JE"],"direct_ancestors":[{"relation_name":"is_a","term_name":"angular","termid":"PATO:0001977"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V-shaped","termid":"PATO:0002224"}


id: GO:0019452
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of L-cysteine into other compounds, including taurine.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-cysteine catabolic process","termid":"GO:0019448"},{"relation_name":"is_a","term_name":"taurine metabolic process","termid":"GO:0019530"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0006520","GO:0006790","GO:0008150"],"is_obsolete":false,"name":"L-cysteine catabolic process to taurine","synonyms":[{"name":"L-cysteine breakdown to taurine","type":"exact"},{"name":"L-cysteine degradation to taurine","type":"exact"}],"termid":"GO:0019452"}


id: PBO:0041589
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CA3 antisense RNA 1","termid":"PBO:0041589"}


id: GO:1901325
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an antimycin A stimulus.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to antimycin A","termid":"GO:1901325"}


id: GO:0005436
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: Na+(out) + phosphate(out) = Na+(in) + phosphate(in).","definition_xrefs":["TC:2.A.1.14.6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphate transmembrane transporter activity","termid":"GO:0005315"},{"relation_name":"is_a","term_name":"solute:sodium symporter activity","termid":"GO:0015370"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"sodium:phosphate symporter activity","secondary_identifiers":["Reactome:R-HSA-5651971","GO:0015321","Reactome:R-HSA-2872498","Reactome:R-HSA-427605","Reactome:R-HSA-427645","Reactome:R-HSA-5625123","Reactome:R-HSA-427656","Reactome:R-HSA-5687585","Reactome:R-HSA-5651685","Reactome:R-HSA-428609","Reactome:R-HSA-5651697"],"synonyms":[{"name":"sodium-dependent phosphate transmembrane transporter activity","type":"related"},{"name":"sodium/phosphate symporter activity","type":"exact"}],"termid":"GO:0005436"}


id: GO:0103028
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: a peptidoglycan dimer (generic) = a lipid II + GlcNAc-1,6-anhydro-MurNAc-pentapeptide.","definition_xrefs":["MetaCyc:RXN0-5190","GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete murein hydrolase activity (obsolete GO:0103028)","termid":"GO:0103028"}


id: GO:2000605
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of secondary growth.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of growth","termid":"GO:0045927"},{"relation_name":"is_a","term_name":"regulation of secondary growth","termid":"GO:2000603"},{"relation_name":"positively_regulates","term_name":"secondary growth","termid":"GO:0080117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of secondary growth","termid":"GO:2000605"}


id: GO:0018392
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N(4)-{N-acetyl-beta-D-glucosaminyl-(1->2)-alpha-D-mannosyl-(1->3)-[N-acetyl-beta-D-glucosaminyl-(1->2)-alpha-D-mannosyl-(1->6)]-beta-D-mannosyl-(1->4)-N-acetyl-beta-D-glucosaminyl-(1->4)-N-acetyl-beta-D-glucosaminyl}-L-asparagine + GDP-L-fucose = N(4)-{N-acetyl-beta-D-glucosaminyl-(1->2)-alpha-D-mannosyl-(1->3)-[N-acetyl-beta-D-glucosaminyl-(1->2)-alpha-D-mannosyl-(1->6)]-beta-D-mannosyl-(1->4)-N-acetyl-beta-D-glucosaminyl-(1->4)-[alpha-L-fucosyl-(1->3)]-N-acetyl-beta-D-glucosaminyl}-L-asparagine + GDP + H+.","definition_xrefs":["RHEA:24444","EC:2.4.1.214"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-(1->3)-fucosyltransferase activity","termid":"GO:0046920"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a glycoprotein","termid":"GO:0140103"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016757","GO:0003674","GO:0016740","GO:0003824","GO:0140096"],"is_obsolete":false,"name":"glycoprotein 3-alpha-L-fucosyltransferase activity","secondary_identifiers":["KEGG_REACTION:R06015","MetaCyc:2.4.1.214-RXN"],"synonyms":[{"name":"GDP-L-Fuc:Asn-linked GlcNAc alpha-1,3-fucosyltransferase activity","type":"related"},{"name":"GDP-L-Fuc:Asn-linked GlcNAc alpha1,3-fucosyltransferase activity","type":"related"},{"name":"GDP-L-Fuc:N-acetyl-beta-D-glucosaminide alpha-1,3-fucosyltransferase activity","type":"related"},{"name":"GDP-L-Fuc:N-acetyl-beta-D-glucosaminide alpha1,3-fucosyltransferase activity","type":"related"},{"name":"GDP-L-fucose:asparagine-linked N-acetylglucosamine alpha(1,3)-fucosyltransferase activity","type":"exact"},{"name":"GDP-L-fucose:glycoprotein (L-fucose to asparagine-linked N-acetylglucosamine of 4-N-{N-acetyl-beta-D-glucosaminyl-(1->2)-alpha-D-mannosyl-(1->3)-[N-acetyl-beta-D-glucosaminyl-(1->2)-alpha-D-mannosyl-(1->6)]-beta-D-mannosyl-(1->4)-N-acetyl-beta-D-glucosaminyl-(1->4)-N-acetyl-beta-D-glucosaminyl}asparagine) 3-alpha-L-fucosyl-transferase activity","type":"related"},{"name":"GDP-L-fucose:glycoprotein (L-fucose to asparagine-linked N-acetylglucosamine of N4-{N-acetyl-beta-D-glucosaminyl-(1->2)-alpha-D-mannosyl-(1->3)-[N-acetyl-beta-D-glucosaminyl-(1->2)-alpha-D-mannosyl-(1->6)]-beta-D-mannosyl-(1->4)-N-acetyl-beta-D-glucosaminyl-(1->4)-N-acetyl-beta-D-glucosaminyl}asparagine) 3-alpha-L-fucosyl-transferase activity","type":"related"},{"name":"GDP-fucose:beta-N-acetylglucosamine (Fuc to (Fuc-alpha-1->6-GlcNAc)-Asn-peptide) alpha-1->3-fucosyltransferase activity","type":"related"},{"name":"GDP-fucose:beta-N-acetylglucosamine (Fuc to (Fucalpha1->6-GlcNAc)-Asn-peptide) alpha1->3-fucosyltransferase activity","type":"related"},{"name":"GDP-fucose:beta-N-acetylglucosamine (Fuc to (Fucalpha1->6GlcNAc)-Asn-peptide) alpha1->3-fucosyltransferase activity","type":"related"}],"termid":"GO:0018392"}


id: GO:0006173
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of dADP, deoxyadenosine diphosphate (2'-deoxyadenosine 5'-diphosphate).","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine deoxyribonucleotide biosynthetic process","termid":"GO:0009153"},{"relation_name":"is_a","term_name":"purine deoxyribonucleoside diphosphate biosynthetic process","termid":"GO:0009183"},{"relation_name":"is_a","term_name":"dADP metabolic process","termid":"GO:0046056"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"dADP biosynthetic process","synonyms":[{"name":"dADP anabolism","type":"exact"},{"name":"dADP biosynthesis","type":"exact"},{"name":"dADP formation","type":"exact"},{"name":"dADP synthesis","type":"exact"}],"termid":"GO:0006173"}


id: GO:0035634
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of exposure to a stilbenoid. Stilbenoids are secondary products of heartwood formation in trees that can act as phytoalexins. Stilbenoids are hydroxylated derivatives of stilbene. They belong to the family of phenylpropanoids and share most of their biosynthesis pathway with chalcones.","definition_xrefs":["GOC:yaf","Wikipedia:Stilbenoid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to chemical","termid":"GO:0042221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to stilbenoid","termid":"GO:0035634"}


id: MONDO:0044876
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete drug hypersensitivity syndrome (obsolete MONDO:0044876)","termid":"MONDO:0044876","xrefs":{"Monarch":{"xref_id":"0044876"}}}


id: PATO:0001154
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's length being notably higher than its width.","definition_xrefs":["WordNet:WordNet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongated","termid":"PATO:0001154"}


id: PBO:0061495
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nurim","termid":"PBO:0061495"}


id: GO:0016775
data:
  {"annotated_genes":["SJAG_02183","SJAG_01587","SJAG_00331"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[78230,65702,58122],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000155"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of a phosphorus-containing group from one compound (donor) to a nitrogenous group (acceptor).","definition_xrefs":["EC:2.7.3.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring phosphorus-containing groups","termid":"GO:0016772"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00331":null,"SJAG_01587":null,"SJAG_02183":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"phosphotransferase activity, nitrogenous group as acceptor","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null},"termid":"GO:0016775","terms_by_termid":{"GO:0000155":null}}


id: FYPO:0007425
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A DNA recombination phenotype observed in the vegetative growth phase of the life cycle in which gene conversion is normal (i.e. indistinguishably from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal metabolic process during vegetative growth","termid":"FYPO:0000859"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001312","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal gene conversion","synonyms":[{"name":"normal gene conversion during mitotic cell cycle","type":"related"},{"name":"normal gene conversion during vegetative growth","type":"exact"}],"termid":"FYPO:0007425"}


id: GO:1901019
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of calcium ion transmembrane transporter activity.","definition_xrefs":["GOC:TermGenie","GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of calcium ion transmembrane transporter activity (obsolete GO:1901019)","termid":"GO:1901019"}


id: SO:0002158
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene cassette array containing H- mating type specific information.","definition_xrefs":["PMID:18354497"],"direct_ancestors":[{"relation_name":"is_a","term_name":"silent_mating_type_cassette_array","termid":"SO:0001984"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mat3M","termid":"SO:0002158"}


id: PATO:0000710
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000710 time value (obsolete PATO:0000710)","termid":"PATO:0000710"}


id: PBO:0086144
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for normal metabolism of the rRNA primary transcript; nucleolar protein; proposed to be involved in ribosome biogenesis","termid":"PBO:0086144"}


id: PBO:0053777
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1023","termid":"PBO:0053777"}


id: GO:0070607
data:
  {"annotated_genes":["SJAG_02278","SJAG_00424","SJAG_04666","SJAG_00610"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95307,103211,89801,92791],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070610"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving (1->3)-alpha-D-glucans, compounds composed of glucose residues linked by (1->3)-alpha-D-glucosidic bonds, found in the walls of cells.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell wall macromolecule metabolic process","termid":"GO:0010981"},{"relation_name":"is_a","term_name":"regulation of (1->3)-alpha-glucan metabolic process","termid":"GO:0070605"},{"relation_name":"regulates","term_name":"cell wall (1->3)-alpha-glucan metabolic process","termid":"GO:0070597"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00424":null,"SJAG_00610":null,"SJAG_02278":null,"SJAG_04666":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"regulation of cell wall (1->3)-alpha-glucan metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of cell wall 1,3-alpha-glucan metabolic process","type":"exact"},{"name":"regulation of cell wall 1,3-alpha-glucan metabolism","type":"exact"},{"name":"regulation of cell wall alpha-1,3 glucan metabolic process","type":"exact"},{"name":"regulation of cell wall alpha-1,3 glucan metabolism","type":"exact"}],"termid":"GO:0070607","terms_by_termid":{"GO:0070610":null}}


id: MONDO:0004101
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A papillary carcinoma arising from the thyroid gland from multiple foci.","definition_xrefs":["NCIT:C37304"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thyroid gland papillary carcinoma","termid":"MONDO:0005075"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"multicentric papillary thyroid carcinoma","secondary_identifiers":["DOID:7086","MEDGEN:235340","UMLS:C1334817"],"synonyms":[{"name":"multicentric papillary thyroid carcinoma","type":"exact"},{"name":"multicentric papillary thyroid gland carcinoma","type":"exact"},{"name":"multicentric thyroid gland papillary carcinoma","type":"exact"}],"termid":"MONDO:0004101","xrefs":{"Monarch":{"xref_id":"0004101"}}}


id: PBO:0030775
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_sorbitol","termid":"PBO:0030775"}


id: MONDO:0005677
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spotted fever","termid":"MONDO:0001195"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rickettsia conorii infectious disease","secondary_identifiers":["EFO:0007179"],"termid":"MONDO:0005677","xrefs":{"Monarch":{"xref_id":"0005677"}}}


id: PBO:0086488
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative oxidoreductase; required for cell viability","termid":"PBO:0086488"}


id: PBO:0058269
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4647","termid":"PBO:0058269"}


id: MONDO:0008422
data:
  {"annotated_genes":["SJAG_01615"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85991],"is_not":false,"summary":null,"term":"MONDO:0008422"}]},"cv_name":"mondo","definition":"Autosomal dominant form of sideroblastic anemia.","definition_xrefs":["MONDO:patterns/autosomal_dominant"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"inherited sideroblastic anemia","termid":"MONDO:0020099"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01615":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002280"},{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0002280","MONDO:0000426","MONDO:0005570"],"is_obsolete":false,"name":"autosomal dominant sideroblastic anemia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:902781","OMIM:182170","UMLS:C4225428","DOID:0060335","GARD:18380","MESH:C567160"],"synonyms":[{"name":"SIDBA4","type":"related"},{"name":"anemia, sideroblastic, 4","type":"related"},{"name":"anemia, sideroblastic, autosomal dominant","type":"related"},{"name":"sideroblastic anemia, autosomal dominant","type":"exact"}],"termid":"MONDO:0008422","terms_by_termid":{"MONDO:0008422":null},"xrefs":{"Monarch":{"xref_id":"0008422"}}}


id: PBO:0002181
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-actinin","termid":"PBO:0002181"}


id: PBO:0046856
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fatty acid desaturase 6","termid":"PBO:0046856"}


id: GO:0035452
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The component of a plastid membrane consisting of gene products and protein complexes that are loosely bound to one of its surfaces, but not integrated into the hydrophobic region.","definition_xrefs":["GOC:dos","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extrinsic component of organelle membrane","termid":"GO:0031312"},{"relation_name":"part_of","term_name":"plastid membrane","termid":"GO:0042170"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"extrinsic component of plastid membrane","synonyms":[{"name":"extrinsic to plastid membrane","type":"narrow"},{"name":"peripheral to plastid membrane","type":"exact"}],"termid":"GO:0035452"}


id: MONDO:0020657
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"squamous cell carcinoma","termid":"MONDO:0005096"},{"relation_name":"is_a","term_name":"virus associated tumor","termid":"MONDO:0017341"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"human papillomavirus-related squamous cell carcinoma","secondary_identifiers":["UMLS:C1334057","MEDGEN:272726","NCIT:C27683"],"synonyms":[{"name":"HPV-related squamous cell carcinoma","type":"exact"},{"name":"human papilloma virus related squamous cell carcinoma","type":"exact"},{"name":"human papilloma virus-related squamous cell carcinoma","type":"exact"},{"name":"human papillomavirus-related squamous cell carcinoma","type":"exact"}],"termid":"MONDO:0020657","xrefs":{"Monarch":{"xref_id":"0020657"}}}


id: PBO:0079090
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Tyr (anticodon GTA) 5-3","termid":"PBO:0079090"}


id: GO:0102615
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: ent-cassa-12,15-diene + NADPH + O2 + H+ = 2alpha-hydroxy-ent-cassadiene + NADP + H2O.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete ent-cassadiene-C2-hydroxylase activity (obsolete GO:0102615)","termid":"GO:0102615"}


id: PBO:0043732
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit 6C pseudogene 11","termid":"PBO:0043732"}


id: FYPO:0001410
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of sulfide (S2-, also called acid labile sulfide) measured in a cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal level of substance in cell during vegetative growth","termid":"FYPO:0001316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001312","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"normal cellular sulfide level","synonyms":[{"name":"normal cellular acid labile sulfide level","type":"exact"},{"name":"normal cellular sulfide accumulation","type":"related"},{"name":"normal cellular sulfide ion level","type":"exact"},{"name":"normal cellular sulfide level during mitotic cell cycle","type":"related"},{"name":"normal cellular sulfide level during vegetative growth","type":"exact"},{"name":"normal cellular sulphide level","type":"exact"}],"termid":"FYPO:0001410"}


id: PBO:0090395
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein, G-patch type, splicing factor 45 ortholog","termid":"PBO:0090395"}


id: PBO:0052844
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 3-4, pseudogene","termid":"PBO:0052844"}


id: MONDO:0002347
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A drug dependence that involves the continued use of barbiturates despite problems related to use of the substance.","definition_xrefs":["DOID:2575"],"direct_ancestors":[{"relation_name":"is_a","term_name":"drug dependence","termid":"MONDO:0005303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"barbiturate dependence","secondary_identifiers":["SCTID:231472009","MEDGEN:572756","ICD9:304.13","ICD9:304.11","UMLS:C0338767"],"termid":"MONDO:0002347","xrefs":{"Monarch":{"xref_id":"0002347"}}}


id: PBO:0011113
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"merged SPNCRNA.994 with SPNCRNA.130","termid":"PBO:0011113"}


id: PBO:0045840
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 alpha 1 pseudogene 30","termid":"PBO:0045840"}


id: GO:2000214
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of proline metabolic process.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of glutamine family amino acid metabolic process","termid":"GO:0000820"},{"relation_name":"regulates","term_name":"proline metabolic process","termid":"GO:0006560"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006520"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0006520","GO:0008150"],"is_obsolete":false,"name":"regulation of proline metabolic process","synonyms":[{"name":"regulation of proline metabolism","type":"exact"}],"termid":"GO:2000214"}


id: GO:1900624
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of monocyte aggregation.","definition_xrefs":["GOC:TermGenie","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of monocyte aggregation","termid":"GO:1900623"},{"relation_name":"is_a","term_name":"negative regulation of leukocyte cell-cell adhesion","termid":"GO:1903038"},{"relation_name":"negatively_regulates","term_name":"monocyte aggregation","termid":"GO:0070487"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"negatively_regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"negative regulation of monocyte aggregation","synonyms":[{"name":"down regulation of monocyte aggregation","type":"exact"},{"name":"down regulation of mononuclear phagocyte aggregation","type":"exact"},{"name":"down-regulation of monocyte aggregation","type":"exact"},{"name":"down-regulation of mononuclear phagocyte aggregation","type":"exact"},{"name":"downregulation of monocyte aggregation","type":"exact"},{"name":"downregulation of mononuclear phagocyte aggregation","type":"exact"},{"name":"inhibition of monocyte aggregation","type":"narrow"},{"name":"inhibition of mononuclear phagocyte aggregation","type":"exact"},{"name":"negative regulation of mononuclear phagocyte aggregation","type":"exact"}],"termid":"GO:1900624"}


id: PBO:0017519
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NEDD8 activating enzyme E1-type Uba3","termid":"PBO:0017519"}


id: GO:0071602
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of phytosphingosine, (2S,3S,4R)-2-aminooctadecane-1,3,4-triol.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phytosphingosine metabolic process","termid":"GO:0006671"},{"relation_name":"is_a","term_name":"polyol biosynthetic process","termid":"GO:0046173"},{"relation_name":"is_a","term_name":"sphingoid biosynthetic process","termid":"GO:0046520"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"phytosphingosine biosynthetic process","synonyms":[{"name":"phytosphingosine anabolism","type":"exact"},{"name":"phytosphingosine biosynthesis","type":"exact"},{"name":"phytosphingosine formation","type":"exact"},{"name":"phytosphingosine synthesis","type":"exact"}],"termid":"GO:0071602"}


id: MONDO:0011366
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm that arises from the ovary and originates from germ cells. Representative examples include teratoma, embryonal carcinoma, yolk sac tumor, and dysgerminoma.","definition_xrefs":["NCIT:C3873"],"direct_ancestors":[{"relation_name":"is_a","term_name":"germ cell tumor","termid":"MONDO:0005040"},{"relation_name":"is_a","term_name":"ovarian neoplasm","termid":"MONDO:0021068"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ovarian germ cell tumor","secondary_identifiers":["MEDGEN:65958","ICD9:239.5","ONCOTREE:OGCT","SCTID:237059008","OMIM:603737","EFO:1000419","UMLS:C0238324","DOID:2156"],"synonyms":[{"name":"germ cell neoplasm of ovary","type":"exact"},{"name":"germ cell neoplasm of the ovary","type":"exact"},{"name":"germ cell tumor of ovary","type":"exact"},{"name":"germ cell tumor of the ovary","type":"exact"},{"name":"germ cell tumour of ovary","type":"exact"},{"name":"germ cell tumour of the ovary","type":"exact"},{"name":"ovarian germ cell cancer","type":"related"},{"name":"ovarian germ cell neoplasm","type":"exact"},{"name":"ovarian germ cell tumor","type":"exact"},{"name":"ovary germ cell tumor","type":"exact"},{"name":"ovary germ cell tumour","type":"exact"}],"termid":"MONDO:0011366","xrefs":{"Monarch":{"xref_id":"0011366"}}}


id: PBO:0053299
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lin-7 homolog A, crumbs cell polarity complex component","termid":"PBO:0053299"}


id: GO:0004201
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the release of interleukin 1-beta by specific cleavage of Asp116-Ala117 and Asp27-Gly28 bonds in precursor. Enzymes with this function can also hydrolyze the terminal bond in the small-molecule substrate, Ac-Tyr-Val-Ala-Asp-NHMec.","definition_xrefs":["EC:3.4.22.36"],"gene_count":0,"genotype_count":0,"name":"obsolete caspase-1 activity (obsolete GO:0004201)","synonyms":[{"name":"ICE","type":"broad"},{"name":"caspase-1 activity","type":"exact"}],"termid":"GO:0004201"}


id: GO:0141190
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A G protein-coupled receptor signaling pathway that starts with an opsin molecule being activated by a photon. Opsins include rhodopsin and others visual receptors bind heterotrimeric transducin G proteins upon activation. Activated transducin alpha-subunit activates cGMP phosphodiesterase, which breaks down cGMP. The decrease in cGMP concentration leads to closure of cGMP-gated (CNG) channels, blockage of Na+ influx, and hyperpolarization of photoreceptor plasma membrane, leading to transmission of signal through synapses. The signal is terminated by phosphorylation of the C-terminal tail of rhodopsin by rhodopsin kinase to allow arrestin to bind and block G protein binding. Typical examples are rhabdomeric photoreceptors in the eyes of deuterostomes.","definition_xrefs":["PMID:36499010","PMID:19720651","PMID:36272560","PMID:37159291"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled opsin signaling pathway","termid":"GO:0016056"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"transducin-mediated opsin signaling pathway","synonyms":[{"name":"Gt-mediated opsin signaling pathway","type":"exact"},{"name":"cGMP-mediated opsin signaling pathway","type":"exact"},{"name":"cGMP-mediated rhodopsin signaling pathway","type":"narrow"},{"name":"ciliary opsin-mediated signaling pathway","type":"exact"},{"name":"cyclic-GMP-mediated opsin signaling pathway","type":"exact"},{"name":"cyclic-nucleotide-mediated opsin signaling pathway","type":"exact"}],"termid":"GO:0141190"}


id: PATO:0000059
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A parental quality inhering in a bearer by virtue of exhibiting the characteristic of a parent.","definition_xrefs":["WordNet:WordNet"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000059 parental quality (obsolete PATO:0000059)","synonyms":[{"name":"parental type","type":"exact"}],"termid":"PATO:0000059"}


id: MONDO:0100279
data:
  {"annotated_genes":["SJAG_02788","SJAG_04146"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87562,87563],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013967"}]},"cv_name":"mondo","definition":"Any peroxisome biogenesis disorder in which the cause of the disease is a mutation in the PEX11B gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Zellweger spectrum disorders","termid":"MONDO:0019609"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02788":null,"SJAG_04146":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0019053"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0019053","MONDO:0006025","MONDO:0005244","MONDO:0005559"],"is_obsolete":false,"name":"peroxisome biogenesis disorder due to PEX11B defect","references_by_uniquename":{"PB_REF:0000006":null},"synonyms":[{"name":"PEX11B related peroxisome biogenesis disorder","type":"exact"},{"name":"peroxisome biogenesis disorder due to PEX11B defect","type":"exact"}],"termid":"MONDO:0100279","terms_by_termid":{"MONDO:0013967":null},"xrefs":{"Monarch":{"xref_id":"0100279"}}}


id: GO:1900032
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of trichome patterning.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell communication","termid":"GO:0010646"},{"relation_name":"is_a","term_name":"regulation of signaling","termid":"GO:0023051"},{"relation_name":"is_a","term_name":"regulation of cell differentiation","termid":"GO:0045595"},{"relation_name":"is_a","term_name":"regulation of multicellular organismal process","termid":"GO:0051239"},{"relation_name":"regulates","term_name":"trichome patterning","termid":"GO:0048629"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of trichome patterning","synonyms":[{"name":"regulation of trichome distribution","type":"broad"},{"name":"regulation of trichome pattern biosynthesis","type":"exact"},{"name":"regulation of trichome pattern formation","type":"exact"},{"name":"regulation of trichome pattern specification","type":"related"},{"name":"regulation of trichome spacing","type":"exact"}],"termid":"GO:1900032"}


id: PBO:0087483
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of cleavage factor I; cleavage factor I is a five-subunit complex required for the cleavage and polyadenylation of pre-mRNA 3' ends; RRM-containing heteronuclear RNA binding protein and hnRNPA/B family member that binds to poly (A) signal sequences; required for genome stability; plays a role in copper homeostasis","termid":"PBO:0087483"}


id: GO:0045752
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the Tl signaling pathway.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of Toll signaling pathway","termid":"GO:0008592"},{"relation_name":"is_a","term_name":"positive regulation of signal transduction","termid":"GO:0009967"},{"relation_name":"positively_regulates","term_name":"Toll signaling pathway","termid":"GO:0008063"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of Toll signaling pathway","synonyms":[{"name":"activation of Toll signaling pathway","type":"narrow"},{"name":"positive regulation of Tl signaling pathway","type":"exact"},{"name":"positive regulation of Tl signalling pathway","type":"exact"},{"name":"stimulation of Toll signaling pathway","type":"narrow"},{"name":"up regulation of Toll signaling pathway","type":"exact"},{"name":"up-regulation of Toll signaling pathway","type":"exact"},{"name":"upregulation of Toll signaling pathway","type":"exact"}],"termid":"GO:0045752"}


id: MONDO:0003428
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A hemangioma arising from the brain.","definition_xrefs":["NCIT:C7739"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracranial hemangioma","termid":"MONDO:0002328"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brain hemangioma","secondary_identifiers":["MEDGEN:116075","DOID:5393","UMLS:C0238814"],"synonyms":[{"name":"brain angioma","type":"exact"},{"name":"brain hemangioma","type":"exact"}],"termid":"MONDO:0003428","xrefs":{"Monarch":{"xref_id":"0003428"}}}


id: GO:0009742
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals mediated by the detection of brassinosteroid.","definition_xrefs":["GOC:sm","PMID:16699538"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell surface receptor signaling pathway","termid":"GO:0007166"},{"relation_name":"is_a","term_name":"steroid hormone receptor signaling pathway","termid":"GO:0043401"},{"relation_name":"part_of","term_name":"cellular response to brassinosteroid stimulus","termid":"GO:0071367"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"brassinosteroid mediated signaling pathway","synonyms":[{"name":"brassinosteroid mediated signalling","type":"exact"}],"termid":"GO:0009742"}


id: PBO:0076561
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TBC1 domain family member 3B","termid":"PBO:0076561"}


id: MONDO:0013251
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Birbeck granule deficiency","secondary_identifiers":["OMIM:613393","MEDGEN:462007","UMLS:C3150657"],"synonyms":[{"name":"Birbeck granule deficiency","type":"exact"},{"name":"Birbeck granules, absence of","type":"related"}],"termid":"MONDO:0013251","xrefs":{"Monarch":{"xref_id":"0013251"}}}


id: PBO:0058649
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6778","termid":"PBO:0058649"}


id: MONDO:0014587
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any congenital myasthenic syndrome in which the cause of the disease is a mutation in the MUSK gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"postsynaptic congenital myasthenic syndrome","termid":"MONDO:0020344"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"congenital myasthenic syndrome 9","secondary_identifiers":["GARD:16088","DOID:0110670","OMIM:616325","MEDGEN:895641","UMLS:C4225368"],"synonyms":[{"name":"CMS9","type":"exact"},{"name":"MUSK congenital myasthenic syndrome","type":"exact"},{"name":"congenital myasthenic syndrome 9, associated with acetylcholine receptor deficiency","type":"exact"},{"name":"congenital myasthenic syndrome caused by mutation in MUSK","type":"exact"},{"name":"congenital myasthenic syndrome type 9","type":"exact"},{"name":"myasthenic syndrome, congenital, 9, associated with acetylcholine receptor deficiency","type":"related"}],"termid":"MONDO:0014587","xrefs":{"Monarch":{"xref_id":"0014587"}}}


id: GO:0032803
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of low-density lipoprotein particle receptors.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein catabolic process","termid":"GO:0042176"},{"relation_name":"is_a","term_name":"regulation of receptor catabolic process","termid":"GO:2000644"},{"relation_name":"regulates","term_name":"low-density lipoprotein particle receptor catabolic process","termid":"GO:0032802"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0030163"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0030163"],"is_obsolete":false,"name":"regulation of low-density lipoprotein particle receptor catabolic process","synonyms":[{"name":"regulation of LDLr catabolic process","type":"exact"},{"name":"regulation of LDLr catabolism","type":"exact"},{"name":"regulation of low-density lipoprotein receptor breakdown","type":"exact"},{"name":"regulation of low-density lipoprotein receptor catabolic process","type":"exact"},{"name":"regulation of low-density lipoprotein receptor catabolism","type":"exact"},{"name":"regulation of low-density lipoprotein receptor degradation","type":"exact"}],"termid":"GO:0032803"}


id: MONDO:0042494
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A melanoma that occurs during childhood.","definition_xrefs":["NCIT:C131506"],"direct_ancestors":[{"relation_name":"is_a","term_name":"melanoma","termid":"MONDO:0005105"},{"relation_name":"is_a","term_name":"childhood malignant neoplasm","termid":"MONDO:0006517"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"childhood malignant melanoma","secondary_identifiers":["GARD:91","MEDGEN:1374316","UMLS:C4329660"],"synonyms":[{"name":"childhood melanoma","type":"exact"},{"name":"childhood melanoma (disease)","type":"exact"},{"name":"malignant melanoma, childhood","type":"related"},{"name":"melanoma (disease) of childhood","type":"exact"},{"name":"paediatric melanoma (disease)","type":"exact"},{"name":"pediatric melanoma (disease)","type":"exact"}],"termid":"MONDO:0042494","xrefs":{"Monarch":{"xref_id":"0042494"}}}


id: PBO:0026975
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-altered_RNA_level_in_mitochondrion","termid":"PBO:0026975"}


id: GO:0072409
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of events in which information about a biological process or quality is received and converted into a molecular signal, contributing to a meiotic cell cycle checkpoint.","definition_xrefs":["GOC:mah","GOC:mtg_cell_cycle"],"gene_count":0,"genotype_count":0,"name":"obsolete detection of stimulus involved in meiotic cell cycle checkpoint (obsolete GO:0072409)","synonyms":[{"name":"meiotic cell cycle checkpoint sensor mechanism","type":"related"},{"name":"meiotic cell cycle checkpoint sensor process","type":"related"},{"name":"sensing involved in meiotic cell cycle checkpoint","type":"related"}],"termid":"GO:0072409"}


id: PBO:0085628
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in Fe-S cluster transfer to mitochondrial clients; protects [4Fe-4S] clusters from damage due to oxidative stress; acts along with Bol3 at a late step in the transfer of [4Fe-4S] clusters from the ISA complex to client proteins; Fe-S loaded homodimer at steady state; similar to NifU, a bacterial protein required for Fe/S cluster maturation; ortholog of the human NFU1, mutations of which are associated with Multiple Mitochondria Dysfunctions Syndrome (MMDS1)","termid":"PBO:0085628"}


id: FYPO:0008203
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the trimethylation of lysine at position 9 of histone H3 at the centromere inner repeat region is normal (i.e. indistinguishable from wild type).","direct_ancestors":[{"relation_name":"is_a","term_name":"normal histone H3-K9 methylation at centromere inner repeat during vegetative growth","termid":"FYPO:0006683"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0001312","FYPO:0001320"],"is_obsolete":false,"name":"normal histone H3-K9 trimethylation at centromere inner repeat during vegetative growth","termid":"FYPO:0008203"}


id: PBO:0069930
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1223, pseudogene","termid":"PBO:0069930"}


id: PBO:0047490
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ferrochelatase","termid":"PBO:0047490"}


id: PATO:0002506
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A surface feature shape quality inhering in a bearer by virtue of the bearer's not having undulating edges forming lobes.","definition_xrefs":["PATOC:DOS"],"direct_ancestors":[{"relation_name":"is_a","term_name":"surface feature shape","termid":"PATO:0001925"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alobate","termid":"PATO:0002506"}


id: GO:0102946
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: UDP-alpha-D-glucose + soyasapogenol E = UDP + a soyasapogenol E monoglucoside.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete soyasapogenol E UDP-glucosyltransferase activity (obsolete GO:0102946)","termid":"GO:0102946"}


id: PBO:0085355
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phosphomannomutase; involved in synthesis of GDP-mannose and dolichol-phosphate-mannose; required for folding and glycosylation of secretory proteins in the ER lumen; human homolog PMM2 complements yeast mutants","termid":"PBO:0085355"}


id: PBO:0000982
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA snR96","termid":"PBO:0000982"}


id: PBO:0002691
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"triose phosphate transporter (predicted)","termid":"PBO:0002691"}


id: MONDO:0015899
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Any of the forms of primary aldosteronism that have a rare incidence.","definition_xrefs":["MONDO:patterns/rare"],"gene_count":0,"genotype_count":0,"name":"obsolete rare primary hyperaldosteronism (obsolete MONDO:0015899)","secondary_identifiers":["Orphanet:181415"],"synonyms":[{"name":"rare Conn syndrome","type":"exact"},{"name":"rare Conn's syndrome","type":"exact"},{"name":"rare primary aldosteronism","type":"exact"}],"termid":"MONDO:0015899","xrefs":{"Monarch":{"xref_id":"0015899"}}}


id: SO:0000152
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Yeast Artificial Chromosome, a vector constructed from the telomeric, centromeric, and replication origin sequences needed for replication in yeast cells.","definition_xrefs":["SO:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vector_replicon","termid":"SO:0000440"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"YAC","synonyms":[{"name":"yeast artificial chromosome","type":"exact"}],"termid":"SO:0000152"}


id: MOD:02023
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a residue amino group with a cervonoylamino group.","direct_ancestors":[{"relation_name":"is_a","term_name":"N-acylated residue","termid":"MOD:00670"},{"relation_name":"is_a","term_name":"cervonoylated residue","termid":"MOD:02024"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:01155"}],"interesting_parent_ids":["MOD:01155"],"is_obsolete":false,"name":"N-cervonoylated residue","termid":"MOD:02023"}


id: GO:0005798
data:
  {"annotated_genes":["SJAG_01927","SJAG_02240","SJAG_00669","SJAG_01809","SJAG_03368","SJAG_02160","SJAG_04402","SJAG_01508","SJAG_01025","SJAG_04474","SJAG_02012","SJAG_04565","SJAG_00916","SJAG_00192","SJAG_04609","SJAG_02234","SJAG_04517","SJAG_00379","SJAG_02282","SJAG_04569","SJAG_04002","SJAG_00092","SJAG_02482","SJAG_04070","SJAG_04391","SJAG_01285"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[95393,115378],"is_not":false,"summary":null,"term":"GO:0005798"},{"annotations":[113167,78133,113377,62265],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030121"},{"annotations":[58833,65696],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030130"},{"annotations":[107491,64431,71299,78413,93592,73904,78758,80262,98808],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030126"},{"annotations":[91971,99879,114519,93505],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030137"},{"annotations":[98120,96410],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030663"},{"annotations":[77668,72331],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0034044"},{"annotations":[100555],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030140"}]},"cv_name":"cellular_component","definition":"Any vesicle associated with the Golgi complex and involved in mediating transport within the Golgi or between the Golgi and other parts of the cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic vesicle","termid":"GO:0031410"}],"gene_count":26,"genes_by_uniquename":{"SJAG_00092":null,"SJAG_00192":null,"SJAG_00379":null,"SJAG_00669":null,"SJAG_00916":null,"SJAG_01025":null,"SJAG_01285":null,"SJAG_01508":null,"SJAG_01809":null,"SJAG_01927":null,"SJAG_02012":null,"SJAG_02160":null,"SJAG_02234":null,"SJAG_02240":null,"SJAG_02282":null,"SJAG_02482":null,"SJAG_03368":null,"SJAG_04002":null,"SJAG_04070":null,"SJAG_04391":null,"SJAG_04402":null,"SJAG_04474":null,"SJAG_04517":null,"SJAG_04565":null,"SJAG_04569":null,"SJAG_04609":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0031410"],"is_obsolete":false,"name":"Golgi-associated vesicle","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["NIF_Subcellular:sao819927218"],"synonyms":[{"name":"Golgi vesicle","type":"related"},{"name":"vesicular component","type":"related"}],"termid":"GO:0005798","terms_by_termid":{"GO:0005798":null,"GO:0030121":null,"GO:0030126":null,"GO:0030130":null,"GO:0030137":null,"GO:0030140":null,"GO:0030663":null,"GO:0034044":null}}


id: PATO:0000936
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's terminating abruptly by having or as if having an end or point cut off.","definition_xrefs":["thefreedictionary.com:thefreedictionary.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"truncated","synonyms":[{"name":"truncate","type":"exact"}],"termid":"PATO:0000936"}


id: GO:1901012
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of (S)-reticuline.","definition_xrefs":["PMID:22725256","GOC:yaf","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benzyl isoquinoline alkaloid biosynthetic process","termid":"GO:0009708"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"(S)-reticuline biosynthetic process","synonyms":[{"name":"(S)-reticuline anabolism","type":"exact"},{"name":"(S)-reticuline biosynthesis","type":"exact"},{"name":"(S)-reticuline formation","type":"exact"},{"name":"(S)-reticuline synthesis","type":"exact"}],"termid":"GO:1901012"}


id: PBO:0038355
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_ligand","termid":"PBO:0038355"}


id: FYPO:0005993
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A metabolism phenotype observed in the vegetative growth phase of the life cycle in which translation in the cytoplasm is normal (i.e. indistinguishable from wild type). Translation is the synthesis of a protein using the sequence of a mature mRNA molecule to specify the sequence of amino acids in a polypeptide chain.","definition_xrefs":["PomBase:mah","GO:0002181"],"direct_ancestors":[{"relation_name":"is_a","term_name":"translation phenotype","termid":"FYPO:0000291"},{"relation_name":"is_a","term_name":"normal metabolic process during vegetative growth","termid":"FYPO:0000859"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0001312","FYPO:0001320"],"is_obsolete":false,"name":"normal cytoplasmic translation","synonyms":[{"name":"normal cytoplasmic protein biosynthesis","type":"exact"},{"name":"normal cytoplasmic protein synthesis","type":"exact"},{"name":"normal cytoplasmic translation during mitotic cell cycle","type":"related"},{"name":"normal cytoplasmic translation during vegetative growth","type":"exact"}],"termid":"FYPO:0005993"}


id: PBO:0080129
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vesicle associated membrane protein 8","termid":"PBO:0080129"}


id: FYPO:0000060
data:
  {"alleles_by_uniquename":{"SJAG_04332:allele-1":{"allele_type":"amino_acid_mutation","description":"I30T,T572P","gene_uniquename":"SJAG_04332","name":"cdc25-D9","uniquename":"SJAG_04332:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[119568],"is_not":false,"rel_names":["is_a","has_part"],"summary":null,"term":"FYPO:0007701"}]},"cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which a cell contains a single nucleus.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular physical quality phenotype during vegetative growth","termid":"FYPO:0001321"},{"relation_name":"is_a","term_name":"mononucleate","termid":"FYPO:0002731"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04332":null},"genotype_count":1,"genotypes_by_uniquename":{"cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cdc25-D9(I30T,T572P aa)","display_uniquename":"cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04332:allele-1","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"mononucleate vegetative cell","references_by_uniquename":{"PMID:25866389":null},"single_locus_annotated_genes":["SJAG_04332"],"single_locus_genotype_uniquenames":["cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"mononucleate during vegetative growth","type":"exact"},{"name":"mononucleate vegetative cell during mitotic cell cycle","type":"related"}],"termid":"FYPO:0000060","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000137":null,"FYPO:0007701":null,"FYPO_EXT:0000001":null}}


id: MONDO:0800296
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microcornea, rod-cone dystrophy, cataract, and posterior staphyloma 2","secondary_identifiers":["MEDGEN:1763512","UMLS:C5435648"],"synonyms":[{"name":"MRCS2","type":"exact"}],"termid":"MONDO:0800296","xrefs":{"Monarch":{"xref_id":"0800296"}}}


id: PBO:0030797
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_localization_to_mitotic_spindle_pole_body","termid":"PBO:0030797"}


id: PATO:0001744
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A radiation quality inhering in a bearer by virtue of what the bearer receives as a result of being exposed to ionizing radiation.","definition_xrefs":["hps:hps"],"direct_ancestors":[{"relation_name":"is_a","term_name":"radiation quality","termid":"PATO:0001739"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"radiation exposure","termid":"PATO:0001744"}


id: PBO:0048707
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycine receptor alpha 4 (pseudogene)","termid":"PBO:0048707"}


id: FYPO:0003994
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of succinate dehydrogenase activity is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal catalytic activity","termid":"FYPO:0000660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000652","FYPO:0000257"],"is_obsolete":false,"name":"normal succinate dehydrogenase activity","termid":"FYPO:0003994"}


id: PBO:0017908
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NMS complex subunit Mis12","termid":"PBO:0017908"}


id: MONDO:0018297
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete hypotonia-speech impairment-severe cognitive delay syndrome (obsolete MONDO:0018297)","termid":"MONDO:0018297","xrefs":{"Monarch":{"xref_id":"0018297"}}}


id: PBO:0002201
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic cohesin complex associated protein Moa1","termid":"PBO:0002201"}


id: MONDO:0018767
data:
  {"annotated_genes":["SJAG_04608"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86380],"is_not":false,"summary":null,"term":"MONDO:0018767"}]},"cv_name":"mondo","definition":"Any trimethylaminuria in which the cause of the disease is a mutation in the FMO3 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"inborn disorder of amino acid and other organic acid metabolism","termid":"MONDO:0019189"},{"relation_name":"is_a","term_name":"trimethylaminuria","termid":"MONDO:0011182"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04608":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"severe primary trimethylaminuria","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:602079","UMLS:C5575503","MESH:C536561","Orphanet:468726","MEDGEN:1814174","GARD:6447","HP:0003614","DOID:0080361"],"synonyms":[{"name":"TMAU","type":"related"},{"name":"TMAuria","type":"related"},{"name":"fish malodor syndrome","type":"related"},{"name":"fish odor syndrome","type":"related"},{"name":"fish odour syndrome","type":"related"},{"name":"fish-odor syndrome","type":"related"},{"name":"stale fish syndrome","type":"related"},{"name":"trimethylaminuria","type":"broad"}],"termid":"MONDO:0018767","terms_by_termid":{"MONDO:0018767":null},"xrefs":{"Monarch":{"xref_id":"0018767"}}}


id: PBO:0071573
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L35 pseudogene 2","termid":"PBO:0071573"}


id: PR:Q9USQ6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- syj2 gene.","definition_xrefs":["UniProtKB:Q9USQ6","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol-1,4,5-trisphosphate 5-phosphatase 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC577.13","synonyms":[{"name":"Spom972h-syj2","type":"exact"},{"name":"synaptojanin-like protein 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9USQ6"}


id: GO:0003016
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process carried out by the organs or tissues of the respiratory system. The respiratory system is an organ system responsible for respiratory gaseous exchange.","definition_xrefs":["GOC:tb","GOC:dph","GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"system process","termid":"GO:0003008"},{"relation_name":"part_of","term_name":"respiratory gaseous exchange by respiratory system","termid":"GO:0007585"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"respiratory system process","secondary_identifiers":["GO:0010802"],"synonyms":[{"name":"respiratory gaseous exchange","type":"exact"}],"termid":"GO:0003016"}


id: PBO:0001373
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6.1.1.7","termid":"PBO:0001373"}


id: PR:Q9UUH0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A metallophosphoesterase 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00144","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C630.12 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC630.12","secondary_identifiers":["UniProtKB:Q9UUH0"],"synonyms":[{"name":"Spom972h-MPPE1","type":"exact"}],"termid":"PR:Q9UUH0"}


id: MONDO:0020613
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete blood group--lke (obsolete MONDO:0020613)","secondary_identifiers":["OMIM:111130"],"synonyms":[{"name":"BLOOD GROUP--LKE","type":"related"},{"name":"Blood Group--Luke","type":"related"},{"name":"Blood Group--Luke, Formerly","type":"related"},{"name":"LKE","type":"related"}],"termid":"MONDO:0020613","xrefs":{"Monarch":{"xref_id":"0020613"}}}


id: GO:0141192
data:
  {"annotated_genes":["SJAG_01352"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[97366],"is_not":false,"summary":null,"term":"GO:0141192"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 ATP + H+ = diphosphate + P(1),P(4)-bis(5'-adenosyl)tetraphosphate.","definition_xrefs":["PMID:16884494","PMID:19710017","RHEA:34935","PMID:27398309"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenylyltransferase activity","termid":"GO:0070566"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01352":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016779","GO:0016740"],"is_obsolete":false,"name":"ATP:ATP adenylyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-9825790"],"synonyms":[{"name":"adenine triphosphate adenylyltransferase activity","type":"related"}],"termid":"GO:0141192","terms_by_termid":{"GO:0141192":null}}


id: GO:0045332
data:
  {"annotated_genes":["SJAG_03050","SJAG_01731","SJAG_02516","SJAG_02132","SJAG_00589","SJAG_02581","SJAG_00230","SJAG_06440","SJAG_00587","SJAG_02957","SJAG_02114","SJAG_00669","SJAG_03209","SJAG_04734","SJAG_01095","SJAG_05209","SJAG_01945","SJAG_00576","SJAG_01470","SJAG_00018","SJAG_02897","SJAG_02943"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[60066,72517,73238,73398,74903,75161,90879,90880,90881,90882,90883,90884,90885,90886,90887,99833,101645,102575,109888],"is_not":false,"summary":null,"term":"GO:0045332"},{"annotations":[102696,68999],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140331"},{"annotations":[73574],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0017121"}]},"cv_name":"biological_process","definition":"The movement of a phospholipid molecule from one leaflet of a membrane bilayer to the opposite leaflet.","definition_xrefs":["PMID:16452632","PMID:20043909","PMID:20302864","ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid transport","termid":"GO:0015914"},{"relation_name":"is_a","term_name":"lipid translocation","termid":"GO:0034204"}],"gene_count":22,"genes_by_uniquename":{"SJAG_00018":null,"SJAG_00230":null,"SJAG_00576":null,"SJAG_00587":null,"SJAG_00589":null,"SJAG_00669":null,"SJAG_01095":null,"SJAG_01470":null,"SJAG_01731":null,"SJAG_01945":null,"SJAG_02114":null,"SJAG_02132":null,"SJAG_02516":null,"SJAG_02581":null,"SJAG_02897":null,"SJAG_02943":null,"SJAG_02957":null,"SJAG_03050":null,"SJAG_03209":null,"SJAG_04734":null,"SJAG_05209":null,"SJAG_06440":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0008150","GO:0061024","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"phospholipid translocation","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"secondary_identifiers":["Reactome:R-HSA-1660537","Reactome:R-HSA-1660508","Reactome:R-HSA-1660524","Reactome:R-HSA-1660502","Reactome:R-HSA-1660510"],"synonyms":[{"name":"flippase","type":"related"},{"name":"phospholipid scrambling","type":"related"}],"termid":"GO:0045332","terms_by_termid":{"GO:0017121":null,"GO:0045332":null,"GO:0140331":null}}


id: PBO:0028006
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_actomyosin_contractile_ring_contraction","termid":"PBO:0028006"}


id: PBO:0082544
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cell wall protein that contains a putative GPI-attachment site; secreted by regenerating protoplasts; up-regulated by activation of the cell integrity pathway, as mediated by Rlm1p; upregulated by cell wall damage via disruption of FKS1; PST1 has a paralog, ECM33, that arose from the whole genome duplication","termid":"PBO:0082544"}


id: PBO:0040183
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"asporin","termid":"PBO:0040183"}


id: PBO:0057255
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 466","termid":"PBO:0057255"}


id: SO:0002030
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"One of two segments of homology found at all three mating loci (HML, MAT and HMR).","definition_xrefs":["SGD:jd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mating_type_region_motif","termid":"SO:0001999"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"X_region","synonyms":[{"name":"x-region","type":"exact"}],"termid":"SO:0002030"}


id: GO:0102763
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a ribonucleoside 5'-triphosphate + phytyl phosphate = a ribonucleoside 5'-diphosphate + phytyl diphosphate.","definition_xrefs":["RHEA:38099"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, phosphate group as acceptor","termid":"GO:0016776"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"phytyl-P kinase activity","secondary_identifiers":["MetaCyc:RXN-7763"],"termid":"GO:0102763"}


id: PBO:0042557
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin dependent kinase 20","termid":"PBO:0042557"}


id: GO:0043107
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in the controlled movement of a bacterial cell which is dependent on the presence of type IV pili. Includes social gliding motility and twitching motility.","definition_xrefs":["PMID:12704238","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell motility","termid":"GO:0048870"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"type IV pilus-dependent motility","synonyms":[{"name":"TFP-dependent motility","type":"exact"},{"name":"TFP-dependent movement","type":"exact"},{"name":"social gliding motility","type":"narrow"},{"name":"twitching motility","type":"narrow"},{"name":"type 4 pilus-dependent motility","type":"exact"},{"name":"type four pilus-dependent motility","type":"exact"}],"termid":"GO:0043107"}


id: PBO:0074303
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLX1B-SULT1A4 readthrough (NMD candidate)","termid":"PBO:0074303"}


id: PBO:0080785
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"XK related, Y-linked pseudogene 5","termid":"PBO:0080785"}


id: PBO:0041935
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CBX3 pseudogene 3","termid":"PBO:0041935"}


id: FYPO:0004452
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which transcription from a calcineurin-dependent response element (CDRE)-containing promoter is decreased following a calcium ion stimulus.","definition_xrefs":["PMID:25081204","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased transcription from RNA polymerase II promoter during vegetative growth","termid":"FYPO:0005229"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000294","FYPO:0006551","FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"decreased transcription from CDRE promoter in response to calcium ion","synonyms":[{"name":"decreased transcription from CDRE promoter in response to calcium ion during mitotic cell cycle","type":"related"},{"name":"decreased transcription from CDRE promoter in response to calcium ion during vegetative growth","type":"exact"},{"name":"reduced transcription from CDRE promoter in response to calcium ion","type":"exact"}],"termid":"FYPO:0004452"}


id: PBO:0072269
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S21 pseudogene 7","termid":"PBO:0072269"}


id: PR:O13995
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- dap1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13995"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 regulator dap1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC25B8.01","synonyms":[{"name":"Spom972h-dap1","type":"exact"}],"termid":"PR:O13995"}


id: PBO:0090539
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA translocase Rhp16b","termid":"PBO:0090539"}


id: GO:0110085
data:
  {"annotated_genes":["SJAG_00229","SJAG_04887","SJAG_03704","SJAG_00082","SJAG_05285","SJAG_04621","SJAG_03596","SJAG_00845","SJAG_00279","SJAG_04498","SJAG_02864","SJAG_00268","SJAG_02320","SJAG_02278","SJAG_00677","SJAG_00228","SJAG_02431","SJAG_04077","SJAG_03581","SJAG_00185","SJAG_00750","SJAG_03564","SJAG_03625","SJAG_02266","SJAG_03631","SJAG_00807","SJAG_03887","SJAG_02838","SJAG_03374","SJAG_01665","SJAG_03703","SJAG_04703","SJAG_02169","SJAG_03681","SJAG_01889","SJAG_03088","SJAG_01943","SJAG_03025","SJAG_03145","SJAG_04509","SJAG_02831","SJAG_02392","SJAG_01787","SJAG_00663","SJAG_00938","SJAG_01114","SJAG_04375","SJAG_01143","SJAG_04597","SJAG_04461","SJAG_02737","SJAG_03379","SJAG_01277"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[75310,76722,88243,89686,90175,91081,92902,94187,94940,98642,101621,101628,105722,107262,111138,116194,116278,118019,119218,119584,119586,119589,119591,119593,119869],"is_not":false,"summary":null,"term":"GO:0110085"},{"annotations":[100897,105514,101062,118254,109434],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0120106"},{"annotations":[104057,96205,109435,112686,113740,106575,88630,97554,101292,111178,95305,118255,118272,90347,96682,91128,94768],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0120105"},{"annotations":[101319,92686,117413,98385,98006,100478,108506,107412,80120,109436,98254,78606,117320,118256,104280],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0120104"}]},"cv_name":"cellular_component","definition":"A cytoskeletal structure composed of actin filaments, myosin, and myosin-associated proteins that forms beneath the plasma membrane of many cells, including animal cells and yeast cells, in a plane perpendicular to the axis of the mitotic spindle, i.e. the cell division plane. Ring contraction is associated with centripetal growth of the membrane that divides the cytoplasm of the two future daughter cells. In animal cells, the mitotic contractile ring is located inside the plasma membrane at the location of the cleavage furrow. In budding fungal cells, e.g. mitotic S. cerevisiae cells, the mitotic contractile ring forms beneath the plasma membrane at the mother-bud neck before mitosis.","definition_xrefs":["PMID:27505246","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actomyosin contractile ring","termid":"GO:0005826"}],"gene_count":53,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_00185":null,"SJAG_00228":null,"SJAG_00229":null,"SJAG_00268":null,"SJAG_00279":null,"SJAG_00663":null,"SJAG_00677":null,"SJAG_00750":null,"SJAG_00807":null,"SJAG_00845":null,"SJAG_00938":null,"SJAG_01114":null,"SJAG_01143":null,"SJAG_01277":null,"SJAG_01665":null,"SJAG_01787":null,"SJAG_01889":null,"SJAG_01943":null,"SJAG_02169":null,"SJAG_02266":null,"SJAG_02278":null,"SJAG_02320":null,"SJAG_02392":null,"SJAG_02431":null,"SJAG_02737":null,"SJAG_02831":null,"SJAG_02838":null,"SJAG_02864":null,"SJAG_03025":null,"SJAG_03088":null,"SJAG_03145":null,"SJAG_03374":null,"SJAG_03379":null,"SJAG_03564":null,"SJAG_03581":null,"SJAG_03596":null,"SJAG_03625":null,"SJAG_03631":null,"SJAG_03681":null,"SJAG_03703":null,"SJAG_03704":null,"SJAG_03887":null,"SJAG_04077":null,"SJAG_04375":null,"SJAG_04461":null,"SJAG_04498":null,"SJAG_04509":null,"SJAG_04597":null,"SJAG_04621":null,"SJAG_04703":null,"SJAG_04887":null,"SJAG_05285":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005938"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0070938"},{"rel_name":"part_of","termid":"GO:0015629"}],"interesting_parent_ids":["GO:0005938","GO:0005737","GO:0070938","GO:0015629","GO:0005575"],"is_obsolete":false,"name":"mitotic actomyosin contractile ring","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:25866389":null,"PMID:36148799":null},"termid":"GO:0110085","terms_by_termid":{"GO:0110085":null,"GO:0120104":null,"GO:0120105":null,"GO:0120106":null}}


id: PBO:0005343
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"urease accessory protein UREG (predicted)","termid":"PBO:0005343"}


id: PBO:0030446
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_phosphatase_activity","termid":"PBO:0030446"}


id: MONDO:0020308
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, genetic neurological disorder characterized by childhood to mid-adolescence onset of frequent, brief, diurnal simple partial seizures which usually begin with visual hallucinations (e.g. phosphenes) and/or ictal blindness and may associate non visual seizures (such as deviation of the eyes, oculoclonic seizures), forced eyelid closure and blinking and sensory hallucinations. Post-ictal headache is common while impairment of consciousness is rare.","definition_xrefs":["Orphanet:98816"],"direct_ancestors":[{"relation_name":"is_a","term_name":"self-limited childhood occipital epilepsy","termid":"MONDO:0007558"},{"relation_name":"is_a","term_name":"childhood-onset self-limited focal epilepsy syndrome","termid":"MONDO:0800502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"childhood occipital visual epilepsy","secondary_identifiers":["GARD:19582","MEDGEN:581521","UMLS:C0393677"],"synonyms":[{"name":"COVE","type":"exact"},{"name":"benign childhood occipital epilepsy, Gastaut type","type":"exact"},{"name":"childhood occipital epilepsy (Gastaut type)","type":"exact"},{"name":"late-onset benign childhood occipital epilepsy","type":"exact"}],"termid":"MONDO:0020308","xrefs":{"Monarch":{"xref_id":"0020308"}}}


id: PBO:0047598
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FH2 domain containing 1","termid":"PBO:0047598"}


id: MONDO:0002250
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A syndrome which occurs as a result of the occlusion of the basilar artery. It may be caused by atherosclerosis, embolism or hemorrhage. Clinical signs include dizziness, headache, vomiting, hemiparesis or hemiplegia, dysarthria, dysphagia, blurred vision and loss of consciousness. The clinical course is variable and is dependent upon the extent of the occlusion and the location of the clot along the basilar artery which determines the resultant neurologic impairment. Prognosis is dismal in cases where a complete occlusion occurs with rapid deterioration of neurological function.","definition_xrefs":["NCIT:C34413"],"direct_ancestors":[{"relation_name":"is_a","term_name":"arterial disorder","termid":"MONDO:0000473"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"vascular insufficiency disorder","termid":"MONDO:0020674"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"basilar artery insufficiency","secondary_identifiers":["SCTID:64009001","ICD9:435.0","MESH:D014715","MEDGEN:14039","UMLS:C0004812","DOID:223"],"synonyms":[{"name":"basilar artery syndrome","type":"exact"}],"termid":"MONDO:0002250","xrefs":{"Monarch":{"xref_id":"0002250"}}}


id: PBO:0086480
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative mitochondrial ribosomal protein of the small subunit; has similarity to E. coli S13 ribosomal protein; participates in controlling sporulation efficiency; localizes to vacuole in response to H2O2","termid":"PBO:0086480"}


id: PBO:0050716
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family D (Hsp60) member 1 pseudogene 2","termid":"PBO:0050716"}


id: GO:0050178
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: keto-phenylpyruvate = enol-phenylpyruvate.","definition_xrefs":["RHEA:17097"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity, interconverting keto- and enol-groups","termid":"GO:0016862"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016853","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"phenylpyruvate tautomerase activity","secondary_identifiers":["EC:5.3.2.1","MetaCyc:PHENYLPYRUVATE-TAUTOMERASE-RXN"],"synonyms":[{"name":"phenylpyruvate keto--enol tautomerase activity","type":"exact"},{"name":"phenylpyruvate keto-enol-isomerase activity","type":"exact"},{"name":"phenylpyruvic keto--enol isomerase activity","type":"exact"}],"termid":"GO:0050178"}


id: PBO:0074647
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 37","termid":"PBO:0074647"}


id: PATO:0001477
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A positional quality inhering in a bearer by virtue of the bearer's being drawn in or pulled back from any given point.","definition_xrefs":["Dictionary.com:Dictionary.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"position","termid":"PATO:0000140"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retracted","synonyms":[{"name":"moved ","type":"broad"},{"name":"retruded","type":"related"}],"termid":"PATO:0001477"}


id: PBO:0082570
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Checkpoint protein; involved in the activation of the DNA damage and meiotic pachytene checkpoints; with Mec3p and Ddc1p, forms a clamp that is loaded onto partial duplex DNA; homolog of human and S. pombe Rad1 and U. maydis Rec1 proteins","termid":"PBO:0082570"}


id: PBO:0080802
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exportin for tRNA","termid":"PBO:0080802"}


id: PBO:0001967
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coenzyme A diphosphatase (predicted)","termid":"PBO:0001967"}


id: PBO:0086776
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; SWAT-GFP and mCherry fusion proteins localize to the cytosol","termid":"PBO:0086776"}


id: PBO:0117027
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LPIN2 antisense RNA 1","termid":"PBO:0117027"}


id: MONDO:0014469
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal recessive nonsyndromic deafness in which the cause of the disease is a mutation in the CLIC5 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hearing loss, autosomal recessive","termid":"MONDO:0019588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0019497"}],"interesting_parent_ids":["MONDO:0019497","MONDO:0006025"],"is_obsolete":false,"name":"autosomal recessive nonsyndromic hearing loss 103","secondary_identifiers":["OMIM:616042","GARD:22653","MEDGEN:863487","DOID:0110464","UMLS:C4015050"],"synonyms":[{"name":"CLIC5 autosomal recessive nonsyndromic deafness","type":"narrow"},{"name":"DFNB103","type":"narrow"},{"name":"autosomal recessive deafness 103","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness 103","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness caused by mutation in CLIC5","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness type 103","type":"narrow"},{"name":"deafness, autosomal recessive 103","type":"narrow"},{"name":"deafness, autosomal recessive type 103","type":"narrow"}],"termid":"MONDO:0014469","xrefs":{"Monarch":{"xref_id":"0014469"}}}


id: GO:1901790
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving 3-(2,3-dihydroxyphenyl)propanoate.","definition_xrefs":["GOC:TermGenie","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catechol-containing compound metabolic process","termid":"GO:0009712"},{"relation_name":"is_a","term_name":"monocarboxylic acid metabolic process","termid":"GO:0032787"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"3-(2,3-dihydroxyphenyl)propanoate metabolic process","synonyms":[{"name":"3-(2,3-dihydroxyphenyl)propanoate metabolism","type":"exact"}],"termid":"GO:1901790"}


id: PBO:0110063
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding TFAR19-related protein, human Programmed cell death protein 5 ortholog, implicated in DNA repair","termid":"PBO:0110063"}


id: PBO:0052762
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 18 pseudogene 54","termid":"PBO:0052762"}


id: MONDO:0004574
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Deficiency of vitamin B6. It is usually caused by alcoholism, malabsorption, or as a side effect of medications. Signs and symptoms include stomatitis, glossitis, dermatitis, peripheral neuropathy, irritability, seizures, and anemia.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vitamin B deficiency","termid":"MONDO:0042976"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyridoxine deficiency anemia","secondary_identifiers":["SCTID:86448001","MEDGEN:543733","MESH:D026681","NCIT:C85221","ICD9:281.8","DOID:8455","ICD9:266.1","UMLS:C0272013"],"synonyms":[{"name":"B6 deficiencies, vitamin","type":"related"},{"name":"B6 deficiency, vitamin","type":"related"},{"name":"B6 vitamin deficiencies","type":"related"},{"name":"B6 vitamin deficiency","type":"related"},{"name":"deficiencies, B6 vitamin","type":"related"},{"name":"deficiencies, vitamin B6","type":"related"},{"name":"deficiency, B6 vitamin","type":"related"},{"name":"deficiency, pyridoxine","type":"related"},{"name":"deficiency, vitamin B 6","type":"related"},{"name":"deficiency, vitamin B6","type":"related"},{"name":"pyridoxine Deficincy","type":"exact"},{"name":"pyridoxine deficiency","type":"related"},{"name":"vitamin B6 deficiencies","type":"related"},{"name":"vitamin B6 deficiency","type":"related"},{"name":"vitamin B6 deficiency syndrome","type":"exact"},{"name":"vitamin deficiencies, B6","type":"related"},{"name":"vitamin deficiency, B6","type":"related"}],"termid":"MONDO:0004574","xrefs":{"Monarch":{"xref_id":"0004574"}}}


id: MONDO:0010129
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"This syndrome is characterized by intrauterine growth retardation, renal dysgenesis and a unilobed or absent thymus.","definition_xrefs":["Orphanet:3326"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thymic-renal-anal-lung dysplasia","secondary_identifiers":["MEDGEN:336425","UMLS:C1848812","GARD:5202","MESH:C536907","OMIM:274265","SCTID:723555007"],"synonyms":[{"name":"syndrome of unilobed or absent thymus, renal and ureter agenesis/dysgenesis, and intrauterine growth retardation (IUGR)","type":"related"},{"name":"thymic-renal-anal-lung dysplasia","type":"exact"}],"termid":"MONDO:0010129","xrefs":{"Monarch":{"xref_id":"0010129"}}}


id: MONDO:0005987
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infections with nematodes of the genus toxascaris.","definition_xrefs":["MESH:D017227"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Ascaridida infectious disease","termid":"MONDO:0005656"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"toxascariasis","secondary_identifiers":["UMLS:C0040522","MEDGEN:21221","DOID:3107"],"synonyms":[{"name":"Toxascaris caused disease or disorder","type":"exact"},{"name":"Toxascaris disease or disorder","type":"exact"},{"name":"Toxascaris infectious disease","type":"exact"}],"termid":"MONDO:0005987","xrefs":{"Monarch":{"xref_id":"0005987"}}}


id: PBO:0045963
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"egl-9 family hypoxia inducible factor 2","termid":"PBO:0045963"}


id: MONDO:0020568
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"myiasis","termid":"MONDO:0019147"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"cutaneous myiasis","secondary_identifiers":["icd11.foundation:1342682193","GARD:19723","UMLS:C0027031","SCTID:240877000","ICD10CM:B87.0","MEDGEN:507962","Orphanet:99983"],"termid":"MONDO:0020568","xrefs":{"Monarch":{"xref_id":"0020568"}}}


id: PBO:0110405
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PYGO2 and SHC1 antisense RNA 1","termid":"PBO:0110405"}


id: MONDO:0016981
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"disorder of thiamine metabolism and transport","termid":"MONDO:0017578"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"infantile spams-psychomotor retardation-progressive brain atrophy-basal ganglia disease syndrome","secondary_identifiers":["UMLS:C5190692","MEDGEN:1675231","Orphanet:263410","GARD:20899"],"synonyms":[{"name":"infantile spasms-psychomotor retardation-progressive brain atrophy-basal ganglia disease syndrome","type":"related"}],"termid":"MONDO:0016981","xrefs":{"Monarch":{"xref_id":"0016981"}}}


id: PBO:0055221
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2647","termid":"PBO:0055221"}


id: FYPO:0006130
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to one or more microtubules does not occur during one or both meiotic nuclear divisions.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to microtubule cytoskeleton","termid":"FYPO:0004091"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abolished protein localization to microtubule during meiosis","synonyms":[{"name":"abolished protein localisation to microtubule during meiosis","type":"exact"},{"name":"abolished protein localization to microtubule during meiotic nuclear division","type":"exact"},{"name":"protein absent from microtubule during meiosis","type":"related"},{"name":"protein localization to microtubule abolished during meiosis","type":"exact"}],"termid":"FYPO:0006130"}


id: MONDO:0100361
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any herpes simplex type 1 infectious disease that involves the lip. This virus usually responsible for cold sores (herpes labialis).","definition_xrefs":["MONDO:patterns/location","PMID:31733122"],"direct_ancestors":[{"relation_name":"is_a","term_name":"herpes labialis","termid":"MONDO:0043653"},{"relation_name":"is_a","term_name":"herpes simplex type 1 infectious disease","termid":"MONDO:0100359"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lip herpes simplex type 1 infectious disorder","termid":"MONDO:0100361","xrefs":{"Monarch":{"xref_id":"0100361"}}}


id: MOD:00801
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue, an L-histidine residue, homocitric acid and an eight-iron nine-sulfur cluster to L-cysteinyl-L-histidino-homocitryl octairon nonasulfide.","definition_xrefs":["PubMed:8392330","RESID:AA0394"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iron-sulfur cluster containing modification","termid":"MOD:00739"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-cysteine residue","termid":"MOD:02067"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-histidine residue","termid":"MOD:02070"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"L-cysteinyl-L-histidino-homocitryl octairon nonasulfide","synonyms":[{"name":"CysHis-[8Fe9S]","type":"exact"},{"name":"L-cysteinyl-L-histidino-homocitryl octairon nonasulfide carbide","type":"exact"},{"name":"nitrogenase iron-iron cofactor","type":"exact"}],"termid":"MOD:00801"}


id: PR:P40235
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A casein kinase I isoform epsilon that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03027","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"casein kinase I homolog hhp1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3H7.15","secondary_identifiers":["UniProtKB:P40235"],"synonyms":[{"name":"Spom972h-CSNK1E","type":"exact"}],"termid":"PR:P40235"}


id: PBO:0112868
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytosine deaminase Fcy1","termid":"PBO:0112868"}


id: PBO:0039268
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ALDOA pseudogene 1","termid":"PBO:0039268"}


id: GO:1903931
data:
  {"annotated_genes":["SJAG_04712"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88814],"is_not":false,"summary":null,"term":"GO:1903931"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of pyrimidine-containing compound salvage.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:23695302"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of biosynthetic process","termid":"GO:0009891"},{"relation_name":"is_a","term_name":"regulation of pyrimidine-containing compound salvage","termid":"GO:1903930"},{"relation_name":"positively_regulates","term_name":"pyrimidine-containing compound salvage","termid":"GO:0008655"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04712":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of pyrimidine-containing compound salvage","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of pyrimidine salvage","type":"related"},{"name":"activation of pyrimidine-containing compound salvage","type":"narrow"},{"name":"positive regulation of pyrimidine salvage","type":"related"},{"name":"up regulation of pyrimidine salvage","type":"related"},{"name":"up regulation of pyrimidine-containing compound salvage","type":"exact"},{"name":"up-regulation of pyrimidine salvage","type":"related"},{"name":"up-regulation of pyrimidine-containing compound salvage","type":"exact"},{"name":"upregulation of pyrimidine salvage","type":"related"},{"name":"upregulation of pyrimidine-containing compound salvage","type":"exact"}],"termid":"GO:1903931","terms_by_termid":{"GO:1903931":null}}


id: PBO:0050594
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 2","termid":"PBO:0050594"}


id: MONDO:0031332
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A bleeding syndrome characterized by spontaneous mucocutaneous bleeding and an exaggerated response to trauma due to a constitutional thrombocytopenia","definition_xrefs":["Orphanet:849"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Glanzmann thrombasthenia","termid":"MONDO:0100326"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"Glanzmann thrombasthenia 1","secondary_identifiers":["OMIM:273800","DOID:2219","GARD:15240","NCIT:C61249","SCTID:32942005","MESH:D013915"],"synonyms":[{"name":"BDPLT2","type":"exact"},{"name":"Diacyclothrombopathia 2B 3A","type":"related"},{"name":"GP IIb-IIIa Complex, deficiency of","type":"related"},{"name":"GT","type":"related"},{"name":"Glanzmann thrombasthenia","type":"broad"},{"name":"Glanzmann thrombasthenia 1","type":"exact"},{"name":"Glanzmann thrombasthenia type A","type":"related"},{"name":"Glanzmann's thrombasthenia","type":"broad"},{"name":"Platelet fibrinogen receptor, deficiency of","type":"related"},{"name":"Platelet glycoprotein 2B 3A deficiency","type":"related"},{"name":"Platelet glycoprotein IIb-IIIa deficiency","type":"related"},{"name":"Thrombocytasthenia","type":"exact"},{"name":"bleeding disorder, Platelet-type, 2","type":"related"},{"name":"deficiency of GP 2B 3A complex","type":"related"},{"name":"deficiency of GP IIb-IIIa complex","type":"exact"},{"name":"deficiency of glycoprotein complex IIb-IIIa","type":"exact"},{"name":"deficiency of platelet fibrinogen receptor","type":"exact"},{"name":"glycoprotein Complex IIb-IIIa, deficiency of","type":"related"},{"name":"glycoprotein IIb/IIIa defect","type":"exact"},{"name":"platelet glycoprotein IIb-IIIa deficiency","type":"exact"},{"name":"platelet-type bleeding disorder 2","type":"exact"},{"name":"thrombasthenia","type":"exact"},{"name":"thrombasthenia of Glanzmann and Naegeli","type":"exact"}],"termid":"MONDO:0031332","xrefs":{"Monarch":{"xref_id":"0031332"}}}


id: PBO:0029490
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_microcolony,_elongated_cells_(obsolete_FYPO:0002225)","termid":"PBO:0029490"}


id: PBO:0091743
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cyclin-Dependent Kinase","termid":"PBO:0091743"}


id: GO:0034012
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: FAD = AMP + H+ + riboflavin cyclic-4',5'-phosphate.","definition_xrefs":["RHEA:13729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclase activity","termid":"GO:0009975"},{"relation_name":"is_a","term_name":"phosphorus-oxygen lyase activity","termid":"GO:0016849"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0009975"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0009975","GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"FAD-AMP lyase (cyclizing) activity","secondary_identifiers":["EC:4.6.1.15"],"synonyms":[{"name":"FAD AMP-lyase (cyclic-FMN-forming) activity","type":"related"},{"name":"FAD AMP-lyase (riboflavin-cyclic-4',5'-phosphate-forming) activity","type":"related"},{"name":"FMN cyclase activity","type":"related"}],"termid":"GO:0034012"}


id: MONDO:0005464
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Retinal detachment secondary to retinal tear or break.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinal detachment","termid":"MONDO:0008375"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"rhegmatogenous retinal detachment","secondary_identifiers":["EFO:0005240","NCIT:C118755","SCTID:19620000","MEDGEN:489829","UMLS:C0271055"],"termid":"MONDO:0005464","xrefs":{"Monarch":{"xref_id":"0005464"}}}


id: MONDO:0001807
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A type of familial lipid metabolism disorder characterized by a variable pattern of elevated plasma cholesterol and/or triglycerides. Multiple genes on different chromosomes may be involved, such as the major late transcription factor (upstream stimulatory factors) on chromosome 1.","definition_xrefs":["MESH:D006950"],"gene_count":0,"genotype_count":0,"name":"obsolete familial combined hyperlipidemia (obsolete MONDO:0001807)","secondary_identifiers":["Orphanet:79211","SCTID:238040008","ICD9:272.4","MedDRA:10027763","DOID:13809"],"synonyms":[{"name":"combined hyperlipidemia","type":"related"},{"name":"combined hyperlipoproteinemia","type":"exact"},{"name":"familial combined hyperlipidemia (disorder) [ambiguous]","type":"exact"},{"name":"familial multiple lipoprotein-type hyperlipidemia","type":"exact"},{"name":"hyperbetalipoproteinemia with prebetalipoproteinemia","type":"exact"},{"name":"mixed hyperlipidaemia","type":"exact"},{"name":"mixed hyperlipidemia","type":"exact"},{"name":"mixed hyperlipoproteinemia","type":"exact"},{"name":"type IIb hyperlipoproteinemia","type":"narrow"}],"termid":"MONDO:0001807","xrefs":{"Monarch":{"xref_id":"0001807"}}}


id: GO:0032243
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the directed movement of a nucleoside into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of nucleobase-containing compound transport","termid":"GO:0032240"},{"relation_name":"is_a","term_name":"regulation of nucleoside transport","termid":"GO:0032242"},{"relation_name":"negatively_regulates","term_name":"nucleoside transport","termid":"GO:0015858"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of nucleoside transport","synonyms":[{"name":"down regulation of nucleoside transport","type":"exact"},{"name":"down-regulation of nucleoside transport","type":"exact"},{"name":"downregulation of nucleoside transport","type":"exact"},{"name":"inhibition of nucleoside transport","type":"narrow"}],"termid":"GO:0032243"}


id: PBO:0087802
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Tail-anchored plasma membrane protein with a conserved CYSTM module; possibly involved in response to stress; may contribute to non-homologous end-joining (NHEJ) based on ydl012c htz1 double null phenotype; YDL012C has a paralog, YBR016W, that arose from the whole genome duplication","termid":"PBO:0087802"}


id: GO:0097257
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: leukotriene B4 + NADP+ = 12-oxo-leukotriene B4 + NADPH + H+.","definition_xrefs":["PMID:8394361","PMID:9461497","KEGG_REACTION:R03864","GOC:mw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH-OH group of donors","termid":"GO:0016614"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"leukotriene B4 12-hydroxy dehydrogenase activity","secondary_identifiers":["RHEA:50608","Reactome:R-HSA-2161567"],"synonyms":[{"name":"leukotriene B4 12-hydroxydehydrogenase activity","type":"exact"}],"termid":"GO:0097257"}


id: GO:0097503
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The covalent attachment of sialic acid to a substrate molecule.","definition_xrefs":["GOC:cjm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"macromolecule modification","termid":"GO:0043412"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sialylation","termid":"GO:0097503"}


id: GO:0032157
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A contractile ring, i.e. a cytoskeletal structure composed of actin filaments and myosin, that forms beneath the plasma membrane of the prospore envelope in meiotic cells in preparation for completing cytokinesis.","definition_xrefs":["GOC:krc","PMID:16009555"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic actomyosin contractile ring","termid":"GO:0110086"},{"relation_name":"part_of","term_name":"ascospore-type prospore","termid":"GO:0042764"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0070938"},{"rel_name":"part_of","termid":"GO:0015629"},{"rel_name":"part_of","termid":"GO:0005938"}],"interesting_parent_ids":["GO:0070938","GO:0005737","GO:0005575","GO:0015629","GO:0005938"],"is_obsolete":false,"name":"prospore contractile ring","synonyms":[{"name":"actomyosin ring","type":"related"},{"name":"cytokinetic ring","type":"related"},{"name":"meiotic contractile ring","type":"related"}],"termid":"GO:0032157"}


id: FYECO:0000231
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which sodium sulfite (Na2SO3) was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ Na2SO3","synonyms":[{"name":"sodium sulfite added","type":"exact"}],"termid":"FYECO:0000231"}


id: MONDO:0006421
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A usually polypoid neoplasm that arises from the glandular epithelium of the small intestine. It is characterized by a tubular architectural pattern. The neoplastic glandular cells have dysplastic features.","definition_xrefs":["NCIT:C43552"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenoma of small intestine","termid":"MONDO:0021303"},{"relation_name":"is_a","term_name":"tubular adenoma","termid":"MONDO:0024660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"small intestinal tubular adenoma","secondary_identifiers":["EFO:1000538","MEDGEN:328036","UMLS:C1710112"],"termid":"MONDO:0006421","xrefs":{"Monarch":{"xref_id":"0006421"}}}


id: PBO:0049069
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 85","termid":"PBO:0049069"}


id: MONDO:0011133
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Yemenite deaf-blind hypopigmentation syndrome is an exceedingly rare genetic disorder characterized by cutaneous pigmentation anomalies, ocular disorders and hearing loss.","definition_xrefs":["Orphanet:3214"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypopigmentation of the skin","termid":"MONDO:0019290"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"deaf blind hypopigmentation syndrome, Yemenite type","secondary_identifiers":["MEDGEN:355712","OMIM:601706","SCTID:721084001","UMLS:C1866425","icd11.foundation:2090985024","GARD:5535","MESH:C536771"],"synonyms":[{"name":"Warburg Thomsen syndrome","type":"related"},{"name":"Warburg-Thomsen syndrome","type":"exact"},{"name":"Yemenite (Warburg) deaf-blind hypopigmentation syndrome","type":"related"},{"name":"Yemenite deaf-blind hypopigmentation syndrome","type":"exact"}],"termid":"MONDO:0011133","xrefs":{"Monarch":{"xref_id":"0011133"}}}


id: PBO:0091631
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-lactate dehydrogenase","termid":"PBO:0091631"}


id: GO:1902204
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of hepatocyte growth factor receptor signaling pathway.","definition_xrefs":["GOC:TermGenie","PMID:18819921"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of signal transduction","termid":"GO:0009967"},{"relation_name":"is_a","term_name":"regulation of hepatocyte growth factor receptor signaling pathway","termid":"GO:1902202"},{"relation_name":"positively_regulates","term_name":"hepatocyte growth factor receptor signaling pathway","termid":"GO:0048012"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of hepatocyte growth factor receptor signaling pathway","synonyms":[{"name":"activation of HGF receptor signaling pathway","type":"exact"},{"name":"activation of HGF receptor signalling pathway","type":"exact"},{"name":"activation of Met signaling pathway","type":"narrow"},{"name":"activation of hepatocyte growth factor receptor signaling pathway","type":"narrow"},{"name":"positive regulation of HGF receptor signaling pathway","type":"exact"},{"name":"positive regulation of HGF receptor signalling pathway","type":"exact"},{"name":"positive regulation of Met signaling pathway","type":"narrow"},{"name":"up regulation of HGF receptor signaling pathway","type":"exact"},{"name":"up regulation of HGF receptor signalling pathway","type":"exact"},{"name":"up regulation of Met signaling pathway","type":"narrow"},{"name":"up regulation of hepatocyte growth factor receptor signaling pathway","type":"exact"},{"name":"up-regulation of HGF receptor signaling pathway","type":"exact"},{"name":"up-regulation of HGF receptor signalling pathway","type":"exact"},{"name":"up-regulation of Met signaling pathway","type":"narrow"},{"name":"up-regulation of hepatocyte growth factor receptor signaling pathway","type":"exact"},{"name":"upregulation of HGF receptor signaling pathway","type":"exact"},{"name":"upregulation of HGF receptor signalling pathway","type":"exact"},{"name":"upregulation of Met signaling pathway","type":"narrow"},{"name":"upregulation of hepatocyte growth factor receptor signaling pathway","type":"exact"}],"termid":"GO:1902204"}


id: MONDO:0011663
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Juvenile primary lateral sclerosis (JPLS) is a very rare motor neuron disease characterized by progressive upper motor neuron dysfunction leading to loss of the ability to walk with wheelchair dependence, and subsequently, loss of motor speech production.","definition_xrefs":["Orphanet:247604"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lateral sclerosis","termid":"MONDO:0018155"},{"relation_name":"is_a","term_name":"ALS2-related motor neuron disease","termid":"MONDO:0100227"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"juvenile primary lateral sclerosis","secondary_identifiers":["GARD:4485","MESH:C536416","SCTID:717964007","OMIM:606353","UMLS:C1853396","MEDGEN:342870"],"synonyms":[{"name":"JPLS","type":"exact"},{"name":"PLS juvenile","type":"related"},{"name":"PLSJ","type":"related"},{"name":"Pls, juvenile","type":"related"},{"name":"juvenile PLS","type":"exact"},{"name":"primary lateral sclerosis, juvenile","type":"related"}],"termid":"MONDO:0011663","xrefs":{"Monarch":{"xref_id":"0011663"}}}


id: PBO:0046257
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongator acetyltransferase complex subunit 6","termid":"PBO:0046257"}


id: GO:0016584
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Ordering of successions of nucleosomes into regular arrays so that nucleosomes are positioned at defined distances from one another.","definition_xrefs":["PMID:8676389","GOC:bf","PMID:11447119"],"gene_count":0,"genotype_count":0,"name":"obsolete nucleosome positioning (obsolete GO:0016584)","synonyms":[{"name":"nucleosome spacing","type":"exact"}],"termid":"GO:0016584"}


id: PBO:0084919
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Molecular chaperone of the endoplasmic reticulum lumen; involved in polypeptide translocation and folding; nucleotide exchange factor for the ER lumenal Hsp70 chaperone Kar2p; regulated by the unfolded protein response pathway","termid":"PBO:0084919"}


id: PBO:0002308
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HECT-type ubiquitin-protein ligase E3 Pub1","termid":"PBO:0002308"}


id: GO:0099096
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The giant, cup-shaped axon terminal of a vestibular afferent neuron, serving as a post-synaptic contact to a type I hair cell.","definition_xrefs":["PMID:10706428","PMID:25355208"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axon terminus","termid":"GO:0043679"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"vestibular calyx terminal","termid":"GO:0099096"}


id: MONDO:0024522
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any primary cutaneous amyloidosis in which the cause of the disease is a mutation in the OSMR gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial primary localized cutaneous amyloidosis","termid":"MONDO:0007101"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0021179"},{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0021179","MONDO:0005093","MONDO:0005066"],"is_obsolete":false,"name":"amyloidosis, primary localized cutaneous, 1","secondary_identifiers":["OMIM:105250","DOID:0080930","GARD:18637","MEDGEN:1639046","UMLS:C4551501"],"synonyms":[{"name":"OSMR primary cutaneous amyloidosis","type":"exact"},{"name":"PCA","type":"related"},{"name":"PLCA1","type":"exact"},{"name":"amyloidosis 9","type":"exact"},{"name":"amyloidosis, familial cutaneous lichen","type":"related"},{"name":"amyloidosis, primary cutaneous, 1","type":"exact"},{"name":"amyloidosis, primary localised cutaneous, type 1","type":"exact"},{"name":"amyloidosis, primary localized cutaneous, 1","type":"exact"},{"name":"amyloidosis, primary localized cutaneous, type 1","type":"exact"},{"name":"lichen amyloidosis, familial","type":"related"},{"name":"primary cutaneous amyloidosis caused by mutation in OSMR","type":"exact"}],"termid":"MONDO:0024522","xrefs":{"Monarch":{"xref_id":"0024522"}}}


id: PATO:0000633
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A spatial pattern inhering in a bearer by virtue of the bearer's being not overfilled.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spatial pattern","termid":"PATO:0000060"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncrowded","termid":"PATO:0000633"}


id: GO:0090275
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency, extent of the regulated release of somatostatin from secretory granules in the D cells of the pancreas.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of somatostatin secretion","termid":"GO:0090273"},{"relation_name":"is_a","term_name":"negative regulation of peptide hormone secretion","termid":"GO:0090278"},{"relation_name":"negatively_regulates","term_name":"somatostatin secretion","termid":"GO:0070253"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0023052","GO:0006810"],"is_obsolete":false,"name":"negative regulation of somatostatin secretion","termid":"GO:0090275"}


id: GO:0070431
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by the binding of a ligand (such as a bacterial peptidoglycan) to a cytoplasmic nucleotide-binding oligomerization domain containing 2 (NOD2) protein receptor, and ending with regulation of a downstream cellular process.","definition_xrefs":["PMID:17944960","PMID:18585455","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide-binding domain, leucine rich repeat containing receptor signaling pathway","termid":"GO:0035872"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"nucleotide-binding oligomerization domain containing 2 signaling pathway","synonyms":[{"name":"NOD2 signaling pathway","type":"exact"},{"name":"nucleotide-binding oligomerization domain containing 2 signalling pathway","type":"exact"}],"termid":"GO:0070431"}


id: GO:2000835
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of androgen secretion.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of steroid hormone secretion","termid":"GO:2000832"},{"relation_name":"is_a","term_name":"regulation of androgen secretion","termid":"GO:2000834"},{"relation_name":"negatively_regulates","term_name":"androgen secretion","termid":"GO:0035935"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of androgen secretion","termid":"GO:2000835"}


id: PBO:0030148
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_gamma-glutamyltransferase_activity","termid":"PBO:0030148"}


id: MOD:00393
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydroxyl group hydrogen with a methyl group to produce either an ether from an alcohol or an ester from an acid.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methylated residue","termid":"MOD:00427"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"O-methylated residue","synonyms":[{"name":"OMeRes","type":"exact"}],"termid":"MOD:00393"}


id: GO:0019487
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving acetylene, a colorless, volatile, explosive gas, that occur in the absence of oxygen.","definition_xrefs":["ISBN:0721662544"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetylene metabolic process","termid":"GO:0018864"},{"relation_name":"is_a","term_name":"xenobiotic catabolic process","termid":"GO:0042178"},{"relation_name":"is_a","term_name":"alkyne catabolic process","termid":"GO:0043454"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anaerobic acetylene catabolic process","secondary_identifiers":["MetaCyc:P161-PWY"],"synonyms":[{"name":"anaerobic acetylene breakdown","type":"exact"},{"name":"anaerobic acetylene catabolism","type":"exact"},{"name":"anaerobic acetylene degradation","type":"exact"},{"name":"anaerobic ethyne catabolic process","type":"exact"},{"name":"anaerobic ethyne catabolism","type":"exact"}],"termid":"GO:0019487"}


id: MONDO:0045010
data:
  {"annotated_genes":["SJAG_00747","SJAG_04952","SJAG_01950","SJAG_04363","SJAG_03774","SJAG_00334","SJAG_04697","SJAG_01209","SJAG_03056","SJAG_04053","SJAG_04316","SJAG_03656","SJAG_02102","SJAG_01069","SJAG_00437","SJAG_02648","SJAG_04127","SJAG_04096","SJAG_03188","SJAG_03227","SJAG_01491","SJAG_00924","SJAG_02783","SJAG_03311"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86000],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012052"},{"annotations":[87419],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013349"},{"annotations":[86115],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011783"},{"annotations":[87235],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011933"},{"annotations":[86870],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010998"},{"annotations":[85605],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011291"},{"annotations":[85444],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011969"},{"annotations":[86806],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012117"},{"annotations":[86186],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014248"},{"annotations":[85567],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012248"},{"annotations":[87032,87033],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013162"},{"annotations":[86314],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014142"},{"annotations":[85394],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0800044"},{"annotations":[85780],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014543"},{"annotations":[86793],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013789"},{"annotations":[87248],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010472"},{"annotations":[85413],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011964"},{"annotations":[87615],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009890"},{"annotations":[86952],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011629"},{"annotations":[86695],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011257"},{"annotations":[86219,86220,86221],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009364"},{"annotations":[86307],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014140"},{"annotations":[87026,87027],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013154"},{"annotations":[87031],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013159"},{"annotations":[86312],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014141"},{"annotations":[87029,87030],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013160"},{"annotations":[87559],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013968"},{"annotations":[85391],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008907"},{"annotations":[86676],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012783"},{"annotations":[86025],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014270"},{"annotations":[86028],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014271"},{"annotations":[86521],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013870"}]},"cv_name":"mondo","definition":"A disease that has its basis in the disruption of glycoprotein metabolic process.","definition_xrefs":["MONDO:design_pattern"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inborn errors of metabolism","termid":"MONDO:0019052"}],"gene_count":24,"genes_by_uniquename":{"SJAG_00334":null,"SJAG_00437":null,"SJAG_00747":null,"SJAG_00924":null,"SJAG_01069":null,"SJAG_01209":null,"SJAG_01491":null,"SJAG_01950":null,"SJAG_02102":null,"SJAG_02648":null,"SJAG_02783":null,"SJAG_03056":null,"SJAG_03188":null,"SJAG_03227":null,"SJAG_03311":null,"SJAG_03656":null,"SJAG_03774":null,"SJAG_04053":null,"SJAG_04096":null,"SJAG_04127":null,"SJAG_04316":null,"SJAG_04363":null,"SJAG_04697":null,"SJAG_04952":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"glycoprotein metabolism disease","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:575248","SCTID:238045003","UMLS:C0342844"],"synonyms":[{"name":"disorder of glycoprotein metabolic process","type":"exact"},{"name":"disorder of glycoprotein metabolism","type":"exact"},{"name":"glycoprotein metabolic process disease","type":"exact"},{"name":"glycoprotein metabolism disease","type":"exact"}],"termid":"MONDO:0045010","terms_by_termid":{"MONDO:0008907":null,"MONDO:0009364":null,"MONDO:0009890":null,"MONDO:0010472":null,"MONDO:0010998":null,"MONDO:0011257":null,"MONDO:0011291":null,"MONDO:0011629":null,"MONDO:0011783":null,"MONDO:0011933":null,"MONDO:0011964":null,"MONDO:0011969":null,"MONDO:0012052":null,"MONDO:0012117":null,"MONDO:0012248":null,"MONDO:0012783":null,"MONDO:0013154":null,"MONDO:0013159":null,"MONDO:0013160":null,"MONDO:0013162":null,"MONDO:0013349":null,"MONDO:0013789":null,"MONDO:0013870":null,"MONDO:0013968":null,"MONDO:0014140":null,"MONDO:0014141":null,"MONDO:0014142":null,"MONDO:0014248":null,"MONDO:0014270":null,"MONDO:0014271":null,"MONDO:0014543":null,"MONDO:0800044":null},"xrefs":{"Monarch":{"xref_id":"0045010"}}}


id: PBO:0064751
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 87","termid":"PBO:0064751"}


id: GO:1990060
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Protein complex facilitating ATP-dependent maltose transport through inner cell membrane (periplasm to cytoplasm) in Gram-negative bacteria. In E. coli the system is composed of a periplasmic maltose-binding protein (MBP), two integral membrane proteins, MalF and MalG, and two copies of the cytoplasmic ATP-binding cassette MalK.","definition_xrefs":["PMID:18033289"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ATP-binding cassette (ABC) transporter complex","termid":"GO:0043190"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005886"],"is_obsolete":false,"name":"maltose transport complex","synonyms":[{"name":"maltose ABC transporter complex","type":"exact"},{"name":"maltose ATP-binding cassette transporter complex","type":"exact"}],"termid":"GO:1990060"}


id: GO:0030276
data:
  {"annotated_genes":["SJAG_04644","SJAG_02282","SJAG_05296","SJAG_00152","SJAG_04565","SJAG_02177","SJAG_00104","SJAG_01748"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[60661,68682,74095,80100,80128],"is_not":false,"summary":null,"term":"GO:0030276"},{"annotations":[74055],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032050"},{"annotations":[78111,77237],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032051"}]},"cv_name":"molecular_function","definition":"Binding to a clathrin heavy or light chain, the main components of the coat of coated vesicles and coated pits, and which also occurs in synaptic vesicles.","definition_xrefs":["GOC:jl","ISBN:0198506732","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00104":null,"SJAG_00152":null,"SJAG_01748":null,"SJAG_02177":null,"SJAG_02282":null,"SJAG_04565":null,"SJAG_04644":null,"SJAG_05296":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"clathrin binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null},"termid":"GO:0030276","terms_by_termid":{"GO:0030276":null,"GO:0032050":null,"GO:0032051":null}}


id: PBO:0080830
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"YAP1 pseudogene 1","termid":"PBO:0080830"}


id: GO:0060734
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of eIF2 alpha phosphorylation as a cellular response to endoplasmic reticulum stress.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein phosphorylation","termid":"GO:0001932"},{"relation_name":"is_a","term_name":"regulation of translational initiation","termid":"GO:0006446"},{"relation_name":"is_a","term_name":"regulation of response to endoplasmic reticulum stress","termid":"GO:1905897"},{"relation_name":"regulates","term_name":"eiF2alpha phosphorylation in response to endoplasmic reticulum stress","termid":"GO:0036492"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of endoplasmic reticulum stress-induced eIF2 alpha phosphorylation","synonyms":[{"name":"regulation of ER stress-induced eIF2 alpha phosphorylation","type":"exact"},{"name":"regulation of eIF2 alpha phosphorylation by ER stress","type":"exact"},{"name":"regulation of eIF2 alpha phosphorylation by endoplasmic reticulum stress","type":"exact"}],"termid":"GO:0060734"}


id: PBO:0052310
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KIAA0513","termid":"PBO:0052310"}


id: MONDO:0021462
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign neoplasm that involves the rectum.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rectal neoplasm","termid":"MONDO:0002165"},{"relation_name":"is_a","term_name":"benign neoplasm of large intestine","termid":"MONDO:0021444"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"benign neoplasm of rectum","secondary_identifiers":["UMLS:C0496867","MEDGEN:99222","NCIT:C4774","ICD10CM:D12.8","icd11.foundation:1805730142","SCTID:92318000"],"synonyms":[{"name":"benign neoplasm of the rectum","type":"exact"},{"name":"benign rectal neoplasm","type":"exact"},{"name":"benign rectal neoplasms","type":"exact"},{"name":"benign rectal tumor","type":"exact"},{"name":"benign rectal tumors","type":"exact"},{"name":"benign rectal tumour","type":"exact"},{"name":"benign rectal tumours","type":"exact"},{"name":"benign tumor of rectum","type":"exact"},{"name":"benign tumor of the rectum","type":"exact"},{"name":"benign tumour of rectum","type":"exact"},{"name":"benign tumour of the rectum","type":"exact"},{"name":"rectal neoplasms, benign","type":"exact"},{"name":"rectal tumors, benign","type":"exact"},{"name":"rectum benign neoplasm","type":"exact"}],"termid":"MONDO:0021462","xrefs":{"Monarch":{"xref_id":"0021462"}}}


id: GO:0000776
data:
  {"annotated_genes":["SJAG_02761","SJAG_05220","SJAG_00207","SJAG_05321","SJAG_01278","SJAG_01546","SJAG_03867","SJAG_03619","SJAG_04581","SJAG_02336","SJAG_00646","SJAG_01805","SJAG_02814","SJAG_03327","SJAG_02664","SJAG_04040","SJAG_05266","SJAG_02731","SJAG_00684","SJAG_00350","SJAG_03048","SJAG_03832","SJAG_04841","SJAG_02451","SJAG_00666","SJAG_01297","SJAG_04076","SJAG_03681","SJAG_01928","SJAG_04259","SJAG_01371","SJAG_00697","SJAG_03989","SJAG_01228","SJAG_04884","SJAG_00794","SJAG_01613","SJAG_03220","SJAG_01837","SJAG_04177","SJAG_04412","SJAG_03217","SJAG_03161","SJAG_03437","SJAG_02513","SJAG_00418","SJAG_00082","SJAG_05273","SJAG_01211","SJAG_04623","SJAG_02346","SJAG_04255","SJAG_04696","SJAG_03683","SJAG_00594","SJAG_01775","SJAG_03540","SJAG_02624","SJAG_04699","SJAG_01082","SJAG_00918","SJAG_04126","SJAG_04745","SJAG_01224","SJAG_02807","SJAG_05319","SJAG_01330","SJAG_02651"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[70879,73214,73684,75766,76446,79797,79834,80245,89717,90345,91139,95128,97117,97626,99567,100497,102706,104246,104904,105230,105842,108621,109588,112273,112429,113764,115461,119235,119635,119972],"is_not":false,"summary":null,"term":"GO:0000776"},{"annotations":[100881,75322,63773,62678,117297,68666,60789,63840,79975,76835],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0042729"},{"annotations":[110690,114872,116276,113603,99623,117044,112564],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000939"},{"annotations":[101693,114161],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0180019"},{"annotations":[60423,70281,80186,74778],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000444"},{"annotations":[98262,113493,94663,113932,106735,61961,95058,90049,90400,114516,105914],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031511"},{"annotations":[69441,112063],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0033551"},{"annotations":[77540,76106,75369,76179],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031262"},{"annotations":[100740,114877,119041],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000940"}]},"cv_name":"cellular_component","definition":"A multisubunit complex that is located at the centromeric region of DNA and provides an attachment point for the spindle microtubules.","definition_xrefs":["GOC:elh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular membraneless organelle","termid":"GO:0043232"},{"relation_name":"is_a","term_name":"supramolecular complex","termid":"GO:0099080"},{"relation_name":"part_of","term_name":"condensed chromosome, centromeric region","termid":"GO:0000779"}],"gene_count":68,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_00207":null,"SJAG_00350":null,"SJAG_00418":null,"SJAG_00594":null,"SJAG_00646":null,"SJAG_00666":null,"SJAG_00684":null,"SJAG_00697":null,"SJAG_00794":null,"SJAG_00918":null,"SJAG_01082":null,"SJAG_01211":null,"SJAG_01224":null,"SJAG_01228":null,"SJAG_01278":null,"SJAG_01297":null,"SJAG_01330":null,"SJAG_01371":null,"SJAG_01546":null,"SJAG_01613":null,"SJAG_01775":null,"SJAG_01805":null,"SJAG_01837":null,"SJAG_01928":null,"SJAG_02336":null,"SJAG_02346":null,"SJAG_02451":null,"SJAG_02513":null,"SJAG_02624":null,"SJAG_02651":null,"SJAG_02664":null,"SJAG_02731":null,"SJAG_02761":null,"SJAG_02807":null,"SJAG_02814":null,"SJAG_03048":null,"SJAG_03161":null,"SJAG_03217":null,"SJAG_03220":null,"SJAG_03327":null,"SJAG_03437":null,"SJAG_03540":null,"SJAG_03619":null,"SJAG_03681":null,"SJAG_03683":null,"SJAG_03832":null,"SJAG_03867":null,"SJAG_03989":null,"SJAG_04040":null,"SJAG_04076":null,"SJAG_04126":null,"SJAG_04177":null,"SJAG_04255":null,"SJAG_04259":null,"SJAG_04412":null,"SJAG_04581":null,"SJAG_04623":null,"SJAG_04696":null,"SJAG_04699":null,"SJAG_04745":null,"SJAG_04841":null,"SJAG_04884":null,"SJAG_05220":null,"SJAG_05266":null,"SJAG_05273":null,"SJAG_05319":null,"SJAG_05321":null},"genotype_count":0,"in_subsets":["cc_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005694"}],"interesting_parent_ids":["GO:0005575","GO:0005694"],"is_obsolete":false,"name":"kinetochore","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21802294":null,"PMID:32109380":null},"secondary_identifiers":["GO:0031617","GO:0000778","Wikipedia:Kinetochore","GO:0000777","GO:0005699"],"synonyms":[{"name":"NMS complex","type":"narrow"},{"name":"condensed chromosome kinetochore","type":"exact"},{"name":"condensed nuclear chromosome kinetochore","type":"exact"}],"termid":"GO:0000776","terms_by_termid":{"GO:0000444":null,"GO:0000776":null,"GO:0000939":null,"GO:0000940":null,"GO:0031262":null,"GO:0031511":null,"GO:0033551":null,"GO:0042729":null,"GO:0180019":null}}


id: PR:Q9USI0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC794.15 gene.","definition_xrefs":["UniProtKB:Q9USI0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C794.15 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC794.15","synonyms":[{"name":"Spom972h-SPCC794.15","type":"exact"}],"termid":"PR:Q9USI0"}


id: GO:1903387
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of homophilic cell adhesion.","definition_xrefs":["GOC:als","GOC:TermGenie","PMID:21724833","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell-cell adhesion","termid":"GO:0022409"},{"relation_name":"is_a","term_name":"regulation of homophilic cell adhesion","termid":"GO:1903385"},{"relation_name":"positively_regulates","term_name":"homophilic cell adhesion via plasma membrane adhesion molecules","termid":"GO:0007156"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"positively_regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"positive regulation of homophilic cell adhesion","synonyms":[{"name":"activation of homophilic cell adhesion","type":"narrow"},{"name":"up regulation of homophilic cell adhesion","type":"exact"},{"name":"up-regulation of homophilic cell adhesion","type":"exact"},{"name":"upregulation of homophilic cell adhesion","type":"exact"}],"termid":"GO:1903387"}


id: PBO:0052406
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"killer cell immunoglobulin like receptor, two Ig domains pseudogene 1","termid":"PBO:0052406"}


id: PBO:0083522
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified ORF PEX14/YGL153W","termid":"PBO:0083522"}


id: MONDO:0001379
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant neoplasm involving the ureteral orifice.","direct_ancestors":[{"relation_name":"is_a","term_name":"bladder dome cancer","termid":"MONDO:0001380"},{"relation_name":"is_a","term_name":"ureter cancer","termid":"MONDO:0008627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"ureteric orifice cancer","secondary_identifiers":["UMLS:C0153614","SCTID:188245008","DOID:11818","MEDGEN:102280","ICD9:188.6"],"synonyms":[{"name":"cancer of ureteral orifice","type":"exact"},{"name":"malignant neoplasm of ureteral orifice","type":"exact"},{"name":"malignant neoplasm of ureteric orifice of urinary bladder","type":"exact"},{"name":"malignant tumor of ureteric orifice","type":"exact"},{"name":"malignant tumour of ureteric orifice","type":"exact"},{"name":"malignant ureteral orifice neoplasm","type":"exact"},{"name":"orifice of the ureter","type":"exact"},{"name":"ureteral orifice cancer","type":"exact"}],"termid":"MONDO:0001379","xrefs":{"Monarch":{"xref_id":"0001379"}}}


id: MONDO:0005807
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare immunodeficiency syndrome characterized by the decrease of the CD4-positive lymphocytes below 300 per cubic millimeter in the absence of identifiable immunodeficiency causes. Patients with this syndrome are at an increased risk of opportunistic infections.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T-cell immunodeficiency","termid":"MONDO:0003780"},{"relation_name":"is_a","term_name":"lymphopenia","termid":"MONDO:0003783"},{"relation_name":"is_a","term_name":"idiopathic disease","termid":"MONDO:0700007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"idiopathic CD4-positive T-lymphocytopenia","secondary_identifiers":["MEDGEN:64647","MESH:D018344","DOID:3109","NCIT:C84780","UMLS:C0206744"],"termid":"MONDO:0005807","xrefs":{"Monarch":{"xref_id":"0005807"}}}


id: PBO:0080881
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"YPEL5 pseudogene 1","termid":"PBO:0080881"}


id: PBO:0084084
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Guanine nucleotide exchange factor for ADP ribosylation factors (ARFs); involved in vesicular transport between the Golgi and ER, Golgi organization, and actin cytoskeleton organization; GEA1 has a paralog, GEA2, that arose from the whole genome duplication","termid":"PBO:0084084"}


id: PBO:0088436
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription factor","termid":"PBO:0088436"}


id: FYPO:0005975
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which lithium ion export from the cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal transport","termid":"FYPO:0001071"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001312","FYPO:0001320","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal lithium export","synonyms":[{"name":"normal lithium export during mitotic cell cycle","type":"related"},{"name":"normal lithium export during vegetative growth","type":"exact"},{"name":"normal lithium export from cell","type":"exact"},{"name":"normal lithium ion export from cell","type":"exact"}],"termid":"FYPO:0005975"}


id: MONDO:0020749
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"polycystic lipomembranous osteodysplasia with sclerosing leukoencephaly","termid":"MONDO:0009092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0006025"],"is_obsolete":false,"name":"polycystic lipomembranous osteodysplasia with sclerosing leukoencephalopathy 1","secondary_identifiers":["MEDGEN:1648386","OMIM:221770","UMLS:C4721893"],"synonyms":[{"name":"polycystic lipomembranous osteodysplasia with sclerosing leukoencephalopathy 1","type":"exact"}],"termid":"MONDO:0020749","xrefs":{"Monarch":{"xref_id":"0020749"}}}


id: PBO:0117207
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane sulfite efflux transmembrane transporter Ssu2","termid":"PBO:0117207"}


id: GO:0019879
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of peptidyl-thyronine from peptidyl-tyrosine in thyroglobulin by phenyl transfer coupled with the formation of peptidyl-dehydroalanine.","definition_xrefs":["GOC:jsg"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-thyronine biosynthetic process from peptidyl-tyrosine (obsolete GO:0019879)","synonyms":[{"name":"peptidyl-thyronine anabolism from peptidyl-tyrosine","type":"exact"},{"name":"peptidyl-thyronine formation from peptidyl-tyrosine","type":"exact"},{"name":"peptidyl-thyronine synthesis from peptidyl-tyrosine","type":"exact"}],"termid":"GO:0019879"}


id: PBO:0080417
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VPS51 pseudogene 1","termid":"PBO:0080417"}


id: GO:0010344
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A cellular process that results in the biosynthesis of constituent macromolecules, assembly, and arrangement of constituent parts of a seed oilbody. Seed oilbodies are simple organelles comprising a matrix of triglyceride surrounded by a phospholipid monolayer embedded and covered with unique proteins called oleosins. Seed oilbodies supply the energy requirements for the growth of the seedling after germination.","definition_xrefs":["GOC:jl","PMID:16877495"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component biogenesis","termid":"GO:0044085"},{"relation_name":"part_of","term_name":"seed development","termid":"GO:0048316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"seed oilbody biogenesis","synonyms":[{"name":"oleosome biogenesis","type":"related"},{"name":"seed oil body organization","type":"exact"},{"name":"spherosome biogenesis","type":"related"}],"termid":"GO:0010344"}


id: FYPO:0007732
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the distribution of a protein localized to chromatin at the 3' ends of genes that can be transcribed by RNA polymerase III is normal (i.e. indistinguishable from wild type) during metaphase of the mitotic cell cycle.","definition_xrefs":["PMID:33771877","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to chromatin at 3' end of genes","termid":"FYPO:0007731"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000138","FYPO:0000002","FYPO:0000257","FYPO:0001312"],"is_obsolete":false,"name":"normal protein localization to chromatin at 3' end of RNA polymerase III-transcribed genes during mitotic metaphase","synonyms":[{"name":"normal condensin localization to chromatin at 3' end of RNA polymerase III-transcribed genes during mitotic metaphase","type":"narrow"},{"name":"normal protein localisation to chromatin at 3' end of RNA polymerase III-transcribed genes during mitotic metaphase","type":"exact"},{"name":"normal protein localization to chromatin at 3' end of RNA polymerase III-transcribed genes during metaphase during vegetative growth","type":"exact"},{"name":"normal protein localization to chromatin at 3' end of RNA polymerase III-transcribed genes during metaphase of mitotic cell cycle","type":"exact"},{"name":"normal protein localization to chromatin downstream of RNA polymerase III-transcribed genes during mitotic metaphase","type":"exact"}],"termid":"FYPO:0007732"}


id: GO:0032264
data:
  {"annotated_genes":["SJAG_04123","SJAG_06634"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[65107,76018],"is_not":false,"summary":null,"term":"GO:0032264"}]},"cv_name":"biological_process","definition":"Any process which produces inosine monophosphate from derivatives of it, without de novo synthesis.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"IMP biosynthetic process","termid":"GO:0006188"},{"relation_name":"is_a","term_name":"purine ribonucleotide salvage","termid":"GO:0106380"}],"gene_count":2,"genes_by_uniquename":{"SJAG_04123":null,"SJAG_06634":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"IMP salvage","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000041":null},"termid":"GO:0032264","terms_by_termid":{"GO:0032264":null}}


id: GO:1900373
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of purine nucleotide biosynthetic processes.","definition_xrefs":["GOC:TermGenie","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of nucleotide biosynthetic process","termid":"GO:0030810"},{"relation_name":"is_a","term_name":"regulation of purine nucleotide biosynthetic process","termid":"GO:1900371"},{"relation_name":"is_a","term_name":"positive regulation of purine nucleotide metabolic process","termid":"GO:1900544"},{"relation_name":"positively_regulates","term_name":"purine nucleotide biosynthetic process","termid":"GO:0006164"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055086"},{"rel_name":"positively_regulates","termid":"GO:0055086"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"positive regulation of purine nucleotide biosynthetic process","synonyms":[{"name":"activation of purine nucleotide anabolism","type":"exact"},{"name":"activation of purine nucleotide biosynthesis","type":"exact"},{"name":"activation of purine nucleotide biosynthetic process","type":"narrow"},{"name":"activation of purine nucleotide formation","type":"exact"},{"name":"activation of purine nucleotide synthesis","type":"exact"},{"name":"positive regulation of purine nucleotide anabolism","type":"exact"},{"name":"positive regulation of purine nucleotide biosynthesis","type":"exact"},{"name":"positive regulation of purine nucleotide formation","type":"exact"},{"name":"positive regulation of purine nucleotide synthesis","type":"exact"},{"name":"up regulation of purine nucleotide anabolism","type":"exact"},{"name":"up regulation of purine nucleotide biosynthesis","type":"exact"},{"name":"up regulation of purine nucleotide biosynthetic process","type":"exact"},{"name":"up regulation of purine nucleotide formation","type":"exact"},{"name":"up regulation of purine nucleotide synthesis","type":"exact"},{"name":"up-regulation of purine nucleotide anabolism","type":"exact"},{"name":"up-regulation of purine nucleotide biosynthesis","type":"exact"},{"name":"up-regulation of purine nucleotide biosynthetic process","type":"exact"},{"name":"up-regulation of purine nucleotide formation","type":"exact"},{"name":"up-regulation of purine nucleotide synthesis","type":"exact"},{"name":"upregulation of purine nucleotide anabolism","type":"exact"},{"name":"upregulation of purine nucleotide biosynthesis","type":"exact"},{"name":"upregulation of purine nucleotide biosynthetic process","type":"exact"},{"name":"upregulation of purine nucleotide formation","type":"exact"},{"name":"upregulation of purine nucleotide synthesis","type":"exact"}],"termid":"GO:1900373"}


id: GO:0000473
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in the maturation of a precursor Large SubUnit (LSU) ribosomal RNA (rRNA) molecule into a mature LSU-rRNA molecule from the pre-rRNA molecule originally produced as a tetracistronic rRNA transcript that contains the Small Subunit (SSU) rRNA, 5.8 S rRNA, 2S rRNA, and Large Subunit (LSU) in that order from 5' to 3' along the primary transcript.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maturation of LSU-rRNA","termid":"GO:0000470"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0042254"}],"interesting_parent_ids":["GO:0042254","GO:0008150","GO:0044085","GO:0010467"],"is_obsolete":false,"name":"maturation of LSU-rRNA from tetracistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, 2S rRNA, LSU-rRNA)","termid":"GO:0000473"}


id: PBO:0079508
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thioredoxin pseudogene 6","termid":"PBO:0079508"}


id: SO:0002193
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The pseudogene has arisen by reverse transcription of a mRNA into cDNA, followed by reintegration into the genome. Therefore, it has lost any intron/exon structure, and it might have a pseudo-polyA-tail.","direct_ancestors":[{"relation_name":"is_a","term_name":"pseudogenic_rRNA","termid":"SO:0000777"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"processed_pseudogenic_rRNA","synonyms":[{"name":"INSDC_feature:rRNA","type":"broad"},{"name":"INSDC_qualifier:processed","type":"exact"},{"name":"processed pseudogenic rRNA","type":"exact"}],"termid":"SO:0002193"}


id: GO:0035513
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The removal of the methyl group from one or more nucleotides within an RNA molecule involving oxidation (i.e. electron loss) of one or more atoms.","definition_xrefs":["PMID:18775698","PMID:12594517","PMID:16482161"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA modification","termid":"GO:0009451"},{"relation_name":"is_a","term_name":"oxidative demethylation","termid":"GO:0070989"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"oxidative RNA demethylation","termid":"GO:0035513"}


id: MONDO:1010025
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Wolff-Parkinson-White syndrome that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiomyopathy, non-human animal","termid":"MONDO:1010010"},{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Wolff-Parkinson-White syndrome, non-human animal","secondary_identifiers":["OMIA:001194"],"termid":"MONDO:1010025","xrefs":{"Monarch":{"xref_id":"1010025"}}}


id: FYPO:0005116
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a protein is localized to discrete regions in the nucleus, visible as foci or dots by microscopy, to a greater extent observed than in normal (wild type) cells.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mislocalized protein during vegetative growth","termid":"FYPO:0000782"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"increased punctate nuclear protein localization","synonyms":[{"name":"increased protein localization to nuclear puncta","type":"exact"},{"name":"increased punctate nuclear protein localisation","type":"exact"},{"name":"increased punctate nuclear protein localization during mitotic cell cycle","type":"related"},{"name":"increased punctate nuclear protein localization during vegetative growth","type":"exact"}],"termid":"FYPO:0005116"}


id: MOD:00041
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-glutamic acid residue to L-gamma-carboxyglutamic acid.","definition_xrefs":["Unimod:299#E","PubMed:1807167","DeltaMass:217","PubMed:10517147","OMSSA:48","PubMed:7457858","RESID:AA0032","PubMed:8135347","PubMed:4528109","PubMed:9188685","PubMed:8868490","PubMed:3263814"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-glutamic acid residue","termid":"MOD:00906"},{"relation_name":"is_a","term_name":"carboxylated residue","termid":"MOD:01152"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-gamma-carboxyglutamic acid","synonyms":[{"name":"(3S)-3-aminopropane-1,1,3-tricarboxylic acid","type":"exact"},{"name":"(3S)-3-azanylpropane-1,1,3-tricarboxylic acid","type":"exact"},{"name":"1-carboxyglutamic acid","type":"related"},{"name":"3-amino-1,1,3-propanetricarboxylic acid","type":"exact"},{"name":"3-azanylpropane-1,1,3-tricarboxylic acid","type":"exact"},{"name":"4-carboxyglutamic acid","type":"exact"},{"name":"4CbxGlu","type":"exact"},{"name":"Carboxy","type":"related"},{"name":"Carboxy Glutamyl","type":"exact"},{"name":"Carboxylation","type":"related"},{"name":"L-gamma-carboxyglutamic acid","type":"exact"},{"name":"MOD_RES 4-carboxyglutamate","type":"exact"},{"name":"gamma-carboxylated L-glutamic acid","type":"exact"},{"name":"gammacarboxyle","type":"exact"}],"termid":"MOD:00041"}


id: PBO:0000473
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAGA complex ubiquitin C-terminal hydrolase Ubp8","termid":"PBO:0000473"}


id: PBO:0057056
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 141","termid":"PBO:0057056"}


id: MOD:00483
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that is produced by reaction with N-ethylmaleimide.","definition_xrefs":["PubMed:11813307","Unimod:108#C","OMSSA:83","PubMed:12777388"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"},{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"N-ethylmaleimide derivatized cysteine","synonyms":[{"name":"N-ethylmaleimide on cysteines","type":"related"},{"name":"Nethylmaleimide","type":"related"},{"name":"nemc","type":"exact"}],"termid":"MOD:00483"}


id: GO:1901666
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of NAD+ ADP-ribosyltransferase activity.","definition_xrefs":["GOC:TermGenie","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of transferase activity","termid":"GO:0051347"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of NAD+ ADP-ribosyltransferase activity","synonyms":[{"name":"activation of ADP-ribosyltransferase (polymerizing) activity","type":"exact"},{"name":"activation of NAD ADP-ribosyltransferase activity","type":"exact"},{"name":"activation of NAD+ ADP-ribosyltransferase activity","type":"narrow"},{"name":"activation of NAD+:poly(adenine-diphosphate-D-ribosyl)-acceptor ADP-D-ribosyl-transferase activity","type":"exact"},{"name":"activation of poly(ADP-ribose) synthase activity","type":"exact"},{"name":"activation of poly(ADP-ribose) synthetase activity","type":"exact"},{"name":"activation of poly(ADP-ribose)polymerase activity","type":"exact"},{"name":"activation of poly(adenosine diphosphate ribose) polymerase activity","type":"exact"},{"name":"positive regulation of ADP-ribosyltransferase (polymerizing) activity","type":"exact"},{"name":"positive regulation of NAD ADP-ribosyltransferase activity","type":"exact"},{"name":"positive regulation of NAD+:poly(adenine-diphosphate-D-ribosyl)-acceptor ADP-D-ribosyl-transferase activity","type":"exact"},{"name":"positive regulation of poly(ADP-ribose) synthase activity","type":"exact"},{"name":"positive regulation of poly(ADP-ribose) synthetase activity","type":"exact"},{"name":"positive regulation of poly(ADP-ribose)polymerase activity","type":"exact"},{"name":"positive regulation of poly(adenosine diphosphate ribose) polymerase activity","type":"exact"},{"name":"up regulation of ADP-ribosyltransferase (polymerizing) activity","type":"exact"},{"name":"up regulation of NAD ADP-ribosyltransferase activity","type":"exact"},{"name":"up regulation of NAD+ ADP-ribosyltransferase activity","type":"exact"},{"name":"up regulation of NAD+:poly(adenine-diphosphate-D-ribosyl)-acceptor ADP-D-ribosyl-transferase activity","type":"exact"},{"name":"up regulation of poly(ADP-ribose) synthase activity","type":"exact"},{"name":"up regulation of poly(ADP-ribose) synthetase activity","type":"exact"},{"name":"up regulation of poly(ADP-ribose)polymerase activity","type":"exact"},{"name":"up regulation of poly(adenosine diphosphate ribose) polymerase activity","type":"exact"},{"name":"up-regulation of ADP-ribosyltransferase (polymerizing) activity","type":"exact"},{"name":"up-regulation of NAD ADP-ribosyltransferase activity","type":"exact"},{"name":"up-regulation of NAD+ ADP-ribosyltransferase activity","type":"exact"},{"name":"up-regulation of NAD+:poly(adenine-diphosphate-D-ribosyl)-acceptor ADP-D-ribosyl-transferase activity","type":"exact"},{"name":"up-regulation of poly(ADP-ribose) synthase activity","type":"exact"},{"name":"up-regulation of poly(ADP-ribose) synthetase activity","type":"exact"},{"name":"up-regulation of poly(ADP-ribose)polymerase activity","type":"exact"},{"name":"up-regulation of poly(adenosine diphosphate ribose) polymerase activity","type":"exact"},{"name":"upregulation of ADP-ribosyltransferase (polymerizing) activity","type":"exact"},{"name":"upregulation of NAD ADP-ribosyltransferase activity","type":"exact"},{"name":"upregulation of NAD+ ADP-ribosyltransferase activity","type":"exact"},{"name":"upregulation of NAD+:poly(adenine-diphosphate-D-ribosyl)-acceptor ADP-D-ribosyl-transferase activity","type":"exact"},{"name":"upregulation of poly(ADP-ribose) synthase activity","type":"exact"},{"name":"upregulation of poly(ADP-ribose) synthetase activity","type":"exact"},{"name":"upregulation of poly(ADP-ribose)polymerase activity","type":"exact"},{"name":"upregulation of poly(adenosine diphosphate ribose) polymerase activity","type":"exact"}],"termid":"GO:1901666"}


id: GO:1905906
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of amyloid fibril formation.","definition_xrefs":["GO_REF:0000058","GOC:bc","GOC:TermGenie","PMID:23106396","GOC:aruk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein metabolic process","termid":"GO:0051246"},{"relation_name":"is_a","term_name":"regulation of supramolecular fiber organization","termid":"GO:1902903"},{"relation_name":"regulates","term_name":"amyloid fibril formation","termid":"GO:1990000"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of amyloid fibril formation","synonyms":[{"name":"regulation of amyloid fibril assembly","type":"related"},{"name":"regulation of amyloid structure assembly","type":"related"},{"name":"regulation of amyloid structure formation","type":"related"}],"termid":"GO:1905906"}


id: MONDO:0003752
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A papilloma that arises from the ciliated respiratory mucosa that lines the frontal sinus. It is classified as inverted papilloma and oncocytic papilloma.","definition_xrefs":["NCIT:C6837"],"direct_ancestors":[{"relation_name":"is_a","term_name":"paranasal sinus Schneiderian papilloma","termid":"MONDO:0006353"},{"relation_name":"is_a","term_name":"benign neoplasm of frontal sinus","termid":"MONDO:0021483"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"frontal sinus Schneiderian papilloma","secondary_identifiers":["UMLS:C1333645","MEDGEN:234273","DOID:6054"],"synonyms":[{"name":"Schneiderian papilloma of frontal sinus","type":"related"},{"name":"Schneiderian papilloma of the frontal sinus","type":"exact"},{"name":"frontal sinus Schneiderian papilloma","type":"exact"}],"termid":"MONDO:0003752","xrefs":{"Monarch":{"xref_id":"0003752"}}}


id: _global:is_active_in
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"c executes activity in d if and only if c enables p and p occurs_in d.  Assuming no action at a distance by gene products, if a gene product enables (is capable of) a process that occurs in some structure, it must have at least some part in that structure.","direct_ancestors":[{"relation_name":"is_a","term_name":"functionally_related_to","termid":"_global:functionally_related_to"},{"relation_name":"is_a","term_name":"overlaps","termid":"_global:overlaps"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"is_active_in","secondary_identifiers":["RO:0002432"],"synonyms":[{"name":"enables activity in","type":"exact"}],"termid":"_global:is_active_in"}


id: MONDO:0004616
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A painful blister of the periungual skin that is caused by herpes simplex virus type 1 or 2.","definition_xrefs":["NCIT:C128402"],"direct_ancestors":[{"relation_name":"is_a","term_name":"herpes simplex infectious disease","termid":"MONDO:0004609"},{"relation_name":"is_a","term_name":"paronychia","termid":"MONDO:0005898"},{"relation_name":"is_a","term_name":"skin disorder caused by infection","termid":"MONDO:0024294"},{"relation_name":"is_a","term_name":"nail infection","termid":"MONDO:0024487"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"herpetic whitlow","secondary_identifiers":["SCTID:43891009","DOID:8607","ICD9:054.6","MEDGEN:509122","UMLS:C0153042"],"synonyms":[{"name":"Simplexvirus caused paronychia (disease)","type":"exact"},{"name":"Simplexvirus paronychia (disease)","type":"exact"},{"name":"herpetic felon","type":"exact"}],"termid":"MONDO:0004616","xrefs":{"Monarch":{"xref_id":"0004616"}}}


id: MONDO:0008706
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ackerman syndrome is characterized by pyramidal molar roots and taurodontism, associated with variable anomalies. It has been described in two generations of one family. Both parents and their six sibs had pyramidal, taurodont or fused molar roots. Some of the patients also had hypotrichosis, an abnormal upper lip, thickened and wide philtrum, and/or juvenile glaucoma. Other features included entropion of the eyelid, syndactyly and clinodactyly of the fifth fingers.","definition_xrefs":["Orphanet:2561"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"},{"relation_name":"is_a","term_name":"ectodermal dysplasia syndrome","termid":"MONDO:0019287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"Ackerman syndrome","secondary_identifiers":["MESH:C538170","OMIM:200970","SCTID:722280000","UMLS:C1860167","MEDGEN:395426","icd11.foundation:1946127088","GARD:469"],"synonyms":[{"name":"Ackerman fused molar rooth syndrome","type":"exact"},{"name":"Ackerman syndrome","type":"exact"},{"name":"glaucoma, juvenile, with unusual upper lip and dental roots","type":"related"},{"name":"juvenile glaucoma with unusual upper lip and dental roots","type":"related"},{"name":"molar roots, pyramidal, with juvenile glaucoma and unusual upper lip","type":"related"},{"name":"pyramidal molar-glaucoma-upper abnormal lip syndrome","type":"exact"},{"name":"pyramidal molars, glaucoma, abnormal upper lip","type":"related"}],"termid":"MONDO:0008706","xrefs":{"Monarch":{"xref_id":"0008706"}}}


id: PBO:0088380
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyoxylate reductase","termid":"PBO:0088380"}


id: PBO:0066357
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"REST corepressor 1","termid":"PBO:0066357"}


id: PBO:0078262
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Cys (anticodon GCA) 1-1","termid":"PBO:0078262"}


id: GO:1904660
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of sensory perception of bitter taste.","definition_xrefs":["GO_REF:0000058","GOC:mr","GOC:TermGenie","PMID:1716172"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of sensory perception","termid":"GO:0051931"},{"relation_name":"regulates","term_name":"sensory perception of bitter taste","termid":"GO:0050913"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of sensory perception of bitter taste","synonyms":[{"name":"regulation of bitter taste perception","type":"exact"}],"termid":"GO:1904660"}


id: PBO:0108697
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ArfGEF Sec74","termid":"PBO:0108697"}


id: PBO:0083420
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the uncharacterized gene YNL144C","termid":"PBO:0083420"}


id: MONDO:0000805
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A allergic disease involving a snail food product.","definition_xrefs":["MONDO:patterns/allergy"],"gene_count":0,"genotype_count":0,"name":"obsolete snail allergy (obsolete MONDO:0000805)","secondary_identifiers":["DOID:0060530"],"synonyms":[{"name":"allergy of snail food product","type":"exact"},{"name":"snail food product allergic disease","type":"exact"}],"termid":"MONDO:0000805","xrefs":{"Monarch":{"xref_id":"0000805"}}}


id: PR:Q9P7W9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A ribonuclease P protein subunit p29 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR13348:SF0","PRO:DNx","OMA:SCHPO03472"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonuclease P protein subunit 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1703.01c","secondary_identifiers":["UniProtKB:Q9P7W9"],"synonyms":[{"name":"Spom972h-POP4","type":"exact"}],"termid":"PR:Q9P7W9"}


id: PBO:0078906
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gln (anticodon CTG) 15-1","termid":"PBO:0078906"}


id: PR:Q7Z9I3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC663.08c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q7Z9I3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized oxidoreductase C663.08c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC663.08c","synonyms":[{"name":"Spom972h-SPCC663.08c","type":"exact"}],"termid":"PR:Q7Z9I3"}


id: GO:0046853
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process of introducing a phosphate group into inositol or a phosphatidylinositol. Inositol is the cyclic alcohol 1,2,3,4,5,6-cyclohexanehexol, which is widely distributed in nature and acts as a growth factor in animals and microorganisms.","definition_xrefs":["ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete inositol or phosphatidylinositol phosphorylation (obsolete GO:0046853)","synonyms":[{"name":"inositol and derivative phosphorylation","type":"related"},{"name":"inositol or phosphatidylinositol phosphorylation","type":"exact"},{"name":"myo-inositol and derivative phosphorylation","type":"related"},{"name":"myo-inositol or phosphatidyl-myo-inositol phosphorylation","type":"narrow"}],"termid":"GO:0046853"}


id: FYPO:0001935
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of proton-transporting ATP synthase activity by a rotational mechanism is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"},{"relation_name":"is_a","term_name":"abnormal metabolic process","termid":"FYPO:0000860"},{"relation_name":"is_a","term_name":"abnormal transmembrane transporter activity","termid":"FYPO:0002116"},{"relation_name":"is_a","term_name":"abnormal proton transport","termid":"FYPO:0005971"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0002114"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0005447","FYPO:0000002","FYPO:0000661","FYPO:0002114","FYPO:0000654","FYPO:0001985","FYPO:0000652","FYPO:0000138"],"is_obsolete":false,"name":"abnormal proton-transporting ATP synthase activity, rotational mechanism","synonyms":[{"name":"abnormal hydrogen ion transporting ATP synthase activity, rotational mechanism","type":"exact"},{"name":"abnormal mitochondrial proton-transporting ATP synthase activity","type":"narrow"},{"name":"abnormal proton-transporting ATP synthase activity","type":"related"}],"termid":"FYPO:0001935"}


id: PR:Q9UUE7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cdc73 gene.","definition_xrefs":["UniProtKB:Q9UUE7","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell division control protein 73 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC17G9.02c","synonyms":[{"name":"Spom972h-cdc73","type":"exact"}],"termid":"PR:Q9UUE7"}


id: PBO:0089213
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP 3'tRNA nucleotidyltransferase Cca2","termid":"PBO:0089213"}


id: PBO:0076573
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TBC1D3P1-DHX40P1 readthrough, transcribed pseudogene","termid":"PBO:0076573"}


id: MONDO:0007874
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Langer-Giedon syndrome, also known as trichorhinophalangeal syndrome type 2, is a very rare, genetic, multiple congenital anomaly disorder characterized by bone abnormalities, distinctive facial features, multiple exostoses, and intellectual disability.","definition_xrefs":["Orphanet:502"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"partial deletion of the long arm of chromosome 8","termid":"MONDO:0016907"},{"relation_name":"is_a","term_name":"trichorhinophalangeal syndrome","termid":"MONDO:0017951"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0005093"],"is_obsolete":false,"name":"trichorhinophalangeal syndrome type II","secondary_identifiers":["icd11.foundation:315453775","MedDRA:10050638","NCIT:C75118","MEDGEN:6009","GARD:7801","OMIM:150230","ICD9:759.89","MESH:D015826","UMLS:C0023003","SCTID:41069008","DOID:4998"],"synonyms":[{"name":"Giedion-Langer syndrome","type":"related"},{"name":"Langer Giedion syndrome","type":"related"},{"name":"Langer-Giedion syndrome","type":"exact"},{"name":"TRPS 2","type":"related"},{"name":"TRPS2","type":"related"},{"name":"chromosome 8Q24.1 deletion syndrome","type":"related"},{"name":"deletion 8q24.1","type":"exact"},{"name":"monosomy 8q24.1","type":"exact"},{"name":"trichorhinophalangeal dysplasia type II","type":"exact"},{"name":"trichorhinophalangeal syndrome type 2","type":"exact"},{"name":"trichorhinophalangeal syndrome, type 2","type":"related"},{"name":"trichorhinophalangeal syndrome, type II","type":"related"}],"termid":"MONDO:0007874","xrefs":{"Monarch":{"xref_id":"0007874"}}}


id: GO:0009019
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: S-adenosyl-L-methionine + tRNA = S-adenosyl-L-homocysteine + tRNA containing N1-methylguanine.","definition_xrefs":["PMID:782564","GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete tRNA (guanine-N1-)-methyltransferase activity (obsolete GO:0009019)","synonyms":[{"name":"S-adenosyl-L-methionine:tRNA (guanine-1-N-)-methyltransferase activity","type":"related"},{"name":"S-adenosyl-L-methionine:tRNA (guanine-N1-)-methyltransferase activity","type":"related"},{"name":"tRNA guanine 1-methyltransferase activity","type":"related"},{"name":"transfer ribonucleate guanine 1-methyltransferase activity","type":"related"}],"termid":"GO:0009019"}


id: PATO:0002495
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An orientation quality inhering in a bearer by virtue of the bearer having a position that is directed dorsally.","definition_xrefs":["PATOC:WD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"orientation","termid":"PATO:0000133"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dorsal orientation","synonyms":[{"name":"dorsally directed","type":"exact"}],"termid":"PATO:0002495"}


id: PBO:0058949
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"marker of proliferation Ki-67 pseudogene 1","termid":"PBO:0058949"}


id: GO:0003815
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the selective cleavage of Lys(or Arg)-Ile bond in complement subcomponent C1s to form the active form of C1s (EC:3.4.21.42).","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete complement component C1r activity (obsolete GO:0003815)","synonyms":[{"name":"C1r esterase activity","type":"related"},{"name":"activated complement C1r","type":"related"},{"name":"complement component C1r activity","type":"exact"},{"name":"complement subcomponent C1r","type":"related"}],"termid":"GO:0003815"}


id: PBO:0091120
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protease inhibitor 178 family","termid":"PBO:0091120"}


id: GO:0007215
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by the binding of glutamate to its receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:mah","GOC:signaling","PMID:9131252"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell surface receptor signaling pathway","termid":"GO:0007166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"glutamate receptor signaling pathway","synonyms":[{"name":"glutamate signaling pathway","type":"exact"},{"name":"glutamate signalling pathway","type":"exact"}],"termid":"GO:0007215"}


id: PBO:0076301
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synaptic Ras GTPase activating protein 1","termid":"PBO:0076301"}


id: GO:0000053
data:
  {"annotated_genes":["SJAG_04577"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[70927],"is_not":false,"summary":null,"term":"GO:0000053"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving argininosuccinate, 2-(N(omega)-arginino)succinate, an intermediate in the ornithine-urea cycle, where it is synthesized from citrulline and aspartate.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified amino acid metabolic process","termid":"GO:0006575"},{"relation_name":"is_a","term_name":"tricarboxylic acid metabolic process","termid":"GO:0072350"},{"relation_name":"is_a","term_name":"L-amino acid metabolic process","termid":"GO:0170033"},{"relation_name":"is_a","term_name":"non-proteinogenic amino acid metabolic process","termid":"GO:0170041"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04577":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0006520","GO:0008150"],"is_obsolete":false,"name":"argininosuccinate metabolic process","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"argininosuccinate metabolism","type":"exact"}],"termid":"GO:0000053","terms_by_termid":{"GO:0000053":null}}


id: PBO:0056656
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit 23","termid":"PBO:0056656"}


id: GO:1905342
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of protein localization to kinetochore.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:22581055"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein localization","termid":"GO:1903829"},{"relation_name":"is_a","term_name":"regulation of protein localization to kinetochore","termid":"GO:1905340"},{"relation_name":"positively_regulates","term_name":"protein localization to kinetochore","termid":"GO:0034501"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of protein localization to kinetochore","synonyms":[{"name":"activation of condensin localization to kinetochore","type":"narrow"},{"name":"activation of protein localisation to kinetochore","type":"narrow"},{"name":"activation of protein localization to kinetochore","type":"narrow"},{"name":"positive regulation of condensin localization to kinetochore","type":"narrow"},{"name":"positive regulation of protein localisation to kinetochore","type":"exact"},{"name":"up regulation of condensin localization to kinetochore","type":"narrow"},{"name":"up regulation of protein localisation to kinetochore","type":"exact"},{"name":"up regulation of protein localization to kinetochore","type":"exact"},{"name":"up-regulation of condensin localization to kinetochore","type":"narrow"},{"name":"up-regulation of protein localisation to kinetochore","type":"exact"},{"name":"up-regulation of protein localization to kinetochore","type":"exact"},{"name":"upregulation of condensin localization to kinetochore","type":"narrow"},{"name":"upregulation of protein localisation to kinetochore","type":"exact"},{"name":"upregulation of protein localization to kinetochore","type":"exact"}],"termid":"GO:1905342"}


id: MONDO:0019111
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Familial thrombocytosis is a type of thrombocytosis, a sustained elevation of platelet numbers, which affects the platelet/megakaryocyte lineage and may create a tendency for thrombosis and hemorrhage but does not cause myeloproliferation.","definition_xrefs":["Orphanet:71493"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thrombocytosis disease","termid":"MONDO:0002249"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"familial thrombocytosis","secondary_identifiers":["GARD:16688","icd11.foundation:1695088249","SCTID:720950009","OMIMPS:187950","MEDGEN:929430","UMLS:C4303761"],"synonyms":[{"name":"THCYT","type":"exact"},{"name":"familial thrombocythemia","type":"exact"},{"name":"hereditary thrombocythemia","type":"exact"},{"name":"hereditary thrombocytosis","type":"exact"},{"name":"hereditary thrombocytosis disease","type":"exact"},{"name":"thrombocythemia","type":"related"}],"termid":"MONDO:0019111","xrefs":{"Monarch":{"xref_id":"0019111"}}}


id: PBO:0004010
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"folliculin ortholog Bhd1","termid":"PBO:0004010"}


id: FYPO:0004395
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A spindle phenotype in which the mitotic spindle is shorter than normal during metaphase.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"short bipolar mitotic spindle","termid":"FYPO:0000732"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000120"}],"interesting_parent_ids":["FYPO:0000120","FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0002399","FYPO:0000002","FYPO:0000054"],"is_obsolete":false,"name":"short bipolar mitotic spindle during metaphase","synonyms":[{"name":"decreased mitotic spindle length during metaphase","type":"exact"},{"name":"short mitotic spindle during metaphase","type":"exact"},{"name":"short mitotic spindle during metaphase during vegetative growth","type":"exact"},{"name":"short mitotic spindles during metaphase","type":"exact"},{"name":"short spindle during mitotic metaphase","type":"exact"}],"termid":"FYPO:0004395"}


id: MONDO:0022946
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deafness progressive cataract autosomal dominant","termid":"MONDO:0022946","xrefs":{"Monarch":{"xref_id":"0022946"}}}


id: PBO:0054792
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2205","termid":"PBO:0054792"}


id: MONDO:0015424
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete lethal chondrodysplasia, Moerman type (obsolete MONDO:0015424)","secondary_identifiers":["Orphanet:1420","GARD:3225"],"synonyms":[{"name":"Moerman-Vandenberghe-Fryns syndrome","type":"exact"},{"name":"lethal chondrodysplasia Moerman type","type":"related"}],"termid":"MONDO:0015424","xrefs":{"Monarch":{"xref_id":"0015424"}}}


id: GO:1904501
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of chromatin-mediated maintenance of transcription.","definition_xrefs":["GO_REF:0000058","GOC:nc","GOC:BHF_telomere","GOC:BHF","GOC:TermGenie","PMID:22723415"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of chromatin-mediated maintenance of transcription (obsolete GO:1904501)","synonyms":[{"name":"activation of chromatin-mediated maintenance of transcription","type":"narrow"},{"name":"up regulation of chromatin-mediated maintenance of transcription","type":"exact"},{"name":"up-regulation of chromatin-mediated maintenance of transcription","type":"exact"},{"name":"upregulation of chromatin-mediated maintenance of transcription","type":"exact"}],"termid":"GO:1904501"}


id: GO:0036361
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the interconversion of the two enantiomers of a chiral amino acid or amino acid derivative.","definition_xrefs":["GOC:crds"],"gene_count":0,"genotype_count":0,"name":"obsolete racemase activity, acting on amino acids and derivatives (obsolete GO:0036361)","termid":"GO:0036361"}


id: MONDO:0100082
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Noonan syndrome with multiple lentigines in which the cause of the disease is a heterozygous mutation in the PTPN11 gene on chromosome 12q24.","definition_xrefs":["PMID:12058348","OMIM:151100"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Noonan syndrome with multiple lentigines","termid":"MONDO:0007893"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267","MONDO:0000426"],"is_obsolete":false,"name":"LEOPARD syndrome 1","secondary_identifiers":["DOID:0080548","UMLS:C4551484","MEDGEN:1631694"],"synonyms":[{"name":"LEOPARD syndrome 1","type":"exact"},{"name":"LEOPARD syndrome type 1","type":"exact"},{"name":"LPRD1","type":"exact"},{"name":"lentiginosis, cardiomyopathic","type":"exact"},{"name":"multiple lentigines syndrome","type":"exact"}],"termid":"MONDO:0100082","xrefs":{"Monarch":{"xref_id":"0100082"}}}


id: PBO:0072393
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS27A pseudogene 19","termid":"PBO:0072393"}


id: PR:Q9P786
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A bifunctional methylenetetrahydrofolate dehydrogenase/cyclohydrolase, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methylenetetrahydrofolate dehydrogenase [NAD(+)] (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1711.04","secondary_identifiers":["UniProtKB:Q9P786"],"synonyms":[{"name":"SPBC1711.04","type":"related"},{"name":"Spom972h-MTHFD2","type":"exact"}],"termid":"PR:Q9P786"}


id: MONDO:0044279
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete bone mineral density quantitative trait locus 15 (obsolete MONDO:0044279)","secondary_identifiers":["OMIM:613418"],"synonyms":[{"name":"BMND15","type":"related"},{"name":"bone mineral density QTL 15","type":"exact"},{"name":"bone mineral density quantitative trait locus 15","type":"related"},{"name":"compression fracture, susceptibility to","type":"related"},{"name":"metaphyseal fracture, susceptibility to","type":"related"},{"name":"osteoporosis, susceptibility to","type":"related"}],"termid":"MONDO:0044279","xrefs":{"Monarch":{"xref_id":"0044279"}}}


id: PBO:0090350
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase AMPK (beta) regulatory subunit Amk2","termid":"PBO:0090350"}


id: PBO:0071432
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L31 pseudogene 38","termid":"PBO:0071432"}


id: PBO:0064501
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II subunit D","termid":"PBO:0064501"}


id: PBO:0046677
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"extended synaptotagmin 3","termid":"PBO:0046677"}


id: FYPO:0006390
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which a cell contains more than one meiotic spindle during one or both meiotic nuclear divisions.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiotic spindle","termid":"FYPO:0000734"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"is_a","termid":"FYPO:0000120"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000120","FYPO:0002399","FYPO:0000002","FYPO:0000054","FYPO:0005447"],"is_obsolete":false,"name":"multiple meiotic spindles","synonyms":[{"name":"additional meiotic spindles present","type":"exact"},{"name":"extra meiotic spindles","type":"exact"},{"name":"increased number of meiotic spindles","type":"exact"},{"name":"meiotic spindles present in greater numbers","type":"exact"},{"name":"multiple spindles during meiosis","type":"exact"}],"termid":"FYPO:0006390"}


id: MONDO:1010973
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hepatic encephalopathy that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hepatic encephalopathy, non-human animal","termid":"MONDO:1010230"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hepatic encephalopathy, dog","secondary_identifiers":["OMIA:000453-9615"],"termid":"MONDO:1010973","xrefs":{"Monarch":{"xref_id":"1010973"}}}


id: MOD:00564
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"Modification from Unimod Isotopic label. The Unimod term was extracted when it had not been approved. OBSOLETE because redundant to MOD:01505. Remap to MOD:01505, or one of the child terms MOD:01493 or MOD:01497.","definition_xrefs":["Unimod:214","URL:http://docs.appliedbiosystems.com/pebiodocs/04351918.pdf"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE MOD:00564 Applied Biosystems iTRAQ(TM) multiplexed quantitation chemistry (obsolete MOD:00564)","synonyms":[{"name":"Representative mass and accurate mass for 116 & 117","type":"related"},{"name":"iTRAQ4plex","type":"related"}],"termid":"MOD:00564"}


id: PBO:0065689
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pentraxin 3","termid":"PBO:0065689"}


id: PBO:0111949
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNAJ domain","termid":"PBO:0111949"}


id: PBO:0054040
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1376","termid":"PBO:0054040"}


id: PBO:0082991
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytosolic copper metallochaperone; transports copper to the secretory vesicle copper transporter Ccc2p for eventual insertion into Fet3p, which is a multicopper oxidase required for high-affinity iron uptake; human homolog ATOX1 can complement yeast atx1 mutant; overexpression of human ATOX1 suppresses lysine auxotrophy of the yeast sod1 null mutant, as does overexpression of yeast ATX1","termid":"PBO:0082991"}


id: PBO:0047515
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FEV transcription factor, ETS family member","termid":"PBO:0047515"}


id: MONDO:0045012
data:
  {"annotated_genes":["SJAG_04270","SJAG_03024","SJAG_02696","SJAG_01474","SJAG_02148","SJAG_00717","SJAG_02855","SJAG_03509","SJAG_04865","SJAG_03018","SJAG_04810"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85701],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010621"},{"annotations":[87612],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013310"},{"annotations":[85935,85936],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011503"},{"annotations":[86425],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008974"},{"annotations":[87117,87116],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009849"},{"annotations":[86985,86984],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011816"},{"annotations":[85442,85443],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012481"},{"annotations":[86156],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014793"},{"annotations":[87583],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010035"}]},"cv_name":"mondo","definition":"A disease that has its basis in the disruption of steroid metabolic process.","definition_xrefs":["MONDO:design_pattern"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic disease","termid":"MONDO:0005066"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00717":null,"SJAG_01474":null,"SJAG_02148":null,"SJAG_02696":null,"SJAG_02855":null,"SJAG_03018":null,"SJAG_03024":null,"SJAG_03509":null,"SJAG_04270":null,"SJAG_04810":null,"SJAG_04865":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"steroid metabolism disease","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:28710006","UMLS:C0268283","MEDGEN:541265"],"synonyms":[{"name":"disorder of steroid metabolic process","type":"exact"},{"name":"disorder of steroid metabolism","type":"exact"},{"name":"steroid metabolic process disease","type":"exact"},{"name":"steroid metabolism disease","type":"exact"}],"termid":"MONDO:0045012","terms_by_termid":{"MONDO:0008974":null,"MONDO:0009849":null,"MONDO:0010035":null,"MONDO:0010621":null,"MONDO:0011503":null,"MONDO:0011816":null,"MONDO:0012481":null,"MONDO:0013310":null,"MONDO:0014793":null},"xrefs":{"Monarch":{"xref_id":"0045012"}}}


id: GO:0016994
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: precorrin-6B + NADP+ = precorrin-6A + NADPH + H+.","definition_xrefs":["EC:1.3.1.54"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"precorrin-6A reductase activity","secondary_identifiers":["RHEA:23408","MetaCyc:1.3.1.54-RXN"],"synonyms":[{"name":"precorrin-6B:NADP+ oxidoreductase activity","type":"related"},{"name":"precorrin-6X reductase activity","type":"exact"},{"name":"precorrin-6Y:NADP(+) oxidoreductase activity","type":"related"},{"name":"precorrin-6Y:NADP+ oxidoreductase activity","type":"related"}],"termid":"GO:0016994"}


id: MONDO:0002460
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A cancer that involves the lacrimal apparatus.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"ocular cancer","termid":"MONDO:0002236"},{"relation_name":"is_a","term_name":"lacrimal apparatus disorder","termid":"MONDO:0001854"},{"relation_name":"is_a","term_name":"ocular cancer","termid":"MONDO:0002236"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005328"],"is_obsolete":false,"name":"lacrimal system cancer","secondary_identifiers":["SCTID:416510003","MEDGEN:272790","NCIT:C5102","UMLS:C1334361","DOID:292"],"synonyms":[{"name":"cancer of lacrimal apparatus","type":"exact"},{"name":"lacrimal apparatus cancer","type":"exact"},{"name":"lacrimal system neoplasm","type":"exact"},{"name":"lacrimal system neoplasms","type":"exact"},{"name":"lacrimal system tumor","type":"exact"},{"name":"lacrimal system tumour","type":"exact"},{"name":"malignant lacrimal apparatus neoplasm","type":"exact"},{"name":"malignant neoplasm of lacrimal apparatus","type":"exact"},{"name":"neoplasm of lacrimal system","type":"exact"},{"name":"neoplasm of the lacrimal system","type":"exact"},{"name":"tumor of lacrimal system","type":"exact"},{"name":"tumor of the lacrimal system","type":"exact"},{"name":"tumour of lacrimal system","type":"exact"},{"name":"tumour of the lacrimal system","type":"exact"}],"termid":"MONDO:0002460","xrefs":{"Monarch":{"xref_id":"0002460"}}}


id: PBO:0085226
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Part of actin cytoskeleton-regulatory complex Pan1p-Sla1p-End3p; associates with actin patches on cell cortex; promotes protein-protein interactions essential for endocytosis; binds to and activates Arp2/3 complex in vitro; phosphorylation of Thr-1225 is regulated by MAPK Hog1p in response to osmotic stress; previously thought to be a subunit of poly(A) ribonuclease","termid":"PBO:0085226"}


id: SO:0001278
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"1-methylinosine is a modified inosine.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_inosine","termid":"SO:0001274"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"one_methylinosine","secondary_identifiers":["RNAMOD:018"],"synonyms":[{"name":"1-methylinosine","type":"exact"},{"name":"m1I","type":"exact"},{"name":"one methylinosine","type":"exact"}],"termid":"SO:0001278"}


id: MONDO:0035764
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"idiopathic steroid-sensitive nephrotic syndrome","termid":"MONDO:0019067"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"idiopathic steroid-sensitive nephrotic syndrome with secondary steroid resistance","secondary_identifiers":["Orphanet:567546","MEDGEN:1830098","UMLS:C5680131","GARD:22286"],"synonyms":[{"name":"Idiopathic SSNS with secondary steroid resistance","type":"exact"},{"name":"Secondary SRNS","type":"exact"},{"name":"Secondary steroid-resistant nephrotic syndrome","type":"exact"}],"termid":"MONDO:0035764","xrefs":{"Monarch":{"xref_id":"0035764"}}}


id: GO:0010180
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a thioglucosidase enzyme.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme binding","termid":"GO:0019899"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"thioglucosidase binding","synonyms":[{"name":"myrosinase binding","type":"exact"}],"termid":"GO:0010180"}


id: MOD:00807
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-serine residue to pyruvic acid.","definition_xrefs":["PubMed:3042771","Unimod:385#S","PubMed:8464063","PubMed:10085076","RESID:AA0127#SER","DeltaMass:23"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-serine residue","termid":"MOD:00916"},{"relation_name":"is_a","term_name":"pyruvic acid","termid":"MOD:01154"},{"relation_name":"is_a","term_name":"deaminated residue","termid":"MOD:01160"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyruvic acid (Ser)","synonyms":[{"name":"2-oxopropanoic acid","type":"exact"},{"name":"MOD_RES Pyruvic acid (Ser)","type":"exact"},{"name":"Pyruvate","type":"exact"},{"name":"Pyruvoyl- (Serine)","type":"exact"},{"name":"pyruvic acid","type":"exact"}],"termid":"MOD:00807"}


id: PR:O94316
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 116 kDa U5 small nuclear ribonucleoprotein component that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR23115:SF5","PRO:DNx","OMA:SCHPO03969"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-mRNA-splicing factor cwf10 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC215.12","secondary_identifiers":["UniProtKB:O94316"],"synonyms":[{"name":"114 kDa U5 small nuclear ribonucleoprotein component homolog (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-EFTUD2","type":"exact"},{"name":"complexed with cdc5 protein 10 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94316"}


id: PR:Q9UTK0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An RNA-binding protein NOB1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR12814:SF0","OMA:SCHPO01341"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"20S-pre-rRNA D-site endonuclease nob1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1486.09","secondary_identifiers":["UniProtKB:Q9UTK0"],"synonyms":[{"name":"Spom972h-NOB1","type":"exact"},{"name":"pre-rRNA-processing endonuclease nob1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UTK0"}


id: PBO:0049938
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HERV-H LTR-associating 2","termid":"PBO:0049938"}


id: PBO:0052327
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KIAA1586","termid":"PBO:0052327"}


id: MONDO:0016575
data:
  {"annotated_genes":["SJAG_03794"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87569],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014909"}]},"cv_name":"mondo","definition":"A rare, genetically heterogeneous, primarily respiratory disorder characterized by chronic upper and lower respiratory tract disease. Approximately half of PCD patients have an organ laterality defect (situs inversus totalis or situs ambiguus/heterotaxy).","definition_xrefs":["Orphanet:244"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete male infertility due to sperm motility disorder (obsolete MONDO:0018395)","termid":"MONDO:0018395"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"respiratory system disorder","termid":"MONDO:0005087"},{"relation_name":"is_a","term_name":"ciliopathy","termid":"MONDO:0005308"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03794":null},"genotype_count":0,"is_obsolete":false,"name":"primary ciliary dyskinesia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIMPS:244400","SCTID:42402006","DOID:0050144","NANDO:2100034","DOID:9562","MESH:D007619","NANDO:2200204","icd11.foundation:1713839459","GARD:4484","MEDGEN:3467","MedDRA:10069713","SCTID:86204009","UMLS:C0008780","NCIT:C84797","NORD:1605","NANDO:2200203","MESH:D002925"],"synonyms":[{"name":"Dextrocardia bronchiectasis and sinusitis","type":"related"},{"name":"Dextrocardia-bronchiectasis-sinusitis syndrome","type":"related"},{"name":"ICS","type":"related"},{"name":"Immotile cilia syndrome, Kartagener type","type":"related"},{"name":"Kartagener syndrome","type":"exact"},{"name":"Kartagener's syndrome","type":"exact"},{"name":"PCD","type":"exact"},{"name":"Primary ciliary dyskinesia and situs inversus","type":"related"},{"name":"Primary ciliary dyskinesia, Kartagener type","type":"related"},{"name":"Siewert syndrome","type":"related"},{"name":"bronchiectasis, chronic sinusitis and dextrocardia syndrome","type":"related"},{"name":"ciliary dyskinesia primary","type":"related"},{"name":"ciliary motility disorder","type":"exact"},{"name":"immotile ciliary syndrome","type":"exact"}],"termid":"MONDO:0016575","terms_by_termid":{"MONDO:0014909":null},"xrefs":{"Monarch":{"xref_id":"0016575"}}}


id: _global:has_participant
data:
  {"annotation_feature_type":"gene","cv_name":"go/extensions/gorel","definition":"a relation between a process and a continuant, in which the continuant is somehow involved in the process","direct_ancestors":[{"relation_name":"is_a","term_name":"go_annotation_extension_relation","termid":"_global:go_annotation_extension_relation"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_participant","secondary_identifiers":["RO:0000057"],"termid":"_global:has_participant"}


id: PBO:0091709
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ask2 is the name which was given to the spurious ORF on the opposite strand","termid":"PBO:0091709"}


id: PBO:0045021
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DIRAS family GTPase 1","termid":"PBO:0045021"}


id: GO:0021732
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A developmental process, independent of morphogenetic (shape) change, that is required for the midbrain-hindbrain boundary to attain its fully functional state. The midbrain-hindbrain domain of the embryonic brain is comprised of the mesencephalic vesicle and the first rhombencephalic vesicle at early somitogenesis stages. An organizing center at the boundary patterns the midbrain and hindbrain primordia of the neural plate.","definition_xrefs":["GOC:dph","GO_REF:0000021","GOC:cls","GOC:jid","PMID:15541513","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure maturation","termid":"GO:0071695"},{"relation_name":"part_of","term_name":"midbrain-hindbrain boundary development","termid":"GO:0030917"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"midbrain-hindbrain boundary maturation","synonyms":[{"name":"MHB maturation","type":"related"},{"name":"isthmus maturation","type":"related"}],"termid":"GO:0021732"}


id: MONDO:0020801
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, invasive rectal adenocarcinoma characterized by the presence of sheets of malignant epithelial cells with vesicular nuclei, prominent nucleoli, and abundant eosinophilic cytoplasm. It usually has a favorable prognosis.","definition_xrefs":["NCIT:C60640"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rectum adenocarcinoma","termid":"MONDO:0002169"},{"relation_name":"is_a","term_name":"colorectal medullary carcinoma","termid":"MONDO:0020794"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"rectal medullary carcinoma","secondary_identifiers":["MEDGEN:364314","UMLS:C1882915"],"synonyms":[{"name":"rectal medullary carcinoma","type":"exact"}],"termid":"MONDO:0020801","xrefs":{"Monarch":{"xref_id":"0020801"}}}


id: PBO:0069850
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1136, pseudogene","termid":"PBO:0069850"}


id: PBO:0031329
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_chlorpropham","termid":"PBO:0031329"}


id: GO:0043657
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cell within a host organism. Includes the host plasma membrane and any external encapsulating structures such as the host cell wall and cell envelope.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cellular component","termid":"GO:0018995"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell","termid":"GO:0043657"}


id: MONDO:0009904
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Gitelman syndrome (GS), also referred to as familial hypokalemia-hypomagnesemia, is characterized by hypokalemic metabolic alkalosis in combination with significant hypomagnesemia and low urinary calcium excretion.","definition_xrefs":["Orphanet:358"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"renal tubular transport disease","termid":"MONDO:0006510"},{"relation_name":"is_a","term_name":"inherited renal tubular disease","termid":"MONDO:0015962"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"Gitelman syndrome","secondary_identifiers":["DOID:0050450","GARD:8547","NANDO:2100020","OMIM:263800","ICD9:275.49","MEDGEN:75681","MESH:D053579","MedDRA:10062906","NCIT:C84730","SCTID:707756004","UMLS:C0268450","NANDO:2200145"],"synonyms":[{"name":"GTLMNS","type":"related"},{"name":"Gitelman syndrome","type":"exact"},{"name":"Gitelman's syndrome","type":"related"},{"name":"Potassium and magnesium depletion","type":"related"},{"name":"familial hypokalemia-hypomagnesemia","type":"related"},{"name":"hypomagnesemia-hypokalemia, primary renotubular, with hypocalciuria","type":"exact"},{"name":"primary renal tubular hypokalemic hypomagnesemia with hypocalciuria","type":"exact"}],"termid":"MONDO:0009904","xrefs":{"Monarch":{"xref_id":"0009904"}}}


id: PBO:0029282
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_mitotic_spindle_pole_body_during_G2","termid":"PBO:0029282"}


id: FYPO:0009055
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of ethyl methanesulfonate than normal.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0005447","FYPO:0001985","FYPO:0002682","FYPO:0000139"],"is_obsolete":false,"name":"resistance to ethyl methanesulfonate","synonyms":[{"name":"resistance to ethyl methanesulfonate during mitotic cell cycle","type":"related"},{"name":"resistance to ethyl methanesulfonate during vegetative growth","type":"exact"},{"name":"resistant to ethyl methanesulfonate","type":"exact"}],"termid":"FYPO:0009055"}


id: PR:Q9UTN7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug95 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UTN7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 95 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1250.02","synonyms":[{"name":"Spom972h-mug95","type":"exact"}],"termid":"PR:Q9UTN7"}


id: MONDO:0006740
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Empty sella syndrome (ESS) is a condition that involves the sella turcica, a bony structure at the base of the brain that protects the pituitary gland. There is a primary and secondary form of the condition. The primary form occurs when a structural defect above the pituitary gland increases pressure in the sella turcica and causes the gland to flatten. The secondary form occurs when the pituitary gland is damaged due to injury, a tumor, surgery or radiation therapy. Some people with ESS have no symptoms. People with secondary ESS may have symptoms of decreased pituitary function such as absence of menstruation, infertility, fatigue, and intolerance to stress and infection. In children, ESS may be associated with early onset of puberty, growth hormone deficiency, pituitary tumors, or pituitary gland dysfunction. Treatment focuses on the symptoms present in each person.","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"pituitary gland disorder","termid":"MONDO:0003381"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"empty sella syndrome","secondary_identifiers":["EFO:1000914","MESH:D004652","MEDGEN:41766","ICD9:253.8","UMLS:C0014008","DOID:3642","MedDRA:10014567","NCIT:C84686","SCTID:237722004","icd11.foundation:49112094"],"synonyms":[{"name":"empty sella","type":"exact"},{"name":"empty sella syndrome","type":"exact"},{"name":"empty sella turcica","type":"related"}],"termid":"MONDO:0006740","xrefs":{"Monarch":{"xref_id":"0006740"}}}


id: GO:0039678
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Entry of a symbiont's genome into the host cell through the host cell envelope. Occurs in non-enveloped prokaryotic viruses. Caudovirales carry an ejection apparatus that can be long and contractile, long and noncontractile, or short, and is able to penetrate the host cell envelope to deliver the viral genome into the host cell cytoplasm.","definition_xrefs":["GOC:ch","VZ:986","PMID:31663016","PMID:23385786"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral process","termid":"GO:0016032"},{"relation_name":"part_of","term_name":"symbiont entry into host cell","termid":"GO:0046718"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont genome ejection through host cell envelope","synonyms":[{"name":"phage genome ejection","type":"narrow"},{"name":"viral genome ejection through host cell envelope","type":"related"},{"name":"viral genome injection through bacterial membranes","type":"narrow"}],"termid":"GO:0039678"}


id: MONDO:0007230
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Brachymorphism-onychodysplasia-dysphalangism (BOD) is a very rare malformation syndrome that is characterized by short stature, hypoplastic fifth digits with tiny dysplastic nails, facial dysmorphism with coarse features including a wide mouth and broad nose, and mild intellectual disability. It has been suggested that Coffin-Siris syndrome and BOD syndrome are perhaps allelic variants.","definition_xrefs":["Orphanet:1292"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"skeletal system disorder","termid":"MONDO:0005172"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-variable intellectual disability syndrome","termid":"MONDO:0015160"},{"relation_name":"is_a","term_name":"congenital limb malformation","termid":"MONDO:0019054"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Brachymorphism-onychodysplasia-dysphalangism syndrome","secondary_identifiers":["MESH:C536242","OMIM:113477","SCTID:720573009","MEDGEN:350585","UMLS:C1862082","GARD:918"],"synonyms":[{"name":"Brachymorphism onychodysplasia dysphalangism syndrome","type":"related"},{"name":"Brachymorphism-onychodysplasia-dysphalangism syndrome","type":"exact"},{"name":"Senior syndrome","type":"exact"},{"name":"bod syndrome","type":"exact"}],"termid":"MONDO:0007230","xrefs":{"Monarch":{"xref_id":"0007230"}}}


id: MONDO:0007159
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Arthrogryposis-like hand anomaly-sensorineural deafness syndrome is characterized by an arthrogryposis-like hand anomaly and sensorineural deafness. It has been described in only one family. Male-to-male transmission was observed.","definition_xrefs":["Orphanet:1144"],"direct_ancestors":[{"relation_name":"is_a","term_name":"distal arthrogryposis","termid":"MONDO:0019942"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arthrogryposis-like hand anomaly-sensorineural deafness syndrome","secondary_identifiers":["OMIM:108200","GARD:784","MESH:C535386","DOID:0111609","MEDGEN:350677","SCTID:720515009","UMLS:C1862471"],"synonyms":[{"name":"DA6","type":"related"},{"name":"arthrogryposis and sensorineural deafness","type":"related"},{"name":"arthrogryposis, distal, type 6","type":"related"},{"name":"arthrogryposis-like hand anomaly and sensorineural deafness","type":"related"},{"name":"distal arthrogryposis type 6","type":"exact"},{"name":"familial hand abnormality and sensori-neural deafness","type":"related"}],"termid":"MONDO:0007159","xrefs":{"Monarch":{"xref_id":"0007159"}}}


id: GO:0019498
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the conversion of n-octane to octanoyl-CoA.","definition_xrefs":["MetaCyc:P221-PWY"],"direct_ancestors":[{"relation_name":"is_a","term_name":"n-octane metabolic process","termid":"GO:0018939"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"n-octane oxidation","termid":"GO:0019498"}


id: PBO:0046314
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endo-beta-N-acetylglucosaminidase","termid":"PBO:0046314"}


id: PBO:0033820
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"substrate-specific mitotic G1 APC coactivator Srw1/Ste9","termid":"PBO:0033820"}


id: PBO:0049385
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTF3C6 pseudogene 1","termid":"PBO:0049385"}


id: GO:0007221
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The activation of transcription of specific genes as a result of Notch signaling, mediated by the Notch intracellular domain.","definition_xrefs":["PMID:12651094"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of transcription by RNA polymerase II","termid":"GO:0045944"},{"relation_name":"part_of","term_name":"Notch signaling pathway","termid":"GO:0007219"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006351"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0006351"}],"interesting_parent_ids":["GO:0010467","GO:0006351","GO:0008150","GO:0006355","GO:0023052"],"is_obsolete":false,"name":"positive regulation of transcription of Notch receptor target","secondary_identifiers":["Reactome:R-HSA-9013508"],"synonyms":[{"name":"N receptor target transcription factor activation","type":"related"},{"name":"Notch receptor target transcription factor activation","type":"related"}],"termid":"GO:0007221"}


id: GO:0009584
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which a visible light stimulus is received by a cell and converted into a molecular signal. A visible light stimulus is electromagnetic radiation that can be perceived visually by an organism; for organisms lacking a visual system, this can be defined as light with a wavelength within the range 380 to 780 nm.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of light stimulus","termid":"GO:0009583"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of visible light","synonyms":[{"name":"perception of visible light","type":"related"}],"termid":"GO:0009584"}


id: MONDO:0971170
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary neoplastic syndrome","termid":"MONDO:0015356"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prostate cancer, hereditary, X-linked 3","secondary_identifiers":["OMIM:301120","MEDGEN:1861605","UMLS:C5935569"],"termid":"MONDO:0971170","xrefs":{"Monarch":{"xref_id":"0971170"}}}


id: GO:0046787
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of restoring viral DNA after damage or errors in replication.","definition_xrefs":["ISBN:0781718325"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA repair","termid":"GO:0006281"},{"relation_name":"part_of","term_name":"viral process","termid":"GO:0016032"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0006281"}],"interesting_parent_ids":["GO:0006259","GO:0006281","GO:0008150"],"is_obsolete":false,"name":"viral DNA repair","termid":"GO:0046787"}


id: PBO:0028509
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_histone_H3-K9_methylation_at_centromere_outer_repeat","termid":"PBO:0028509"}


id: PBO:0061676
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin 85","termid":"PBO:0061676"}


id: FYPO:0008333
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which ribosome hibernation is normal (i.e. indistinguishable from wild type) during glucose starvation.","definition_xrefs":["PMID:39379376"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process","termid":"FYPO:0000627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal ribosome hibernation during glucose starvation","termid":"FYPO:0008333"}


id: GO:1900588
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving violaceol I.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catechol-containing compound metabolic process","termid":"GO:0009712"},{"relation_name":"is_a","term_name":"ether metabolic process","termid":"GO:0018904"},{"relation_name":"is_a","term_name":"secondary metabolic process","termid":"GO:0019748"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0044281","GO:0019748","GO:0008150"],"is_obsolete":false,"name":"violaceol I metabolic process","synonyms":[{"name":"violaceol I metabolism","type":"exact"}],"termid":"GO:1900588"}


id: FYPO:0004096
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the cytoskeleton is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization","termid":"FYPO:0003627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0000138"],"is_obsolete":false,"name":"normal protein localization to cytoskeleton","synonyms":[{"name":"normal protein localisation to cytoskeleton","type":"exact"}],"termid":"FYPO:0004096"}


id: GO:0009710
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of tropane alkaloids, compounds containing the 8-methyl-8-azabicyclo(3.2.1)octane ring system.","definition_xrefs":["GOC:ai","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alkaloid biosynthetic process","termid":"GO:0009821"},{"relation_name":"is_a","term_name":"tropane alkaloid metabolic process","termid":"GO:0046448"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"tropane alkaloid biosynthetic process","synonyms":[{"name":"tropane alkaloid anabolism","type":"exact"},{"name":"tropane alkaloid biosynthesis","type":"exact"},{"name":"tropane alkaloid formation","type":"exact"},{"name":"tropane alkaloid synthesis","type":"exact"}],"termid":"GO:0009710"}


id: MONDO:1012857
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any pituitary dwarfism that occurs in dogs due to a mutation in the LHX3 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"pituitary dwarfism, dog","termid":"MONDO:1012066"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pituitary dwarfism, LHX3-related, dog","secondary_identifiers":["OMIA:002314-9615"],"synonyms":[{"name":"pituitary hormone deficiency, LHX3-related, dog","type":"related"}],"termid":"MONDO:1012857","xrefs":{"Monarch":{"xref_id":"1012857"}}}


id: GO:0002733
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of myeloid dendritic cell cytokine production.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of dendritic cell cytokine production","termid":"GO:0002730"},{"relation_name":"is_a","term_name":"regulation of myeloid leukocyte mediated immunity","termid":"GO:0002886"},{"relation_name":"regulates","term_name":"myeloid dendritic cell cytokine production","termid":"GO:0002372"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of myeloid dendritic cell cytokine production","termid":"GO:0002733"}


id: PBO:0029049
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-nucleus_mislocalized_to_cell_cortex_during_nitrogen_starvation","termid":"PBO:0029049"}


id: MONDO:0002687
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Superior mesenteric artery syndrome (SMAS) is a digestive condition that occurs when the duodenum (the first part of the small intestine) is compressed between two arteries (the aorta and the superior mesenteric artery). This compression causes partial or complete blockage of the duodenum. Symptoms vary based on severity, but can be severely debilitating. Symptoms may include abdominal pain, fullness, nausea, vomiting, and/or weight loss. SMAS typically is due toloss of the mesenteric fat pad (fatty tissue that surrounds the superior mesenteric artery). The most common cause is significant weight loss caused by medical disorders, psychological disorders, or surgery. In younger patients, it most commonly occurs after corrective spinal surgery for scoliosis. Delays in diagnosis may result in significant complications. Depending on the cause and severity, treatment options may include addressing the underlying cause, dietary changes (small feedings or a liquid diet), and/or surgery. Symptoms may not resolve completely after treatment.","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"duodenal obstruction","termid":"MONDO:0002688"},{"relation_name":"is_a","term_name":"aortic disorder","termid":"MONDO:0005561"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"superior mesenteric artery syndrome","secondary_identifiers":["NCIT:C85175","UMLS:C0038828","Orphanet:622099","SCTID:197006009","MESH:D013478","GARD:7712","DOID:3557","MEDGEN:21404"],"synonyms":[{"name":"Arteriomesenteric duodenal compression syndrome","type":"related"},{"name":"Cast syndrome","type":"related"},{"name":"Wilkie syndrome","type":"related"},{"name":"superior mesenteric artery syndrome","type":"exact"},{"name":"superior mesenteric artery syndromic disease","type":"exact"},{"name":"syndromic disease of superior mesenteric artery","type":"exact"},{"name":"vascular compression of the duodenum","type":"related"}],"termid":"MONDO:0002687","xrefs":{"Monarch":{"xref_id":"0002687"}}}


id: PBO:0050177
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 4","termid":"PBO:0050177"}


id: PBO:0072248
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S20 pseudogene 23","termid":"PBO:0072248"}


id: GO:0052706
data:
  {"annotated_genes":["SJAG_00832"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[103994],"is_not":false,"summary":null,"term":"GO:0052706"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: L-histidine + 3 S-adenosyl-L-methionine <=> 3 H(+) + hercynine + 3 S-adenosyl-L-homocysteine. This reaction is the addition of three methyl groups to L-histidine to form N-alpha,N-alpha,N-alpha-trimethyl-L-histidine (also known as hercynine).","definition_xrefs":["RHEA:38471"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00832":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016741","GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"L-histidine N(alpha)-methyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["KEGG_REACTION:R01169","EC:2.1.1.44","MetaCyc:RXN-14431"],"synonyms":[{"name":"S-adenosyl-L-methionine:L-histidine Nalpha-methyltransferase activity","type":"exact"},{"name":"S-adenosyl-L-methionine:L-histidine alpha-N-methyltransferase activity","type":"exact"},{"name":"histidine N-methyltransferase activity","type":"exact"},{"name":"histidine methyltransferase activity","type":"exact"},{"name":"histidine-alpha-N-methyltransferase activity","type":"exact"}],"termid":"GO:0052706","terms_by_termid":{"GO:0052706":null}}


id: PATO:0002396
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A positional quality inhering in a bearer by virtue of the bearer's being positioned towards the axis of an organism.","definition_xrefs":["PATOC:EH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mislocalised","termid":"PATO:0000628"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mislocalized adaxially","termid":"PATO:0002396"}


id: FYPO:0002367
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which dimethylation of lysine at position 4 of histone H3 occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased histone H3-K4 methylation during vegetative growth","termid":"FYPO:0002366"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0002274"],"is_obsolete":false,"name":"decreased histone H3-K4 dimethylation during vegetative growth","synonyms":[{"name":"decreased histone H3 K4 dimethylation during vegetative growth","type":"exact"},{"name":"decreased histone H3-K4 dimethylation during mitotic cell cycle","type":"related"},{"name":"decreased histone H3K4 dimethylation during vegetative growth","type":"exact"},{"name":"decreased histone H3K4me2 during vegetative growth","type":"exact"},{"name":"decreased histone lysine H3 K4 dimethylation during vegetative growth","type":"exact"},{"name":"reduced histone H3-K4 dimethylation during vegetative growth","type":"exact"}],"termid":"FYPO:0002367"}


id: MONDO:0004038
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Deficiency in the enamel tissue that results in the formation of grooves, pits, or dents on the surface of the affected teeth.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tooth hard tissue disease","termid":"MONDO:0002220"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dental enamel hypoplasia","secondary_identifiers":["DOID:693","EFO:1001304","SCTID:26597004","MESH:D003744","UMLS:C0011351","NCIT:C34529","MEDGEN:3730"],"synonyms":[{"name":"enamel hypoplasia","type":"exact"}],"termid":"MONDO:0004038","xrefs":{"Monarch":{"xref_id":"0004038"}}}


id: PBO:0049054
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 53, pseudogene","termid":"PBO:0049054"}


id: PBO:0114082
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific protein, predicted GPI anchor, possible peptidase","termid":"PBO:0114082"}


id: PR:O74438
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mcp2 gene.","definition_xrefs":["UniProtKB:O74438","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic coiled-coil protein 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1682.08c","synonyms":[{"name":"Spom972h-mcp2","type":"exact"}],"termid":"PR:O74438"}


id: PBO:0061104
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurolysin","termid":"PBO:0061104"}


id: MONDO:0012349
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal recessive spondylocostal dysostosis in which the cause of the disease is a mutation in the LFNG gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive spondylocostal dysostosis","termid":"MONDO:0010180"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0024322"}],"interesting_parent_ids":["MONDO:0005497","MONDO:0006025","MONDO:0024322","MONDO:0005066"],"is_obsolete":false,"name":"spondylocostal dysostosis 3, autosomal recessive","secondary_identifiers":["UMLS:C1853296","MEDGEN:377871","GARD:4973","OMIM:609813","DOID:0112361"],"synonyms":[{"name":"LFNG autosomal recessive spondylocostal dysostosis","type":"exact"},{"name":"SCDO3","type":"related"},{"name":"SCOD3","type":"related"},{"name":"autosomal recessive spondylocostal dysostosis caused by mutation in LFNG","type":"exact"},{"name":"spondylocostal dysostosis 3","type":"related"},{"name":"spondylocostal dysostosis 3, autosomal recessive","type":"exact"}],"termid":"MONDO:0012349","xrefs":{"Monarch":{"xref_id":"0012349"}}}


id: PBO:0046010
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 1 pseudogene 5","termid":"PBO:0046010"}


id: MONDO:0001405
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Dermatophytosis involving the stratum corneum of the skin of the groin and perianal area.","definition_xrefs":["NCIT:C34535"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dermatophytosis","termid":"MONDO:0004678"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"dermatophytosis of groin and perianal area","secondary_identifiers":["UMLS:C0011638","MEDGEN:3769","DOID:11917","ICD9:110.3","SCTID:399029005"],"synonyms":[{"name":"Dhobie itch","type":"exact"},{"name":"dermatophytosis of groin & perianal area","type":"exact"},{"name":"dermatophytosis of groin and perianal area","type":"exact"},{"name":"tinea cruris","type":"related"}],"termid":"MONDO:0001405","xrefs":{"Monarch":{"xref_id":"0001405"}}}


id: GO:0102158
data:
  {"annotated_genes":["SJAG_01300"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[61543],"is_not":false,"summary":null,"term":"GO:0102158"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a very-long-chain (3R)-3-hydroxyacyl-CoA = H2O + a very-long-chain (2E)-enoyl-CoA. This reaction is the third (dehydration) step of the four-step fatty acid elongation cycle in the endoplasmic reticulum that extends fatty acids of C-16 or longer with an additional 2-C unit.","definition_xrefs":["RHEA:45812","PMID:19763486","PMID:16564093"],"direct_ancestors":[{"relation_name":"is_a","term_name":"3-hydroxyacyl-CoA dehydratase activity","termid":"GO:0018812"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01300":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"very-long-chain (3R)-3-hydroxyacyl-CoA dehydratase activity","references_by_uniquename":{"GO_REF:0000003":null},"secondary_identifiers":["MetaCyc:RXN-11750","EC:4.2.1.134"],"synonyms":[{"name":"very-long-chain 3-hydroxyacyl-CoA dehydratase activity","type":"exact"}],"termid":"GO:0102158","terms_by_termid":{"GO:0102158":null}}


id: GO:0042795
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The synthesis of small nuclear RNA (snRNA) from a DNA template by RNA Polymerase II (Pol II), originating at a Pol II promoter.","definition_xrefs":["GOC:jl","ISBN:0321000382"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription by RNA polymerase II","termid":"GO:0006366"},{"relation_name":"is_a","term_name":"snRNA transcription","termid":"GO:0009301"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0016073"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006351","GO:0016073","GO:0010467"],"is_obsolete":false,"name":"snRNA transcription by RNA polymerase II","secondary_identifiers":["Reactome:R-HSA-6807505"],"synonyms":[{"name":"snRNA transcription from Pol II promoter","type":"exact"},{"name":"snRNA transcription from RNA polymerase II promoter","type":"exact"}],"termid":"GO:0042795"}


id: PBO:0085409
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Plasma membrane receptor for plant antifungal osmotin; involved in zinc ion homeostasis, apoptosis; negatively regulates ZRT1 and other functionally divergent genes through CCCTC promoter motif (IzRE); modulates FET3 activity in iron-independent manner; affects gene expression by influencing balance of competition between Msn2p/Msn4p and Nrg1p/Nrg2p for binding to IzRE; transcription regulated by Zap1p, zinc, fatty acid levels; homolog of mammalian adiponectin receptor","termid":"PBO:0085409"}


id: FYPO:0000459
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which cohesion between centromeres of sister chromatids is abnormal during mitosis.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic sister chromatid cohesion","termid":"FYPO:0006521"},{"relation_name":"part_of","term_name":"abnormal mitotic sister chromatid segregation","termid":"FYPO:0000141"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0000641"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000337","FYPO:0000641","FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0000631"],"is_obsolete":false,"name":"abnormal mitotic centromeric sister chromatid cohesion","synonyms":[{"name":"abnormal centromeric sister chromatid cohesion during mitotic cell cycle","type":"related"},{"name":"abnormal centromeric sister chromatid cohesion during vegetative growth","type":"exact"},{"name":"abnormal mitotic sister chromatid cohesion at centromere","type":"exact"},{"name":"abnormal mitotic sister chromatid cohesion, centromeric","type":"exact"},{"name":"abnormal sister chromatid cohesion at centromere during mitosis","type":"exact"}],"termid":"FYPO:0000459"}


id: PBO:0003273
data:
  {"annotation_feature_type":"gene","cv_name":"cat_act","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trifunctional enzyme","termid":"PBO:0003273"}


id: MONDO:0015353
data:
  {"annotated_genes":["SJAG_01352"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85690],"is_not":false,"summary":null,"term":"MONDO:0015353"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"neuronopathy, distal hereditary motor, type 5","termid":"MONDO:0100350"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01352":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0005559","MONDO:0005244"],"is_obsolete":false,"name":"neuronopathy, distal hereditary motor, type 5A","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0111204","OMIM:600794","GARD:18266"],"synonyms":[{"name":"HMN 5A","type":"exact"},{"name":"HMN5A","type":"exact"},{"name":"dHMN 5A","type":"exact"},{"name":"dHMN5","type":"broad"},{"name":"distal HMN V","type":"broad"},{"name":"distal hereditary motor neuropathy type V","type":"broad"},{"name":"distal spinal muscular atrophy type 5","type":"broad"},{"name":"neuronopathy, distal hereditary motor, type 5","type":"broad"},{"name":"neuronopathy, distal hereditary motor, type 5A","type":"exact"},{"name":"neuronopathy, distal hereditary motor, type VA","type":"exact"},{"name":"neuropathy, distal hereditary motor, type 5A","type":"exact"},{"name":"spinal muscular atrophy, distal, type 5","type":"broad"},{"name":"spinal muscular atrophy, distal, type 5A","type":"exact"},{"name":"spinal muscular atrophy, distal, with upper limb predominance","type":"exact"}],"termid":"MONDO:0015353","terms_by_termid":{"MONDO:0015353":null},"xrefs":{"Monarch":{"xref_id":"0015353"}}}


id: FYPO:0002506
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the palmitoylation of one or more specific proteins is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein modification during vegetative growth","termid":"FYPO:0000329"},{"relation_name":"is_a","term_name":"abnormal protein palmitoylation","termid":"FYPO:0002503"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0002274","FYPO:0001320"],"is_obsolete":false,"name":"abnormal protein palmitoylation during vegetative growth","synonyms":[{"name":"abnormal protein palmitoylation during mitotic cell cycle","type":"related"}],"termid":"FYPO:0002506"}


id: PBO:0053781
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1031","termid":"PBO:0053781"}


id: PBO:0068307
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 11","termid":"PBO:0068307"}


id: PBO:0113552
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oligosaccharyltransferase complex alpha subunit, Ost1","termid":"PBO:0113552"}


id: FYPO:0007701
data:
  {"alleles_by_uniquename":{"SJAG_04332:allele-1":{"allele_type":"amino_acid_mutation","description":"I30T,T572P","gene_uniquename":"SJAG_04332","name":"cdc25-D9","uniquename":"SJAG_04332:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[119568],"is_not":false,"summary":null,"term":"FYPO:0007701"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a cell is inviable, is longer than normal, has one nucleus, and the mitotic cell cycle is arrested with nuclei at the mitotic G2/M phase transition.","definition_xrefs":["PMID:33683349","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable elongated mononucleate vegetative cell","termid":"FYPO:0004255"},{"relation_name":"is_a","term_name":"inviable elongated cell with cell cycle arrest at mitotic G2/M phase transition","termid":"FYPO:0007702"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04332":null},"genotype_count":1,"genotypes_by_uniquename":{"cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cdc25-D9(I30T,T572P aa)","display_uniquename":"cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04332:allele-1","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000004"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0000005","FYPO:0001320","FYPO:0000631","FYPO:0005447","FYPO:0000004"],"is_obsolete":false,"name":"inviable elongated mononucleate cell with cell cycle arrest at mitotic G2/M phase transition","references_by_uniquename":{"PMID:25866389":null},"single_locus_annotated_genes":["SJAG_04332"],"single_locus_genotype_uniquenames":["cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"inviable elongated mononucleate cell with cell cycle arrest at mitotic G2/M phase transition during mitotic cell cycle","type":"related"},{"name":"inviable elongated mononucleate cell with cell cycle arrest at mitotic G2/M phase transition during vegetative growth","type":"exact"},{"name":"inviable elongated mononucleate cell with cell cycle arrest in mitotic G2 phase","type":"related"},{"name":"inviable elongated mononucleate vegetative cell with cell cycle arrest at mitotic G2/M phase transition","type":"exact"},{"name":"lethal; elongated mononucleate cell with cell cycle arrest at mitotic G2/M phase transition","type":"exact"}],"termid":"FYPO:0007701","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000137":null,"FYPO:0007701":null,"FYPO_EXT:0000001":null}}


id: PBO:0089755
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucose-6-phosphate 1-dehydrogenase","termid":"PBO:0089755"}


id: GO:1990556
data:
  {"annotated_genes":["SJAG_00671"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88771],"is_not":false,"summary":null,"term":"GO:1990556"}]},"cv_name":"biological_process","definition":"The process in which 2-isopropylmalate(2-) is transported across a mitochondrial membrane, into or out of the mitochondrion.","definition_xrefs":["PMID:10428783"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-isopropylmalate(2-) transmembrane transport","termid":"GO:1902357"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00671":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0055085","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"mitochondrial isopropylmalate transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1990556","terms_by_termid":{"GO:1990556":null}}


id: GO:0098838
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a folic acid, or one of its derivatives (dihydrofolate, tetrahydrofolate, methylene-tetrahydrofolate or methyl-tetrahydrofolate) is transported across a membrane.","definition_xrefs":["PMID:24745983"],"direct_ancestors":[{"relation_name":"is_a","term_name":"folic acid transport","termid":"GO:0015884"},{"relation_name":"is_a","term_name":"vitamin transmembrane transport","termid":"GO:0035461"},{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transport","termid":"GO:1905039"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0055085","GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"folate transmembrane transport","synonyms":[{"name":"folic acid transmembrane transport","type":"related"},{"name":"reduced folate transmembrane transport","type":"narrow"}],"termid":"GO:0098838"}


id: SO:0000433
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A polymeric tract, such as poly(dA), within a non_LTR_retrotransposon.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"repeat_region","termid":"SO:0000657"},{"relation_name":"is_a","term_name":"repeat_component","termid":"SO:0000840"},{"relation_name":"part_of","term_name":"non_LTR_retrotransposon","termid":"SO:0000189"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non_LTR_retrotransposon_polymeric_tract","synonyms":[{"name":"INSDC_feature:repeat_region","type":"broad"},{"name":"INSDC_qualifier:non_ltr_retrotransposon_polymeric_tract","type":"exact"},{"name":"non LTR retrotransposon polymeric tract","type":"exact"}],"termid":"SO:0000433"}


id: PBO:0063683
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piggyBac transposable element derived 4 pseudogene 7","termid":"PBO:0063683"}


id: PBO:0017021
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"box H/ACA small nucleolar RNA 20/snR35","termid":"PBO:0017021"}


id: GO:0051318
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell cycle 'gap' phase which is the interval between the completion of DNA segregation (usually by mitosis or meiosis) and the beginning of DNA synthesis.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle phase","termid":"GO:0022403"},{"relation_name":"part_of","term_name":"interphase","termid":"GO:0051325"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"G1 phase","secondary_identifiers":["Wikipedia:G1_phase"],"termid":"GO:0051318"}


id: PBO:0040757
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"B double prime 1 pseudogene","termid":"PBO:0040757"}


id: PBO:0090911
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane NiCoT heavy metal ion transmembrane transporter Nic1","termid":"PBO:0090911"}


id: MOD:01545
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces the O4'-hydrogen atom of a tyrosine residue with the Applied Biosystems iTRAQ8plex-115 reporter+balance group.","definition_xrefs":["Unimod:731#Y"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-tyrosine residue","termid":"MOD:00919"},{"relation_name":"is_a","term_name":"iTRAQ8plex-115 reporter+balance reagent acylated residue","termid":"MOD:01542"},{"relation_name":"is_a","term_name":"iTRAQ8plex reporter+balance reagent O-acylated residue","termid":"MOD:01714"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iTRAQ8plex-115 reporter+balance reagent O4'-acylated tyrosine","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"},{"name":"Accurate mass for 115, 118, 119 & 121","type":"related"},{"name":"Applied Biosystems iTRAQ(TM) multiplexed quantitation chemistry","type":"related"},{"name":"iTRAQ8plex:13C(6)15N(2)","type":"related"}],"termid":"MOD:01545"}


id: PBO:0005616
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"D-amino acid oxidase (predicted)","termid":"PBO:0005616"}


id: PBO:0090431
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lsd1/2 complex PHD finger protein Phf2","termid":"PBO:0090431"}


id: GO:0050211
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-galactose + procollagen 5-hydroxy-L-lysine = UDP + procollagen 5-(D-galactosyloxy)-L-lysine.","definition_xrefs":["MetaCyc:PROCOLLAGEN-GALACTOSYLTRANSFERASE-RXN","EC:2.4.1.50"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-galactosyltransferase activity","termid":"GO:0035250"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0140096","GO:0016757"],"is_obsolete":false,"name":"procollagen galactosyltransferase activity","secondary_identifiers":["Reactome:R-HSA-1981128","Reactome:R-HSA-1981120","RHEA:12637"],"synonyms":[{"name":"UDP galactose-collagen galactosyltransferase activity","type":"related"},{"name":"UDP-galactose:procollagen-5-hydroxy-L-lysine D-galactosyltransferase activity","type":"related"},{"name":"UDPgalactose:5-hydroxylysine-collagen galactosyltransferase activity","type":"related"},{"name":"UDPgalactose:procollagen-5-hydroxy-L-lysine D-galactosyltransferase activity","type":"related"},{"name":"collagen galactosyltransferase activity","type":"related"},{"name":"collagen hydroxylysyl galactosyltransferase activity","type":"related"},{"name":"hydroxylysine galactosyltransferase activity","type":"related"},{"name":"uridine diphosphogalactose-collagen galactosyltransferase activity","type":"related"}],"termid":"GO:0050211"}


id: GO:0097014
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"All of the contents of a cilium, excluding the plasma membrane surrounding the cilium.","definition_xrefs":["GOC:cilia","GOC:BHF","PMID:17895364","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane bounded cell projection cytoplasm","termid":"GO:0032838"},{"relation_name":"part_of","term_name":"cilium","termid":"GO:0005929"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"ciliary plasm","synonyms":[{"name":"cilial cytoplasm","type":"related"},{"name":"ciliary cytoplasm","type":"related"},{"name":"cilium cytoplasm","type":"related"},{"name":"cilium plasm","type":"exact"},{"name":"microtubule-based flagellar cytoplasm","type":"related"},{"name":"microtubule-based flagellar matrix","type":"narrow"},{"name":"microtubule-based flagellum cytoplasm","type":"related"},{"name":"microtubule-based flagellum matrix","type":"narrow"}],"termid":"GO:0097014"}


id: FYPO:0004023
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which one or more proteins is localized to the mitotic spindle for a longer time than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to mitotic spindle","termid":"FYPO:0002824"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0000138","FYPO:0005447"],"is_obsolete":false,"name":"increased duration of protein localization to mitotic spindle","synonyms":[{"name":"increased duration of protein localisation to mitotic spindle","type":"exact"},{"name":"increased duration of protein localization to mitotic spindle during mitotic cell cycle","type":"related"},{"name":"increased duration of protein localization to spindle during vegetative growth","type":"exact"},{"name":"prolonged protein localization to mitotic spindle","type":"exact"}],"termid":"FYPO:0004023"}


id: PBO:0017914
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae YPD1","termid":"PBO:0017914"}


id: MONDO:1010294
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Rheumatoid arthritis that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"connective tissue disorder, non-human animal","termid":"MONDO:1011309"},{"relation_name":"is_a","term_name":"inflammatory disease, non-human animal","termid":"MONDO:1011327"},{"relation_name":"is_a","term_name":"musculoskeletal system disorder, non-human animal","termid":"MONDO:1011335"},{"relation_name":"is_a","term_name":"autoimmune disease, non-human animal","termid":"MONDO:1012985"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rheumatoid arthritis, non-human animal","secondary_identifiers":["OMIA:000067"],"termid":"MONDO:1010294","xrefs":{"Monarch":{"xref_id":"1010294"}}}


id: PBO:0069186
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 440, pseudogene","termid":"PBO:0069186"}


id: MONDO:1010665
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Evans syndrome that occurs in horse.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Evans syndrome, non-human animal","termid":"MONDO:1010082"},{"relation_name":"is_a","term_name":"thrombocytopenia, horse","termid":"MONDO:1010661"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Evans syndrome, horse","secondary_identifiers":["OMIA:001286-9796"],"termid":"MONDO:1010665","xrefs":{"Monarch":{"xref_id":"1010665"}}}


id: PBO:0117058
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NEK11 antisense RNA 1","termid":"PBO:0117058"}


id: GO:0046446
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving purine alkaloids, compounds derived from purine and composed of an N-containing double ring structure.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alkaloid metabolic process","termid":"GO:0009820"},{"relation_name":"is_a","term_name":"purine-containing compound metabolic process","termid":"GO:0072521"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"purine alkaloid metabolic process","synonyms":[{"name":"purine alkaloid metabolism","type":"exact"}],"termid":"GO:0046446"}


id: SO:0000181
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A match against a translated sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide_match","termid":"SO:0000347"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translated_nucleotide_match","synonyms":[{"name":"translated nucleotide match","type":"exact"}],"termid":"SO:0000181"}


id: GO:1903936
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a sodium arsenite stimulus.","definition_xrefs":["GO_REF:0000071","GOC:TermGenie","PMID:18674524"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to arsenic-containing substance","termid":"GO:0071243"},{"relation_name":"is_a","term_name":"cellular response to salt","termid":"GO:1902075"},{"relation_name":"is_a","term_name":"response to sodium arsenite","termid":"GO:1903935"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to sodium arsenite","termid":"GO:1903936"}


id: PBO:0074062
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 39","termid":"PBO:0074062"}


id: GO:0140948
data:
  {"annotated_genes":["SJAG_04574"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[110874],"is_not":false,"summary":null,"term":"GO:0140948"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: L-lysyl9-[histone H3] + S-adenosyl-L-methionine = H+ + N6-methyl-L-lysyl9-[histone H3] + S-adenosyl-L-homocysteine. This reaction is the addition of a methyl group to the unmethylated lysine residue at position 9 of histone H3, producing histone H3K9me.","definition_xrefs":["RHEA:60288"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H3K9 methyltransferase activity","termid":"GO:0046974"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04574":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0008276"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0008276","GO:0016741","GO:0140096","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"histone H3K9 monomethyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:2.1.1.367"],"synonyms":[{"name":"histone H3-K9 methylation","type":"broad"},{"name":"histone H3K9 methylation","type":"broad"},{"name":"histone H3K9 monomethylase activity","type":"exact"},{"name":"histone lysine N-monomethyltransferase activity (H3-K9 specific)","type":"exact"}],"termid":"GO:0140948","terms_by_termid":{"GO:0140948":null}}


id: PBO:0089518
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein heavy chain, minus-end directed microtubule motor Dhc1","termid":"PBO:0089518"}


id: GO:0046341
data:
  {"annotated_genes":["SJAG_00168","SJAG_01233","SJAG_00426","SJAG_03563"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[80437,113400,119920,115059],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016024"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving CDP-diacylglycerol, CDP-1,2-diacylglycerol, a substance composed of diacylglycerol in glycosidic linkage with cytidine diphosphate. It is a common intermediate in phospholipid biosynthesis.","definition_xrefs":["PMID:24533860"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycerophospholipid metabolic process","termid":"GO:0006650"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00168":null,"SJAG_00426":null,"SJAG_01233":null,"SJAG_03563":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"CDP-diacylglycerol metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:25318672":null},"synonyms":[{"name":"CDP-diacylglycerol metabolism","type":"exact"}],"termid":"GO:0046341","terms_by_termid":{"GO:0016024":null}}


id: GO:0098648
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A specialised collagen fibril that functions as an anchor, binding to other collagen structures.","definition_xrefs":["PMID:19945621","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"complex of collagen trimers","termid":"GO:0098644"},{"relation_name":"part_of","term_name":"basement membrane/interstitial matrix interface","termid":"GO:0140086"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"collagen anchoring fibril","termid":"GO:0098648"}


id: PBO:0026939
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-delayed_onset_of_meiosis_I","termid":"PBO:0026939"}


id: PR:O74921
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC757.11c gene.","definition_xrefs":["UniProtKB:O74921","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized MFS-type transporter C757.11c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC757.11c","synonyms":[{"name":"Spom972h-SPCC757.11c","type":"exact"}],"termid":"PR:O74921"}


id: MONDO:0013772
data:
  {"annotated_genes":["SJAG_04325"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87028],"is_not":false,"summary":null,"term":"MONDO:0013772"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04325":null},"genotype_count":0,"is_obsolete":false,"name":"Huppke-Brendel syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:614482","GARD:17365","Orphanet:300313","UMLS:C4751114","MEDGEN:1659966"],"synonyms":[{"name":"CCHLND","type":"related"},{"name":"Huppke-Brendel syndrome","type":"exact"},{"name":"acetyl CoA transporter deficiency","type":"exact"},{"name":"congenital cataract-deafness-severe developmental delay syndrome","type":"exact"},{"name":"congenital cataracts, hearing loss, and neurodegeneration","type":"exact"},{"name":"lethal neurodegenerative disorder due to copper transport defect","type":"exact"}],"termid":"MONDO:0013772","terms_by_termid":{"MONDO:0013772":null},"xrefs":{"Monarch":{"xref_id":"0013772"}}}


id: GO:0016581
data:
  {"annotated_genes":["SJAG_03982","SJAG_02778","SJAG_03844","SJAG_00934"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[72042,108533,112488,113672],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070824"}]},"cv_name":"cellular_component","definition":"An approximately 2 MDa multi-subunit complex that exhibits ATP-dependent chromatin remodeling activity in addition to histone deacetylase (HDAC) activity, and has been shown to establish transcriptional repression of a number of target genes in vertebrates, invertebrates and fungi. Amongst its subunits, the NuRD complex contains histone deacetylases, histone binding proteins and Mi-2-like proteins.","definition_xrefs":["PMID:10589671","PMID:17289569","PMID:11743021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone deacetylase complex","termid":"GO:0000118"},{"relation_name":"is_a","term_name":"transcription regulator complex","termid":"GO:0005667"},{"relation_name":"is_a","term_name":"CHD-type complex","termid":"GO:0090545"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00934":null,"SJAG_02778":null,"SJAG_03844":null,"SJAG_03982":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005654"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"part_of","termid":"GO:0005694"}],"interesting_parent_ids":["GO:0005575","GO:0005694","GO:0032991","GO:0005654","GO:0005634"],"is_obsolete":false,"name":"NuRD complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"Mi-2 complex","type":"narrow"},{"name":"NRD complex","type":"exact"},{"name":"nucleosome remodeling and histone deacetylation complex","type":"exact"}],"termid":"GO:0016581","terms_by_termid":{"GO:0070824":null}}


id: FYPO:0005355
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which site-specific DNA replication termination at RTS1 barrier in the mating type region is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal DNA replication","termid":"FYPO:0000217"},{"relation_name":"is_a","term_name":"abnormal genetic imprinting at mating-type locus","termid":"FYPO:0003079"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0000293"],"is_obsolete":false,"name":"abnormal site-specific DNA replication termination at RTS1 barrier","synonyms":[{"name":"abnormal site-specific DNA replication termination at RTS1 barrier during mitotic cell cycle","type":"related"},{"name":"abnormal site-specific DNA replication termination at RTS1 barrier during vegetative growth","type":"exact"}],"termid":"FYPO:0005355"}


id: PBO:0045529
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deltex E3 ubiquitin ligase 2","termid":"PBO:0045529"}


id: FYPO:0002844
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cell population phenotype in which a cell undergoes one or a few rounds of cell division before cells die, resulting in the formation a colony that contains only a few inviable cells which are septated, elongated, and have a larger than normal cell volume. Up to 6 rounds of cell division (generating 64 cells) may be observed, but 3 divisions or fewer is more typical.","definition_xrefs":["PomBase:vw","PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete inviable microcolony, swollen elongated septated cells (obsolete FYPO:0002844)","synonyms":[{"name":"inviable microcolony, enlarged long septated vegetative cells","type":"related"},{"name":"inviable microcolony, large elongated septated vegetative cells","type":"related"},{"name":"inviable microcolony, swollen elongated septated vegetative cells","type":"exact"}],"termid":"FYPO:0002844"}


id: GO:1902642
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate catabolic process.","definition_xrefs":["GOC:TermGenie","PMID:22562153","GO_REF:0000058","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of lipid catabolic process","termid":"GO:0050995"},{"relation_name":"is_a","term_name":"regulation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate catabolic process","termid":"GO:1902641"},{"relation_name":"is_a","term_name":"negative regulation of phospholipid metabolic process","termid":"GO:1903726"},{"relation_name":"negatively_regulates","term_name":"1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate catabolic process","termid":"GO:1902634"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"negative regulation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate catabolic process","synonyms":[{"name":"down regulation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate breakdown","type":"exact"},{"name":"down regulation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate catabolic process","type":"exact"},{"name":"down regulation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate catabolism","type":"exact"},{"name":"down regulation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate degradation","type":"exact"},{"name":"down-regulation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate breakdown","type":"exact"},{"name":"down-regulation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate catabolic process","type":"exact"},{"name":"down-regulation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate catabolism","type":"exact"},{"name":"down-regulation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate degradation","type":"exact"},{"name":"downregulation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate breakdown","type":"exact"},{"name":"downregulation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate catabolic process","type":"exact"},{"name":"downregulation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate catabolism","type":"exact"},{"name":"downregulation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate degradation","type":"exact"},{"name":"inhibition of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate breakdown","type":"narrow"},{"name":"inhibition of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate catabolic process","type":"narrow"},{"name":"inhibition of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate catabolism","type":"narrow"},{"name":"inhibition of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate degradation","type":"narrow"},{"name":"negative regulation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate breakdown","type":"exact"},{"name":"negative regulation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate catabolism","type":"exact"},{"name":"negative regulation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate degradation","type":"exact"}],"termid":"GO:1902642"}


id: PBO:0088723
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER protein folding protein","termid":"PBO:0088723"}


id: GO:0038160
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by the binding of the C-X-C chemokine CXCL12 to a C-X-C chemokine type 4 receptor (CXCR4) on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:nhn"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemokine (C-X-C motif) ligand 12 signaling pathway","termid":"GO:0038146"},{"relation_name":"is_a","term_name":"C-X-C chemokine receptor CXCR4 signaling pathway","termid":"GO:0038159"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"CXCL12-activated CXCR4 signaling pathway","synonyms":[{"name":"CXCL12-activated CXCR4 signalling pathway","type":"exact"}],"termid":"GO:0038160"}


id: PBO:0054627
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2032","termid":"PBO:0054627"}


id: PBO:0000689
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEven Binding","termid":"PBO:0000689"}


id: MONDO:0000204
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete skin creases, congenital symmetric circumferential (obsolete MONDO:0000204)","secondary_identifiers":["OMIMPS:156610"],"termid":"MONDO:0000204","xrefs":{"Monarch":{"xref_id":"0000204"}}}


id: MONDO:0026180
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete genetic congenital limb malformation (obsolete MONDO:0026180)","secondary_identifiers":["Orphanet:183536"],"termid":"MONDO:0026180","xrefs":{"Monarch":{"xref_id":"0026180"}}}


id: PBO:0073749
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC2A4 regulator","termid":"PBO:0073749"}


id: GO:0052223
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a motile cell or organism towards a lower concentration of a specific chemical on, within or near a second organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete negative chemotaxis in environment of other organism involved in symbiotic interaction (obsolete GO:0052223)","synonyms":[{"name":"negative chemotaxis in environment of other organism during symbiotic interaction","type":"related"},{"name":"negative chemotaxis in response to environment of other organism","type":"exact"}],"termid":"GO:0052223"}


id: GO:1902233
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of positive thymic T cell selection.","definition_xrefs":["GOC:TermGenie","PMID:22080863"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of T cell differentiation in thymus","termid":"GO:0033085"},{"relation_name":"is_a","term_name":"regulation of positive thymic T cell selection","termid":"GO:1902232"},{"relation_name":"negatively_regulates","term_name":"positive thymic T cell selection","termid":"GO:0045059"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"negatively_regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"negative regulation of positive thymic T cell selection","synonyms":[{"name":"down regulation of positive thymic T cell selection","type":"exact"},{"name":"down regulation of positive thymic T lymphocyte selection","type":"exact"},{"name":"down regulation of positive thymic T-cell selection","type":"exact"},{"name":"down regulation of positive thymic T-lymphocyte selection","type":"exact"},{"name":"down-regulation of positive thymic T cell selection","type":"exact"},{"name":"down-regulation of positive thymic T lymphocyte selection","type":"exact"},{"name":"down-regulation of positive thymic T-cell selection","type":"exact"},{"name":"down-regulation of positive thymic T-lymphocyte selection","type":"exact"},{"name":"downregulation of positive thymic T cell selection","type":"exact"},{"name":"downregulation of positive thymic T lymphocyte selection","type":"exact"},{"name":"downregulation of positive thymic T-cell selection","type":"exact"},{"name":"downregulation of positive thymic T-lymphocyte selection","type":"exact"},{"name":"inhibition of positive thymic T cell selection","type":"narrow"},{"name":"inhibition of positive thymic T lymphocyte selection","type":"narrow"},{"name":"inhibition of positive thymic T-cell selection","type":"narrow"},{"name":"inhibition of positive thymic T-lymphocyte selection","type":"narrow"},{"name":"negative regulation of positive thymic T lymphocyte selection","type":"exact"},{"name":"negative regulation of positive thymic T-cell selection","type":"exact"},{"name":"negative regulation of positive thymic T-lymphocyte selection","type":"exact"}],"termid":"GO:1902233"}


id: FYPO:0006904
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle checkpoint phenotype in which a mitotic cell size control checkpoint is normal (i.e. indistinguishable from wild type). A mitotic cell size control checkpoint normally prevents cell cycle progression until the cell reaches a certain size.","definition_xrefs":["GO:0031567","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal mitotic cell cycle checkpoint","termid":"FYPO:0001703"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0000631","FYPO:0001312","FYPO:0001320","FYPO:0000298"],"is_obsolete":false,"name":"normal mitotic cell size control checkpoint","synonyms":[{"name":"normal cell size control checkpoint during mitotic cell cycle","type":"exact"},{"name":"normal mitotic cell size control checkpoint activation","type":"exact"},{"name":"normal mitotic cell size control checkpoint during vegetative growth","type":"exact"}],"termid":"FYPO:0006904"}


id: GO:1901961
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of isobutanol.","definition_xrefs":["PMID:22224870","GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary alcohol biosynthetic process","termid":"GO:0034309"},{"relation_name":"is_a","term_name":"isobutanol metabolic process","termid":"GO:1901960"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"isobutanol biosynthetic process","synonyms":[{"name":"isobutanol anabolism","type":"exact"},{"name":"isobutanol biosynthesis","type":"exact"},{"name":"isobutanol formation","type":"exact"},{"name":"isobutanol synthesis","type":"exact"}],"termid":"GO:1901961"}


id: FYECO:0000346
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Any set of experimental conditions that places all cells in a culture into the same growth stage (e.g. cell cycle phase).","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping experimental environment","termid":"FYECO:0000132"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synchronous culture","termid":"FYECO:0000346"}


id: PBO:0060628
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NCKAP5 antisense RNA 2","termid":"PBO:0060628"}


id: FYECO:0000234
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which sulfite was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ sulfite","termid":"FYECO:0000234"}


id: PBO:0083885
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ferrochelatase; a mitochondrial inner membrane protein, catalyzes insertion of ferrous iron into protoporphyrin IX, the eighth and final step in the heme biosynthetic pathway; human homolog FECH can complement yeast mutant and allow growth of haploid null after sporulation of a heterozygous diploid","termid":"PBO:0083885"}


id: PBO:0075869
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SSX family pseudogene 9","termid":"PBO:0075869"}


id: PR:000030002
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A serine/threonine-protein kinase Chk2 that is encoded in the genome of Schizosaccharomyces pombe.","definition_xrefs":["PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine-protein kinase cds1 (Schizosaccharomyces pombe)","pombase_gene_id":"SPCC18B5.11c","synonyms":[{"name":"Spom-CHEK2","type":"exact"}],"termid":"PR:000030002"}


id: PBO:0067376
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 478, pseudogene","termid":"PBO:0067376"}


id: GO:1902020
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cilium-dependent cell motility.","definition_xrefs":["GOC:TermGenie","GOC:jl","GOC:cilia"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cilium-dependent cell motility","termid":"GO:1902019"},{"relation_name":"is_a","term_name":"negative regulation of cell motility","termid":"GO:2000146"},{"relation_name":"negatively_regulates","term_name":"cilium-dependent cell motility","termid":"GO:0060285"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cilium-dependent cell motility","synonyms":[{"name":"down regulation of ciliary cell motility","type":"exact"},{"name":"down-regulation of ciliary cell motility","type":"exact"},{"name":"downregulation of ciliary cell motility","type":"exact"},{"name":"inhibition of ciliary cell motility","type":"narrow"},{"name":"negative regulation of ciliary cell motility","type":"related"},{"name":"negative regulation of cilium cell motility","type":"exact"}],"termid":"GO:1902020"}


id: PBO:0088542
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNARE Sec22","termid":"PBO:0088542"}


id: MONDO:0029134
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"disease","termid":"MONDO:0000001"},{"relation_name":"excluded_subClassOf","term_name":"lymphoproliferative syndrome","termid":"MONDO:0016537"},{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"severe combined immunodeficiency","termid":"MONDO:0015974"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005046"],"is_obsolete":false,"name":"severe combined immunodeficiency due to CARMIL2 deficiency","secondary_identifiers":["MEDGEN:1648422","DOID:0111984","UMLS:C4748304","Orphanet:542301","OMIM:618131","GARD:17981"],"synonyms":[{"name":"IMD58","type":"related"},{"name":"immunodeficiency 58","type":"exact"}],"termid":"MONDO:0029134","xrefs":{"Monarch":{"xref_id":"0029134"}}}


id: PBO:0001642
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alternative splicing possible. Evidence of transcript missing final intron","termid":"PBO:0001642"}


id: PBO:0111805
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycogen synthase kinase 3 (GSK-3) subfamily","termid":"PBO:0111805"}


id: GO:0046009
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the receptiveness of a female to male advances subsequent to mating.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of female receptivity","termid":"GO:0045925"},{"relation_name":"is_a","term_name":"regulation of female receptivity, post-mating","termid":"GO:0046008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of female receptivity, post-mating","synonyms":[{"name":"activation of female receptivity, post-mating","type":"narrow"},{"name":"stimulation of female receptivity, post-mating","type":"narrow"},{"name":"up regulation of female receptivity, post-mating","type":"exact"},{"name":"up-regulation of female receptivity, post-mating","type":"exact"},{"name":"upregulation of female receptivity, post-mating","type":"exact"}],"termid":"GO:0046009"}


id: PBO:0049612
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H3 histone pseudogene 15","termid":"PBO:0049612"}


id: GO:0099190
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of spectrin-associated cytoskeleton and associated proteins in the postsynapse.","definition_xrefs":["PMID:28576936","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"postsynaptic cytoskeleton organization","termid":"GO:0099188"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0008150","GO:0007010"],"is_obsolete":false,"name":"postsynaptic spectrin-associated cytoskeleton organization","termid":"GO:0099190"}


id: PBO:0045635
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox 4 like 47 (pseudogene)","termid":"PBO:0045635"}


id: MONDO:1011605
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Type 2 diabetes mellitus that occurs in pig.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diabetes mellitus, pig","termid":"MONDO:1010577"},{"relation_name":"is_a","term_name":"type 2 diabetes mellitus, non-human animal","termid":"MONDO:1011402"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"type 2 diabetes mellitus, pig","secondary_identifiers":["OMIA:000284-9823"],"termid":"MONDO:1011605","xrefs":{"Monarch":{"xref_id":"1011605"}}}


id: GO:0039021
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the glomerulus of the pronephric kidney over time from its initial formation until its mature state. The pronephric glomerulus is part of the pronephric nephron and is restricted to one body segment.","definition_xrefs":["GOC:mtg_kidney_jan10","ZFA:00001557","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glomerulus development","termid":"GO:0032835"},{"relation_name":"part_of","term_name":"pronephric nephron development","termid":"GO:0039019"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pronephric glomerulus development","termid":"GO:0039021"}


id: GO:0140927
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of cyclic-di-GMP from one side of a membrane to the other.","definition_xrefs":["PMID:34965418"],"direct_ancestors":[{"relation_name":"is_a","term_name":"guanine nucleotide transmembrane transporter activity","termid":"GO:0001409"},{"relation_name":"is_a","term_name":"purine ribonucleotide transmembrane transporter activity","termid":"GO:0005346"},{"relation_name":"is_a","term_name":"organic anion transmembrane transporter activity","termid":"GO:0008514"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"cyclic-di-GMP transmembrane transporter activity","termid":"GO:0140927"}


id: FYPO:0000354
data:
  {"alleles_by_uniquename":{"SJAG_00426:allele-1":{"allele_type":"amino_acid_mutation","description":"P363S","gene_uniquename":"SJAG_00426","name":"bbl1-P363S","uniquename":"SJAG_00426:allele-1"},"SJAG_01906:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01906","name":"nem1delta","uniquename":"SJAG_01906:allele-1"},"SJAG_02763:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02763","name":"ned1delta","uniquename":"SJAG_02763:allele-1"},"SJAG_02763:allele-4":{"allele_type":"amino_acid_mutation","description":"S235E; S651E","gene_uniquename":"SJAG_02763","name":"ned1S235E/S651E","synonyms":[{"name":"phosphomimetic","reference":"PMID:26774782","type":"exact"}],"uniquename":"SJAG_02763:allele-4"},"SJAG_02763:allele-5":{"allele_type":"amino_acid_mutation","description":"S499E; S538E; T620E; T638E; S651E","gene_uniquename":"SJAG_02763","name":"ned1-5E","uniquename":"SJAG_02763:allele-5"},"SJAG_03940:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03940","name":"nem2delta","uniquename":"SJAG_03940:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[119922],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0006433"},{"annotations":[119500,119485,119488,119497,119486],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001784"}]},"cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the size, shape, or structure of the endoplasmic reticulum is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal endomembrane system morphology","termid":"FYPO:0000353"},{"relation_name":"output_of","term_name":"abnormal endoplasmic reticulum organization","termid":"FYPO:0000805"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00426":null,"SJAG_01906":null,"SJAG_02763":null,"SJAG_03940":null},"genotype_count":6,"genotypes_by_uniquename":{"bbl1-P363S-P363S-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"bbl1-P363S(aa)","display_uniquename":"bbl1-P363S-P363S-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00426:allele-1","expression":"Not assayed or wild type"}]}]},"ned1-5E-S499E__S538E__T620E__T638E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"ned1-5E(S499E; S538E; T620E; T638E; S651E aa)","display_uniquename":"ned1-5E-S499E__S538E__T620E__T638E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-5","expression":"Not assayed or wild type"}]}]},"ned1S235E_S651E-S235E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"ned1S235E/S651E(S235E; S651E aa)","display_uniquename":"ned1S235E_S651E-S235E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-4","expression":"Not assayed or wild type"}]}]},"ned1delta":{"display_name":"ned1delta","display_uniquename":"ned1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-1","expression":"Null"}]}]},"nem1delta":{"display_name":"nem1delta","display_uniquename":"nem1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01906:allele-1","expression":"Null"}]}]},"nem2delta":{"display_name":"nem2delta","display_uniquename":"nem2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03940:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abnormal endoplasmic reticulum morphology","references_by_uniquename":{"PMID:25318672":null,"PMID:26774782":null},"single_locus_annotated_genes":["SJAG_03940","SJAG_00426","SJAG_01906","SJAG_02763"],"single_locus_genotype_uniquenames":["ned1delta","ned1S235E_S651E-S235E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type","nem1delta","ned1-5E-S499E__S538E__T620E__T638E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type","bbl1-P363S-P363S-amino_acid_mutation-expression-not_assayed_or_wild_type","nem2delta"],"synonyms":[{"name":"abnormal ER morphology","type":"exact"},{"name":"abnormal endoplasmic reticulum morphology during mitotic cell cycle","type":"related"},{"name":"abnormal endoplasmic reticulum morphology during vegetative growth","type":"exact"},{"name":"endoplasmic reticulum morphology: abnormal","type":"related"}],"termid":"FYPO:0000354","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000162":null,"FYPO:0001784":null,"FYPO:0006433":null,"FYPO_EXT:0000001":null}}


id: PBO:0063359
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Purkinje cell protein 4 like 1","termid":"PBO:0063359"}


id: GO:0014826
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which force is generated within smooth muscle tissue, resulting in a change in muscle geometry. This process occurs in the vein. Force generation involves a chemo-mechanical energy conversion step that is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. The vein is a vessel carrying blood away from the capillary beds.","definition_xrefs":["MSH:D014680","GOC:mtg_muscle","MA:0000715"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phasic smooth muscle contraction","termid":"GO:0014821"},{"relation_name":"is_a","term_name":"vascular associated smooth muscle contraction","termid":"GO:0014829"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vein smooth muscle contraction","termid":"GO:0014826"}


id: PBO:0072820
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sterile alpha motif domain containing 13","termid":"PBO:0072820"}


id: GO:1904919
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of L-cystine from the lysosomal lumen across the lysosomal membrane and into the cytosol.","definition_xrefs":["GO_REF:0000078","GOC:kmv","GOC:TermGenie","PMID:22822152"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-cystine transport","termid":"GO:0015811"},{"relation_name":"is_a","term_name":"neutral amino acid transmembrane export from vacuole","termid":"GO:0034489"},{"relation_name":"is_a","term_name":"transmembrane transport from lysosomal lumen to cytosol","termid":"GO:0170063"},{"relation_name":"is_a","term_name":"L-alpha-amino acid transmembrane transport","termid":"GO:1902475"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"L-cystine transmembrane transport from lysosomal lumen to cytosol","synonyms":[{"name":"transmembrane L-cystine transport from lysosomal lumen to cytosol","type":"exact"}],"termid":"GO:1904919"}


id: MONDO:0005185
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An older, deprecated term that encompassed three major types of autoimmune or autoinflammatory arthritis in children: systemic-onset, pauciarticular, or polyarticular arthritis. The juvenile rheumatoid arthritis classification system has been replaced by the International League of Associations for Rheumatology (ILAR) juvenile idiopathic arthritis classification system.","definition_xrefs":["NCIT:C27179"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rheumatoid arthritis","termid":"MONDO:0008383"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"chronic childhood arthritis","secondary_identifiers":["SCTID:410793008","Wikipedia:Juvenile_idiopathic_arthritis"],"synonyms":[{"name":"JRA","type":"exact"},{"name":"Juvenile rheumatoid arthritis","type":"exact"},{"name":"Juvenile rheumatoid arthritis (AQ)","type":"exact"}],"termid":"MONDO:0005185","xrefs":{"Monarch":{"xref_id":"0005185"}}}


id: PBO:0077909
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TPT1 antisense RNA 1","termid":"PBO:0077909"}


id: PATO:0000320
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color hue with medium-low wavelength of that portion of the visible spectrum lying between yellow and blue, evoked in the human observer by radiant energy with wavelengths of approximately 490 to 570 nanometers.","definition_xrefs":["Dictionary:http://dictionary.reference.com/"],"direct_ancestors":[{"relation_name":"is_a","term_name":"color","termid":"PATO:0000014"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"green","termid":"PATO:0000320"}


id: MONDO:0019274
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete other epidermal disorder (obsolete MONDO:0019274)","secondary_identifiers":["Orphanet:79359"],"termid":"MONDO:0019274","xrefs":{"Monarch":{"xref_id":"0019274"}}}


id: MOD:02009
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to N6-stearoyl-L-lysine.","direct_ancestors":[{"relation_name":"is_a","term_name":"N6-acylated L-lysine","termid":"MOD:01875"},{"relation_name":"is_a","term_name":"N-stearoylated residue","termid":"MOD:02010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:01155"},{"rel_name":"is_a","termid":"MOD:01875"}],"interesting_parent_ids":["MOD:01155","MOD:01875"],"is_obsolete":false,"name":"N6-stearoyl-L-lysine","termid":"MOD:02009"}


id: PBO:0064518
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II subunit M","termid":"PBO:0064518"}


id: MONDO:0018951
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Distal myopathy with vocal cord and pharyngeal weakness is an adult-onset, autosomal dominant muscular disease which is characterized by muscle weakness in the feet and hands, combined with vocal or swallowing dysfunction.","definition_xrefs":["Orphanet:600"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant distal myopathy","termid":"MONDO:0016108"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336","MONDO:0000426"],"is_obsolete":false,"name":"distal myopathy with vocal cord weakness","secondary_identifiers":["GARD:1887","UMLS:C1853723","icd11.foundation:1133125258","MEDGEN:342950"],"synonyms":[{"name":"MATR3-related distal myopathy","type":"exact"},{"name":"MPD2","type":"related"},{"name":"VCPDM","type":"exact"},{"name":"distal myopathy 2","type":"related"},{"name":"vocal cord and pharyngeal distal myopathy","type":"related"}],"termid":"MONDO:0018951","xrefs":{"Monarch":{"xref_id":"0018951"}}}


id: GO:0002129
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the ribose of guanosine at position 34 in the anticodon of a tRNA is post-transcriptionally methylated at the 2'-O position.","definition_xrefs":["GOC:hjd","ISBN:155581073X"],"direct_ancestors":[{"relation_name":"is_a","term_name":"wobble position ribose methylation","termid":"GO:0002130"},{"relation_name":"is_a","term_name":"tRNA guanine ribose methylation","termid":"GO:0002938"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006399","GO:0010467"],"is_obsolete":false,"name":"wobble position guanine ribose methylation","termid":"GO:0002129"}


id: PBO:0068821
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 59, pseudogene","termid":"PBO:0068821"}


id: PBO:0042457
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell division cycle 45","termid":"PBO:0042457"}


id: FYPO:0002898
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins, or of specific protein sites, does not occur during a cellular response to a DNA damage stimulus.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein phosphorylation during vegetative growth","termid":"FYPO:0002033"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002494","FYPO:0005447","FYPO:0001320","FYPO:0002274","FYPO:0000002"],"is_obsolete":false,"name":"abolished protein phosphorylation during cellular response to DNA damage","synonyms":[{"name":"abolished protein phosphorylation during cellular response to DNA damage during mitotic cell cycle","type":"related"},{"name":"abolished protein phosphorylation during cellular response to DNA damage during vegetative growth","type":"exact"},{"name":"protein phosphorylation abolished during cellular response to DNA damage","type":"exact"}],"termid":"FYPO:0002898"}


id: GO:0070277
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways by which iodide is converted to diiodine, with the concomitant loss of electrons.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete iodide oxidation (obsolete GO:0070277)","termid":"GO:0070277"}


id: GO:0042984
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of amyloid precursor protein (APP), the precursor of amyloid-beta.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of glycoprotein biosynthetic process","termid":"GO:0010559"},{"relation_name":"regulates","term_name":"amyloid precursor protein biosynthetic process","termid":"GO:0042983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of amyloid precursor protein biosynthetic process","synonyms":[{"name":"regulation of APP biosynthesis","type":"exact"},{"name":"regulation of APP biosynthetic process","type":"exact"},{"name":"regulation of amyloid precursor protein anabolism","type":"exact"},{"name":"regulation of amyloid precursor protein biosynthesis","type":"exact"},{"name":"regulation of amyloid precursor protein formation","type":"exact"},{"name":"regulation of amyloid precursor protein synthesis","type":"exact"}],"termid":"GO:0042984"}


id: GO:1902434
data:
  {"annotated_genes":["SJAG_02463"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[110501],"is_not":false,"summary":null,"term":"GO:1902434"}]},"cv_name":"biological_process","definition":"The directed movement of sulfate from outside of a cell, across the plasma membrane and into the cytosol.","definition_xrefs":["GOC:TermGenie","PMID:14723223"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inorganic anion import across plasma membrane","termid":"GO:0098658"},{"relation_name":"is_a","term_name":"sulfate transmembrane transport","termid":"GO:1902358"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02463":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"sulfate import across plasma membrane","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"sulfate import into cell","type":"exact"},{"name":"sulphate import into cell","type":"exact"}],"termid":"GO:1902434","terms_by_termid":{"GO:1902434":null}}


id: GO:0008144
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binding to a drug, a naturally occurring or synthetic substance, other than a nutrient, that, when administered or applied to an organism, affects the structure or functioning of the organism;typically used in the diagnosis, prevention, or treatment of disease.","definition_xrefs":["GOC:jl","ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete drug binding (obsolete GO:0008144)","termid":"GO:0008144"}


id: PBO:0067796
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 98","termid":"PBO:0067796"}


id: MONDO:0006594
data:
  {"annotated_genes":["SJAG_03850"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86898],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008218"}]},"cv_name":"mondo","definition":"Pemphigus is a group of rare autoimmune diseases that cause blistering of the skin and mucous membranes (mouth, nose, throat, eyes, and genitals).This conditioncan occur at any age, but often strikes people in middle or older age. Studies have shown that some populations may be at greater risk for certain types of pemphigus. For instance, people of Jewish descent and those from India, Southeast Europe, and the Middle East are at greater risk for pemphigus vulargis, while pemphigus foliaceus is more common in North America, Turkey, and South America. Pemphigus is a chronic disease which is best controlled by early diagnosis and treatment.Treatment includes steroids to reduce inflammation,drugs that suppress the immune system responseand antibiotics to treat associated infections. There are four main types of pemphigus: Pemphigus vulgaris Pemphigus foliaceus IgA pemphigus Paraneoplastic pemphigus","direct_ancestors":[{"relation_name":"is_a","term_name":"autoimmune bullous skin disease","termid":"MONDO:0019337"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03850":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005093"],"is_obsolete":false,"name":"pemphigus","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:65172003","UMLS:C0030807","Wikipedia:Pemphigus","NCIT:C34909","ICD10CM:L10","GARD:7352","ICD9:694.4","icd11.foundation:191659986","DOID:9182","EFO:1000749","MESH:D010392","NANDO:1200228","MEDGEN:45369"],"termid":"MONDO:0006594","terms_by_termid":{"MONDO:0008218":null},"xrefs":{"Monarch":{"xref_id":"0006594"}}}


id: GO:0048336
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of mesoderm cell fate determination.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell differentiation","termid":"GO:0045597"},{"relation_name":"is_a","term_name":"regulation of mesodermal cell fate determination","termid":"GO:0048334"},{"relation_name":"is_a","term_name":"positive regulation of cell fate determination","termid":"GO:1905935"},{"relation_name":"positively_regulates","term_name":"mesodermal cell fate determination","termid":"GO:0007500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of mesodermal cell fate determination","synonyms":[{"name":"activation of mesodermal cell fate determination","type":"narrow"},{"name":"stimulation of mesodermal cell fate determination","type":"narrow"},{"name":"up regulation of mesodermal cell fate determination","type":"exact"},{"name":"up-regulation of mesodermal cell fate determination","type":"exact"},{"name":"upregulation of mesodermal cell fate determination","type":"exact"}],"termid":"GO:0048336"}


id: PBO:0062010
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily J member 4 pseudogene","termid":"PBO:0062010"}


id: PBO:0055850
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LRP1 antisense RNA","termid":"PBO:0055850"}


id: GO:0075135
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont interferes with, inhibits or disrupts a calcium signal transduction in the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated suppression of host signal transduction pathway","termid":"GO:0052029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host calcium-mediated signal transduction","synonyms":[{"name":"disruption of host calcium or calmodulin-mediated signal transduction","type":"exact"},{"name":"negative regulation by symbiont of host Ca++ or calmodulin-mediated signal transduction","type":"related"},{"name":"negative regulation by symbiont of host calcium or calmodulin-mediated signal transduction","type":"related"},{"name":"suppression by symbiont of host calcium or calmodulin-mediated signal transduction","type":"related"},{"name":"symbiont-mediated suppression of host calcium or calmodulin-mediated signal transduction","type":"related"}],"termid":"GO:0075135"}


id: RO:0002438
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"An interaction relationship in which the partners are related via a feeding relationship.","direct_ancestors":[{"relation_name":"is_a","term_name":"participates_in_a_biotic-biotic_interaction_with","termid":"RO:0002574"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trophically_interacts_with","termid":"RO:0002438"}


id: MONDO:0700099
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"carcinoma, non-human animal","termid":"MONDO:0700101"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenocarcinoma, non-human animal","termid":"MONDO:0700099","xrefs":{"Monarch":{"xref_id":"0700099"}}}


id: PBO:0080455
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V-set and transmembrane domain containing 2A","termid":"PBO:0080455"}


id: FYPO:0007108
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which centromere clustering takes place during meiotic prophase I, and remains incomplete. Normally, centromeres and SPBs associate during prometaphase I, but not earlier.","definition_xrefs":["PMID:15298676","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiotic centromere clustering","termid":"FYPO:0004086"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000641","FYPO:0000002","FYPO:0000631","FYPO:0000138","FYPO:0001985"],"is_obsolete":false,"name":"abnormal meiotic centromere clustering during meiotic prophase I","synonyms":[{"name":"abnormal centromere clustering during meiotic prophase I","type":"exact"},{"name":"abnormal chromosome retrieval during meiotic prophase I","type":"related"},{"name":"abnormal kinetochore retrieval during meiotic prophase I","type":"related"},{"name":"abnormal meiotic centromere clustering during prophase I","type":"exact"},{"name":"increased unclustered centromeres during meiotic prophase I","type":"related"},{"name":"premature meiotic centromere clustering during meiotic prophase I","type":"related"}],"termid":"FYPO:0007108"}


id: PBO:0050417
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein D pseudogene 1","termid":"PBO:0050417"}


id: PBO:0085427
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Poly(A) binding protein; interacts with the cleavage factor complex CF I, mediates interactions between the 5' cap structure and the 3' mRNA poly(A) tail, involved in control of poly(A) tail length, interacts with translation factor eIF-4G; stimulates, but is not required for the deadenylation activity of the Pan2p-Pan3p poly(A)-ribonuclease complex","termid":"PBO:0085427"}


id: MONDO:0002121
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Neuritis of a single nerve.","direct_ancestors":[{"relation_name":"is_a","term_name":"mononeuropathy","termid":"MONDO:0001397"},{"relation_name":"is_a","term_name":"neuritis","termid":"MONDO:0002122"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"mononeuritis simplex","secondary_identifiers":["SCTID:32595002","DOID:1802","ICD9:355.9","MEDGEN:65914","UMLS:C0235880"],"synonyms":[{"name":"mononeuritis","type":"exact"}],"termid":"MONDO:0002121","xrefs":{"Monarch":{"xref_id":"0002121"}}}


