# terms

id: PBO:0013441
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterochromatic mRNAs transcribed in cid14delta are not translated","termid":"PBO:0013441"}


id: PBO:0089395
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF757 family protein, human PBDC1 ortholog","termid":"PBO:0089395"}


id: GO:0140249
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a protein at a postsynapse.","definition_xrefs":["PMID:17062563"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein catabolic process at synapse","termid":"GO:0140246"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0030163"}],"interesting_parent_ids":["GO:0030163","GO:0008150"],"is_obsolete":false,"name":"protein catabolic process at postsynapse","termid":"GO:0140249"}


id: PBO:0047320
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAT atypical cadherin 4","termid":"PBO:0047320"}


id: FYPO:0007860
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the spindle pole body (SPB) duplicates normally, and the SPBs separate, in a cell that does not form a mitotic spindle or undergo cytokinesis. The DNA and nucleus may go on to divide in the absence of a spindle, with each DNA mass associated with an SPB.","definition_xrefs":["PMID:20967237","PomBase:jh","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell cycle process","termid":"FYPO:0002734"},{"relation_name":"part_of","term_name":"nuclear division in absence of mitotic spindle","termid":"FYPO:0007859"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000337","FYPO:0000002","FYPO:0000631","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"spindle pole body separation in absence of mitotic spindle","synonyms":[{"name":"SPB separation in absence of mitotic spindle","type":"exact"},{"name":"spindle pole body separation in absence of mitotic spindle during mitotic cell cycle","type":"related"},{"name":"spindle pole body separation in absence of mitotic spindle during vegetative growth","type":"exact"}],"termid":"FYPO:0007860"}


id: PBO:0000340
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally regulates ctr4","termid":"PBO:0000340"}


id: PATO:0002035
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A spatial quality inhering in a bearer by virtue of the bearer's being on the same side in relation to another structure.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"position","termid":"PATO:0000140"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ipsilateral to","synonyms":[{"name":"ipsilateral","type":"exact"}],"termid":"PATO:0002035"}


id: PBO:0087857
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcriptional activator in nitrogen catabolite repression system; localization and activity regulated by quality of nitrogen source and Ure2p; full-length protein forms prion-like aggregates when overproduced","termid":"PBO:0087857"}


id: MOD:01933
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively cross-links four L-lysine residues to form desmosine.","definition_xrefs":["PubMed:13941623","PubMed:14109938","RESID:AA0587","PubMed:14109939","ChEBI:37629","PubMed:5839176"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyridinyl ring crosslinked residues","termid":"MOD:01425"},{"relation_name":"is_a","term_name":"crosslinked L-lysine residue","termid":"MOD:02051"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"desmosine","synonyms":[{"name":"4-[(4S)-4-amino-4-carboxybutyl]-1-[(5S)-5-amino-5-carboxypentyl]-3,5-bis[(3S)-3-amino-3-carboxypropyl]pyridinium","type":"exact"},{"name":"6-[4-(4-amino-4-carboxybutyl)-3,5-bis(3-amino-3-carboxypropyl)pyridinio]norleucine","type":"exact"},{"name":"desmosine","type":"exact"}],"termid":"MOD:01933"}


id: PBO:0001630
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase Rrp3 (predicted)","termid":"PBO:0001630"}


id: MONDO:0019898
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Distal monosomy 14q is a rare chromosomal anomaly associated with various phenotypic features depending on the size of the deletion. The clinical features may include global developmental delay, hypotonia, congenital heart defects, dysmorphic features (high forehead, small palpebral fissures, epicanthi, blepharophimosis, broad and flat nasal bridge, broad philtrum, thin upper lip, high arched palate, pointed chin, malformed ears). High-pitched, weak cry, seizures and various dental and oftalmological anomalies were also reported.","definition_xrefs":["Orphanet:96150"],"direct_ancestors":[{"relation_name":"is_a","term_name":"partial deletion of the long arm of chromosome 14","termid":"MONDO:0016912"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"distal monosomy 14q","secondary_identifiers":["MEDGEN:1656422","UMLS:C4749276","GARD:19329"],"synonyms":[{"name":"distal deletion 14q","type":"exact"},{"name":"distal monosomy type 14q","type":"exact"},{"name":"telomeric deletion 14q","type":"exact"}],"termid":"MONDO:0019898","xrefs":{"Monarch":{"xref_id":"0019898"}}}


id: PBO:0007918
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved ATP binding protein, implicated in sister chromatid cohesion","termid":"PBO:0007918"}


id: GO:0009554
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the megasporocyte undergoes meiosis, giving rise to four haploid megaspores in the nucellus.","definition_xrefs":["GOC:tb","GOC:mtg_plant"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plant-type sporogenesis","termid":"GO:0048236"},{"relation_name":"part_of","term_name":"embryo sac development","termid":"GO:0009553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"megasporogenesis","synonyms":[{"name":"megaspore development","type":"exact"},{"name":"megaspore mother cell meiosis","type":"exact"},{"name":"meiosis of the megasporocyte","type":"exact"},{"name":"meiotic division of the megasporocyte","type":"exact"}],"termid":"GO:0009554"}


id: PBO:0001900
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA polymerase zeta catalytic subunit Rev3 (predicted)","termid":"PBO:0001900"}


id: PBO:0056888
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial calcium uptake family member 3","termid":"PBO:0056888"}


id: GO:0046280
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of chalcone, phenyl steryl ketone or its hydroxylated derivatives.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chalcone metabolic process","termid":"GO:0009714"},{"relation_name":"is_a","term_name":"ketone catabolic process","termid":"GO:0042182"},{"relation_name":"is_a","term_name":"phenylpropanoid catabolic process","termid":"GO:0046271"},{"relation_name":"is_a","term_name":"olefinic compound catabolic process","termid":"GO:0120256"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0019748","GO:0044281"],"is_obsolete":false,"name":"chalcone catabolic process","synonyms":[{"name":"chalcone breakdown","type":"exact"},{"name":"chalcone catabolism","type":"exact"},{"name":"chalcone degradation","type":"exact"}],"termid":"GO:0046280"}


id: PR:O59713
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A diphthamide biosynthesis protein 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03685","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diphthamide biosynthesis protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3B8.05","secondary_identifiers":["UniProtKB:O59713"],"synonyms":[{"name":"Spom972h-DPH1","type":"exact"}],"termid":"PR:O59713"}


id: MOD:01661
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-tyrosine residue to pyruvic acid.","definition_xrefs":["PubMed:8464063","PubMed:10085076","RESID:AA0127#TYR","PubMed:500639","PubMed:3042771"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-tyrosine residue","termid":"MOD:00919"},{"relation_name":"is_a","term_name":"pyruvic acid","termid":"MOD:01154"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyruvic acid (Tyr)","synonyms":[{"name":"2-oxopropanoic acid","type":"exact"},{"name":"MOD_RES Pyruvic acid (Tyr)","type":"exact"},{"name":"pyruvic acid","type":"exact"}],"termid":"MOD:01661"}


id: MONDO:1010156
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Brachydactyly that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of development or morphogenesis, non-human animal","termid":"MONDO:1011313"},{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"musculoskeletal system disorder, non-human animal","termid":"MONDO:1011335"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brachydactyly, non-human animal","secondary_identifiers":["OMIA:000146"],"termid":"MONDO:1010156","xrefs":{"Monarch":{"xref_id":"1010156"}}}


id: PBO:0067317
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 403, pseudogene","termid":"PBO:0067317"}


id: GO:0045456
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of ecdysteroids, a group of polyhydroxylated ketosteroids which initiate post-embryonic development.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid biosynthetic process","termid":"GO:0006694"},{"relation_name":"is_a","term_name":"ketone biosynthetic process","termid":"GO:0042181"},{"relation_name":"is_a","term_name":"hormone biosynthetic process","termid":"GO:0042446"},{"relation_name":"is_a","term_name":"ecdysteroid metabolic process","termid":"GO:0045455"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006629"],"is_obsolete":false,"name":"ecdysteroid biosynthetic process","synonyms":[{"name":"ecdysteroid anabolism","type":"exact"},{"name":"ecdysteroid biosynthesis","type":"exact"},{"name":"ecdysteroid formation","type":"exact"},{"name":"ecdysteroid synthesis","type":"exact"}],"termid":"GO:0045456"}


id: MONDO:0011879
data:
  {"annotated_genes":["SJAG_02695"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86561],"is_not":false,"summary":null,"term":"MONDO:0011879"}]},"cv_name":"mondo","definition":"Any neuronopathy, distal hereditary motor in which the cause of the disease is a mutation in the DCTN1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"distal hereditary motor neuropathy type 7","termid":"MONDO:0015355"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02695":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0000426","MONDO:0005244"],"is_obsolete":false,"name":"neuronopathy, distal hereditary motor, type 7B","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C1843315","GARD:18270","MESH:C564362","DOID:0111202","OMIM:607641","MEDGEN:375157"],"synonyms":[{"name":"DCTN1 neuronopathy, distal hereditary motor","type":"exact"},{"name":"Dhmn7B","type":"related"},{"name":"HMN 7B","type":"related"},{"name":"HMN7B","type":"related"},{"name":"Lower motor neuron disease, dynactin type","type":"related"},{"name":"neuronopathy, distal hereditary motor caused by mutation in DCTN1","type":"exact"},{"name":"neuronopathy, distal hereditary motor, type VIIB","type":"related"},{"name":"neuropathy, distal hereditary motor, type 7B","type":"related"},{"name":"neuropathy, distal hereditary motor, with vocal cord paralysis, type 7B","type":"related"}],"termid":"MONDO:0011879","terms_by_termid":{"MONDO:0011879":null},"xrefs":{"Monarch":{"xref_id":"0011879"}}}


id: GO:0005799
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete coatomer (obsolete GO:0005799)","synonyms":[{"name":"COPI vesicle","type":"related"},{"name":"coatomer","type":"exact"}],"termid":"GO:0005799"}


id: FYPO:0002324
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of lanosterol measured in a cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cellular sterol level","termid":"FYPO:0002326"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"decreased cellular lanosterol level","synonyms":[{"name":"decreased cellular lanosterol level during mitotic cell cycle","type":"related"},{"name":"decreased cellular lanosterol level during vegetative growth","type":"exact"},{"name":"decreased ergosterol accumulation","type":"related"},{"name":"reduced cellular lanosterol level","type":"exact"}],"termid":"FYPO:0002324"}


id: PBO:0064925
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 6 catalytic subunit","termid":"PBO:0064925"}


id: PBO:0060561
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurobeachin pseudogene 5","termid":"PBO:0060561"}


id: PBO:0074654
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 41B","termid":"PBO:0074654"}


id: PBO:0000289
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat protein, human WDR21 family","termid":"PBO:0000289"}


id: PBO:0046373
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ectonucleoside triphosphate diphosphohydrolase 8","termid":"PBO:0046373"}


id: FYPO:0004451
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of protein measured in a cell during a cellular response to calcium ions is lower than normal. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein level during vegetative growth","termid":"FYPO:0001324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"decreased protein level during cellular response to calcium ion","synonyms":[{"name":"decreased protein accumulation during cellular response to calcium ion","type":"related"},{"name":"decreased protein level during cellular response to calcium","type":"exact"},{"name":"decreased protein level during cellular response to calcium ion during mitotic cell cycle","type":"related"},{"name":"decreased protein level during cellular response to calcium ion during vegetative growth","type":"exact"},{"name":"reduced protein level during cellular response to calcium ion","type":"exact"}],"termid":"FYPO:0004451"}


id: PBO:0062235
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily B member 19 pseudogene","termid":"PBO:0062235"}


id: GO:1903336
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of vacuolar transport.","definition_xrefs":["GOC:vw","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of intracellular transport","termid":"GO:0032387"},{"relation_name":"is_a","term_name":"regulation of vacuolar transport","termid":"GO:1903335"},{"relation_name":"negatively_regulates","term_name":"vacuolar transport","termid":"GO:0007034"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of vacuolar transport","synonyms":[{"name":"down regulation of vacuolar transport","type":"exact"},{"name":"down-regulation of vacuolar transport","type":"exact"},{"name":"downregulation of vacuolar transport","type":"exact"},{"name":"inhibition of vacuolar transport","type":"narrow"}],"termid":"GO:1903336"}


id: PBO:0077977
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ala (CGC) 5-1","termid":"PBO:0077977"}


id: PBO:0053499
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 479","termid":"PBO:0053499"}


id: GO:0075112
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the symbiont alters a transmembrane receptor-mediated signal transduction in the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete symbiont-mediated perturbation of host transmembrane receptor-mediated signal transduction (obsolete GO:0075112)","synonyms":[{"name":"modulation by symbiont of host transmembrane receptor-mediated signal transduction","type":"exact"},{"name":"perturbation of host transmembrane receptor-mediated signal transduction","type":"exact"}],"termid":"GO:0075112"}


id: GO:0003938
data:
  {"annotated_genes":["SJAG_01298"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[75234],"is_not":false,"summary":null,"term":"GO:0003938"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: inosine 5'-phosphate + NAD+ + H2O = xanthosine 5'-phosphate + NADH + H+.","definition_xrefs":["EC:1.1.1.205"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01298":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"IMP dehydrogenase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:IMP-DEHYDROG-RXN","RHEA:11708","Reactome:R-HSA-9748945","Reactome:R-HSA-73794"],"synonyms":[{"name":"IMP oxidoreductase activity","type":"related"},{"name":"IMP:NAD+ oxidoreductase activity","type":"related"},{"name":"inosinate dehydrogenase activity","type":"related"},{"name":"inosine 5'-monophosphate dehydrogenase activity","type":"related"},{"name":"inosine monophosphate dehydrogenase activity","type":"related"},{"name":"inosine monophosphate oxidoreductase activity","type":"related"},{"name":"inosine-5'-phosphate dehydrogenase activity","type":"related"},{"name":"inosinic acid dehydrogenase activity","type":"related"}],"termid":"GO:0003938","terms_by_termid":{"GO:0003938":null}}


id: GO:0035050
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the embryonic heart tube over time, from its formation to the mature structure. The heart tube forms as the heart rudiment from the heart field.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tube development","termid":"GO:0035295"},{"relation_name":"is_a","term_name":"epithelium development","termid":"GO:0060429"},{"relation_name":"part_of","term_name":"heart development","termid":"GO:0007507"},{"relation_name":"part_of","term_name":"embryonic organ development","termid":"GO:0048568"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"embryonic heart tube development","termid":"GO:0035050"}


id: GO:0051473
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of glucosylglycerol, alpha-D-glucopyranosyl-alpha-(1,2)-glycerol.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycoside biosynthetic process","termid":"GO:0016138"},{"relation_name":"is_a","term_name":"alditol biosynthetic process","termid":"GO:0019401"},{"relation_name":"is_a","term_name":"glucosylglycerol metabolic process","termid":"GO:0051472"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"glucosylglycerol biosynthetic process","synonyms":[{"name":"glucosylglycerol anabolism","type":"exact"},{"name":"glucosylglycerol biosynthesis","type":"exact"},{"name":"glucosylglycerol formation","type":"exact"},{"name":"glucosylglycerol synthesis","type":"exact"}],"termid":"GO:0051473"}


id: PBO:0073866
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 9 member B1 pseudogene 2","termid":"PBO:0073866"}


id: PBO:0087778
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit VIa of cytochrome c oxidase; present in a subclass of cytochrome c oxidase complexes that may have a role in mimimizing generation of reactive oxygen species; not essential for cytochrome c oxidase activity but may modulate activity in response to ATP; required for assembly of Rcf2p into cytochrome c oxidase - cytochrome bc1 supercomplexes","termid":"PBO:0087778"}


id: GO:0140365
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A ribonucleoprotein granule located in the cytoplasm of bacteria, minimally containing the RNase E protein and RNA molecules. Bacterial RNP-bodies are similar to eukaryotic P-bodies and stress granules.","definition_xrefs":["PMID:30197298"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic ribonucleoprotein granule","termid":"GO:0036464"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"RNP body","synonyms":[{"name":"BR-body","type":"exact"}],"termid":"GO:0140365"}


id: PR:Q92399
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA-directed RNA polymerases I, II, and III subunit RPABC3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR10917:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-directed RNA polymerases I, II, and III subunit RPABC3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC14C8.12","secondary_identifiers":["UniProtKB:Q92399"],"synonyms":[{"name":"DNA-directed RNA polymerases I, II, and III 14.5 kDa polypeptide (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"RNA polymerases I, II, and III subunit ABC3 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"RPC14 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SPBC14C8.12","type":"related"},{"name":"Spom972h-POLR2H","type":"exact"}],"termid":"PR:Q92399"}


id: MONDO:1010727
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any leukocyte adhesion deficiency that occurs in dogs due to a mutation in the ITGB2 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukocyte adhesion deficiency, non-human animal","termid":"MONDO:1012580"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leukocyte adhesion deficiency, ITGB2-related, dog","secondary_identifiers":["OMIA:000595-9615"],"synonyms":[{"name":"leukocyte adhesion deficiency type I, dog","type":"related"}],"termid":"MONDO:1010727","xrefs":{"Monarch":{"xref_id":"1010727"}}}


id: PBO:0001285
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal recognition particle subunit Srp21 (predicted)","termid":"PBO:0001285"}


id: GO:0032792
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the activity of the transcription factor CREB.","definition_xrefs":["GOC:dph","GOC:tb","GOC:ecd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of DNA-binding transcription factor activity","termid":"GO:0043433"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0006351","GO:0010467","GO:0008150","GO:0006355"],"is_obsolete":false,"name":"negative regulation of CREB transcription factor activity","synonyms":[{"name":"CREB inhibitor","type":"related"},{"name":"inhibition of CREB transcription factor","type":"exact"}],"termid":"GO:0032792"}


id: PBO:0077822
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TP53 target 3","termid":"PBO:0077822"}


id: GO:0036084
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of GDP-fucose into the endoplasmic reticulum lumen. GDP-fucose is a substance composed of fucose in glycosidic linkage with guanosine diphosphate.","definition_xrefs":["GOC:sart","PMID:3458237"],"direct_ancestors":[{"relation_name":"is_a","term_name":"GDP-fucose transmembrane transport","termid":"GO:0015783"},{"relation_name":"is_a","term_name":"cytosol to endoplasmic reticulum transport","termid":"GO:0046967"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"GDP-fucose import into endoplasmic reticulum lumen","synonyms":[{"name":"GDP-fucose import into endoplasmic reticulum","type":"exact"},{"name":"GDP-fucose transport across endoplasmic reticulum membrane","type":"exact"},{"name":"GDP-fucose transport into endoplasmic reticulum lumen","type":"exact"}],"termid":"GO:0036084"}


id: PBO:0080704
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Wnt family member 7B","termid":"PBO:0080704"}


id: GO:0080184
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as the result of a phenylpropanoid stimulus. The process begins with detection of the stimulus and ends with a change in state or activity or the cell or organism. A phenylpropanoid is any of secondary metabolites with structures based on a phenylpropane skeleton. The class includes phenylpropanoid esters, flavonoids, anthocyanins, coumarins and many small phenolic molecules. Phenylpropanoids are also precursors of lignin.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to chemical","termid":"GO:0042221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to phenylpropanoid","termid":"GO:0080184"}


id: MONDO:0100181
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inherited susceptibility or predisposition to developing atopic dermatitis. A genomewide linkage study revealed highly significant evidence for linkage on 3q21 (ATOD1) at marker D3S3606.","definition_xrefs":["OMIM:603165","MONDO:patterns/inherited_susceptibility"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dermatitis, atopic, susceptibility to","termid":"MONDO:0100178"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dermatitis, atopic, 1","synonyms":[{"name":"ATOD1","type":"exact"},{"name":"dermatitis, atopic, susceptibility to, 1","type":"exact"}],"termid":"MONDO:0100181","xrefs":{"Monarch":{"xref_id":"0100181"}}}


id: PR:O94274
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBP8B7.26 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94274"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein P8B7.26 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP8B7.26","synonyms":[{"name":"Spom972h-SPBP8B7.26","type":"exact"}],"termid":"PR:O94274"}


id: MONDO:0011339
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any hereditary spastic paraplegia in which the cause of the disease is a mutation in the WASHC5 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pure hereditary spastic paraplegia","termid":"MONDO:0015149"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"hereditary spastic paraplegia 8","secondary_identifiers":["MEDGEN:400359","MESH:C580458","DOID:0110823","OMIM:603563","Orphanet:100989","UMLS:C1863704","GARD:9591"],"synonyms":[{"name":"SPG8","type":"exact"},{"name":"WASHC5 hereditary spastic paraplegia","type":"exact"},{"name":"autosomal dominant spastic paraplegia 8","type":"exact"},{"name":"autosomal dominant spastic paraplegia type 8","type":"exact"},{"name":"hereditary spastic paraplegia caused by mutation in WASHC5","type":"exact"},{"name":"hereditary spastic paraplegia type 8","type":"exact"},{"name":"spastic paraplegia 8","type":"related"},{"name":"spastic paraplegia 8, autosomal dominant","type":"related"}],"termid":"MONDO:0011339","xrefs":{"Monarch":{"xref_id":"0011339"}}}


id: SO:0000165
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A cis-acting sequence that increases the utilization of (some) eukaryotic promoters, and can function in either orientation and in any location (upstream or downstream) relative to the promoter.","direct_ancestors":[{"relation_name":"is_a","term_name":"cis_regulatory_module","termid":"SO:0000727"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"enhancer","secondary_identifiers":["http://en.wikipedia.org/wiki/Enhancer_(genetics)"],"synonyms":[{"name":"INSDC_feature:regulatory","type":"broad"},{"name":"INSDC_qualifier:enhancer","type":"exact"}],"termid":"SO:0000165"}


id: MONDO:0024313
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An infection caused by Staphylococcus.","definition_xrefs":["NCIT:C35038"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bacterial infectious disease","termid":"MONDO:0005113"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"staphylococcal infection","secondary_identifiers":["MEDGEN:52483","UMLS:C0038160","MESH:D013203","SCTID:56038003","EFO:1001849"],"synonyms":[{"name":"staphylococcal infection","type":"exact"}],"termid":"MONDO:0024313","xrefs":{"Monarch":{"xref_id":"0024313"}}}


id: PBO:0043181
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDGSH iron sulfur domain 1 pseudogene 1","termid":"PBO:0043181"}


id: GO:0000230
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A chromosome found in the nucleus during mitosis.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete nuclear mitotic chromosome (obsolete GO:0000230)","synonyms":[{"name":"nuclear mitotic chromosome","type":"exact"}],"termid":"GO:0000230"}


id: SO:0000538
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Recombination signal including V-heptamer, V-spacer and V-nonamer in 3' of V-region of a V-gene or V-sequence of an immunoglobulin/T-cell receptor gene.","direct_ancestors":[{"relation_name":"is_a","term_name":"vertebrate_immune_system_gene_recombination_signal_feature","termid":"SO:0000939"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V_gene_recombination_feature","synonyms":[{"name":"V gene recombination feature","type":"exact"},{"name":"V-RS","type":"exact"}],"termid":"SO:0000538"}


id: GO:2000043
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cardiac cell fate specification.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell fate specification","termid":"GO:0042659"},{"relation_name":"is_a","term_name":"regulation of cardiocyte differentiation","termid":"GO:1905207"},{"relation_name":"regulates","term_name":"cardiac cell fate specification","termid":"GO:0060912"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cardiac cell fate specification","termid":"GO:2000043"}


id: PR:O94494
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sim4 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94494"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centromere protein sim4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC18E5.03c","synonyms":[{"name":"Spom972h-sim4","type":"exact"},{"name":"silencing in the middle of the centromere protein 4 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94494"}


id: GO:0004343
data:
  {"annotated_genes":["SJAG_00519"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[71207],"is_not":false,"summary":null,"term":"GO:0004343"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: D-glucosamine 6-phosphate + acetyl-CoA = N-acetyl-D-glucosamine 6-phosphate + CoA + H+.","definition_xrefs":["RHEA:10292","EC:2.3.1.4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acetyltransferase activity","termid":"GO:0008080"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00519":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016746","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"glucosamine 6-phosphate N-acetyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-449734","KEGG_REACTION:R02058","MetaCyc:GLUCOSAMINEPNACETYLTRANS-RXN"],"synonyms":[{"name":"D-glucosamine-6-P N-acetyltransferase activity","type":"related"},{"name":"N-acetylglucosamine-6-phosphate synthase activity","type":"related"},{"name":"acetyl-CoA:D-glucosamine-6-phosphate N-acetyltransferase activity","type":"related"},{"name":"aminodeoxyglucosephosphate acetyltransferase activity","type":"related"},{"name":"glucosamine 6-phosphate acetylase activity","type":"related"},{"name":"glucosamine-6-phosphate acetylase activity","type":"related"},{"name":"glucosamine-phosphate N-acetyltransferase activity","type":"exact"},{"name":"phosphoglucosamine N-acetylase activity","type":"related"},{"name":"phosphoglucosamine acetylase activity","type":"related"},{"name":"phosphoglucosamine transacetylase activity","type":"related"}],"termid":"GO:0004343","terms_by_termid":{"GO:0004343":null}}


id: GO:0018133
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of a peptidyl serine-peptidyl cysteine cross-link by the condensation of a serine hydroxyl with the carbonyl of the preceding residue.","definition_xrefs":["RESID:AA0239"],"gene_count":0,"genotype_count":0,"name":"obsolete peptide cross-linking via L-cysteine oxazolinecarboxylic acid (obsolete GO:0018133)","termid":"GO:0018133"}


id: PBO:0039628
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annexin A10","termid":"PBO:0039628"}


id: FYPO:0000030
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which chromosome congression is abnormal during mitosis. Chromosome congression is the alignment of chromosomes at the metaphase plate, a plane halfway between the poles of the spindle.","definition_xrefs":["PomBase:mah","GO:0051310"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic sister chromatid segregation","termid":"FYPO:0000141"},{"relation_name":"is_a","term_name":"abnormal organelle localization","termid":"FYPO:0006329"},{"relation_name":"part_of","term_name":"abnormal mitotic sister chromatid segregation","termid":"FYPO:0000141"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000631","FYPO:0000641","FYPO:0000138","FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0000337"],"is_obsolete":false,"name":"abnormal mitotic chromosome congression","synonyms":[{"name":"abnormal chromosome congression at mitotic metaphase plate","type":"exact"},{"name":"abnormal chromosome congression during mitotic cell cycle","type":"related"},{"name":"abnormal chromosome congression during vegetative growth","type":"exact"},{"name":"abnormal mitotic metaphase plate congression","type":"exact"},{"name":"chromosome segregation defects, chromosome congression","type":"exact"}],"termid":"FYPO:0000030"}


id: PR:O14188
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rng2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14188"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ras GTPase-activating-like protein rng2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4F8.13c","synonyms":[{"name":"Ring assembly protein 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-rng2","type":"exact"}],"termid":"PR:O14188"}


id: GO:0120107
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The rotor complex of the bacterial-type flagellum consists of a membrane-anchored ring and the motor switch complex, which participates in the conversion of proton/Na+ energy into the mechanical work of rotation and controls the direction of flagellar rotation.","definition_xrefs":["PMID:25251856","GOC:cilia","PMID:12624192","PMID:10572114"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"bacterial-type flagellum motor","termid":"GO:0120100"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"bacterial-type flagellum rotor complex","termid":"GO:0120107"}


id: GO:0032031
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to the head/neck region of a myosin I heavy chain.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myosin head/neck binding","termid":"GO:0032028"},{"relation_name":"is_a","term_name":"myosin I heavy chain binding","termid":"GO:0032037"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0008092"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0008092","GO:0005515"],"is_obsolete":false,"name":"myosin I head/neck binding","termid":"GO:0032031"}


id: GO:0014854
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an inactivity stimulus.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to stimulus","termid":"GO:0050896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to inactivity","termid":"GO:0014854"}


id: MONDO:0014631
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial primary hypomagnesemia with normocalciuria and normocalcemia","termid":"MONDO:0018101"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005240"],"is_obsolete":false,"name":"hypomagnesemia, seizures, and intellectual disability","secondary_identifiers":["OMIMPS:616418"],"synonyms":[{"name":"HOMGSMR","type":"related"},{"name":"hypomagnesemia, seizures, and intellectual disability","type":"exact"},{"name":"hypomagnesemia, seizures, and mental retardation","type":"exact"}],"termid":"MONDO:0014631","xrefs":{"Monarch":{"xref_id":"0014631"}}}


id: MONDO:0015060
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Mosaic trisomy 3 is a rare chromosomal anomaly syndrome with high phenotypic variability ranging from a mild phenotype presenting joint pain and laxity, mild facial dysmorphism (e.g. long facies, prominent eyes, dysplastic ears, downturned corners of the mouth, micrognathia) and no developmental delays to more severe phenotypes including short stature, intellectual disability, severe developmental delays, additional craniofacial dysmorphic features (e.g. brachycephaly, high forehead, flat midface, short neck) and hearing impairment, as well as skeletal (e.g. pectus excavatum, scoliosis), ocular (e.g. coloboma) and cardiac abnormalities.","definition_xrefs":["Orphanet:100071"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome 3 disorder","termid":"MONDO:0700010"},{"relation_name":"is_a","term_name":"trisomy","termid":"MONDO:0700065"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mosaic trisomy 3","secondary_identifiers":["GARD:5342","MEDGEN:1646607","SCTID:764627005","UMLS:C4707012"],"synonyms":[{"name":"Mosaic trisomy chromosome 3","type":"exact"},{"name":"Mosaic trisomy type 3","type":"exact"},{"name":"trisomy 3 mosaicism","type":"exact"}],"termid":"MONDO:0015060","xrefs":{"Monarch":{"xref_id":"0015060"}}}


id: GO:0034438
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of a lipoprotein by oxidation of one or more amino acids in the protein.","definition_xrefs":["GOC:BHF","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete lipoprotein amino acid oxidation (obsolete GO:0034438)","termid":"GO:0034438"}


id: PBO:0078602
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 60 pseudogene 15","termid":"PBO:0078602"}


id: PBO:0041936
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CBX3 pseudogene 4","termid":"PBO:0041936"}


id: SO:0001448
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A polar, hydorophilic amino acid encoded by the codons CAA and CAG. ","direct_ancestors":[{"relation_name":"is_a","term_name":"amino_acid","termid":"SO:0001237"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamine","synonyms":[{"name":"Gln","type":"exact"},{"name":"Q","type":"exact"}],"termid":"SO:0001448"}


id: MONDO:0030902
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial complex I deficiency, nuclear type","termid":"MONDO:0100223"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004069"],"is_obsolete":false,"name":"mitochondrial complex 1 deficiency, nuclear type 36","secondary_identifiers":["UMLS:C5436935","GARD:16431","MEDGEN:1773965","OMIM:619170"],"synonyms":[{"name":"MC1DN36","type":"exact"},{"name":"mitochondrial complex 1 deficiency, nuclear type 36","type":"exact"},{"name":"mitochondrial complex I deficiency, nuclear type 36","type":"exact"}],"termid":"MONDO:0030902","xrefs":{"Monarch":{"xref_id":"0030902"}}}


id: GO:1903288
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of potassium ion import across the plasma membrane.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","GOC:BHF","GOC:rl","PMID:10636900","GOC:mtg_cardiac_conduct_nov11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of potassium ion transmembrane transport","termid":"GO:1901381"},{"relation_name":"is_a","term_name":"regulation of potassium ion import","termid":"GO:1903286"},{"relation_name":"positively_regulates","term_name":"potassium ion import across plasma membrane","termid":"GO:1990573"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"positively_regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"positive regulation of potassium ion import across plasma membrane","synonyms":[{"name":"activation of potassium import","type":"narrow"},{"name":"activation of potassium ion import","type":"narrow"},{"name":"activation of potassium ion uptake","type":"narrow"},{"name":"positive regulation of potassium import","type":"exact"},{"name":"positive regulation of potassium ion import","type":"broad"},{"name":"positive regulation of potassium ion uptake","type":"exact"},{"name":"up regulation of potassium import","type":"exact"},{"name":"up regulation of potassium ion import","type":"exact"},{"name":"up regulation of potassium ion uptake","type":"exact"},{"name":"up-regulation of potassium import","type":"exact"},{"name":"up-regulation of potassium ion import","type":"exact"},{"name":"up-regulation of potassium ion uptake","type":"exact"},{"name":"upregulation of potassium import","type":"exact"},{"name":"upregulation of potassium ion import","type":"exact"},{"name":"upregulation of potassium ion uptake","type":"exact"}],"termid":"GO:1903288"}


id: GO:2001059
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a D-tagatose 6-phosphate.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organophosphate catabolic process","termid":"GO:0046434"},{"relation_name":"is_a","term_name":"carbohydrate derivative catabolic process","termid":"GO:1901136"},{"relation_name":"is_a","term_name":"D-tagatose 6-phosphate metabolic process","termid":"GO:2001058"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"D-tagatose 6-phosphate catabolic process","secondary_identifiers":["UniPathway:UPA00704"],"synonyms":[{"name":"D-tagatose 6-phosphate catabolism","type":"exact"}],"termid":"GO:2001059"}


id: PBO:0028846
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_snRNA_splicing","termid":"PBO:0028846"}


id: GO:1902711
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex which is capable of GABA-A receptor activity. In human, it is usually composed of either two alpha, two beta and one gamma chain of the GABA-A receptor subunits or 5 chains of the GABA-A receptor subunits rho1-3 (formally known as GABA-C receptor).","definition_xrefs":["GO_REF:0000088","GOC:TermGenie","GOC:bhm","PMID:18790874"],"direct_ancestors":[{"relation_name":"is_a","term_name":"GABA receptor complex","termid":"GO:1902710"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"GABA-A receptor complex","termid":"GO:1902711"}


id: GO:0006560
data:
  {"annotated_genes":["SJAG_03457","SJAG_01903","SJAG_00660","SJAG_02235","SJAG_00495","SJAG_03398","SJAG_00120"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[78663,113587],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010121"},{"annotations":[67580,64709,78277,91246],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0055129"},{"annotations":[70667,78390],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010133"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving proline (pyrrolidine-2-carboxylic acid), a chiral, cyclic, nonessential alpha-amino acid found in peptide linkage in proteins.","definition_xrefs":["ISBN:0198506732","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glutamine family amino acid metabolic process","termid":"GO:0009064"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00120":null,"SJAG_00495":null,"SJAG_00660":null,"SJAG_01903":null,"SJAG_02235":null,"SJAG_03398":null,"SJAG_03457":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0006520","GO:0044281"],"is_obsolete":false,"name":"proline metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000107":null},"synonyms":[{"name":"proline metabolism","type":"exact"}],"termid":"GO:0006560","terms_by_termid":{"GO:0010121":null,"GO:0010133":null,"GO:0055129":null}}


id: MONDO:0004804
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation and enlargement of the lacrimal gland.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inflammatory disease","termid":"MONDO:0021166"},{"relation_name":"is_a","term_name":"disorder of lacrimal gland","termid":"MONDO:0024625"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"dacryoadenitis","secondary_identifiers":["DOID:950","ICD9:375.00","MEDGEN:102328","ICD9:375.0","NCIT:C26971","UMLS:C0155223","SCTID:86927009","MESH:D003607"],"synonyms":[{"name":"inflammation of lacrimal gland","type":"exact"},{"name":"lacrimal gland inflammation","type":"exact"}],"termid":"MONDO:0004804","xrefs":{"Monarch":{"xref_id":"0004804"}}}


id: GO:0060709
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a glycogen cell of the placenta. A glycogen cell is a vacuolated glycogen-rich cell that appears in compact cell islets of the spongiotrophoblast layer.","definition_xrefs":["GOC:dph","PMID:16269175"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation involved in embryonic placenta development","termid":"GO:0060706"},{"relation_name":"part_of","term_name":"spongiotrophoblast layer development","termid":"GO:0060712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glycogen cell differentiation involved in embryonic placenta development","termid":"GO:0060709"}


id: MONDO:0014902
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any nasopharyngeal carcinoma in which the cause of the disease is a mutation in the MST1R gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary neoplastic syndrome","termid":"MONDO:0015356"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nasopharyngeal carcinoma, susceptibility to, 3","secondary_identifiers":["UMLS:C4310729","OMIM:617075","MEDGEN:934696"],"synonyms":[{"name":"MST1R nasopharyngeal carcinoma","type":"exact"},{"name":"NPCA3","type":"exact"},{"name":"nasopharyngeal carcinoma caused by mutation in MST1R","type":"exact"},{"name":"nasopharyngeal carcinoma, susceptibility to, 3","type":"exact"},{"name":"nasopharyngeal carcinoma, susceptibility to, 3; NPCA3","type":"exact"},{"name":"nasopharyngeal carcinoma, susceptibility to, type 3","type":"exact"},{"name":"susceptibility to nasopharyngeal carcinoma 3","type":"related"}],"termid":"MONDO:0014902","xrefs":{"Monarch":{"xref_id":"0014902"}}}


id: PBO:0043368
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"clusterin","termid":"PBO:0043368"}


id: GO:0003338
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the metanephros are generated and organized.","definition_xrefs":["GOC:dph","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kidney morphogenesis","termid":"GO:0060993"},{"relation_name":"part_of","term_name":"metanephros development","termid":"GO:0001656"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephros morphogenesis","termid":"GO:0003338"}


id: MONDO:0010810
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autosomal recessive form of rickets caused by inactivating mutation(s) in the CYP2R1 gene, encoding vitamin D 25-hydroxylase, the hepatic enzyme that converts vitamin D to 25-hydroxyvitamin D, the precursor of 1,25-dihydroxyvitamin D (calcitriol). The condition is characterized by reduced serum concentrations of 25-hydroxyvitamin D, hypophosphatemia, hypocalcemia with secondary hyperparathyroidism and elevated serum alkaline phosphatase, and by failure to thrive, seizures, muscle weakness, and rickets.","definition_xrefs":["NCIT:C131074"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited lipid metabolism disorder","termid":"MONDO:0002525"},{"relation_name":"is_a","term_name":"vitamin D-dependent rickets, type 1","termid":"MONDO:0009924"},{"relation_name":"is_a","term_name":"steroid metabolism disease","termid":"MONDO:0045012"},{"relation_name":"is_a","term_name":"abnormal mineralization disorder","termid":"MONDO:0800096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0002525"],"is_obsolete":false,"name":"vitamin D hydroxylation-deficient rickets, type 1B","secondary_identifiers":["MEDGEN:374020","DOID:0080887","MESH:C564005","UMLS:C1838657","GARD:18415","OMIM:600081"],"synonyms":[{"name":"25-Hydroxyvitamin D3 deficiency, selective","type":"related"},{"name":"CYP2R1 vitamin D-dependent rickets, type 1","type":"exact"},{"name":"Pseudovitamin D3 deficiency rickets due to 25-Hydroxylase deficiency","type":"related"},{"name":"VDDR1B","type":"related"},{"name":"Vitam D hydroxylation-deficient rickets type 1b","type":"exact"},{"name":"rickets due to defect in vitamin D 25-hydroxylation deficiency","type":"exact"},{"name":"vitamin D 25-Hydroxylase deficiency","type":"exact"},{"name":"vitamin D hydroxylation-deficient rickets type 1b","type":"exact"},{"name":"vitamin D hydroxylation-deficient rickets, type 1B","type":"exact"},{"name":"vitamin D-dependent rickets, type 1 caused by mutation in CYP2R1","type":"exact"},{"name":"vitamin D-dependent rickets, type 1B","type":"related"}],"termid":"MONDO:0010810","xrefs":{"Monarch":{"xref_id":"0010810"}}}


id: PBO:0053918
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1215","termid":"PBO:0053918"}


id: PBO:0069884
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1172, pseudogene","termid":"PBO:0069884"}


id: GO:0061653
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Isoenergetic transfer of ISG15 from one protein to another via the reaction X-ISG15 + Y = Y-ISG15 + X, where both the X-ISG15 and Y-ISG15 linkages are thioester bonds between the C-terminal amino acid of ISG15 and a sulfhydryl side group of a cysteine residue.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ISG15 transferase activity","termid":"GO:0042296"},{"relation_name":"is_a","term_name":"ubiquitin-like protein conjugating enzyme activity","termid":"GO:0061650"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019787"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0016746","GO:0019787","GO:0016740","GO:0140096","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"ISG15 conjugating enzyme activity","synonyms":[{"name":"E2","type":"broad"}],"termid":"GO:0061653"}


id: PBO:0031537
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-constitutive_catalytic_activity","termid":"PBO:0031537"}


id: PBO:0004609
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase Dbp2","termid":"PBO:0004609"}


id: GO:0120254
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving an olefinic compound, any compound which contains a carbon-carbon double bond (aka C=C).","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic process","termid":"GO:0008152"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"olefinic compound metabolic process","synonyms":[{"name":"alkene substituted compound metabolic process","type":"exact"},{"name":"alkene substituted compound metabolism","type":"exact"}],"termid":"GO:0120254"}


id: MONDO:0001849
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"disease of orbital part of eye adnexa","termid":"MONDO:0004751"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chronic orbital inflammation","secondary_identifiers":["ICD9:376.1","SCTID:44729001","UMLS:C0155261","DOID:1397","MEDGEN:509880","ICD9:376.10"],"synonyms":[{"name":"chronic inflammation of orbit","type":"exact"}],"termid":"MONDO:0001849","xrefs":{"Monarch":{"xref_id":"0001849"}}}


id: GO:0072047
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regionalization process in which specific areas of cell differentiation are determined along a proximal/distal axis of a nephron. The proximal/distal axis is defined by a line that runs from the center of the kidney (proximal end) outward (distal end).","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proximal/distal pattern formation","termid":"GO:0009954"},{"relation_name":"is_a","term_name":"pattern specification involved in kidney development","termid":"GO:0061004"},{"relation_name":"part_of","term_name":"nephron development","termid":"GO:0072006"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"proximal/distal pattern formation involved in nephron development","synonyms":[{"name":"proximal-distal pattern formation involved in nephron development","type":"exact"},{"name":"proximal/distal nephron patterning","type":"exact"}],"termid":"GO:0072047"}


id: FYPO:0007213
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the dimethylation of lysine at position 9 of histone H3 in one or more heterochromatin islands occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah","PMID:29214404"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased histone H3-K9 dimethylation during vegetative growth","termid":"FYPO:0000876"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0005447","FYPO:0002274","FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"decreased histone H3-K9 dimethylation at heterochromatin island during vegetative growth","synonyms":[{"name":"decreased histone H3 K9 dimethylation at heterochromatin island during vegetative growth","type":"exact"},{"name":"decreased histone H3-K9 dimethylation at heterochromatin island during mitotic cell cycle","type":"related"},{"name":"decreased histone H3K9 dimethylation at heterochromatin island during vegetative growth","type":"exact"},{"name":"decreased histone H3K9me2 at heterochromatin island during vegetative growth","type":"exact"},{"name":"decreased histone lysine H3 K9 dimethylation at heterochromatin island during vegetative growth","type":"exact"},{"name":"reduced histone H3-K9 dimethylation at heterochromatin island during vegetative growth","type":"exact"}],"termid":"FYPO:0007213"}


id: MONDO:0017731
data:
  {"annotated_genes":["SJAG_02949","SJAG_04819","SJAG_01868"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85543],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012221"},{"annotations":[85546],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012222"},{"annotations":[85843,85844],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009737"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"lysosomal storage disease","termid":"MONDO:0002561"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01868":null,"SJAG_02949":null,"SJAG_04819":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002561"}],"interesting_parent_ids":["MONDO:0002561","MONDO:0005066"],"is_obsolete":false,"name":"glycoproteinosis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["icd11.foundation:979972142","MEDGEN:1842769","GARD:10670","Orphanet:309279","UMLS:C5681075"],"termid":"MONDO:0017731","terms_by_termid":{"MONDO:0009737":null,"MONDO:0012221":null,"MONDO:0012222":null},"xrefs":{"Monarch":{"xref_id":"0017731"}}}


id: GO:0031295
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of providing, via surface-bound receptor-ligand pairs, a second, antigen-independent, signal in addition to that provided by the T cell receptor to augment T cell activation.","definition_xrefs":["ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphocyte costimulation","termid":"GO:0031294"},{"relation_name":"is_a","term_name":"positive regulation of T cell activation","termid":"GO:0050870"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"positively_regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"T cell costimulation","secondary_identifiers":["Reactome:R-HSA-388841"],"synonyms":[{"name":"T cell co-stimulation","type":"exact"},{"name":"T lymphocyte costimulation","type":"exact"},{"name":"T-cell co-stimulation","type":"exact"},{"name":"T-cell costimulation","type":"exact"},{"name":"T-lymphocyte costimulation","type":"exact"}],"termid":"GO:0031295"}


id: MONDO:1011442
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Enteropathy-associated T cell lymphoma that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-hodgkin lymphoma, non-human animal","termid":"MONDO:1010214"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"enteropathy-associated T cell lymphoma, non-human animal","secondary_identifiers":["OMIA:002526"],"termid":"MONDO:1011442","xrefs":{"Monarch":{"xref_id":"1011442"}}}


id: GO:0044203
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The fibrous, electron-dense layer lying on the nucleoplasmic side of the inner membrane of a host cell nucleus, composed of lamin filaments.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell nuclear part","termid":"GO:0044094"},{"relation_name":"part_of","term_name":"host cell nuclear inner membrane","termid":"GO:0044201"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell nuclear lamina","termid":"GO:0044203"}


id: MONDO:0027462
data:
  {"annotated_genes":["SJAG_00212"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87180],"is_not":false,"summary":null,"term":"MONDO:0027462"}]},"cv_name":"mondo","definition":"An autosomal recessive cutis laxa type II classic type characterized by cardiovascular involvement that has material basis in homozygous mutation in the ATP6V1E1 gene on chromosome 22q11.","definition_xrefs":["DOID:0070140"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"autosomal recessive cutis laxa type 2, classic type","termid":"MONDO:0009054"},{"relation_name":"is_a","term_name":"autosomal recessive cutis laxa type 2","termid":"MONDO:0019573"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00212":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0004736","MONDO:0005066"],"is_obsolete":false,"name":"autosomal recessive cutis laxa type 2C","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:617402","UMLS:C4479387","MEDGEN:1385755"],"synonyms":[{"name":"ARCL2C","type":"related"},{"name":"autosomal recessive cutis laxa type IIC","type":"related"},{"name":"cutis laxa, autosomal recessive, type 2C","type":"related"},{"name":"cutis laxa, autosomal recessive, type IIC","type":"related"}],"termid":"MONDO:0027462","terms_by_termid":{"MONDO:0027462":null},"xrefs":{"Monarch":{"xref_id":"0027462"}}}


id: PBO:0030932
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_glutamate-ammonia_ligase_activity","termid":"PBO:0030932"}


id: FYPO:0001512
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell is branched and elongated.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"branched vegetative cell","termid":"FYPO:0000015"},{"relation_name":"has_part","term_name":"elongated vegetative cell","termid":"FYPO:0001122"},{"relation_name":"is_a","term_name":"branched vegetative cell","termid":"FYPO:0000015"},{"relation_name":"is_a","term_name":"elongated vegetative cell","termid":"FYPO:0001122"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0000005"],"is_obsolete":false,"name":"branched, elongated cell","synonyms":[{"name":"branched, elongated cell during mitotic cell cycle","type":"related"},{"name":"branched, elongated cell during vegetative growth","type":"exact"},{"name":"branched, elongated vegetative cell","type":"exact"},{"name":"branched, long cell","type":"exact"}],"termid":"FYPO:0001512"}


id: PBO:0091860
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gene structure of SPNCRNA.113 used","termid":"PBO:0091860"}


id: FYPO:0003478
data:
  {"alleles_by_uniquename":{"SJAG_01330:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01330","name":"mad2delta","uniquename":"SJAG_01330:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[119989,119644],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0004318"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype that affects signal transduction. Signal transduction is the process in which a signal is conveyed to trigger a change in the activity or state of a cell. It begins with reception of a signal and ends with regulation of a downstream cellular process, e.g. regulation of transcription or regulation of a metabolic process. A phenotype may affect one or more steps in one or more signal transduction pathways.","definition_xrefs":["GO:0007165","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation phenotype","termid":"FYPO:0000145"},{"relation_name":"is_a","term_name":"cellular response phenotype","termid":"FYPO:0000298"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01330":null},"genotype_count":1,"genotypes_by_uniquename":{"mad2delta":{"display_name":"mad2delta","display_uniquename":"mad2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01330:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000298","FYPO:0000002"],"is_obsolete":false,"name":"signal transduction phenotype","references_by_uniquename":{"PMID:21802294":null,"PMID:32109380":null},"single_locus_annotated_genes":["SJAG_01330"],"single_locus_genotype_uniquenames":["mad2delta"],"synonyms":[{"name":"fission yeast signal transduction phenotype","type":"exact"}],"termid":"FYPO:0003478","terms_by_termid":{"FYECO:0000162":null,"FYPO:0004318":null}}


id: PBO:0025547
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin/metalloprotease fusion protein Udp7","termid":"PBO:0025547"}


id: PBO:0090886
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"integral mitochondrial outer membrane (MOM) protein","termid":"PBO:0090886"}


id: FYPO:0004079
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which phosphorylation of serine at position 10 of histone H3 is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal histone phosphorylation during vegetative growth","termid":"FYPO:0002595"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001312","FYPO:0000257","FYPO:0001320"],"is_obsolete":false,"name":"normal histone H3-S10 phosphorylation during vegetative growth","synonyms":[{"name":"normal histone H3 phosphorylation at S10 during vegetative growth","type":"exact"},{"name":"normal histone H3-S10 phosphorylation during mitotic cell cycle","type":"related"},{"name":"normal histone H3S10 phosphorylation during vegetative growth","type":"exact"}],"termid":"FYPO:0004079"}


id: GO:0060026
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The morphogenetic process in which an epithelium narrows along one axis and lengthens in a perpendicular axis.","definition_xrefs":["PMID:12062082","GOC:dgf","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"morphogenesis of an epithelium","termid":"GO:0002009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"convergent extension","secondary_identifiers":["Wikipedia:Convergent_extension"],"termid":"GO:0060026"}


id: GO:0005637
data:
  {"annotated_genes":["SJAG_03449","SJAG_03491","SJAG_05226","SJAG_03657","SJAG_00680","SJAG_01263","SJAG_01745","SJAG_05196"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[70763,78092,94201,103177,103771,118555],"is_not":false,"summary":null,"term":"GO:0005637"},{"annotations":[117940,76472],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990862"}]},"cv_name":"cellular_component","definition":"The inner, i.e. lumen-facing, lipid bilayer of the nuclear envelope.","definition_xrefs":["GOC:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle inner membrane","termid":"GO:0019866"},{"relation_name":"is_a","term_name":"nuclear membrane","termid":"GO:0031965"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00680":null,"SJAG_01263":null,"SJAG_01745":null,"SJAG_03449":null,"SJAG_03491":null,"SJAG_03657":null,"SJAG_05196":null,"SJAG_05226":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005575","GO:0005634"],"is_obsolete":false,"name":"nuclear inner membrane","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["NIF_Subcellular:sao1612527463"],"synonyms":[{"name":"inner envelope","type":"broad"},{"name":"inner nuclear membrane","type":"exact"},{"name":"nucleus inner membrane","type":"exact"}],"termid":"GO:0005637","terms_by_termid":{"GO:0005637":null,"GO:1990862":null}}


id: GO:0018211
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical alteration of a tryptophan residue in a peptide.","definition_xrefs":["GOC:isa_complete"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-amino acid modification","termid":"GO:0018193"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-tryptophan modification","termid":"GO:0018211"}


id: MOD:01139
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:312"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DeltaMass","termid":"MOD:00947"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dioctyl phthalate sodium adduct","termid":"MOD:01139"}


id: PBO:0035763
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_microtubule_nucleation_during_mitotic_interphase","termid":"PBO:0035763"}


id: FYPO:0003223
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which acetylation of lysine at position 9 of histone H3 is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal histone acetylation during vegetative growth","termid":"FYPO:0003221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001320","FYPO:0001312","FYPO:0000002"],"is_obsolete":false,"name":"normal histone H3-K9 acetylation during vegetative growth","synonyms":[{"name":"normal histone H3 K9 acetylation during vegetative growth","type":"exact"},{"name":"normal histone H3-K9 acetylation during mitotic cell cycle","type":"related"},{"name":"normal histone H3K9 acetylation during vegetative growth","type":"exact"},{"name":"normal histone lysine H3 K9 acetylation during vegetative growth","type":"exact"}],"termid":"FYPO:0003223"}


id: PBO:0041323
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C2orf74 antisense RNA 1","termid":"PBO:0041323"}


id: MONDO:0019936
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare otorhinolaryngological malformation (obsolete MONDO:0019936)","secondary_identifiers":["Orphanet:96333"],"termid":"MONDO:0019936","xrefs":{"Monarch":{"xref_id":"0019936"}}}


id: PBO:0030716
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_glucosyltransferase_activity","termid":"PBO:0030716"}


id: GO:2000083
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of L-ascorbic acid biosynthetic process.","definition_xrefs":["PMID:19395407"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of biosynthetic process","termid":"GO:0009890"},{"relation_name":"is_a","term_name":"negative regulation of carbohydrate metabolic process","termid":"GO:0045912"},{"relation_name":"is_a","term_name":"negative regulation of vitamin metabolic process","termid":"GO:0046137"},{"relation_name":"is_a","term_name":"regulation of L-ascorbic acid biosynthetic process","termid":"GO:2000082"},{"relation_name":"negatively_regulates","term_name":"L-ascorbic acid biosynthetic process","termid":"GO:0019853"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0005975"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006766"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0006766"},{"rel_name":"regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975","GO:0044281","GO:0006766"],"is_obsolete":false,"name":"negative regulation of L-ascorbic acid biosynthetic process","synonyms":[{"name":"negative regulation of L-ascorbic acid anabolism","type":"exact"},{"name":"negative regulation of L-ascorbic acid biosynthesis","type":"exact"},{"name":"negative regulation of L-ascorbic acid formation","type":"exact"},{"name":"negative regulation of L-ascorbic acid synthesis","type":"exact"},{"name":"negative regulation of ascorbate biosynthesis","type":"exact"},{"name":"negative regulation of ascorbate biosynthetic process","type":"exact"},{"name":"negative regulation of vitamin C biosynthesis","type":"exact"},{"name":"negative regulation of vitamin C biosynthetic process","type":"exact"}],"termid":"GO:2000083"}


id: PBO:0055797
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lipoprotein(a) like 1","termid":"PBO:0055797"}


id: PBO:0067880
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 182","termid":"PBO:0067880"}


id: PBO:0042247
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-C motif chemokine receptor 9","termid":"PBO:0042247"}


id: PBO:0050367
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 70","termid":"PBO:0050367"}


id: PBO:0011124
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Warsaw breakage syndrome","termid":"PBO:0011124"}


id: PBO:0068574
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 25, pseudogene","termid":"PBO:0068574"}


id: MOD:00046
data:
  {"annotated_genes":["SJAG_03012","SJAG_02763","SJAG_02592"],"annotation_feature_type":"gene","cv_annotations":{"PSI-MOD":[{"annotations":[119706,119707,119708,119709,80835,80836,119492,119493],"is_not":false,"summary":null,"term":"MOD:00046"}]},"cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-serine residue to O-phospho-L-serine.","definition_xrefs":["OMSSA:6","PubMed:4065410","PubMed:8061611","ChEBI:15811","RESID:AA0037","Unimod:21#S","DeltaMass:0","PubMed:12923550"],"direct_ancestors":[{"relation_name":"is_a","term_name":"residues isobaric at 166.98-167.00 Da","termid":"MOD:00771"},{"relation_name":"is_a","term_name":"modified L-serine residue","termid":"MOD:00916"},{"relation_name":"is_a","term_name":"O-phosphorylated residue","termid":"MOD:01455"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02592":null,"SJAG_02763":null,"SJAG_03012":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00696"}],"interesting_parent_ids":["MOD:00696"],"is_obsolete":false,"name":"O-phospho-L-serine","references_by_uniquename":{"PMID:26774782":null,"PMID:31150379":null,"PMID:36408920":null},"synonyms":[{"name":"(2S)-2-amino-3-(phosphonooxy)propanoic acid","type":"exact"},{"name":"2-amino-3-hydroxypropanoic acid 3-phosphate","type":"exact"},{"name":"2-azanyl-3-(phosphonooxy)propanoic acid","type":"exact"},{"name":"ACT_SITE Phosphoserine intermediate","type":"exact"},{"name":"MOD_RES Phosphoserine","type":"exact"},{"name":"O-phospho-L-serine","type":"exact"},{"name":"O-phosphonoserine","type":"exact"},{"name":"O-phosphorylated L-serine","type":"exact"},{"name":"O3-phosphoserine","type":"exact"},{"name":"OPSer","type":"exact"},{"name":"Phospho","type":"related"},{"name":"Phospho Seryl","type":"exact"},{"name":"Phosphorylation","type":"related"},{"name":"phosphorylations","type":"exact"},{"name":"serine phosphate ester","type":"exact"}],"termid":"MOD:00046","terms_by_termid":{"GO:0034599":null,"GO:0034605":null,"GO:0071475":null,"GO:1904547":null,"MOD:00046":null}}


id: MONDO:0011207
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"homozygous familial hypercholesterolemia","termid":"MONDO:0018328"},{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"xanthomatosis, susceptibility to","secondary_identifiers":["UMLS:C1865704","MEDGEN:356066","OMIM:602247"],"synonyms":[{"name":"xanthomatosis, susceptibility to","type":"exact"}],"termid":"MONDO:0011207","xrefs":{"Monarch":{"xref_id":"0011207"}}}


id: PBO:0117135
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SV2C antisense RNA 2","termid":"PBO:0117135"}


id: GO:1990815
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of protein localization to cell division site involved in cell separation after cytokinesis.","definition_xrefs":["PMID:25411334"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of protein localization to cell division site after cytokinesis (obsolete GO:1990815)","termid":"GO:1990815"}


id: BFO:0000055
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"realizes","termid":"BFO:0000055"}


id: PBO:0081313
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 93","termid":"PBO:0081313"}


id: MONDO:0016883
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Chromosome 1p deletion is a chromosome abnormality that occurs when there is a missing copy of the genetic material located on the short arm (p) of chromosome 1. The severity of the condition and the signs and symptoms depend on the size and location of the deletion and which genes are involved. Features that often occur in people with chromosome 1p deletion include developmental delay, intellectual disability, behavioral problems, and distinctive facial features. Most cases are not inherited, but people can pass the deletion on to their children. Treatment is based on the signs and symptoms present in each person.","definition_xrefs":["GARD:0003730"],"direct_ancestors":[{"relation_name":"is_a","term_name":"partial deletion of chromosome 1","termid":"MONDO:0016866"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"partial deletion of the short arm of chromosome 1","secondary_identifiers":["MESH:C535591","NCIT:C36501","UMLS:C0795796","MEDGEN:208633","icd11.foundation:1004815242","Orphanet:261857","GARD:3730"],"synonyms":[{"name":"1p deletion","type":"related"},{"name":"1p monosomy","type":"related"},{"name":"chromosome 1p deletion","type":"related"},{"name":"del(1p)","type":"related"},{"name":"deletion 1p","type":"related"},{"name":"loss of chromosome 1p","type":"related"},{"name":"monosomy 1p","type":"related"},{"name":"partial deletion of chromosome 1p","type":"exact"},{"name":"partial deletion of the short arm of chromosome type 1","type":"exact"},{"name":"partial monosomy 1p","type":"related"},{"name":"partial monosomy of chromosome 1p","type":"exact"},{"name":"partial monosomy of the short arm of chromosome 1","type":"exact"}],"termid":"MONDO:0016883","xrefs":{"Monarch":{"xref_id":"0016883"}}}


id: MONDO:0012260
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A cataract that has material basis in variation in the region 19q13.","definition_xrefs":["PMID:15671291","DOID:0110261"],"direct_ancestors":[{"relation_name":"is_a","term_name":"early-onset nuclear cataract","termid":"MONDO:0020376"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"cataract 35","secondary_identifiers":["MESH:C563728","UMLS:C1836272","MEDGEN:373050","GARD:9492","OMIM:609376"],"synonyms":[{"name":"CATCN1","type":"exact"},{"name":"CTRCT35","type":"exact"},{"name":"autosomal recessive congenital nuclear cataract 1","type":"exact"},{"name":"cataract 35","type":"exact"},{"name":"cataract 35, congenital nuclear","type":"exact"},{"name":"cataract type 35","type":"exact"},{"name":"cataract, congenital nuclear, autosomal recessive 1","type":"related"}],"termid":"MONDO:0012260","xrefs":{"Monarch":{"xref_id":"0012260"}}}


id: GO:0030166
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of proteoglycans, any glycoprotein in which the carbohydrate units are glycosaminoglycans.","definition_xrefs":["PMID:35536939"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proteoglycan metabolic process","termid":"GO:0006029"},{"relation_name":"is_a","term_name":"glycoprotein biosynthetic process","termid":"GO:0009101"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"proteoglycan biosynthetic process","synonyms":[{"name":"proteoglycan anabolism","type":"exact"},{"name":"proteoglycan biosynthesis","type":"exact"},{"name":"proteoglycan formation","type":"exact"},{"name":"proteoglycan synthesis","type":"exact"}],"termid":"GO:0030166"}


id: PBO:0084076
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTP binding protein (mammalian Ranp homolog); involved in the maintenance of nuclear organization, RNA processing and transport; interacts with Kap121p, Kap123p and Pdr6p (karyophilin betas); not required for viability; protein abundance increases in response to DNA replication stress; GSP2 has a paralog, GSP1, that arose from the whole genome duplication","termid":"PBO:0084076"}


id: MONDO:0008799
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Anophthalmia-esophageal atresia syndrome belongs to the group of syndromic microphthalmias and is characterized by the association of uni- or bilateral anophthalmia or microphthalmia, and esophageal atresia with or without trachoesophageal fistula.","definition_xrefs":["Orphanet:77298"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-variable intellectual disability syndrome","termid":"MONDO:0015160"},{"relation_name":"is_a","term_name":"syndromic microphthalmia","termid":"MONDO:0016073"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"anophthalmia/microphthalmia-esophageal atresia syndrome","secondary_identifiers":["MEDGEN:347232","GARD:1443","ICD9:758.5","SCTID:698851003","UMLS:C1859773","DOID:0111801","OMIM:206900"],"synonyms":[{"name":"Aeg syndrome","type":"related"},{"name":"MCOPS3","type":"exact"},{"name":"SOX2 anophthalmia syndrome","type":"related"},{"name":"SOX2-related eye disorders","type":"related"},{"name":"anophthalmia clinical with associated anomalies","type":"related"},{"name":"anophthalmia esophageal genital syndrome","type":"related"},{"name":"anophthalmia microphthalmia esophageal atresia","type":"related"},{"name":"anophthalmia, clinical, with associated anomalies","type":"related"},{"name":"anophthalmia-esophageal-genital syndrome","type":"related"},{"name":"anophthalmia/microphthalmia-esophageal atresia syndrome","type":"exact"},{"name":"microphthalmia and esophageal atresia syndrome","type":"related"},{"name":"microphthalmia, syndromic 3","type":"related"},{"name":"microphthalmia, syndromic type 3","type":"exact"},{"name":"optic nerve hypoplasia and abnormalities of the central nervous system","type":"related"},{"name":"syndromic microphthalmia type 3","type":"exact"},{"name":"syndromic microphthalmia, type 3","type":"related"}],"termid":"MONDO:0008799","xrefs":{"Monarch":{"xref_id":"0008799"}}}


id: GO:0061844
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An immune response against microbes mediated by anti-microbial peptides in body fluid.","definition_xrefs":["PMID:15761415","PMID:24287494"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antimicrobial humoral response","termid":"GO:0019730"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"antimicrobial humoral immune response mediated by antimicrobial peptide","synonyms":[{"name":"antimicrobial peptide-mediated antimicrobial humoral response","type":"exact"},{"name":"peptide-mediated antimicrobial humoral response","type":"broad"}],"termid":"GO:0061844"}


id: PBO:0036138
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_localization_to_kinetochore_during_mitosis","termid":"PBO:0036138"}


id: RO:HOM0000025
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"1:many orthology that involves a gene in species A and one of its ortholog in species B, when duplications more recent than the species split have occurred in species B but not in species A.","direct_ancestors":[{"relation_name":"is_a","term_name":"in_1_to_many_orthology_relationship_with","termid":"RO:HOM0000034"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"in_pro-orthology_relationship_with","synonyms":[{"name":"pro-orthologous to","type":"exact"}],"termid":"RO:HOM0000025"}


id: MOD:01119
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to S-geranylgeranyl-L-cysteine methyl ester.","definition_xrefs":["PubMed:1483450","RESID:AA0105#var","RESID:AA0104#var","PubMed:15609361"],"direct_ancestors":[{"relation_name":"has_functional_parent","term_name":"S-geranylgeranyl-L-cysteine","termid":"MOD:00113"},{"relation_name":"has_functional_parent","term_name":"L-cysteine methyl ester","termid":"MOD:00114"},{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"S-geranylgeranyl-L-cysteine methyl ester","synonyms":[{"name":"SGergerOMeCys","type":"exact"}],"termid":"MOD:01119"}


id: MONDO:0019301
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete metabolic disease with skin involvement (obsolete MONDO:0019301)","secondary_identifiers":["Orphanet:79387"],"termid":"MONDO:0019301","xrefs":{"Monarch":{"xref_id":"0019301"}}}


id: _global:disconnected_from
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"X is disconnected_from Y iff it is not the case that X overlaps Y.","definition_xrefs":["PMID:20226267"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"disconnected_from","termid":"_global:disconnected_from"}


id: PBO:0077448
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 181","termid":"PBO:0077448"}


id: PBO:0031695
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_nuclear_import","termid":"PBO:0031695"}


id: FYPO:0003013
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which contractile ring disassembly is abnormal. Contractile ring disassembly is the part of cytokinesis in which the actomyosin contractile ring is disaggregated into its constituent components.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cytokinesis","termid":"FYPO:0000032"},{"relation_name":"is_a","term_name":"abnormal actomyosin contractile ring organization","termid":"FYPO:0004738"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0004803"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0004803","FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0000032","FYPO:0001985"],"is_obsolete":false,"name":"abnormal actomyosin contractile ring disassembly","synonyms":[{"name":"abnormal actomyosin contractile ring disassembly during mitotic cell cycle","type":"related"},{"name":"abnormal actomyosin contractile ring disassembly during vegetative growth","type":"exact"},{"name":"abnormal contractile ring disassembly","type":"exact"},{"name":"abnormal cytokinesis, actomyosin contractile ring disassembly","type":"exact"},{"name":"abnormal cytokinetic contractile ring disassembly","type":"exact"},{"name":"abnormal cytokinetic ring disassembly","type":"related"},{"name":"abnormal mitotic actomyosin contractile ring disassembly","type":"exact"},{"name":"abnormal mitotic contractile ring disassembly","type":"exact"}],"termid":"FYPO:0003013"}


id: PBO:0044818
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defensin beta 109A (pseudogene)","termid":"PBO:0044818"}


id: GO:0010167
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a nitrate stimulus.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to nitrate","termid":"GO:0010167"}


id: PBO:0077672
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TNF receptor superfamily member 18","termid":"PBO:0077672"}


id: PBO:0042205
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin H pseudogene 1","termid":"PBO:0042205"}


id: PATO:0000741
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000741 high enzyme function value (obsolete PATO:0000741)","termid":"PATO:0000741"}


id: PBO:0046057
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 3 subunit H","termid":"PBO:0046057"}


id: MONDO:0020118
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete dense granule disease (obsolete MONDO:0020118)","secondary_identifiers":["icd11.foundation:1930060978","Orphanet:98456"],"synonyms":[{"name":"Delta granule disease","type":"exact"}],"termid":"MONDO:0020118","xrefs":{"Monarch":{"xref_id":"0020118"}}}


id: MONDO:0012785
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited hypertrophic pyloric stenosis","termid":"MONDO:0100239"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"pyloric stenosis, infantile hypertrophic, 3","secondary_identifiers":["MEDGEN:383144","MESH:C567435","OMIM:612017","UMLS:C2677588"],"synonyms":[{"name":"IHPS3","type":"exact"},{"name":"pyloric stenosis, infantile hypertrophic, 3","type":"exact"}],"termid":"MONDO:0012785","xrefs":{"Monarch":{"xref_id":"0012785"}}}


id: PBO:0055406
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2836","termid":"PBO:0055406"}


id: GO:0035724
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of CD24, a CD marker and cell adhesion molecule that occurs on many B-lineage cells and mature granulocytes, and is involved in B cell activation and differentiation as well as T cell co-stimulation.","definition_xrefs":["GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete CD24 biosynthetic process (obsolete GO:0035724)","synonyms":[{"name":"CD24 anabolism","type":"exact"},{"name":"CD24 biosynthesis","type":"exact"},{"name":"CD24 formation","type":"exact"},{"name":"CD24 synthesis","type":"exact"}],"termid":"GO:0035724"}


id: GO:0106028
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The organization process which results in the disassembly (either partial or complete) of constituent parts of a neuron projection. A neuron projection is a prolongation or process extending from a nerve cell, e.g. an axon or dendrite.","definition_xrefs":["GOC:bc","GOC:aruk","PMID:11585923"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron projection organization","termid":"GO:0106027"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuron projection retraction","synonyms":[{"name":"neuron projection disassembly","type":"exact"}],"termid":"GO:0106028"}


id: PBO:0064409
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PNMA family member 5","termid":"PBO:0064409"}


id: RO:0002326
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"capable_of_part_of","termid":"RO:0002216"},{"relation_name":"is_a","term_name":"part_of_structure_that_is_capable_of","termid":"RO:0002329"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"contributes_to","termid":"RO:0002326"}


id: PBO:0002863
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA snR38 (predicted)","termid":"PBO:0002863"}


id: PBO:0065731
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PWWP domain containing 3A, DNA repair factor","termid":"PBO:0065731"}


id: FYPO:0008184
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the processome is decreased.","direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization during vegetative growth","termid":"FYPO:0000443"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0000138","FYPO:0000002"],"is_obsolete":false,"name":"decreased protein localization to processome","termid":"FYPO:0008184"}


id: PBO:0056173
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"maelstrom spermatogenic transposon silencer","termid":"PBO:0056173"}


id: PBO:0117096
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PTPRC antisense RNA 1","termid":"PBO:0117096"}


id: PR:P08090
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mei3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P08090"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"21 kDa protein inducing meiosis and sporulation (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC119.04","synonyms":[{"name":"Spom972h-mei3","type":"exact"}],"termid":"PR:P08090"}


id: PBO:0051700
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol polyphosphate-4-phosphatase type II B","termid":"PBO:0051700"}


id: PBO:0044293
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CXXC finger protein 1 pseudogene 1","termid":"PBO:0044293"}


id: PBO:0113740
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"makorin ring finger protein 10, pseudogene","termid":"PBO:0113740"}


id: PBO:0074068
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 43","termid":"PBO:0074068"}


id: GO:2000679
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of transcription regulatory region DNA binding.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of DNA binding","termid":"GO:0043388"},{"relation_name":"is_a","term_name":"regulation of transcription regulatory region DNA binding","termid":"GO:2000677"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of transcription regulatory region DNA binding","termid":"GO:2000679"}


id: MONDO:0018305
data:
  {"annotated_genes":["SJAG_04743"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86432],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010600"}]},"cv_name":"mondo","definition":"Chronic granulomatous disease (CGD) is a rare primary immunodeficiency, mainly affecting phagocytes, which is characterized by an increased susceptibility to severe and recurrent bacterial and fungal infections, along with the development of granulomas.","definition_xrefs":["Orphanet:379"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"inflammatory bowel disease","termid":"MONDO:0005265"},{"relation_name":"excluded_subClassOf","term_name":"functional neutrophil defect","termid":"MONDO:0015978"},{"relation_name":"is_a","term_name":"phagocyte bactericidal dysfunction","termid":"MONDO:0005910"},{"relation_name":"is_a","term_name":"inflammatory disease","termid":"MONDO:0021166"},{"relation_name":"is_a","term_name":"defective phagocytic cell engulfment","termid":"MONDO:0024626"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04743":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"chronic granulomatous disease","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NCIT:C26788","NANDO:2200757","DOID:3265","MedDRA:10008906","OMIMPS:306400","GARD:6100","MEDGEN:5377","icd11.foundation:1329764681","MESH:D006105","NORD:968","SCTID:387759001","UMLS:C0018203","NANDO:1200357"],"synonyms":[{"name":"Bridges-Good syndrome","type":"exact"},{"name":"CGD","type":"exact"},{"name":"Quie syndrome","type":"exact"},{"name":"chronic septic granulomatosis","type":"exact"},{"name":"congenital dysphagocytosis","type":"exact"},{"name":"granulomatous disease, chronic","type":"related"}],"termid":"MONDO:0018305","terms_by_termid":{"MONDO:0010600":null},"xrefs":{"Monarch":{"xref_id":"0018305"}}}


id: GO:0018428
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The incorporation of copper into a copper-sulfur cluster.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"copper incorporation into metallo-sulfur cluster","termid":"GO:0018427"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"copper incorporation into copper-sulfur cluster","synonyms":[{"name":"copper incorporation into copper-sulphur cluster","type":"exact"}],"termid":"GO:0018428"}


id: GO:0031987
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Self-propelled movement of a cell or organism from one location to another in a behavioral context; the aspect of locomotory behavior having to do with movement.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"locomotion","termid":"GO:0040011"},{"relation_name":"part_of","term_name":"locomotory behavior","termid":"GO:0007626"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"locomotion involved in locomotory behavior","synonyms":[{"name":"locomotion during locomotory behaviour","type":"exact"}],"termid":"GO:0031987"}


id: GO:0015965
data:
  {"annotated_genes":["SJAG_01352"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97363],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015966"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving diadenosine tetraphosphate, a derivative of the nucleoside adenosine with four phosphate groups attached.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diadenosine polyphosphate metabolic process","termid":"GO:0015959"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01352":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"diadenosine tetraphosphate metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"diadenosine tetraphosphate metabolism","type":"exact"}],"termid":"GO:0015965","terms_by_termid":{"GO:0015966":null}}


id: MONDO:0024498
data:
  {"annotated_genes":["SJAG_04362"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87637],"is_not":false,"summary":null,"term":"MONDO:0024498"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"glioma susceptibility","termid":"MONDO:0100242"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04362":null},"genotype_count":0,"is_obsolete":false,"name":"glioma susceptibility 1","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:413414","OMIM:137800","UMLS:C2750850"],"synonyms":[{"name":"GLM1","type":"exact"},{"name":"astrocytoma","type":"related"},{"name":"ependymoma","type":"related"},{"name":"glioblastoma multiforme","type":"related"},{"name":"glioblastoma, somatic","type":"exact"},{"name":"glioma of brain, familial","type":"related"},{"name":"glioma susceptibility 1","type":"exact"},{"name":"glioma susceptibility 1, autosomal dominant, somatic mutation","type":"exact"},{"name":"glioma, susceptibility to, somatic","type":"exact"},{"name":"oligodendroglioma","type":"related"},{"name":"subependymoma","type":"related"}],"termid":"MONDO:0024498","terms_by_termid":{"MONDO:0024498":null},"xrefs":{"Monarch":{"xref_id":"0024498"}}}


id: PBO:0041964
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 7","termid":"PBO:0041964"}


id: PBO:0069372
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 632, pseudogene","termid":"PBO:0069372"}


id: GO:1904239
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of VCP-NPL4-UFD1 AAA ATPase complex assembly.","definition_xrefs":["GOC:PARL","GO_REF:0000058","GOC:bf","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein-containing complex assembly","termid":"GO:0043254"},{"relation_name":"regulates","term_name":"VCP-NPL4-UFD1 AAA ATPase complex assembly","termid":"GO:1904210"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0065003","GO:0044085"],"is_obsolete":false,"name":"regulation of VCP-NPL4-UFD1 AAA ATPase complex assembly","synonyms":[{"name":"regulation of Cdc48p-Npl4p-Ufd1p AAA ATPase complex assembly","type":"narrow"},{"name":"regulation of Cdc48p-Npl4p-Ufd1p AAA ATPase complex formation","type":"narrow"},{"name":"regulation of VCP-NPL4-UFD1 AAA ATPase complex formation","type":"exact"},{"name":"regulation of p97-Ufd1-Npl4 complex assembly","type":"exact"},{"name":"regulation of p97-Ufd1-Npl4 complex formation","type":"exact"}],"termid":"GO:1904239"}


id: PBO:0081382
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF222 divergent transcript","termid":"PBO:0081382"}


id: PR:Q9HDZ7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A WD repeat domain phosphoinositide-interacting protein 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01297","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy-related protein 18 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC589.07c","secondary_identifiers":["UniProtKB:Q9HDZ7"],"synonyms":[{"name":"Spom972h-WIPI2","type":"exact"}],"termid":"PR:Q9HDZ7"}


id: PBO:0035941
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-long_cytoplasmic_microtubules_during_mitotic_interphase","termid":"PBO:0035941"}


id: PBO:0077593
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane serine protease 4","termid":"PBO:0077593"}


id: PBO:0058797
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 7703","termid":"PBO:0058797"}


id: GO:0072170
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of a metanephric tubule over time, from its initial formation to the mature structure. A metanephric tubule is an epithelial tube that is part of the metanephros.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tube development","termid":"GO:0035295"},{"relation_name":"is_a","term_name":"metanephric epithelium development","termid":"GO:0072207"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric tubule development","termid":"GO:0072170"}


id: PBO:0087730
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the SF3a splicing factor complex; required for spliceosome assembly; acts after the formation of the U1 snRNP-pre-mRNA complex","termid":"PBO:0087730"}


id: MONDO:0020741
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"pyridoxine-dependent epilepsy","termid":"MONDO:0009945"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005027","MONDO:0005066"],"is_obsolete":false,"name":"pyridoxine-dependent epilepsy caused by ALDH7A1 mutant","secondary_identifiers":["OMIM:266100","DOID:0070519"],"synonyms":[{"name":"AASA dehydrogenase deficiency","type":"related"},{"name":"EPD","type":"related"},{"name":"Epd","type":"related"},{"name":"epilepsy, pyridoxine-dependent","type":"related"},{"name":"pyridoxine dependency with seizures","type":"related"},{"name":"pyridoxine-dependent epilepsy","type":"related"},{"name":"pyridoxine-dependent epilepsy caused by ALDH7A1 mutant","type":"exact"}],"termid":"MONDO:0020741","xrefs":{"Monarch":{"xref_id":"0020741"}}}


id: PBO:0052248
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium channel tetramerization domain containing 17","termid":"PBO:0052248"}


id: GO:0035024
data:
  {"annotated_genes":["SJAG_04462"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[71958],"is_not":false,"summary":null,"term":"GO:0035024"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of Rho protein signal transduction.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of Rho protein signal transduction","termid":"GO:0035023"},{"relation_name":"is_a","term_name":"negative regulation of small GTPase mediated signal transduction","termid":"GO:0051058"},{"relation_name":"negatively_regulates","term_name":"Rho protein signal transduction","termid":"GO:0007266"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04462":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of Rho protein signal transduction","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"down regulation of Rho protein signal transduction","type":"exact"},{"name":"down-regulation of Rho protein signal transduction","type":"exact"},{"name":"downregulation of Rho protein signal transduction","type":"exact"},{"name":"inhibition of Rho protein signal transduction","type":"narrow"}],"termid":"GO:0035024","terms_by_termid":{"GO:0035024":null}}


id: PBO:0030838
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_adenine_import","termid":"PBO:0030838"}


id: PBO:0040503
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aurora kinase C","termid":"PBO:0040503"}


id: PBO:0034741
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exon junction complex subunit, RNA-binding protein Rbm8","termid":"PBO:0034741"}


id: PBO:0042692
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDH13 antisense oligodendrocyte and neuron associated lncRNA","termid":"PBO:0042692"}


id: PBO:0017582
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Fission yeast Syntaxin homolog required for Vacuolar protein transport","termid":"PBO:0017582"}


id: MONDO:0009182
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Junctional epidermolysis bullosa, Herlitz-type is a severe subtype of junctional epidermolysis bullosa (JEB) characterized by blisters and extensive erosions, localized to the skin and mucous membranes.","definition_xrefs":["Orphanet:79404"],"direct_ancestors":[{"relation_name":"is_a","term_name":"junctional epidermolysis bullosa","termid":"MONDO:0017612"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"junctional epidermolysis bullosa Herlitz type","secondary_identifiers":["OMIM:226700","NANDO:1201065","MEDGEN:36328","NANDO:2201378","GARD:2153","NANDO:2200119","DOID:0060737","SCTID:400140006","UMLS:C0079683"],"synonyms":[{"name":"Herlitz type epidermolysis bullosa junctionalis","type":"exact"},{"name":"Herlitz-Pearson type epidermolysis bullosa","type":"related"},{"name":"Herlitz-Pearson-type epidermolysis bullosa","type":"exact"},{"name":"JEB, generalised severe","type":"exact"},{"name":"JEB, generalized severe","type":"exact"},{"name":"JEB-H","type":"exact"},{"name":"JEB-Herlitz type","type":"exact"},{"name":"epidermolysis bullosa Junctionalis, Herlitz type","type":"related"},{"name":"epidermolysis bullosa letalis","type":"exact"},{"name":"epidermolysis bullosa, junctional, Herlitz type","type":"related"},{"name":"epidermolysis bullosa, junctional, Herlitz-Pearson type","type":"related"},{"name":"junctional epidermolysis bullosa generalisata gravis","type":"exact"},{"name":"junctional epidermolysis bullosa, Herlitz type","type":"related"},{"name":"junctional epidermolysis bullosa, Herlitz-Pearson type","type":"exact"},{"name":"junctional epidermolysis bullosa, generalised severe","type":"related"},{"name":"junctional epidermolysis bullosa, generalized severe","type":"related"}],"termid":"MONDO:0009182","xrefs":{"Monarch":{"xref_id":"0009182"}}}


id: GO:0086098
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An angiotensin receptor signaling pathway which contributes to a circulatory system process carried out by the heart.","definition_xrefs":["GOC:BHF","GOC:mtg_cardiac_conduct_nov11","PMID:17376402"],"direct_ancestors":[{"relation_name":"is_a","term_name":"angiotensin-activated signaling pathway","termid":"GO:0038166"},{"relation_name":"is_a","term_name":"G protein-coupled receptor signaling pathway involved in heart process","termid":"GO:0086103"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"angiotensin-activated signaling pathway involved in heart process","synonyms":[{"name":"angiotensin receptor signaling pathway involved in heart process","type":"exact"},{"name":"angiotensin receptor signalling pathway involved in heart process","type":"exact"},{"name":"angiotensin-mediated signaling pathway involved in heart process","type":"related"}],"termid":"GO:0086098"}


id: GO:0090140
data:
  {"annotated_genes":["SJAG_04203","SJAG_01212"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[116686],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090258"},{"annotations":[109259],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090141"}]},"cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of mitochondrial fission. Mitochondrial fission is the division of a mitochondrion within a cell to form two or more separate mitochondrial compartments.","definition_xrefs":["GOC:ascb_2009","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mitochondrion organization","termid":"GO:0010821"},{"relation_name":"is_a","term_name":"regulation of anatomical structure morphogenesis","termid":"GO:0022603"},{"relation_name":"regulates","term_name":"mitochondrial fission","termid":"GO:0000266"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01212":null,"SJAG_04203":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007005"}],"interesting_parent_ids":["GO:0008150","GO:0007005"],"is_obsolete":false,"name":"regulation of mitochondrial fission","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of mitochondrial division","type":"exact"}],"termid":"GO:0090140","terms_by_termid":{"GO:0090141":null,"GO:0090258":null}}


id: PBO:0068354
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 135","termid":"PBO:0068354"}


id: PBO:0004787
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PWWP domain protein (predicted)","termid":"PBO:0004787"}


id: MONDO:0024507
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"isolated aniridia","termid":"MONDO:0007119"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"aniridia 1","secondary_identifiers":["OMIM:106210","MEDGEN:576337","DOID:0070532","SCTID:253231007","UMLS:C0344542"],"synonyms":[{"name":"AN1","type":"exact"},{"name":"aniridia","type":"broad"},{"name":"aniridia 1","type":"exact"},{"name":"aniridia II","type":"related"},{"name":"aniridia II, formerly","type":"related"},{"name":"cataract with late-onset corneal dystrophy","type":"exact"},{"name":"cataract, congenital, with late-onset corneal dystrophy","type":"related"}],"termid":"MONDO:0024507","xrefs":{"Monarch":{"xref_id":"0024507"}}}


id: PBO:0004306
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hira protein Slm9","termid":"PBO:0004306"}


id: PR:O74983
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A ubiquitin-conjugating enzyme E2 variant 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04653","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-conjugating enzyme spm2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC338.05c","secondary_identifiers":["UniProtKB:O74983"],"synonyms":[{"name":"Spom972h-UBE2V1","type":"exact"},{"name":"UEV MMS2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ubiquitin-conjugating enzyme variant MMS2 homolog (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74983"}


id: PBO:0088159
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Voltage-gated high-affinity calcium channel; involved in calcium influx in response to some environmental stresses as well as exposure to mating pheromones; interacts and partially co-localizes with Mid1p; however, evidence suggests CCH1 is not required for Mid1p function","termid":"PBO:0088159"}


id: GO:0016176
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and increases the activity of the enzyme superoxide-generating NADPH oxidase.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme activator activity","termid":"GO:0008047"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0140677"}],"interesting_parent_ids":["GO:0140677","GO:0030234","GO:0098772","GO:0003674"],"is_obsolete":false,"name":"superoxide-generating NADPH oxidase activator activity","synonyms":[{"name":"neutrophil cytosol factor 2","type":"narrow"}],"termid":"GO:0016176"}


id: PR:P47943
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC1006.07 gene.","definition_xrefs":["UniProtKB:P47943","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase eIF4A (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1006.07","synonyms":[{"name":"Spom972h-SPAC1006.07","type":"exact"},{"name":"eIF-4A (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"eukaryotic initiation factor 4A (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"translation initiation factor 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P47943"}


id: PR:O74738
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- set10 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74738"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal lysine N-methyltransferase set10 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1709.13c","synonyms":[{"name":"SET domain-containing protein 10 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-set10","type":"exact"}],"termid":"PR:O74738"}


id: MONDO:0015017
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any anterior segment dysgenesis in which the cause of the disease is a mutation in the CPAMD8 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anterior segment dysgenesis","termid":"MONDO:0019503"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"anterior segment dysgenesis 8","secondary_identifiers":["OMIM:617319","GARD:17954","DOID:0080613","Orphanet:519388","UMLS:C4310622","MEDGEN:934589"],"synonyms":[{"name":"ASGD8","type":"exact"},{"name":"CPAMD8 anterior segment dysgenesis","type":"exact"},{"name":"CPAMD8-related anterior segment dysgenesis","type":"exact"},{"name":"anterior segment dysgenesis 8","type":"exact"},{"name":"anterior segment dysgenesis caused by mutation in CPAMD8","type":"exact"},{"name":"anterior segment dysgenesis type 8","type":"exact"}],"termid":"MONDO:0015017","xrefs":{"Monarch":{"xref_id":"0015017"}}}


id: MONDO:0005813
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplastic proliferation of spindle to ovoid cells which show phenotypic features similar to those of interdigitating dendritic cells. The clinical course is generally aggressive. (WHO, 2008)","definition_xrefs":["NCIT:C9282"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dendritic cell sarcoma","termid":"MONDO:0004380"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0004992","MONDO:0005570"],"is_obsolete":false,"name":"interdigitating dendritic cell sarcoma","secondary_identifiers":["SCTID:715664005","ONCOTREE:IDCS","icd11.foundation:214592620","UMLS:C1260326","MEDGEN:266040","ICDO:9757/1","EFO:0007329","DOID:7848","MESH:D054739","icd11.foundation:2024362257","ICDO:9757/3","NANDO:2200035"],"synonyms":[{"name":"interdigitating Dendritic cell sarcoma","type":"exact"},{"name":"interdigitating Dendritic cell sarcoma/tumor","type":"exact"},{"name":"interdigitating cell sarcoma","type":"broad"},{"name":"interdigitating cell sarcoma/tumor","type":"exact"}],"termid":"MONDO:0005813","xrefs":{"Monarch":{"xref_id":"0005813"}}}


id: MONDO:0017758
data:
  {"annotated_genes":["SJAG_03447","SJAG_04425","SJAG_01199","SJAG_03712","SJAG_03362","SJAG_01616","SJAG_01466","SJAG_04042","SJAG_00835","SJAG_04459"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85942],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011790"},{"annotations":[87010],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013761"},{"annotations":[85710],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009238"},{"annotations":[85641,85640],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009353"},{"annotations":[85617,85618],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009354"},{"annotations":[86226],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009609"},{"annotations":[87046],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010184"},{"annotations":[86470],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032705"},{"annotations":[87389],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013382"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of metabolite absorption and transport","termid":"MONDO:0017757"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00835":null,"SJAG_01199":null,"SJAG_01466":null,"SJAG_01616":null,"SJAG_03362":null,"SJAG_03447":null,"SJAG_03712":null,"SJAG_04042":null,"SJAG_04425":null,"SJAG_04459":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"disorder of vitamin and non-protein cofactor absorption and transport","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1842689","icd11.foundation:1112006621","Orphanet:309827","GARD:21350","UMLS:C5681037"],"synonyms":[{"name":"disorder of vitamin and non-protein cofactor absorption and transport","type":"exact"}],"termid":"MONDO:0017758","terms_by_termid":{"MONDO:0009238":null,"MONDO:0009353":null,"MONDO:0009354":null,"MONDO:0009609":null,"MONDO:0010184":null,"MONDO:0011790":null,"MONDO:0013382":null,"MONDO:0013761":null,"MONDO:0032705":null},"xrefs":{"Monarch":{"xref_id":"0017758"}}}


id: PBO:0046191
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ELMO domain containing 2","termid":"PBO:0046191"}


id: FYPO:0007184
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a protein kinase activity is increased during mitosis.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein kinase activity","termid":"FYPO:0002700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000661","FYPO:0000707","FYPO:0001985","FYPO:0000652"],"is_obsolete":false,"name":"increased protein kinase activity during mitosis","synonyms":[{"name":"increased protein kinase activity during mitotic M phase","type":"related"},{"name":"increased protein kinase activity during mitotic nuclear division","type":"exact"}],"termid":"FYPO:0007184"}


id: FYPO:0002155
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which chromosome structure is normal (i.e. indistinguishable from wild type) at the telomeric regions. Telomere structure refers to the position, shape, arrangement and connectivity of DNA and associated proteins in the telomeric region.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal telomere morphology during vegetative growth","termid":"FYPO:0006513"},{"relation_name":"is_a","term_name":"normal telomere structure","termid":"FYPO:0006514"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000257"],"is_obsolete":false,"name":"normal telomere structure during vegetative growth","synonyms":[{"name":"normal chromosome structure at telomere during vegetative growth","type":"exact"},{"name":"normal chromosome structure at telomeric region during vegetative growth","type":"exact"},{"name":"normal telomere structure during mitotic cell cycle","type":"related"},{"name":"normal telomeric region structure during vegetative growth","type":"exact"}],"termid":"FYPO:0002155"}


id: GO:0070991
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a medium-chain 2,3-saturated fatty acyl-CoA + H+ + oxidized [electron-transfer flavoprotein] = a medium-chain trans-(2E)-enoyl-CoA + reduced [electron-transfer flavoprotein]. A medium-chain fatty acid has an aliphatic tail containing 6 to 12 carbons.","definition_xrefs":["RHEA:14477"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyl-CoA dehydrogenase activity","termid":"GO:0003995"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"medium-chain fatty acyl-CoA dehydrogenase activity","secondary_identifiers":["EC:1.3.8.7","MetaCyc:RXN-11734"],"synonyms":[{"name":"MCAD activity","type":"exact"}],"termid":"GO:0070991"}


id: PBO:0039751
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"apolipoprotein O pseudogene 2","termid":"PBO:0039751"}


id: GO:1905387
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a beta-carotene stimulus.","definition_xrefs":["GO_REF:0000071","GOC:TermGenie","PMID:16771696"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to lipid","termid":"GO:0033993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to beta-carotene","synonyms":[{"name":"response to beta,beta-carotene","type":"exact"}],"termid":"GO:1905387"}


id: GO:0048533
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized floral cell acquires the specialized features of a sporocyte. Sporocytes are the haploid spores of angiosperms. Once formed, they undergo meiotic divisions to form microspores and megaspores.","definition_xrefs":["GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sporocyte differentiation","synonyms":[{"name":"sporocyte development","type":"narrow"},{"name":"sporocyte morphogenesis","type":"related"}],"termid":"GO:0048533"}


id: GO:0032219
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of macromolecules forming part of a cell wall that contribute to cytogamy.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell wall macromolecule catabolic process","termid":"GO:0016998"},{"relation_name":"part_of","term_name":"cytogamy","termid":"GO:0000755"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0000747"},{"rel_name":"part_of","termid":"GO:0071554"}],"interesting_parent_ids":["GO:0071554","GO:0008150","GO:0000747"],"is_obsolete":false,"name":"cell wall macromolecule catabolic process involved in cytogamy","synonyms":[{"name":"cell wall macromolecule catabolic process during cytogamy","type":"related"}],"termid":"GO:0032219"}


id: GO:0021944
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The changes in adhesion between a neuronal cell and a glial cell as a component of the process of hindbrain glial-mediated radial cell migration.","definition_xrefs":["GOC:dph","GOC:jid","PMID:15157725","GOC:cls","GO_REF:0000021","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell adhesion","termid":"GO:0098609"},{"relation_name":"part_of","term_name":"hindbrain radial glia guided cell migration","termid":"GO:0021932"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"neuronal-glial interaction involved in hindbrain glial-mediated radial cell migration","termid":"GO:0021944"}


id: PBO:0067159
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 211, pseudogene","termid":"PBO:0067159"}


id: FYECO:0000064
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which inositol was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ inositol","termid":"FYECO:0000064"}


id: PBO:0072332
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S26 pseudogene 18","termid":"PBO:0072332"}


id: GO:0032723
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of connective tissue growth factor production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine production","termid":"GO:0001819"},{"relation_name":"is_a","term_name":"regulation of connective tissue growth factor production","termid":"GO:0032643"},{"relation_name":"positively_regulates","term_name":"connective tissue growth factor production","termid":"GO:0032601"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of connective tissue growth factor production","secondary_identifiers":["GO:0045422"],"synonyms":[{"name":"stimulation of connective tissue growth factor production","type":"narrow"},{"name":"up regulation of connective tissue growth factor production","type":"exact"},{"name":"up-regulation of connective tissue growth factor production","type":"exact"},{"name":"upregulation of connective tissue growth factor production","type":"exact"},{"name":"activation of connective tissue growth factor production","type":"narrow"},{"name":"positive regulation of CCN2 production","type":"exact"},{"name":"positive regulation of CTGF production","type":"exact"},{"name":"positive regulation of Fisp12 production","type":"exact"},{"name":"positive regulation of Hcs24 production","type":"exact"},{"name":"positive regulation of IGFBP8 production","type":"exact"},{"name":"positive regulation of connective tissue growth factor biosynthetic process","type":"narrow"},{"name":"positive regulation of hypertrophic chondrocyte-specific gene product 24 production","type":"exact"}],"termid":"GO:0032723"}


id: GO:1903830
data:
  {"annotated_genes":["SJAG_00211","SJAG_02578","SJAG_04111","SJAG_03516","SJAG_02484","SJAG_01639"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[56949,57475,62623,117356],"is_not":false,"summary":null,"term":"GO:1903830"},{"annotations":[75861],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990616"},{"annotations":[77696],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045016"}]},"cv_name":"biological_process","definition":"The directed movement of magnesium ion across a membrane.","definition_xrefs":["GOC:TermGenie","PMID:11254124","GO_REF:0000069"],"direct_ancestors":[{"relation_name":"is_a","term_name":"magnesium ion transport","termid":"GO:0015693"},{"relation_name":"is_a","term_name":"monoatomic cation transmembrane transport","termid":"GO:0098655"},{"relation_name":"is_a","term_name":"inorganic cation transmembrane transport","termid":"GO:0098662"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00211":null,"SJAG_01639":null,"SJAG_02484":null,"SJAG_02578":null,"SJAG_03516":null,"SJAG_04111":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"magnesium ion transmembrane transport","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"termid":"GO:1903830","terms_by_termid":{"GO:0045016":null,"GO:1903830":null,"GO:1990616":null}}


id: PBO:0059184
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Morf4 family associated protein 1","termid":"PBO:0059184"}


id: MONDO:0012499
data:
  {"annotated_genes":["SJAG_01007"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87629],"is_not":false,"summary":null,"term":"MONDO:0012499"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01007":null},"genotype_count":0,"is_obsolete":false,"name":"Buruli ulcer, susceptibility to","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:610446","UMLS:C1864868","MEDGEN:355851"],"synonyms":[{"name":"BUD","type":"related"},{"name":"Buruli ulcer, susceptibility to","type":"exact"},{"name":"Mycobacterium ulcerans, susceptibility to","type":"related"}],"termid":"MONDO:0012499","terms_by_termid":{"MONDO:0012499":null},"xrefs":{"Monarch":{"xref_id":"0012499"}}}


id: PBO:0044193
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cathepsin B","termid":"PBO:0044193"}


id: PBO:0066607
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ras homolog family member V","termid":"PBO:0066607"}


id: PR:Q10408
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sro7 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10408"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1F3.03 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1F3.03","synonyms":[{"name":"Spom972h-sro7","type":"exact"}],"termid":"PR:Q10408"}


id: MONDO:0008880
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Bowen syndrome of multiple malformations","secondary_identifiers":["OMIM:211200","Orphanet:1271","UMLS:C1859404","MEDGEN:349159","MESH:C538164"],"synonyms":[{"name":"Bowen syndrome","type":"exact"},{"name":"Bowen syndrome of multiple malformations","type":"exact"}],"termid":"MONDO:0008880","xrefs":{"Monarch":{"xref_id":"0008880"}}}


id: MONDO:0024291
data:
  {"annotated_genes":["SJAG_02485"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85987],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007672"}]},"cv_name":"mondo","definition":"A non-neoplastic disorder that is the result of defects of vascular morphogenesis.","direct_ancestors":[{"relation_name":"is_a","term_name":"vascular disorder","termid":"MONDO:0005385"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02485":null},"genotype_count":0,"is_obsolete":false,"name":"vascular malformation","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NANDO:2100295","MEDGEN:56387","EFO:0006888","UMLS:C0158570","MESH:D054079"],"synonyms":[{"name":"malformation, vascular","type":"related"},{"name":"malformations, vascular","type":"related"},{"name":"vascular malformation","type":"exact"}],"termid":"MONDO:0024291","terms_by_termid":{"MONDO:0007672":null},"xrefs":{"Monarch":{"xref_id":"0024291"}}}


id: MONDO:1010324
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Microphthalmia that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of orbital region, non-human animal","termid":"MONDO:1011315"},{"relation_name":"is_a","term_name":"disorder of visual system, non-human animal","termid":"MONDO:1011316"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microphthalmia, non-human animal","secondary_identifiers":["OMIA:000649"],"termid":"MONDO:1010324","xrefs":{"Monarch":{"xref_id":"1010324"}}}


id: PBO:0079481
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"taxilin gamma","termid":"PBO:0079481"}


id: PBO:0058032
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4253","termid":"PBO:0058032"}


id: GO:1900365
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of mRNA polyadenylation.","definition_xrefs":["GOC:se","PMID:15121841","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of mRNA polyadenylation (obsolete GO:1900365)","synonyms":[{"name":"activation of cleavage and polyadenylylation specificity factor activity","type":"narrow"},{"name":"activation of mRNA polyadenylation","type":"narrow"},{"name":"activation of mRNA polyadenylylation","type":"narrow"},{"name":"positive regulation of cleavage and polyadenylylation specificity factor activity","type":"narrow"},{"name":"positive regulation of mRNA polyadenylylation","type":"exact"}],"termid":"GO:1900365"}


id: PBO:0004533
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial dynamin family GTPase Msp1","termid":"PBO:0004533"}


id: GO:0015732
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of prostaglandins into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty acid transport","termid":"GO:0015908"},{"relation_name":"is_a","term_name":"icosanoid transport","termid":"GO:0071715"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"prostaglandin transport","termid":"GO:0015732"}


id: PBO:0039979
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARL5A pseudogene 2","termid":"PBO:0039979"}


id: PBO:0081322
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 112","termid":"PBO:0081322"}


id: FYPO:0007341
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which trimethylation of lysine at position 4 of histone H3 is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal histone H3-K4 methylation during vegetative growth","termid":"FYPO:0005311"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0001320","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal histone H3-K4 trimethylation during vegetative growth","synonyms":[{"name":"normal histone H3 K4 trimethylation during vegetative growth","type":"exact"},{"name":"normal histone H3-K4 trimethylation during mitotic cell cycle","type":"related"},{"name":"normal histone H3K4me3 during vegetative growth","type":"exact"},{"name":"normal histone lysine H3 K4 trimethylation during vegetative growth","type":"exact"}],"termid":"FYPO:0007341"}


id: GO:0043050
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The contraction and relaxation movements of the pharyngeal muscle that mediate feeding in nematodes.","definition_xrefs":["PMID:2181052","GOC:cab1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eating behavior","termid":"GO:0042755"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nematode pharyngeal pumping","synonyms":[{"name":"pumping behavior","type":"related"}],"termid":"GO:0043050"}


id: GO:0098829
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Uptake of folic into the blood by absorption from the small intestine.","definition_xrefs":["GOC:hal","PMID:19762432","GOC:BHF","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intestinal absorption","termid":"GO:0050892"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"intestinal folate absorption","termid":"GO:0098829"}


id: MONDO:0958116
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"combined immunodeficiency","termid":"MONDO:0015131"},{"relation_name":"is_a","term_name":"hyper-IgE syndrome","termid":"MONDO:0018037"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"autosomal recessive combined immunodeficiency due to partial IL6ST deficiency","secondary_identifiers":["UMLS:C5925106","Orphanet:656300","MEDGEN:1863929"],"termid":"MONDO:0958116","xrefs":{"Monarch":{"xref_id":"0958116"}}}


id: PBO:0073457
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"surfactant associated 3","termid":"PBO:0073457"}


id: GO:1904385
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an angiotensin stimulus. Angiotensin is any of three physiologically active peptides (angiotensin II, III, or IV) processed from angiotensinogen.","definition_xrefs":["GOC:TermGenie","GO_REF:0000071","PMID:22982863"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to peptide hormone stimulus","termid":"GO:0071375"},{"relation_name":"is_a","term_name":"response to angiotensin","termid":"GO:1990776"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to angiotensin","termid":"GO:1904385"}


id: PBO:0004333
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial rhomboid protease (predicted)","termid":"PBO:0004333"}


id: PBO:0087218
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Scaffold protein; assists in association of proteasome core particle with regulatory particle; inhibitor of proteasome in vivo and in vitro; inhibits proteasomal ATPase activity; degraded by the mature proteasome after assembly; contains HEAT-like repeats; protein increases in abundance and relocalizes from nucleus to cytoplasm upon DNA replication stress","termid":"PBO:0087218"}


id: PBO:0012293
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome segregation impaired protein 1","termid":"PBO:0012293"}


id: PBO:0063537
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proliferation and apoptosis adaptor protein 15","termid":"PBO:0063537"}


id: MONDO:0019207
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"DEND syndrome is a very rare, generally severe form of neonatal diabetes mellitus (NDM) characterized by a triad of developmental delay, epilepsy, and neonatal diabetes.","definition_xrefs":["Orphanet:79134"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"epilepsy syndrome","termid":"MONDO:0015650"},{"relation_name":"is_a","term_name":"permanent neonatal diabetes mellitus","termid":"MONDO:0100164"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0019254"},{"rel_name":"is_a","termid":"MONDO:0005015"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0037792","MONDO:0019254","MONDO:0004335","MONDO:0005015","MONDO:0005066"],"is_obsolete":false,"name":"DEND syndrome","secondary_identifiers":["MEDGEN:929262","SCTID:721088003","GARD:16701","UMLS:C4303593","NCIT:C131845"],"synonyms":[{"name":"K ATP associated developmental delay, epilepsy and neonatal diabetes","type":"exact"},{"name":"developmental delay-epilepsy-neonatal diabetes syndrome","type":"exact"}],"termid":"MONDO:0019207","xrefs":{"Monarch":{"xref_id":"0019207"}}}


id: MONDO:1012776
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Atherosclerosis that occurs in rabbits due to a mutation in the APOE gene created by genetic engineering or gene editing.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"atherosclerosis, non-human animal","termid":"MONDO:1010008"},{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"atherosclerosis, APOE-related, rabbit","secondary_identifiers":["OMIA:002063-9986"],"synonyms":[{"name":"hyperlipidaemia/atherosclerosis, APOE-related, rabbit","type":"exact"}],"termid":"MONDO:1012776","xrefs":{"Monarch":{"xref_id":"1012776"}}}


id: GO:0034514
data:
  {"annotated_genes":["SJAG_00564"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[77936],"is_not":false,"summary":null,"term":"GO:0034514"}]},"cv_name":"biological_process","definition":"The series of molecular signals generated as a consequence of the presence of unfolded proteins in the mitochondrial matrix; results in transcriptional upregulation of nuclear genes encoding mitochondrial stress proteins.","definition_xrefs":["PMID:17849004","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to unfolded protein","termid":"GO:0034620"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00564":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mitochondrial unfolded protein response","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"mtUPR","type":"exact"}],"termid":"GO:0034514","terms_by_termid":{"GO:0034514":null}}


id: PBO:0068068
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 373","termid":"PBO:0068068"}


id: PBO:0084318
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Karyopherin; a carrier protein involved in nuclear import of proteins; importin beta homolog","termid":"PBO:0084318"}


id: PBO:0114089
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F1-FO ATP synthase peripheral stalk-membrane subunit, Atp4","termid":"PBO:0114089"}


id: PBO:0003042
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.5.4.2","termid":"PBO:0003042"}


id: PATO:0001875
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's having three angles.","definition_xrefs":["wordreference:wordreference"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-D shape","termid":"PATO:0002006"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"triangular","synonyms":[{"name":"delta shaped","type":"related"},{"name":"deltoid","type":"exact"},{"name":"triangle","type":"related"},{"name":"triangle-shaped","type":"related"}],"termid":"PATO:0001875"}


id: PR:O13809
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC17H9.12c gene.","definition_xrefs":["UniProtKB:O13809","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized FAD-binding protein C17H9.12c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17H9.12c","synonyms":[{"name":"Spom972h-SPAC17H9.12c","type":"exact"}],"termid":"PR:O13809"}


id: PBO:0043142
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"capicua transcriptional repressor pseudogene 10","termid":"PBO:0043142"}


id: MONDO:0003400
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A yolk sac tumor that occurs during childhood.","definition_xrefs":["NCIT:C27364"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malignant childhood germ cell neoplasm","termid":"MONDO:0004479"},{"relation_name":"is_a","term_name":"yolk sac tumor","termid":"MONDO:0005744"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"childhood endodermal sinus tumor","secondary_identifiers":["MEDGEN:234139","UMLS:C1333016","DOID:5342"],"synonyms":[{"name":"childhood endodermal sinus neoplasm","type":"exact"},{"name":"childhood endodermal sinus tumor","type":"exact"},{"name":"childhood yolk Sac neoplasm","type":"related"},{"name":"childhood yolk Sac tumor","type":"related"},{"name":"childhood yolk Sac tumour","type":"related"},{"name":"paediatric endodermal sinus neoplasm","type":"related"},{"name":"paediatric yolk Sac neoplasm","type":"related"},{"name":"paediatric yolk Sac tumour","type":"exact"},{"name":"pediatric endodermal sinus neoplasm","type":"related"},{"name":"pediatric yolk Sac neoplasm","type":"related"},{"name":"pediatric yolk Sac tumor","type":"exact"}],"termid":"MONDO:0003400","xrefs":{"Monarch":{"xref_id":"0003400"}}}


id: GO:0070777
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which D-aspartate, the D-enantiomer of the anion of (2R)-2-aminobutanedioic acid  is transported across a lipid bilayer, from one side of a membrane to the other, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mah","GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aspartate transmembrane transport","termid":"GO:0015810"},{"relation_name":"is_a","term_name":"D-amino acid transport","termid":"GO:0042940"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0006810","GO:0055085","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"D-aspartate transmembrane transport","termid":"GO:0070777"}


id: PBO:0005103
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Set1C PHD Finger protein Spf1","termid":"PBO:0005103"}


id: GO:0010785
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The addition of clathrin and adaptor proteins to Golgi membranes during the formation of transport vesicles that will move from the plasma membrane to the endosome, forming a vesicle coat.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"clathrin coating of Golgi vesicle","termid":"GO:0048202"},{"relation_name":"part_of","term_name":"vesicle targeting, plasma membrane to endosome","termid":"GO:0048201"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0061024"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0044085","GO:0016192","GO:0065003","GO:0061024","GO:0008150"],"is_obsolete":false,"name":"clathrin coating of Golgi vesicle, plasma membrane to endosome targeting","termid":"GO:0010785"}


id: GO:0050796
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the regulated release of insulin.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein secretion","termid":"GO:0050708"},{"relation_name":"is_a","term_name":"regulation of peptide hormone secretion","termid":"GO:0090276"},{"relation_name":"regulates","term_name":"insulin secretion","termid":"GO:0030073"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0023052"],"is_obsolete":false,"name":"regulation of insulin secretion","secondary_identifiers":["Reactome:R-HSA-422356"],"termid":"GO:0050796"}


id: PBO:0055882
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LRRC7 antisense RNA 1","termid":"PBO:0055882"}


id: MONDO:0060583
data:
  {"annotated_genes":["SJAG_02075"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85591],"is_not":false,"summary":null,"term":"MONDO:0060583"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02075":null},"genotype_count":0,"is_obsolete":false,"name":"platelet abnormalities with eosinophilia and immune-mediated inflammatory disease","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0112004","OMIM:617718","UMLS:C4540232","MEDGEN:1618052"],"synonyms":[{"name":"PLTEID","type":"related"},{"name":"immunodeficiency 71 with inflammatory disease and congenital thrombocytopenia","type":"exact"},{"name":"platelet abnormalities with eosinophilia and immune-mediated inflammatory disease","type":"exact"}],"termid":"MONDO:0060583","terms_by_termid":{"MONDO:0060583":null},"xrefs":{"Monarch":{"xref_id":"0060583"}}}


id: PBO:0060397
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NEDD4 binding protein 2 like 1","termid":"PBO:0060397"}


id: MONDO:0032571
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"spondyloepiphyseal dysplasia","termid":"MONDO:0016761"},{"relation_name":"is_a","term_name":"spondyloepimetaphyseal dysplasia","termid":"MONDO:0100510"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"spondyloepimetaphyseal dysplasia, Krakow type","secondary_identifiers":["OMIM:618162","UMLS:C4748455","MEDGEN:1648323"],"synonyms":[{"name":"Immunoosseous Dysplasia, Krakow Type","type":"related"},{"name":"SEMDK","type":"related"},{"name":"SPONDYLOEPIMETAPHYSEAL DYSPLASIA, KRAKOW TYPE","type":"related"}],"termid":"MONDO:0032571","xrefs":{"Monarch":{"xref_id":"0032571"}}}


id: PBO:0114138
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenine deaminase Dea3","termid":"PBO:0114138"}


id: FYPO:0000064
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of 2-deoxyglucose than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000003","FYPO:0002682","FYPO:0000139"],"is_obsolete":false,"name":"resistance to 2-deoxyglucose","synonyms":[{"name":"resistance to 2-DOG","type":"exact"},{"name":"resistance to 2-deoxyglucose during mitotic cell cycle","type":"related"},{"name":"resistance to 2-deoxyglucose during vegetative growth","type":"exact"},{"name":"resistant to 2-DOG","type":"exact"},{"name":"resistant to 2-deoxy-D-glucose","type":"exact"}],"termid":"FYPO:0000064"}


id: PBO:0075463
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPATA13 antisense RNA 1","termid":"PBO:0075463"}


id: PBO:0001397
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf PARP type zinc finger protein","termid":"PBO:0001397"}


id: GO:0000039
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete plasma membrane long-chain fatty acid transporter (obsolete GO:0000039)","synonyms":[{"name":"plasma membrane long-chain fatty acid transporter","type":"exact"}],"termid":"GO:0000039"}


id: PBO:0045711
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DAZ interacting zinc finger protein 1 like","termid":"PBO:0045711"}


id: GO:0120009
data:
  {"annotated_genes":["SJAG_00230","SJAG_03746","SJAG_02375","SJAG_03851","SJAG_03718","SJAG_03721","SJAG_03338","SJAG_00355","SJAG_01590","SJAG_03416","SJAG_02323","SJAG_01722","SJAG_00576","SJAG_05268","SJAG_03710","SJAG_03741","SJAG_01305","SJAG_01229","SJAG_16459","SJAG_01329","SJAG_04370","SJAG_01225","SJAG_03172"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[57501,94609,102973,108580,109740,111711,116601],"is_not":false,"summary":null,"term":"GO:0120009"},{"annotations":[116624,91265,104405,101643,89591,108018,100892,107889,97848,106220,98988,97914,109028,107113,109902],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120010"},{"annotations":[106703],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120011"}]},"cv_name":"biological_process","definition":"The transport of lipids between membranes in which a lipid molecule is transported through an aqueous phase from the outer leaflet of a donor membrane to the outer leaflet of an acceptor membrane. This process does not require metabolic energy and can be either spontaneous or mediated by lipid transfer proteins (LTPs).","definition_xrefs":["PMID:20823909","PMID:24220498","GOC:krc","PMID:25797198"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid transport","termid":"GO:0006869"},{"relation_name":"is_a","term_name":"membrane organization","termid":"GO:0061024"}],"gene_count":23,"genes_by_uniquename":{"SJAG_00230":null,"SJAG_00355":null,"SJAG_00576":null,"SJAG_01225":null,"SJAG_01229":null,"SJAG_01305":null,"SJAG_01329":null,"SJAG_01590":null,"SJAG_01722":null,"SJAG_02323":null,"SJAG_02375":null,"SJAG_03172":null,"SJAG_03338":null,"SJAG_03416":null,"SJAG_03710":null,"SJAG_03718":null,"SJAG_03721":null,"SJAG_03741":null,"SJAG_03746":null,"SJAG_03851":null,"SJAG_04370":null,"SJAG_05268":null,"SJAG_16459":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0061024","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"intermembrane lipid transfer","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"termid":"GO:0120009","terms_by_termid":{"GO:0120009":null,"GO:0120010":null,"GO:0120011":null}}


id: PBO:0064079
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 113","termid":"PBO:0064079"}


id: PBO:0061454
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear receptor subfamily 5 group A member 2","termid":"PBO:0061454"}


id: GO:0018892
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving cyclohexylsulfamate, also known as cyclamic acid. Sodium cyclohexylsulfamate (CHS-Na) was a widely used sweetening agent but was banned because of the suspicion of carcinogenicity and metabolic conversion to cyclohexylamine (CHA), a toxic substance. It is now used as a fungicide.","definition_xrefs":["UM-BBD_pathwayID:chs"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur compound metabolic process","termid":"GO:0006790"},{"relation_name":"is_a","term_name":"xenobiotic metabolic process","termid":"GO:0006805"},{"relation_name":"is_a","term_name":"oxoacid metabolic process","termid":"GO:0043436"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006790"],"is_obsolete":false,"name":"cyclohexylsulfamate metabolic process","synonyms":[{"name":"cyclohexylsulfamate metabolism","type":"exact"},{"name":"cyclohexylsulphamate metabolic process","type":"exact"},{"name":"cyclohexylsulphamate metabolism","type":"exact"}],"termid":"GO:0018892"}


id: MONDO:0023094
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Exogenous ochronosis refers tothe bluish-black discoloration of certain tissues, such as the ear cartilage, the ocular (eye) tissue, and other body locations when it is due toexposure to various substances.It has been reported most commonly with topical application of hydroquinones to the skin. The discolorationmay becaused byan effect ontyrosinase(an enzyme located in melanocytes, which are skincells that produce pigment), or by inhibiting homogentisic acid oxidase, resulting in the accumulation and deposition of homogentisic acid (HGA) in cartilage. The discoloration is often permanent, but when exogenous ochronosis is caused by topical hydroquinones, carbon dioxide lasers and dermabrasion have been reported to be helpful. Exogenous ochronosis is different from hereditary ochronosis, which is an inherited condition that occurs with alkaptonuria.","definition_xrefs":["GARD:0010757"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ochronosis disorder","termid":"MONDO:0001910"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"exogenous ochronosis","secondary_identifiers":["icd11.foundation:835922687","MESH:C531762","SCTID:410041002","UMLS:C5887145","ICD9:270.2","MEDGEN:1854236"],"synonyms":[{"name":"exogenous ochronosis","type":"exact"},{"name":"ochronosis, acquired","type":"related"},{"name":"ocular ochronosis","type":"related"},{"name":"pseudo-ochronosis","type":"related"}],"termid":"MONDO:0023094","xrefs":{"Monarch":{"xref_id":"0023094"}}}


id: PBO:0060173
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microtubule associated scaffold protein 2","termid":"PBO:0060173"}


id: PBO:0045226
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DnaJ heat shock protein family (Hsp40) member C14","termid":"PBO:0045226"}


id: GO:0031001
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a brefeldin A stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to antibiotic","termid":"GO:0046677"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to brefeldin A","termid":"GO:0031001"}


id: MONDO:0025139
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A myodegeneration most frequent in calves and lambs whose dams have been fed during gestation or longer on feeds, especially legumes (fabaceae), grown in certain areas where selenium is either deficient or unavailable in the soil. It has been recorded in many countries. It has been produced experimentally in several species of animals on low-selenium intake. A similar myopathy occurs naturally in goats, deer, foals, and dogs but proof of the etiology is lacking. (Merck Veterinary Manual, 5th ed)","definition_xrefs":["MESH:D014912"],"direct_ancestors":[{"relation_name":"is_a","term_name":"muscular dystrophy, non-human animal","termid":"MONDO:0024965"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"white muscle disease","synonyms":[{"name":"White muscle diseases","type":"related"},{"name":"disease, White muscle","type":"related"},{"name":"diseases, White muscle","type":"related"},{"name":"muscle disease, White","type":"related"},{"name":"muscle diseases, White","type":"related"}],"termid":"MONDO:0025139","xrefs":{"Monarch":{"xref_id":"0025139"}}}


id: GO:0010759
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of macrophage chemotaxis. Macrophage chemotaxis is the movement of a macrophage in response to an external stimulus.","definition_xrefs":["GOC:dph","GOC:tb","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of leukocyte chemotaxis","termid":"GO:0002690"},{"relation_name":"is_a","term_name":"regulation of macrophage chemotaxis","termid":"GO:0010758"},{"relation_name":"is_a","term_name":"regulation of granulocyte chemotaxis","termid":"GO:0071622"},{"relation_name":"is_a","term_name":"positive regulation of macrophage migration","termid":"GO:1905523"},{"relation_name":"positively_regulates","term_name":"macrophage chemotaxis","termid":"GO:0048246"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of macrophage chemotaxis","termid":"GO:0010759"}


id: FYECO:0000169
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which ethanolamine was added to the medium or assay buffers in a limiting quantity compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping limited","termid":"FYECO:0000011"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ limited ethanolamine","termid":"FYECO:0000169"}


id: PBO:0073584
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"shieldin complex subunit 2","termid":"PBO:0073584"}


id: GO:0072361
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of glycolysis by modulating the frequency, rate or extent of transcription from an RNA polymerase II promoter.","definition_xrefs":["GOC:mah","GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of glycolytic process by regulation of transcription from RNA polymerase II promoter (obsolete GO:0072361)","termid":"GO:0072361"}


id: PBO:0003629
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinetochore protein Mis15","termid":"PBO:0003629"}


id: SO:0002342
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A ncRNA_gene that encodes an ncRNA less than 200 nucleotides in length.","definition_xrefs":["PMID:30937442","PMID:28449079","PMID:30069443"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ncRNA_gene","termid":"SO:0001263"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sncRNA_gene","synonyms":[{"name":"small non-coding RNA gene","type":"exact"},{"name":"sncRNA gene","type":"exact"}],"termid":"SO:0002342"}


id: PBO:0061631
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nudix hydrolase 14","termid":"PBO:0061631"}


id: MONDO:0006574
data:
  {"annotated_genes":["SJAG_00031"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87052],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007908"}]},"cv_name":"mondo","definition":"A neoplastic process characterized by diffuse overgrowth of mature adipose tissue.","definition_xrefs":["NCIT:C3193"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"skin disorder","termid":"MONDO:0005093"},{"relation_name":"is_a","term_name":"benign lipomatous neoplasm","termid":"MONDO:0044983"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00031":null},"genotype_count":0,"is_obsolete":false,"name":"lipomatosis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["ICD9:272.8","SCTID:402693001","MESH:D008068","EFO:1000728","UMLS:C0023801","DOID:3153","Wikipedia:Lipomatosis","MEDGEN:9781"],"synonyms":[{"name":"Launois-Bensaude syndrome","type":"exact"},{"name":"Madelung disease","type":"exact"},{"name":"Madelung's disease","type":"exact"},{"name":"lipomatosis","type":"exact"}],"termid":"MONDO:0006574","terms_by_termid":{"MONDO:0007908":null},"xrefs":{"Monarch":{"xref_id":"0006574"}}}


id: PBO:0057581
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 885","termid":"PBO:0057581"}


id: PBO:0036260
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADEnine requiring","termid":"PBO:0036260"}


id: MONDO:0012913
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A sub-phenotype of WAGR that includes obesity, and is associated with mutation(s) in the BDNF gene.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"WAGR syndrome","termid":"MONDO:0008681"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Wilms tumor, aniridia, genitourinary anomalies, intellectual disability, and obesity syndrome","secondary_identifiers":["MESH:C567292","UMLS:C2675904","OMIM:612469","NCIT:C122804","MEDGEN:382718","GARD:15559"],"synonyms":[{"name":"WAGR syndrome with obesity","type":"related"},{"name":"WAGRO","type":"related"},{"name":"Wagro syndrome","type":"related"},{"name":"Wilms tumor, aniridia, genitourinary anomalies, intellectual disability, and obesity syndrome","type":"exact"},{"name":"Wilms tumor, aniridia, genitourinary anomalies, mental retardation, and obesity syndrome","type":"exact"},{"name":"Wilms tumor-aniridia-genitourinary anomalies-intellectual disability-obesity syndrome","type":"exact"},{"name":"Wilms tumor-aniridia-genitourinary anomalies-mental retardation-obesity syndrome","type":"exact"},{"name":"chromosome 11P13-p12 deletion syndrome","type":"related"}],"termid":"MONDO:0012913","xrefs":{"Monarch":{"xref_id":"0012913"}}}


id: PBO:0038655
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acid phosphatase 5, tartrate resistant","termid":"PBO:0038655"}


id: MONDO:0003892
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A morphologic variant of lung adenocarcinoma characterized by the presence of acinar structures composed of columnar or cuboidal cells. (NCI05)","definition_xrefs":["NCIT:C5649"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lung adenocarcinoma","termid":"MONDO:0005061"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"acinar lung adenocarcinoma","secondary_identifiers":["DOID:6482","UMLS:C1332137","MEDGEN:233130"],"synonyms":[{"name":"acinar adenocarcinoma of lung","type":"exact"},{"name":"acinar adenocarcinoma of the lung","type":"exact"},{"name":"acinar lung adenocarcinoma","type":"exact"},{"name":"lung acinar adenocarcinoma","type":"related"}],"termid":"MONDO:0003892","xrefs":{"Monarch":{"xref_id":"0003892"}}}


id: MONDO:0012156
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A congenital myasthenic syndrome characterized by defects in postsynaptic neuromuscular junctions with early-onset progressive muscle weakness that has material basis in mutation in the CHRNA1 gene on chromosome 2q.","definition_xrefs":["DOID:0110662","PMID:10195214","PMID:15079006","PMID:25792100"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital myasthenic syndrome 1A","termid":"MONDO:0011088"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"myasthenic syndrome, congenital, 1B, fast-channel","secondary_identifiers":["GARD:15445","MEDGEN:909200","OMIM:608930","UMLS:C4225405"],"synonyms":[{"name":"CMS1B","type":"exact"},{"name":"congenital myasthenic syndrome 1B","type":"related"},{"name":"congenital myasthenic syndrome 1B, fast-channel","type":"exact"},{"name":"congenital myasthenic syndrome type 1B","type":"exact"},{"name":"myasthenic syndrome, congenital, 1B, FAST-channel","type":"related"},{"name":"myasthenic syndrome, congenital, 1B, fast-channel","type":"exact"}],"termid":"MONDO:0012156","xrefs":{"Monarch":{"xref_id":"0012156"}}}


id: PBO:0074679
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 63","termid":"PBO:0074679"}


id: MONDO:0010748
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Torticollis-keloids-cryptorchidism-renal dysplasia syndrome is an extremely rare developmental defect during embryogenesis malformation syndrome characterized by congenital muscular torticollis associated with skin anomalies (such as multiple keloids, pigmented nevi, epithelioma), urogenital malformations (including cryptorchidism and hypospadias) and renal dysplasia (e.g. chronic pyelonephritis, renal atrophy). Additional reported features include varicose veins, intellectual disability and musculoskeletal anomalies.","definition_xrefs":["Orphanet:3341"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"torticollis-keloids-cryptorchidism-renal dysplasia syndrome","secondary_identifiers":["MESH:C536970","OMIM:314300","UMLS:C1839129","GARD:5230","MEDGEN:326819"],"synonyms":[{"name":"Goeminne TKCR syndrome","type":"exact"},{"name":"Goeminne syndrome","type":"related"},{"name":"TKCR","type":"related"},{"name":"Tkc","type":"related"},{"name":"Tkcr syndrome","type":"related"},{"name":"torticollis keloids cryptorchidism renal dysplasia","type":"related"},{"name":"torticollis, keloids, cryptorchidism, and renal dysplasia","type":"related"}],"termid":"MONDO:0010748","xrefs":{"Monarch":{"xref_id":"0010748"}}}


id: MONDO:0005034
data:
  {"annotated_genes":["SJAG_04067","SJAG_01970","SJAG_03453"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87665,86223,87666],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008566"}]},"cv_name":"mondo","definition":"A differentiated adenocarcinoma arising from the follicular cells of the thyroid gland. The nuclear features which characterize the thyroid gland papillary carcinoma are absent. Radiation exposure is a risk factor and it comprises approximately 10% to 15% of thyroid cancers. Clinically, it usually presents as a solitary mass in the thyroid gland. It is generally unifocal and thickly encapsulated and shows invasion of the capsule or the vessels. Diagnostic procedures include thyroid ultrasound and fine needle biopsy.","definition_xrefs":["NCIT:C8054"],"direct_ancestors":[{"relation_name":"is_a","term_name":"differentiated thyroid carcinoma","termid":"MONDO:0015447"},{"relation_name":"is_a","term_name":"thyroid gland adenocarcinoma","termid":"MONDO:0024622"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01970":null,"SJAG_03453":null,"SJAG_04067":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"thyroid gland follicular carcinoma","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:3962","MEDGEN:64630","UMLS:C0206682","MESH:D018263","EFO:0000501","ICDO:8330/3","HP:0006731","ICDO:8331/3","NCIT:C27380","ONCOTREE:THFO","SCTID:255028004"],"synonyms":[{"name":"carcinoma of thyroid follicle","type":"exact"},{"name":"carcinoma, follicular cell, malignant","type":"exact"},{"name":"follicular adenocarcinoma","type":"narrow"},{"name":"follicular adenocarcinoma (morphologic abnormality)","type":"narrow"},{"name":"follicular adenocarcinoma, well differentiated","type":"narrow"},{"name":"follicular adenocarcinoma, well differentiated (morphologic abnormality)","type":"narrow"},{"name":"follicular cancer of the thyroid","type":"broad"},{"name":"follicular cancer of the thyroid gland","type":"broad"},{"name":"follicular cancer of thyroid","type":"broad"},{"name":"follicular cancer of thyroid gland","type":"broad"},{"name":"follicular carcinoma","type":"exact"},{"name":"follicular carcinoma of the thyroid","type":"exact"},{"name":"follicular carcinoma of the thyroid gland","type":"exact"},{"name":"follicular carcinoma of thyroid","type":"exact"},{"name":"follicular carcinoma of thyroid gland","type":"exact"},{"name":"follicular thyroid cancer","type":"exact"},{"name":"follicular thyroid carcinoma","type":"exact"},{"name":"follicular thyroid gland carcinoma","type":"exact"},{"name":"thyroid follicle carcinoma","type":"exact"},{"name":"thyroid follicular carcinoma","type":"exact"},{"name":"thyroid gland adenocarcinoma","type":"narrow"},{"name":"thyroid gland follicular cancer","type":"broad"},{"name":"thyroid gland follicular carcinoma","type":"exact"},{"name":"well-differentiated follicular adenocarcinoma","type":"exact"},{"name":"well-differentiated follicular carcinoma","type":"broad"}],"termid":"MONDO:0005034","terms_by_termid":{"MONDO:0008566":null},"xrefs":{"Monarch":{"xref_id":"0005034"}}}


id: MONDO:1012392
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"neonatal encephalopathy with seizures, non-human animal","termid":"MONDO:1011880"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neonatal encephalopathy with seizures, dog","secondary_identifiers":["OMIA:001471-9615"],"termid":"MONDO:1012392","xrefs":{"Monarch":{"xref_id":"1012392"}}}


id: _global:promoter_of
data:
  {"annotation_feature_type":"gene","cv_name":"SO_feature_relations","definition":"Relation between a promoter and a gene.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"promoter_of","termid":"_global:promoter_of"}


id: GO:0120126
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a starvation stimulus, deprivation of copper ion.","definition_xrefs":["GOC:sl","PMID:24024382"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to metal ion starvation","termid":"GO:0180055"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to copper ion starvation","termid":"GO:0120126"}


id: GO:0061288
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regionalization process in which the identity of the mesonephric capsule is specified. Identity is considered to be the aggregate of characteristics by which a structure is recognized.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pattern specification involved in mesonephros development","termid":"GO:0061227"},{"relation_name":"is_a","term_name":"renal capsule specification","termid":"GO:0072130"},{"relation_name":"part_of","term_name":"mesonephric capsule formation","termid":"GO:0061287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesonephric capsule specification","termid":"GO:0061288"}


id: GO:0052593
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: tryptamine + H2O + O2 = NH3 + indole acetaldehyde + hydrogen peroxide + H+.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete tryptamine:oxygen oxidoreductase (deaminating) activity (obsolete GO:0052593)","termid":"GO:0052593"}


id: MONDO:1012830
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any craniomandibular osteopathy that occurs in dogs due to a mutation in the SLC37A2 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"craniomandibular osteopathy, dog","termid":"MONDO:1012054"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"craniomandibular osteopathy, SLC37A2-related, dog","secondary_identifiers":["OMIA:002244-9615"],"termid":"MONDO:1012830","xrefs":{"Monarch":{"xref_id":"1012830"}}}


id: PBO:0055613
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3052","termid":"PBO:0055613"}


id: MONDO:0971118
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"pilocytic astrocytoma","termid":"MONDO:0016691"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pilocytic astrocytoma with histological features of anaplasia","secondary_identifiers":["Orphanet:673585"],"termid":"MONDO:0971118","xrefs":{"Monarch":{"xref_id":"0971118"}}}


id: PBO:0055531
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2966","termid":"PBO:0055531"}


id: GO:0043514
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that is composed of an interleukin-12 alpha (p35, product of the IL12A gene) and an interleukin-12 beta subunit (p40, product of the IL12B gene) and is secreted into the extracellular space.","definition_xrefs":["GOC:add","GOC:ebc","PMID:12948519","GOC:mah","PMID:1381512"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"extracellular space","termid":"GO:0005615"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005576"}],"interesting_parent_ids":["GO:0032991","GO:0005576","GO:0005575"],"is_obsolete":false,"name":"interleukin-12 complex","synonyms":[{"name":"IL-12 complex","type":"exact"},{"name":"IL12A","type":"narrow"},{"name":"IL12B","type":"narrow"},{"name":"p35","type":"narrow"},{"name":"p40","type":"narrow"}],"termid":"GO:0043514"}


id: PBO:0068684
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 65, pseudogene","termid":"PBO:0068684"}


id: MONDO:1012696
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A necrotizing encephalomyelopathy that occurs in calves of the Angus breed of cattle and is characterized by symmetrical degenerative lesions in the brain and spinal cord.","definition_xrefs":["PMID:15080447"],"direct_ancestors":[{"relation_name":"is_a","term_name":"necrotising myelopathy, non-human animal","termid":"MONDO:1011850"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multifocal symmetrical necrotizing encephalomyelopathy, Angus cattle","secondary_identifiers":["OMIA:001488-9913"],"termid":"MONDO:1012696","xrefs":{"Monarch":{"xref_id":"1012696"}}}


id: PBO:0051168
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 3-52 (pseudogene)","termid":"PBO:0051168"}


id: PBO:0073271
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septin 7 pseudogene 15","termid":"PBO:0073271"}


id: PATO:0001077
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001077 absolute pressure (obsolete PATO:0001077)","termid":"PATO:0001077"}


id: GO:0010694
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of alkaline phosphatase activity, the catalysis of the reaction: an orthophosphoric monoester + H2O = an alcohol + phosphate, with an alkaline pH optimum.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of alkaline phosphatase activity","termid":"GO:0010692"},{"relation_name":"is_a","term_name":"positive regulation of phosphatase activity","termid":"GO:0010922"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of alkaline phosphatase activity","termid":"GO:0010694"}


id: PBO:0004955
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"agmatinase 2 (predicted)","termid":"PBO:0004955"}


id: PBO:0058440
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5004","termid":"PBO:0058440"}


id: PR:O42857
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A tumor suppressor candidate 4 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01041","PRO:DNx","PANTHER:PTHR12991:SF10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nitrogen permease regulator 2 homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23H3.03c","secondary_identifiers":["UniProtKB:O42857"],"synonyms":[{"name":"Spom972h-NPRL2","type":"exact"}],"termid":"PR:O42857"}


id: PBO:0026957
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_rate_of_microtubule_depolymerization_ahead_of_moving_spindle_pole_body","termid":"PBO:0026957"}


id: PBO:0088590
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypoxic oxygen sensor, prolyl-3,4-dihydroxylase Ofd1","termid":"PBO:0088590"}


id: PBO:0054809
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2222","termid":"PBO:0054809"}


id: PBO:0040479
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ataxin 2","termid":"PBO:0040479"}


id: GO:0046244
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of salicylic acid (2-hydroxybenzoic acid), a derivative of benzoic acid.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"salicylic acid metabolic process","termid":"GO:0009696"},{"relation_name":"is_a","term_name":"phenol-containing compound catabolic process","termid":"GO:0019336"},{"relation_name":"is_a","term_name":"monocarboxylic acid catabolic process","termid":"GO:0072329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"salicylic acid catabolic process","synonyms":[{"name":"salicylic acid breakdown","type":"exact"},{"name":"salicylic acid catabolism","type":"exact"},{"name":"salicylic acid degradation","type":"exact"}],"termid":"GO:0046244"}


id: MONDO:0008803
data:
  {"annotated_genes":["SJAG_04270"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85979],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008726"},{"annotations":[85455],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0020667"}]},"cv_name":"mondo","definition":"Antley-Bixler syndrome is a very rare disorder characterized by craniosynostosis with midface hypoplasia, radiohumeral synostosis, femoral bowing and joint contractures.","definition_xrefs":["Orphanet:83"],"direct_ancestors":[{"relation_name":"is_a","term_name":"craniosynostosis syndrome, autosomal recessive","termid":"MONDO:0011679"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-variable intellectual disability syndrome","termid":"MONDO:0015160"},{"relation_name":"is_a","term_name":"syndromic craniosynostosis","termid":"MONDO:0015338"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04270":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497","MONDO:0006025"],"is_obsolete":false,"name":"Antley-Bixler syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NANDO:1200669","NANDO:2200975","icd11.foundation:2027710139","DOID:0050462","UMLS:C5234850","MEDGEN:1714404","SCTID:62964007","GARD:5826","DOID:0081289"],"synonyms":[{"name":"Antley Bixler syndrome","type":"related"},{"name":"multisynostotic osteodysgenesis with long bone fractures","type":"related"},{"name":"osteodysgenesis, multisynostotic with fractures","type":"related"},{"name":"osteodysgenesis, multisynostotic, with fractures","type":"related"},{"name":"trapezoidocephaly synostosis syndrome","type":"related"},{"name":"trapezoidocephaly-synostosis syndrome","type":"exact"}],"termid":"MONDO:0008803","terms_by_termid":{"MONDO:0008726":null,"MONDO:0020667":null},"xrefs":{"Monarch":{"xref_id":"0008803"}}}


id: GO:1990295
data:
  {"annotated_genes":["SJAG_02336","SJAG_02695","SJAG_00930","SJAG_03073","SJAG_02045","SJAG_01297"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[103906,104254,108629],"is_not":false,"summary":null,"term":"GO:1990295"},{"annotations":[97331,101792],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1905759"},{"annotations":[91746],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1905760"}]},"cv_name":"cellular_component","definition":"A cytoskeletal part that consists of an array of microtubules and associated molecules that forms at the end of anaphase, and in which microtubules are nucleated from an equatorial microtubule organizing center.","definition_xrefs":["PMID:11792817","PMID:9601091","PMID:17072892"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"microtubule cytoskeleton","termid":"GO:0015630"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00930":null,"SJAG_01297":null,"SJAG_02045":null,"SJAG_02336":null,"SJAG_02695":null,"SJAG_03073":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0015630"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0015630","GO:0005575"],"is_obsolete":false,"name":"post-anaphase microtubule array","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"PAA","type":"exact"},{"name":"post-anaphase array","type":"exact"}],"termid":"GO:1990295","terms_by_termid":{"GO:1905759":null,"GO:1905760":null,"GO:1990295":null}}


id: PBO:0108576
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Clr6 and Rpd3L histone deacetylase complex LCCL domain subunit Rxt3","termid":"PBO:0108576"}


id: PBO:0089999
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protoheme IX farnesyltransferase","termid":"PBO:0089999"}


id: GO:0106268
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (3,5-dichloro-2,4,6-trihydroxyphenyl)hexan-1-one + S-adenosyl-L-methionine = 1-(3,5-dichloro-2,6-dihydroxy-4-methoxyphenyl)hexan-1-one + H+ + S-adenosyl-L-homocysteine.","definition_xrefs":["PMID:20231486","RHEA:48396"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016741","GO:0003824"],"is_obsolete":false,"name":"3,5-dichloro-THPH methyl transferase activity","synonyms":[{"name":"DIF-1 syntase","type":"related"}],"termid":"GO:0106268"}


id: GO:0097493
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The action of a molecule that contributes to the structural integrity of a complex or assembly within or outside a cell, providing elasticity and recoiling.","definition_xrefs":["GOC:rl","GOC:BHF","PMID:23283722"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structural molecule activity","termid":"GO:0005198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005198"}],"interesting_parent_ids":["GO:0005198","GO:0003674"],"is_obsolete":false,"name":"structural molecule activity conferring elasticity","termid":"GO:0097493"}


id: FYPO:0002096
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins, or of specific protein sites, occurs to a greater extent than normal during a cellular response to hydroxyurea.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein phosphorylation during vegetative growth","termid":"FYPO:0001038"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0002274","FYPO:0005447","FYPO:0002494"],"is_obsolete":false,"name":"increased protein phosphorylation during cellular response to hydroxyurea","synonyms":[{"name":"increased protein phosphorylation during cellular response to HU","type":"exact"},{"name":"increased protein phosphorylation during cellular response to hydroxyurea during mitotic cell cycle","type":"related"},{"name":"increased protein phosphorylation during cellular response to hydroxyurea during vegetative growth","type":"exact"}],"termid":"FYPO:0002096"}


id: PBO:0048610
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase, IMAP family member 2","termid":"PBO:0048610"}


id: FYPO:0005134
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins, or of specific protein sites, occurs to a lower extent than normal during a cellular response to micafungin.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein phosphorylation during vegetative growth","termid":"FYPO:0001838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0002494","FYPO:0002274"],"is_obsolete":false,"name":"decreased protein phosphorylation during cellular response to micafungin","synonyms":[{"name":"decreased protein phosphorylation during cellular response to micafungin during mitotic cell cycle","type":"related"},{"name":"decreased protein phosphorylation during cellular response to micafungin during vegetative growth","type":"exact"},{"name":"reduced protein phosphorylation during cellular response to micafungin","type":"exact"}],"termid":"FYPO:0005134"}


id: MONDO:0009927
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any 3MC syndrome in which the cause of the disease is a mutation in the COLEC11 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"3MC syndrome","termid":"MONDO:0017398"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3MC syndrome 2","secondary_identifiers":["Orphanet:2998","MESH:C535586","OMIM:265050","DOID:0060576","EFO:1001977","UMLS:C0796279","MEDGEN:167115","GARD:18428"],"synonyms":[{"name":"3MC syndrome 2","type":"exact"},{"name":"3MC syndrome caused by mutation in COLEC11","type":"exact"},{"name":"3MC syndrome type 2","type":"exact"},{"name":"3MC2","type":"related"},{"name":"3Mc syndrome type 2","type":"exact"},{"name":"COLEC11 3MC syndrome","type":"exact"},{"name":"Carnevale syndrome","type":"related"},{"name":"Carnevale syndrome, formerly","type":"related"},{"name":"Osa syndrome","type":"related"},{"name":"oculo-skeletal-abdominal syndrome","type":"related"},{"name":"ptosis of eyelids with diastasis recti and hip dysplasia","type":"related"}],"termid":"MONDO:0009927","xrefs":{"Monarch":{"xref_id":"0009927"}}}


id: PBO:0117076
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PEA15 antisense RNA 1","termid":"PBO:0117076"}


id: PBO:0085644
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in maintaining mitochondrial integrity and glutathione homeostasis; localized to the cytoplasm; in W303 strain IMI1 is encoded by one continuous open reading frame comprising of YDL037C, the intergenic region and YDL039C, while in the reference sequence of S288C, YDL037C encodes Bsc1p and YDL039C encodes Prm7p.","termid":"PBO:0085644"}


id: GO:0070064
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a proline-rich region, i.e. a region that contains a high proportion of proline residues, in a protein.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"proline-rich region binding","termid":"GO:0070064"}


id: PBO:0015270
data:
  {"annotation_feature_type":"gene","cv_name":"subunit_composition","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homomeric(3)","termid":"PBO:0015270"}


id: MONDO:0014931
data:
  {"annotated_genes":["SJAG_04274"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87512],"is_not":false,"summary":null,"term":"MONDO:0014931"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04274":null},"genotype_count":0,"is_obsolete":false,"name":"Alazami-Yuan syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C4310702","MEDGEN:934669","OMIM:617126"],"synonyms":[{"name":"ALYUS","type":"exact"},{"name":"Alazami-Yuan syndrome","type":"exact"},{"name":"Alazami-Yuan syndrome; ALYUS","type":"exact"}],"termid":"MONDO:0014931","terms_by_termid":{"MONDO:0014931":null},"xrefs":{"Monarch":{"xref_id":"0014931"}}}


id: PBO:0045812
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 alpha 1 pseudogene 2","termid":"PBO:0045812"}


id: PBO:0004898
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Npr2/3 complex subunit Npr3 (predicted)","termid":"PBO:0004898"}


id: GO:0030446
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The cell wall surrounding a fungal hypha.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fungal-type cell wall","termid":"GO:0009277"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0005618"}],"interesting_parent_ids":["GO:0005575","GO:0005618"],"is_obsolete":false,"name":"hyphal cell wall","termid":"GO:0030446"}


id: MONDO:0023650
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Littoral cell angioma is a rare primary vascular neoplasm of the spleen, composed of littoral cells that line the splenic sinuses of the red pulp. It was thought to be a benign, incidental lesion. However, many recent reports have described it to be a malignant lesion with congenital and immunological associations. The definitive diagnosis can only be made after histology and immunohistochemistry studies.","direct_ancestors":[{"relation_name":"is_a","term_name":"splenic hemangioma","termid":"MONDO:0002343"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"littoral cell angioma of the spleen","secondary_identifiers":["NCIT:C200524","MEDGEN:351507","SCTID:418040002","UMLS:C1627365","GARD:9714","MESH:C537031"],"synonyms":[{"name":"littoral cell angioma","type":"related"}],"termid":"MONDO:0023650","xrefs":{"Monarch":{"xref_id":"0023650"}}}


id: PBO:0053577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 598","termid":"PBO:0053577"}


id: MONDO:0008344
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pulmonary edema of mountaineers, susceptibility to","secondary_identifiers":["UMLS:C0340552","OMIM:178400","MESH:C535833","ICD9:416.8","MEDGEN:83314","ICD9:993.2","SCTID:233954004"],"synonyms":[{"name":"HAPH","type":"related"},{"name":"high altitude pulmonary hypertension","type":"related"},{"name":"pulmonary edema of mountaineers","type":"related"},{"name":"pulmonary edema of mountaineers, susceptibility to","type":"exact"},{"name":"pulmonary oedema of mountaineers","type":"related"}],"termid":"MONDO:0008344","xrefs":{"Monarch":{"xref_id":"0008344"}}}


id: PBO:0064995
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PR/SET domain 2","termid":"PBO:0064995"}


id: PBO:0110974
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF2462 family protein, human Leydig cell tumor 10 kDa protein homolog, implicated in rRNA transcription or rRNA processing","termid":"PBO:0110974"}


id: MONDO:0019920
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Paternal uniparental disomy of chromosome 5 is an uniparental disomy of paternal origin that most likely does not have any phenotypic expression except from cases of homozygosity for a recessive disease mutation for which only father is a carrier.","definition_xrefs":["Orphanet:96190"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome 5 disorder","termid":"MONDO:0700012"},{"relation_name":"is_a","term_name":"uniparental disomy","termid":"MONDO:0700086"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paternal uniparental disomy of chromosome 5","secondary_identifiers":["GARD:19339","icd11.foundation:1224981751","MEDGEN:1652849","UMLS:C4749377"],"synonyms":[{"name":"UPD(5)pat","type":"exact"},{"name":"paternal uniparental disomy of chromosome type 5","type":"exact"}],"termid":"MONDO:0019920","xrefs":{"Monarch":{"xref_id":"0019920"}}}


id: GO:0002548
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The movement of a monocyte in response to an external stimulus.","definition_xrefs":["PMID:11696603","PMID:15173832","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukocyte chemotaxis","termid":"GO:0030595"},{"relation_name":"is_a","term_name":"mononuclear cell migration","termid":"GO:0071674"},{"relation_name":"is_a","term_name":"myeloid leukocyte migration","termid":"GO:0097529"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"monocyte chemotaxis","termid":"GO:0002548"}


id: GO:0021703
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the locus ceruleus over time, from its formation to the mature structure. The locus ceruleus is a dense cluster of neurons within the dorsorostral pons. This nucleus is the major location of neurons that release norepinephrine throughout the brain, and is responsible for physiological responses to stress and panic.","definition_xrefs":["ISBN:0838580343","GOC:jid","GOC:cls","GO_REF:0000021","GOC:dgh","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neural nucleus development","termid":"GO:0048857"},{"relation_name":"part_of","term_name":"pons development","termid":"GO:0021548"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"locus ceruleus development","synonyms":[{"name":"locus caeruleus development","type":"exact"},{"name":"locus coeruleus development","type":"exact"}],"termid":"GO:0021703"}


id: PBO:0075177
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNRPE pseudogene 7","termid":"PBO:0075177"}


id: PBO:0088282
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar endopolyphosphatase","termid":"PBO:0088282"}


id: PBO:0064947
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"p53 regulation associated lncRNA","termid":"PBO:0064947"}


id: MONDO:0022205
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"psoriasis","termid":"MONDO:0005083"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005093"],"is_obsolete":false,"name":"pustular psoriasis","secondary_identifiers":["MEDGEN:508876","UMLS:C0152081","NANDO:2201001","SCTID:200973000","icd11.foundation:64081271","NANDO:1200240","NANDO:2100285","ICD9:696.1"],"synonyms":[{"name":"Pustular psoriasis","type":"related"},{"name":"pustular psoriasis","type":"exact"}],"termid":"MONDO:0022205","xrefs":{"Monarch":{"xref_id":"0022205"}}}


id: PBO:0076559
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TBC1 domain family member 2B","termid":"PBO:0076559"}


id: MONDO:0003192
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign or malignant neoplasm that arises from the rete ovarii which is located in the ovarian hilus. It includes adenoma, cystadenoma, cystadenofibroma, and adenocarcinoma.","definition_xrefs":["NCIT:C40016"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ovarian neoplasm","termid":"MONDO:0021068"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rete ovarii neoplasm","secondary_identifiers":["UMLS:C1514909","DOID:4895","MEDGEN:271118"],"synonyms":[{"name":"neoplasm of rete ovarii","type":"exact"},{"name":"rete ovarii neoplasm (disease)","type":"exact"},{"name":"rete ovarii tumor","type":"exact"},{"name":"rete ovarii tumour","type":"exact"},{"name":"tumor of rete ovarii","type":"exact"},{"name":"tumour of rete ovarii","type":"exact"}],"termid":"MONDO:0003192","xrefs":{"Monarch":{"xref_id":"0003192"}}}


id: PATO:0000576
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000576 relative mass value (obsolete PATO:0000576)","termid":"PATO:0000576"}


id: PATO:0000438
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A variability quality inhering in a bearer by virtue of the bearer's lacking or not exhibiting variation.","definition_xrefs":["Dictionary:http://dictionary.reference.com/"],"direct_ancestors":[{"relation_name":"is_a","term_name":"variability","termid":"PATO:0001303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"invariant","synonyms":[{"name":"constant","type":"related"},{"name":"uniform","type":"exact"}],"termid":"PATO:0000438"}


id: PBO:0074287
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLIT and NTRK like family member 2","termid":"PBO:0074287"}


id: GO:0035202
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Formation of the tracheal pits, the first tube-like structures to form in the open tracheal system. Once cells are determined to their tracheal cell fate, the tracheal pits arise by invagination of each ectodermal cluster of tracheal placode cells, between 5 and 7 hours after egg laying. An example of this is found in Drosophila melanogaster.","definition_xrefs":["GOC:mtg_sensu","PMID:11063940","PMID:11992723","PMID:14570584"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"open tracheal system development","termid":"GO:0007424"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tracheal pit formation in open tracheal system","synonyms":[{"name":"tracheal placode invagination","type":"related"},{"name":"tracheal sac formation","type":"broad"}],"termid":"GO:0035202"}


id: GO:0042900
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of arabinose, a pentose monosaccharide that occurs in both D and L configurations, and as a polymer, from one side of a membrane to the other.","definition_xrefs":["GOC:jl","ISBN:0815340729","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentose transmembrane transporter activity","termid":"GO:0015146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"arabinose transmembrane transporter activity","termid":"GO:0042900"}


id: MONDO:0015419
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Midline cervical cleft (MCC) is a rare congenital anomaly characterized by the presence at birth of a vertical, atrophic and usually erythematous skin defect, lacking adnexal elements in the midline of the neck that may be attached to a subcutaneous fibrous cord of variable length; a superior skin tag; and an inferior, short (usually about 1 cm in length) sinus (possibly with presence of discharge). If untreated (by surgical removal) complications include restriction of neck extension due to contracture and scarring. It is sometimes associated with other developmental defects such as bifid mandible, thyroglossal duct and branchial cysts, and microgenia.","definition_xrefs":["Orphanet:141288"],"direct_ancestors":[{"relation_name":"is_a","term_name":"facial cleft","termid":"MONDO:0015411"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"midline cervical cleft","secondary_identifiers":["MEDGEN:1374384","UMLS:C4479645","SCTID:403557001","GARD:19971","icd11.foundation:1138096311","ICD9:744.89"],"termid":"MONDO:0015419","xrefs":{"Monarch":{"xref_id":"0015419"}}}


id: PATO:0002266
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape that inheres in a 3 dimensional entity.","definition_xrefs":["PATOC:OREGON"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-D shape","termid":"PATO:0002266"}


id: PBO:0063485
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyruvate dehydrogenase kinase 2","termid":"PBO:0063485"}


id: PBO:0024859
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MCM4/6/7 helicase complex translocates along DNA/RNA duplex","termid":"PBO:0024859"}


id: PBO:0072914
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"scavenger receptor class A member 3","termid":"PBO:0072914"}


id: PBO:0065828
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB6C, member RAS oncogene family","termid":"PBO:0065828"}


id: MONDO:0000197
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete singleton-Merten syndrome (obsolete MONDO:0000197)","termid":"MONDO:0000197","xrefs":{"Monarch":{"xref_id":"0000197"}}}


id: PBO:0082514
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Catalytic subunit of the histone acetyltransferase complex (NuA4); acetylates four conserved internal lysines of histone H4 N-terminal tail and can acetylate histone H2A; master regulator of cellular acetylation balance; required for cell cycle progression and transcriptional silencing at the rDNA locus and regulation of autophagy; human ortholog TIP60/KAT5 is implicated in cancer and other diseases, functionally complements lethality of the esa1 null mutation","termid":"PBO:0082514"}


id: RO:0002356
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"The relationship linking a cell and its participation in a process that results in the fate of the cell being specified. Once specification has taken place, a cell will be committed to differentiate down a specific pathway if left in its normal environment. ","direct_ancestors":[{"relation_name":"is_a","term_name":"results_in_developmental_progression_of","termid":"_global:results_in_developmental_progression_of"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"results_in_specification_of","termid":"RO:0002356"}


id: PBO:0038826
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADAM metallopeptidase domain 33","termid":"PBO:0038826"}


id: PBO:0001117
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUMO interaction motif","termid":"PBO:0001117"}


id: GO:0042017
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to interleukin-22.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine binding","termid":"GO:0019955"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"interleukin-22 binding","synonyms":[{"name":"IL-22 binding","type":"exact"}],"termid":"GO:0042017"}


id: GO:0018270
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of a C-terminal peptidyl-alanine ethanolamide-linked glycosylphosphatidylinositol (GPI) anchor following hydrolysis of an alanyl-peptide bond in the carboxy-terminal region of a membrane-associated protein.","definition_xrefs":["RESID:AA0163"],"gene_count":0,"genotype_count":0,"name":"obsolete GPI anchor biosynthetic process via N-alanyl-glycosylphosphatidylinositolethanolamine (obsolete GO:0018270)","termid":"GO:0018270"}


id: PBO:0041636
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CACNA1C intronic transcript 3","termid":"PBO:0041636"}


id: PBO:0055730
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LIM domain only 4","termid":"PBO:0055730"}


id: PBO:0051278
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 1-9","termid":"PBO:0051278"}


id: GO:0015166
data:
  {"annotated_genes":["SJAG_04506","SJAG_03595"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72478,73415],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005366"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a polyol from one side of a membrane to the other. A polyol is any polyhydric alcohol.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transporter activity","termid":"GO:0022857"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03595":null,"SJAG_04506":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"polyol transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-429571"],"synonyms":[{"name":"sugar/polyol channel activity","type":"narrow"}],"termid":"GO:0015166","terms_by_termid":{"GO:0005366":null}}


id: GO:0018485
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: salicylaldehyde + NAD+ + H2O = salicylate + NADH + H+.","definition_xrefs":["RHEA:18537"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde dehydrogenase (NAD+) activity","termid":"GO:0004029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"salicylaldehyde dehydrogenase (NAD+) activity","secondary_identifiers":["MetaCyc:1.2.1.65-RXN","UM-BBD_enzymeID:r0339","EC:1.2.1.65"],"synonyms":[{"name":"salicylaldehyde:NAD+ oxidoreductase activity","type":"related"}],"termid":"GO:0018485"}


id: MONDO:0007718
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"hepatocellular adenoma","termid":"MONDO:0018902"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0002515"],"is_obsolete":false,"name":"hepatic adenomas, familial","secondary_identifiers":["UMLS:C1840646","OMIM:142330","MESH:C564190","DOID:0111366","MEDGEN:374515"],"synonyms":[{"name":"hepatic adenoma, somatic","type":"exact"},{"name":"hepatic adenomas, familial","type":"exact"},{"name":"liver cell adenomas, familial","type":"related"}],"termid":"MONDO:0007718","xrefs":{"Monarch":{"xref_id":"0007718"}}}


id: GO:0046131
data:
  {"annotated_genes":["SJAG_00694","SJAG_01673"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89557],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006216"},{"annotations":[73742],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046132"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving any ribonucleoside, a nucleoside in which pyrimidine base is linked to a ribose (beta-D-ribofuranose) molecule.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleoside metabolic process","termid":"GO:0006213"},{"relation_name":"is_a","term_name":"ribonucleoside metabolic process","termid":"GO:0009119"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00694":null,"SJAG_01673":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"pyrimidine ribonucleoside metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"pyrimidine ribonucleoside metabolism","type":"exact"}],"termid":"GO:0046131","terms_by_termid":{"GO:0006216":null,"GO:0046132":null}}


id: GO:0098850
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The component of the synaptic vesicle membrane consisting of gene products and protein complexes that are loosely bound to one of its surfaces, but not integrated into the hydrophobic region.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extrinsic component of organelle membrane","termid":"GO:0031312"},{"relation_name":"part_of","term_name":"synaptic vesicle membrane","termid":"GO:0030672"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0031410","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"extrinsic component of synaptic vesicle membrane","termid":"GO:0098850"}


id: PBO:0051448
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable 4-60","termid":"PBO:0051448"}


id: PBO:0038689
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin beta like 2","termid":"PBO:0038689"}


id: GO:0016917
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with gamma-aminobutyric acid (GABA), and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity. (GABA, 4-aminobutyrate) is an amino acid which acts as a neurotransmitter in some organisms.","definition_xrefs":["GOC:jl","GOC:signaling","PMID:10637650"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane signaling receptor activity","termid":"GO:0004888"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"GABA receptor activity","synonyms":[{"name":"4-aminobutanoate receptor activity","type":"exact"},{"name":"4-aminobutyrate receptor activity","type":"exact"},{"name":"GABA binding","type":"exact"},{"name":"gamma-aminobutyrate binding","type":"exact"},{"name":"gamma-aminobutyric acid binding","type":"exact"},{"name":"gamma-aminobutyric acid receptor activity","type":"exact"}],"termid":"GO:0016917"}


id: PBO:0004159
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2-isopropylmalate synthase Leu3","termid":"PBO:0004159"}


id: PBO:0083943
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Gamma-glutamyl kinase; catalyzes the first step in proline biosynthesis; required for nitrogen starvation-induced ribophagy but not for nonselective autophagy; PRO1 has a paralog, YHR033W, that arose from the whole genome duplication","termid":"PBO:0083943"}


id: GO:0007400
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell fate determination process in which a cell becomes capable of differentiating autonomously into a neuroblast cell regardless of its environment; upon determination, the cell fate cannot be reversed. An example of this process is found in Mus musculus.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate determination","termid":"GO:0001709"},{"relation_name":"part_of","term_name":"neuroblast fate commitment","termid":"GO:0014017"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuroblast fate determination","secondary_identifiers":["GO:0043348","GO:0007408","GO:0043347"],"synonyms":[{"name":"neuroblast cell fate determination","type":"exact"},{"name":"neuroblast identity determination","type":"exact"}],"termid":"GO:0007400"}


id: MOD:00939
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative","definition_xrefs":["Unimod:500"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"},{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"hydrolyzed N-methylmaleimide cysteine adduct","synonyms":[{"name":"Nmethylmaleimide+water","type":"related"},{"name":"Nmethylmaleimidehydrolysis","type":"related"}],"termid":"MOD:00939"}


id: GO:0071608
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of macrophage inflammatory protein 1 alpha due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:rv","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemokine production","termid":"GO:0032602"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"macrophage inflammatory protein-1 alpha production","synonyms":[{"name":"CCL3 production","type":"exact"},{"name":"MIP-1a production","type":"exact"},{"name":"chemokine (C-C motif) ligand 3 production","type":"exact"},{"name":"macrophage inflammatory protein production","type":"broad"}],"termid":"GO:0071608"}


id: GO:0002270
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A change in the morphology or behavior of a plasmacytoid dendritic cell resulting from exposure to an activating factor such as a cellular or soluble ligand.","definition_xrefs":["PMID:15990333","PMID:16174109","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukocyte activation","termid":"GO:0045321"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"plasmacytoid dendritic cell activation","termid":"GO:0002270"}


id: PBO:0066571
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rh family B glycoprotein","termid":"PBO:0066571"}


id: GO:0006367
data:
  {"annotated_genes":["SJAG_02066","SJAG_04647","SJAG_00342","SJAG_04820","SJAG_00584","SJAG_03776","SJAG_02314","SJAG_05020","SJAG_00159","SJAG_00150","SJAG_03431","SJAG_02170","SJAG_01016","SJAG_03107","SJAG_01622","SJAG_00441","SJAG_00873","SJAG_02303","SJAG_04755","SJAG_02391","SJAG_04205","SJAG_01710","SJAG_00440","SJAG_02849","SJAG_03095","SJAG_03900","SJAG_04977","SJAG_01111","SJAG_02981","SJAG_00758","SJAG_03590","SJAG_04099","SJAG_04705","SJAG_00421","SJAG_02500","SJAG_04030","SJAG_04614","SJAG_04654","SJAG_01808","SJAG_01207","SJAG_00184","SJAG_04852","SJAG_04097","SJAG_00769","SJAG_05341","SJAG_02101","SJAG_04596","SJAG_00868","SJAG_02174","SJAG_00909","SJAG_02466","SJAG_00349","SJAG_03285","SJAG_01513","SJAG_03421","SJAG_01465","SJAG_00995","SJAG_02254","SJAG_04274","SJAG_04613","SJAG_02385","SJAG_00095","SJAG_01711","SJAG_00741","SJAG_00896","SJAG_01765","SJAG_03839","SJAG_03758","SJAG_04213","SJAG_01475","SJAG_03206","SJAG_03622","SJAG_00872","SJAG_05313","SJAG_02872","SJAG_01403","SJAG_03033","SJAG_03752","SJAG_02494","SJAG_01230","SJAG_02691","SJAG_00540","SJAG_00904","SJAG_02458","SJAG_02447","SJAG_00641","SJAG_00901","SJAG_04368","SJAG_04038","SJAG_00746","SJAG_01436","SJAG_02906","SJAG_04894","SJAG_01804","SJAG_03944","SJAG_02551","SJAG_00087","SJAG_02589","SJAG_03366","SJAG_04005","SJAG_04917","SJAG_02768","SJAG_01658","SJAG_02798","SJAG_00512","SJAG_02869","SJAG_03618","SJAG_00766","SJAG_01110","SJAG_07011","SJAG_00650","SJAG_01523","SJAG_00458","SJAG_04576","SJAG_02571","SJAG_03694","SJAG_03441","SJAG_05192","SJAG_03145","SJAG_03599","SJAG_03255","SJAG_01713","SJAG_03668","SJAG_00581","SJAG_03787","SJAG_02329","SJAG_04420","SJAG_03579","SJAG_01771","SJAG_00735","SJAG_03884","SJAG_01611","SJAG_01952","SJAG_00119","SJAG_01325","SJAG_02927","SJAG_01653","SJAG_00297","SJAG_00116","SJAG_05203","SJAG_03573","SJAG_04758","SJAG_00739","SJAG_02773","SJAG_03211","SJAG_03576","SJAG_02549","SJAG_04194","SJAG_02541","SJAG_04989","SJAG_00045","SJAG_02846","SJAG_00743"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[57562,67998,70531,70723,71266,73170,76573,79341,79521,80698,80776,90252,92399,92539,94275,94460,95941,97169,100589,103519,103979,105835,105875,108071,108263,108861,112469,113349,114612,115211,115523],"is_not":false,"summary":null,"term":"GO:0006367"},{"annotations":[90072,79940],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0045899"},{"annotations":[95744,99384,87810,109100,103780,104038,94702,106065,115115,106745,109127,102317,91042,90728,96224,106610,106420,119317,115680,94813,99033],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0060261"},{"annotations":[71107,71755,74072,94508,75990,70911,77226,72340,74867,75319,77630,67640],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0051123"},{"annotations":[110856,90952,88015,96254,88340,95006,114690,118348,107275,112936,115639,93878,95812,105395,109723,98594,101924,103483,92660,113358,113532,113702,115101,117289,114781,99026,110991,114616,91058,93159,94574,108053,107812,97009,95837,101337,94518,91775,108252,113512,115771,116669,115785,88517,114605,115393,112135,117996,90159,89473,107699,117654,94671,108841,96810,107123,97444,89645,98181,90428,103144,105403,109847,116730,109444,88160,117926,88701,98860,88852,104211,104933,116921,117833,116087,117948,96247,99751,106143,91072,103731,94374,94145,94484,94498,94546,109954,105994,89237,99501],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0045815"},{"annotations":[77628],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0001174"}]},"cv_name":"biological_process","definition":"A transcription initiation process that takes place at a RNA polymerase II gene promoter. Messenger RNAs (mRNA) genes, as well as some non-coding RNAs, are transcribed by RNA polymerase II.","definition_xrefs":["GOC:txnOH","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA-templated transcription initiation","termid":"GO:0006352"},{"relation_name":"part_of","term_name":"transcription by RNA polymerase II","termid":"GO:0006366"}],"gene_count":153,"genes_by_uniquename":{"SJAG_00045":null,"SJAG_00087":null,"SJAG_00095":null,"SJAG_00116":null,"SJAG_00119":null,"SJAG_00150":null,"SJAG_00159":null,"SJAG_00184":null,"SJAG_00297":null,"SJAG_00342":null,"SJAG_00349":null,"SJAG_00421":null,"SJAG_00440":null,"SJAG_00441":null,"SJAG_00458":null,"SJAG_00512":null,"SJAG_00540":null,"SJAG_00581":null,"SJAG_00584":null,"SJAG_00641":null,"SJAG_00650":null,"SJAG_00735":null,"SJAG_00739":null,"SJAG_00741":null,"SJAG_00743":null,"SJAG_00746":null,"SJAG_00758":null,"SJAG_00766":null,"SJAG_00769":null,"SJAG_00868":null,"SJAG_00872":null,"SJAG_00873":null,"SJAG_00896":null,"SJAG_00901":null,"SJAG_00904":null,"SJAG_00909":null,"SJAG_00995":null,"SJAG_01016":null,"SJAG_01110":null,"SJAG_01111":null,"SJAG_01207":null,"SJAG_01230":null,"SJAG_01325":null,"SJAG_01403":null,"SJAG_01436":null,"SJAG_01465":null,"SJAG_01475":null,"SJAG_01513":null,"SJAG_01523":null,"SJAG_01611":null,"SJAG_01622":null,"SJAG_01653":null,"SJAG_01658":null,"SJAG_01710":null,"SJAG_01711":null,"SJAG_01713":null,"SJAG_01765":null,"SJAG_01771":null,"SJAG_01804":null,"SJAG_01808":null,"SJAG_01952":null,"SJAG_02066":null,"SJAG_02101":null,"SJAG_02170":null,"SJAG_02174":null,"SJAG_02254":null,"SJAG_02303":null,"SJAG_02314":null,"SJAG_02329":null,"SJAG_02385":null,"SJAG_02391":null,"SJAG_02447":null,"SJAG_02458":null,"SJAG_02466":null,"SJAG_02494":null,"SJAG_02500":null,"SJAG_02541":null,"SJAG_02549":null,"SJAG_02551":null,"SJAG_02571":null,"SJAG_02589":null,"SJAG_02691":null,"SJAG_02768":null,"SJAG_02773":null,"SJAG_02798":null,"SJAG_02846":null,"SJAG_02849":null,"SJAG_02869":null,"SJAG_02872":null,"SJAG_02906":null,"SJAG_02927":null,"SJAG_02981":null,"SJAG_03033":null,"SJAG_03095":null,"SJAG_03107":null,"SJAG_03145":null,"SJAG_03206":null,"SJAG_03211":null,"SJAG_03255":null,"SJAG_03285":null,"SJAG_03366":null,"SJAG_03421":null,"SJAG_03431":null,"SJAG_03441":null,"SJAG_03573":null,"SJAG_03576":null,"SJAG_03579":null,"SJAG_03590":null,"SJAG_03599":null,"SJAG_03618":null,"SJAG_03622":null,"SJAG_03668":null,"SJAG_03694":null,"SJAG_03752":null,"SJAG_03758":null,"SJAG_03776":null,"SJAG_03787":null,"SJAG_03839":null,"SJAG_03884":null,"SJAG_03900":null,"SJAG_03944":null,"SJAG_04005":null,"SJAG_04030":null,"SJAG_04038":null,"SJAG_04097":null,"SJAG_04099":null,"SJAG_04194":null,"SJAG_04205":null,"SJAG_04213":null,"SJAG_04274":null,"SJAG_04368":null,"SJAG_04420":null,"SJAG_04576":null,"SJAG_04596":null,"SJAG_04613":null,"SJAG_04614":null,"SJAG_04647":null,"SJAG_04654":null,"SJAG_04705":null,"SJAG_04755":null,"SJAG_04758":null,"SJAG_04820":null,"SJAG_04852":null,"SJAG_04894":null,"SJAG_04917":null,"SJAG_04977":null,"SJAG_04989":null,"SJAG_05020":null,"SJAG_05192":null,"SJAG_05203":null,"SJAG_05313":null,"SJAG_05341":null,"SJAG_07011":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0006351","GO:0008150"],"is_obsolete":false,"name":"transcription initiation at RNA polymerase II promoter","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"secondary_identifiers":["Reactome:R-HSA-2032785","Reactome:R-HSA-167161","Reactome:R-HSA-73779","Reactome:R-HSA-75953","Reactome:R-HSA-383280","Reactome:R-HSA-350054"],"synonyms":[{"name":"transcription initiation from Pol II promoter","type":"exact"},{"name":"transcription initiation from RNA polymerase II promoter","type":"exact"}],"termid":"GO:0006367","terms_by_termid":{"GO:0001174":null,"GO:0006367":null,"GO:0045815":null,"GO:0045899":null,"GO:0051123":null,"GO:0060261":null}}


id: FYPO:0001552
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of zinc ion measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"increased cellular zinc level","synonyms":[{"name":"increased cellular zinc ion level","type":"exact"},{"name":"increased cellular zinc level during mitotic cell cycle","type":"related"},{"name":"increased cellular zinc level during vegetative growth","type":"exact"},{"name":"increased zinc accumulation","type":"related"}],"termid":"FYPO:0001552"}


id: GO:0035720
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of large protein complexes along microtubules from the cell body toward the tip of a cilium (also called flagellum), mediated by motor proteins.","definition_xrefs":["GOC:cilia","PMID:17895364","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intraciliary transport","termid":"GO:0042073"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"intraciliary anterograde transport","synonyms":[{"name":"intraflagellar anterograde transport","type":"exact"}],"termid":"GO:0035720"}


id: PBO:0046064
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EIF3J pseudogene 3","termid":"PBO:0046064"}


id: PBO:0084221
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Hsp40 chaperone with a role in SUMO-mediated protein degradation; works in concert with Hsp70 and Hsp110 (Sse1p) to promote disaggregation of intranuclear protein inclusions; competes with Hsp104 in disaggregation, supporting turnover instead of refolding; member of DnaJ-like family, conserved across eukaryotes; overexpression interferes with propagation of the [Psi+] prion; forms nuclear foci upon DNA replication stress","termid":"PBO:0084221"}


id: GO:1902195
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving isovaleryl-CoA(4-).","definition_xrefs":["GOC:TermGenie","PMID:11231285"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty-acyl-CoA metabolic process","termid":"GO:0035337"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006790","GO:0044281","GO:0006629","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"isovaleryl-CoA(4-) metabolic process","synonyms":[{"name":"isovaleryl-CoA(4-) metabolism","type":"exact"}],"termid":"GO:1902195"}


id: PBO:0034089
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-synapsed_by","termid":"PBO:0034089"}


id: GO:0004374
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reactions: glycine + lipoylprotein = S-aminomethyldihydrolipoylprotein + carbon dioxide (CO2), followed by S-aminomethyldihydrolipoylprotein + (6S)-tetrahydrofolate = dihydrolipoylprotein + (6R)-5,10-methylenetetrahydrofolate + ammonia. Made up of two components, aminomethyltransferase and glycine dehydrogenase (decarboxylating).","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete glycine cleavage system (obsolete GO:0004374)","synonyms":[{"name":"glycine cleavage system","type":"exact"},{"name":"glycine synthase","type":"broad"}],"termid":"GO:0004374"}


id: GO:0019800
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of a cross-link between peptide chains mediated by a chondroitin 4-sulfate glycosaminoglycan that originates from a typical O-glycosidic link to serine of one chain; the other chain is esterified, via the alpha-carbon of its C-terminal Asp, to C-6 of an internal N-acetylgalactosamine of the glycosaminoglycan chain.","definition_xrefs":["PMID:1898736","RESID:AA0219"],"gene_count":0,"genotype_count":0,"name":"obsolete peptide cross-linking via chondroitin 4-sulfate glycosaminoglycan (obsolete GO:0019800)","synonyms":[{"name":"peptide cross-linking via chondroitin 4-sulphate glycosaminoglycan","type":"exact"}],"termid":"GO:0019800"}


id: GO:0047169
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: feruloyl-CoA + galactarate = 2-(E)-O-feruloyl-D-galactarate + CoA.","definition_xrefs":["EC:2.3.1.130","RHEA:12997"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-hydroxycinnamoyltransferase activity","termid":"GO:0050737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016746","GO:0016740"],"is_obsolete":false,"name":"galactarate O-hydroxycinnamoyltransferase activity","secondary_identifiers":["KEGG_REACTION:R03727","MetaCyc:2.3.1.130-RXN"],"synonyms":[{"name":"feruloyl-CoA:galactarate O-(hydroxycinnamoyl)transferase activity","type":"related"},{"name":"galacturate hydroxycinnamoyltransferase activity","type":"related"}],"termid":"GO:0047169"}


id: MONDO:0004190
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A metaplastic lesion of the urothelium found in the urinary bladder. It is characterized by the presence of aggregates of cuboidal or hobnail cells and represents a reaction of the urothelium to injury caused by instrumentation, surgery or calculi.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bladder benign neoplasm","termid":"MONDO:0000384"},{"relation_name":"is_a","term_name":"nephrogenic adenoma","termid":"MONDO:0004191"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"nephrogenic adenoma of urinary bladder","secondary_identifiers":["MEDGEN:234976","DOID:7333","NCIT:C7415","UMLS:C1336892"],"synonyms":[{"name":"nephrogenic adenoma of the urinary bladder","type":"exact"},{"name":"urinary bladder nephrogenic adenoma","type":"exact"}],"termid":"MONDO:0004190","xrefs":{"Monarch":{"xref_id":"0004190"}}}


id: GO:0031300
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the organelle membrane consisting of the gene products and protein complexes having either part of their peptide sequence embedded in the hydrophobic region of the membrane or some other covalently attached group such as a GPI anchor that is similarly embedded in the membrane.","definition_xrefs":["GOC:dos","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete intrinsic component of organelle membrane (obsolete GO:0031300)","synonyms":[{"name":"intrinsic to organelle membrane","type":"narrow"}],"termid":"GO:0031300"}


id: SO:0001169
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A ds_RNA_viral_sequence is a viral_sequence that is the sequence of a virus that exists as double stranded RNA.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral_sequence","termid":"SO:0001041"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ds_RNA_viral_sequence","synonyms":[{"name":"double stranded RNA virus sequence","type":"exact"},{"name":"ds RNA viral sequence","type":"exact"}],"termid":"SO:0001169"}


id: PATO:0000999
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality of a single process inhering in a bearer by virtue of the bearer's successive change from one thing or state to another and back again.","definition_xrefs":["WordNet:WordNet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"occurrence","termid":"PATO:0000057"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alternation","termid":"PATO:0000999"}


id: PBO:0049043
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 34","termid":"PBO:0049043"}


id: GO:0035119
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process, occurring in the embryo, by which the anatomical structures of the pelvic fin are generated and organized. The pelvic fins are bilaterally paired fins mounted in a ventral-lateral position on most fish. These fins are used primarily for lateral mobility and propulsion.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic appendage morphogenesis","termid":"GO:0035113"},{"relation_name":"is_a","term_name":"pelvic fin morphogenesis","termid":"GO:0035139"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"embryonic pelvic fin morphogenesis","termid":"GO:0035119"}


id: PBO:0066593
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RHOG family member 2, pseudogene","termid":"PBO:0066593"}


id: GO:0014899
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process, occurring in the heart, in which a decrease in cell mass and then in heart size occurs due to shrinking of the individual cells. The shrinkage is caused by protein degradation.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac muscle adaptation","termid":"GO:0014887"},{"relation_name":"is_a","term_name":"striated muscle atrophy","termid":"GO:0014891"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardiac muscle atrophy","termid":"GO:0014899"}


id: MONDO:0016241
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare neurodevelopmental disorder characterized by recurrent episodes of hemiplegia and paroxysmal disturbances associated with persistent developmental delay and cognitive impairment.","definition_xrefs":["Orphanet:2131"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hemiplegia","termid":"MONDO:0001170"},{"relation_name":"is_a","term_name":"alternating hemiplegia","termid":"MONDO:0016210"},{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"alternating hemiplegia of childhood","secondary_identifiers":["SCTID:230466004","NANDO:1200525","icd11.foundation:301329822","DOID:0050635","OMIMPS:104290","UMLS:C0338488","MEDGEN:90925","NANDO:1200403","MESH:C536589","NANDO:2100239","NANDO:2200357","NORD:758","NANDO:2200883","NCIT:C35261","GARD:11"],"synonyms":[{"name":"AHC","type":"exact"},{"name":"adrenal hypoplasia congenita","type":"exact"},{"name":"alternating hemiplegia","type":"related"},{"name":"alternating hemiplegia of childhood","type":"exact"},{"name":"alternating hemiplegia syndrome","type":"related"},{"name":"childhood alternating hemiplegia","type":"exact"},{"name":"congenital adrenal Hypoplasia","type":"exact"},{"name":"congenital adrenal gland hypoplasia","type":"exact"},{"name":"paediatric alternating hemiplegia","type":"exact"},{"name":"pediatric alternating hemiplegia","type":"exact"}],"termid":"MONDO:0016241","xrefs":{"Monarch":{"xref_id":"0016241"}}}


id: PBO:0044189
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chymotrypsinogen B2","termid":"PBO:0044189"}


id: PBO:0041871
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium sensing receptor","termid":"PBO:0041871"}


id: GO:0034349
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any apoptotic process in a glial cell, a non-neuronal cell of the nervous system.","definition_xrefs":["GOC:mtg_apoptosis","GOC:sart","CL:0000125"],"direct_ancestors":[{"relation_name":"is_a","term_name":"apoptotic process","termid":"GO:0006915"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glial cell apoptotic process","synonyms":[{"name":"apoptosis of glia","type":"exact"},{"name":"apoptosis of glial cells","type":"exact"},{"name":"glia apoptosis","type":"exact"},{"name":"glia programmed cell death by apoptosis","type":"exact"},{"name":"glial cell apoptosis","type":"narrow"},{"name":"glial cell programmed cell death by apoptosis","type":"exact"},{"name":"programmed cell death of glia by apoptosis","type":"exact"},{"name":"programmed cell death of glial cells by apoptosis","type":"exact"},{"name":"programmed cell death, glia","type":"exact"},{"name":"programmed cell death, glial cells","type":"exact"}],"termid":"GO:0034349"}


id: PBO:0038970
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenosine A2a receptor","termid":"PBO:0038970"}


id: PBO:0059288
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L42 pseudogene 3","termid":"PBO:0059288"}


id: PBO:0002686
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMR and DUF1771 domain protein (predicted)","termid":"PBO:0002686"}


id: PBO:0056251
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mal, T cell differentiation protein 2","termid":"PBO:0056251"}


id: PBO:0029272
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_localization_to_chromatin_during_cellular_response_to_methyl_methanesulfonate","termid":"PBO:0029272"}


id: PBO:0089930
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ASTRA/Swr1/Ino80 complex AAA family ATPase Rvb2","termid":"PBO:0089930"}


id: GO:1903624
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of DNA catabolic process.","definition_xrefs":["PMID:2001740","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of catabolic process","termid":"GO:0009894"},{"relation_name":"is_a","term_name":"regulation of DNA metabolic process","termid":"GO:0051052"},{"relation_name":"regulates","term_name":"DNA catabolic process","termid":"GO:0006308"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0008150","GO:0006259"],"is_obsolete":false,"name":"regulation of DNA catabolic process","synonyms":[{"name":"regulation of DNA breakdown","type":"exact"},{"name":"regulation of DNA catabolism","type":"exact"},{"name":"regulation of DNA degradation","type":"exact"}],"termid":"GO:1903624"}


id: PBO:0029045
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_arsenate","termid":"PBO:0029045"}


id: PBO:0083599
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame unlikely to encode a functional protein; extensively overlaps essential NCB2 gene encoding the beta subunit of the NC2 dimeric histone-fold complex","termid":"PBO:0083599"}


id: PR:Q09797
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC22G7.03 gene.","definition_xrefs":["UniProtKB:Q09797","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C22G7.03 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22G7.03","synonyms":[{"name":"Spom972h-SPAC22G7.03","type":"exact"}],"termid":"PR:Q09797"}


id: PBO:0090200
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane SNARE Psy1","termid":"PBO:0090200"}


id: PBO:0068090
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 396","termid":"PBO:0068090"}


id: PBO:0113169
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Integral membrane protein required for efficient mating; may participate in or regulate the low affinity Ca2+ influx system, which affects intracellular signaling and cell-cell fusion during mating; targeted to vacuole via AP-3 pathway","termid":"PBO:0113169"}


id: GO:0060829
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that decreases the rate, frequency, or extent of the Wnt signaling pathway through beta-catenin in the anterior end of the neural plate. This regulation sets up a Wnt signaling gradient along the anterior/posterior axis.","definition_xrefs":["GOC:sdb_2009","GOC:dph","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of canonical Wnt signaling pathway involved in neural plate anterior/posterior pattern formation (obsolete GO:0060829)","synonyms":[{"name":"negative regulation of Wnt receptor signaling pathway through beta-catenin involved in neural plate anterior/posterior pattern formation","type":"exact"},{"name":"negative regulation of canonical Wnt receptor signaling pathway involved in neural plate anterior/posterior pattern","type":"exact"},{"name":"negative regulation of canonical Wnt receptor signalling pathway involved in neural plate anterior/posterior pattern formation","type":"exact"},{"name":"negative regulation of canonical Wnt-activated signaling pathway involved in neural plate anterior/posterior pattern","type":"exact"}],"termid":"GO:0060829"}


id: PBO:0062545
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 9 subfamily K member 1 pseudogene","termid":"PBO:0062545"}


id: MONDO:0700243
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any retinopathy caused by a variant in the CACNA1F gene.","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited retinal dystrophy","termid":"MONDO:0019118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"CACNA1F-related retinopathy","synonyms":[{"name":"CACNA1F-related retinopathy","type":"exact"}],"termid":"MONDO:0700243","xrefs":{"Monarch":{"xref_id":"0700243"}}}


id: PBO:0029485
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_swollen_curved_vegetative_cell","termid":"PBO:0029485"}


id: FYPO:0007027
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the medial cortex is abolished, and the protein is present in the cytoplasm instead.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to medial cortex during vegetative growth","termid":"FYPO:0002555"},{"relation_name":"is_a","term_name":"abolished protein localization to cell cortex, with protein mislocalized to cytoplasm, during vegetative growth","termid":"FYPO:0005501"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000138","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"abolished protein localization to medial cortex, with protein mislocalized to cytoplasm, during vegetative growth","synonyms":[{"name":"abolished protein localisation to medial cortex, with protein mislocalised to cytoplasm, during vegetative growth","type":"exact"},{"name":"abolished protein localization to medial cortex, with protein mislocalized to cytoplasm during mitotic cell cycle","type":"related"},{"name":"abolished protein localization to medial ring, with protein mislocalized to cytoplasm, during vegetative growth","type":"exact"},{"name":"protein localization to medial cortex abolished, with protein mislocalized to cytoplasm, during vegetative growth","type":"exact"}],"termid":"FYPO:0007027"}


id: PBO:0002665
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor TFIIE alpha subunit, TFIIEA, Tfa1","termid":"PBO:0002665"}


id: MOD:00298
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts four L-cysteine residues, an L-glutamic acid residue, an L-histidine residue, an L-serine residue and a one-nickel three-iron three-sulfur three-oxygen cluster to tris-L-cysteinyl L-cysteine persulfido L-glutamato L-histidino L-serinyl nickel triiron disulfide trioxide.","definition_xrefs":["RESID:AA0293","PubMed:2550436"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iron-sulfur cluster containing modification","termid":"MOD:00739"},{"relation_name":"is_a","term_name":"nickel containing modified residue","termid":"MOD:00741"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-cysteine residue","termid":"MOD:02067"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-glutamic acid residue","termid":"MOD:02068"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-histidine residue","termid":"MOD:02070"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-serine residue","termid":"MOD:02072"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"tris-L-cysteinyl L-cysteine persulfido L-glutamato L-histidino L-serinyl nickel triiron disulfide trioxide","synonyms":[{"name":"Ni-3Fe-2S-3O cluster","type":"exact"},{"name":"carbon monoxide dehydrogenase nickel-iron cofactor","type":"exact"},{"name":"hybrid nickel-triiron cluster","type":"exact"},{"name":"mu-1:2kappaO-oxido-mu-1:3kappaO-oxido-mu-2:4kappaO-oxido-mu-3:4kappaS-sulfido-mu3-2:3:4kappaS-sulfido-S-cysteinyl-N1'-histidino-O5-glutamato 1-iron-S5-cysteine persulfido-O3-serinyl 2-nickel-3,4-bis-(S-cysteinyl iron)","type":"exact"},{"name":"tris-L-cysteinyl L-cysteine persulfido L-glutamato L-histidino L-serinyl nickel triiron disulfide trioxide","type":"exact"}],"termid":"MOD:00298"}


id: PBO:0036511
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tricalbin, C2 domain protein (phospholipid binding) ER-plasma membrane tethering protein Tcb2 (predicted)","termid":"PBO:0036511"}


id: PATO:0000157
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000157 absolute temporal (obsolete PATO:0000157)","termid":"PATO:0000157"}


id: FYECO:0000008
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"The expression level of the gene was decreased compared to expressing it from its endogenous promoter in the genome.","definition_xrefs":["PomBase:al"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE FYECO:0000008 knockdown (obsolete FYECO:0000008)","termid":"FYECO:0000008"}


id: PBO:0079665
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBE2V1 pseudogene 13","termid":"PBO:0079665"}


id: MONDO:0014599
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal dominant non-syndromic intellectual disability in which the cause of the disease is a mutation in the COL4A3BP gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant non-syndromic intellectual disability","termid":"MONDO:0015802"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"intellectual disability, autosomal dominant 34","secondary_identifiers":["MEDGEN:907277","OMIM:616351","UMLS:C4225156","DOID:0070064"],"synonyms":[{"name":"COL4A3BP autosomal dominant non-syndromic intellectual disability","type":"exact"},{"name":"MRD34","type":"exact"},{"name":"autosomal dominant intellectual disability 34","type":"exact"},{"name":"autosomal dominant mental retardation 34","type":"exact"},{"name":"autosomal dominant non-syndromic intellectual disability 34","type":"related"},{"name":"autosomal dominant non-syndromic intellectual disability caused by mutation in COL4A3BP","type":"exact"},{"name":"intellectual developmental disorder, autosomal dominant 34","type":"exact"},{"name":"intellectual disability, autosomal dominant 34","type":"exact"},{"name":"intellectual disability, autosomal dominant type 34","type":"exact"},{"name":"mental retardation, autosomal dominant 34","type":"related"},{"name":"mental retardation, autosomal dominant type 34","type":"exact"}],"termid":"MONDO:0014599","xrefs":{"Monarch":{"xref_id":"0014599"}}}


id: PBO:0041746
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CAMTA1 antisense RNA 3","termid":"PBO:0041746"}


id: GO:0022872
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the PEP-dependent, phosphoryl transfer-driven transport of substances across a membrane. The transport happens by catalysis of the reaction: protein N-phosphohistidine + mannitol(out) = protein histidine + mannitol phosphate(in). This differs from primary and secondary active transport in that the solute is modified during transport.","definition_xrefs":["ISBN:0815340729","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-N(PI)-phosphohistidine-sugar phosphotransferase activity","termid":"GO:0008982"},{"relation_name":"is_a","term_name":"mannitol transmembrane transporter activity","termid":"GO:0015575"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0003824","GO:0022857","GO:0016740"],"is_obsolete":false,"name":"protein-N(PI)-phosphohistidine-mannitol phosphotransferase system transmembrane transporter activity","synonyms":[{"name":"mannitol PTS transporter activity","type":"exact"}],"termid":"GO:0022872"}


id: MONDO:1011150
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ankylosing spondylitis that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ankylosing spondylitis, non-human animal","termid":"MONDO:1010292"},{"relation_name":"is_a","term_name":"rheumatoid arthritis, dog","termid":"MONDO:1011153"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankylosing spondylitis, dog","secondary_identifiers":["OMIA:000046-9615"],"termid":"MONDO:1011150","xrefs":{"Monarch":{"xref_id":"1011150"}}}


id: MONDO:0005985
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Virus diseases caused by the togaviridae.","definition_xrefs":["MESH:D014036"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary viral infectious disease","termid":"MONDO:0100329"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Togaviridae infectious disease","secondary_identifiers":["MEDGEN:21575","UMLS:C0040361"],"synonyms":[{"name":"Togaviridae caused disease or disorder","type":"exact"},{"name":"Togaviridae disease or disorder","type":"exact"}],"termid":"MONDO:0005985","xrefs":{"Monarch":{"xref_id":"0005985"}}}


id: PR:Q9USW6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A dolichol phosphate-mannose biosynthesis regulatory protein that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02939"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dolichol phosphate-mannose biosynthesis regulatory protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC21B10.11","secondary_identifiers":["UniProtKB:Q9USW6"],"synonyms":[{"name":"Spom972h-DPM2","type":"exact"}],"termid":"PR:Q9USW6"}


id: PBO:0045029
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DIS3L antisense RNA 1","termid":"PBO:0045029"}


id: PBO:0075244
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin 14","termid":"PBO:0075244"}


id: PBO:0059410
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MRPS35 divergent transcript","termid":"PBO:0059410"}


id: PBO:0064452
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein O-fucosyltransferase 1","termid":"PBO:0064452"}


id: PBO:0053439
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 384","termid":"PBO:0053439"}


id: PR:000050533
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A histone H4, hhf2 gene translation product (Schizosaccharomyces pombe) that has had the initiator methionine removed and that has been dimethylated at the position equivalent to Lys-21 of the amino acid sequence represented by UniProtKB:P09322. UniProtKB:P09322, 2-103, Lys-21, MOD:00084.","definition_xrefs":["PMID:22150589","PomBase:VW","PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H4, hhf2 gene translation product (Schizosaccharomyces pombe)","termid":"PR:000050527"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hhf2/Me2(K20)","pombase_gene_id":"SPBC8D2.03c","synonyms":[{"name":"PRO_0000158357, Lys-21, MOD:00084","type":"exact"},{"name":"PomBase_original_PRO_term_name: histone H4, hhf2 gene translation product, initiator methionine removed dimethylated 1 (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-hhf2/InitMet-/Me2:1","type":"exact"},{"name":"UniProtKB:P09322, 2-103, Lys-21, MOD:00084","type":"broad"},{"name":"hhf2/Me2(K20)","type":"exact"},{"name":"histone H4 K20me2 (Schizosaccharomyces pombe)","type":"broad"},{"name":"histone H4 hhf2 K20me2 (Schizosaccharomyces pombe)","type":"exact"}],"termid":"PR:000050533"}


id: GO:0042079
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete GPI/GSI anchor metabolic process (obsolete GO:0042079)","synonyms":[{"name":"GPI/GSI anchor metabolic process","type":"exact"}],"termid":"GO:0042079"}


id: PBO:0089515
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA (guanine-N7-)-methyltransferase Bud23","termid":"PBO:0089515"}


id: PBO:0083924
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Fructose 1,6-bisphosphate aldolase; required for glycolysis and gluconeogenesis; catalyzes conversion of fructose 1,6 bisphosphate to glyceraldehyde-3-P and dihydroxyacetone-P; locates to mitochondrial outer surface upon oxidative stress; N-terminally propionylated in vivo","termid":"PBO:0083924"}


id: GO:1902322
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of methyl-branched fatty acid biosynthetic process.","definition_xrefs":["GOC:kmv","GOC:TermGenie","PMID:15340492"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of fatty acid biosynthetic process","termid":"GO:0042304"},{"relation_name":"regulates","term_name":"methyl-branched fatty acid biosynthetic process","termid":"GO:1902321"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006629"],"is_obsolete":false,"name":"regulation of methyl-branched fatty acid biosynthetic process","synonyms":[{"name":"regulation of methyl-branched fatty acid anabolism","type":"exact"},{"name":"regulation of methyl-branched fatty acid biosynthesis","type":"exact"},{"name":"regulation of methyl-branched fatty acid formation","type":"exact"},{"name":"regulation of methyl-branched fatty acid synthesis","type":"exact"}],"termid":"GO:1902322"}


id: PBO:0017428
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-is_a","termid":"PBO:0017428"}


id: PBO:0074209
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 41 member 2","termid":"PBO:0074209"}


id: PBO:0051796
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IQ motif containing K","termid":"PBO:0051796"}


id: PBO:0073591
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine hydroxymethyltransferase 2","termid":"PBO:0073591"}


id: GO:1902273
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of (R)-carnitine transmembrane transport.","definition_xrefs":["GOC:TermGenie","PMID:23755272"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of transmembrane transport","termid":"GO:0034763"},{"relation_name":"is_a","term_name":"regulation of (R)-carnitine transmembrane transport","termid":"GO:1902272"},{"relation_name":"negatively_regulates","term_name":"(R)-carnitine transmembrane transport","termid":"GO:1902270"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"negative regulation of (R)-carnitine transmembrane transport","synonyms":[{"name":"down regulation of (R)-carnitine transmembrane transport","type":"exact"},{"name":"down-regulation of (R)-carnitine transmembrane transport","type":"exact"},{"name":"downregulation of (R)-carnitine transmembrane transport","type":"exact"},{"name":"inhibition of (R)-carnitine transmembrane transport","type":"narrow"}],"termid":"GO:1902273"}


id: MONDO:0034099
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete SYNGAP1-related developmental and epileptic encephalopathy (obsolete MONDO:0034099)","secondary_identifiers":["GARD:22232"],"termid":"MONDO:0034099","xrefs":{"Monarch":{"xref_id":"0034099"}}}


id: PBO:0001842
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4.1.1.65","termid":"PBO:0001842"}


id: PBO:0031483
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-cellular_pigment_accumulation_phenotype","termid":"PBO:0031483"}


id: PBO:0077994
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TraB domain containing 2B","termid":"PBO:0077994"}


id: PBO:0046755
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EXOC7 pseudogene 1","termid":"PBO:0046755"}


id: MOD:01866
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces the N6-amino hydrogen atom of a lysine residue with the Applied Biosystems mTRAQ light reporter+balance group.","definition_xrefs":["Unimod:888#K","OMSSA:209"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mTRAQ light reporter+balance reagent acylated residue","termid":"MOD:01864"},{"relation_name":"is_a","term_name":"N6-acylated L-lysine","termid":"MOD:01875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:01875"}],"interesting_parent_ids":["MOD:01875"],"is_obsolete":false,"name":"mTRAQ light reporter+balance reagent N6-acylated lysine","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"},{"name":"Applied Biosystems mTRAQ(TM) reagent","type":"related"},{"name":"mTRAQ light","type":"related"},{"name":"mTRAQ light on K","type":"exact"}],"termid":"MOD:01866"}


id: GO:0045247
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex located in the cytosol containing flavin adenine dinucleotide (FAD) that, together with an acyl-CoA dehydrogenase, forms a system that oxidizes an acyl-CoA molecule and reduces ubiquinone and other acceptors.","definition_xrefs":["GOC:mtg_sensu","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"electron transfer flavoprotein complex","termid":"GO:0045251"},{"relation_name":"part_of","term_name":"cytosol","termid":"GO:0005829"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005829"}],"interesting_parent_ids":["GO:0005575","GO:0005829","GO:0005737","GO:0032991"],"is_obsolete":false,"name":"cytosolic electron transfer flavoprotein complex","termid":"GO:0045247"}


id: GO:2000674
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of type B pancreatic cell apoptotic process.","definition_xrefs":["GOC:obol","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of epithelial cell apoptotic process","termid":"GO:1904035"},{"relation_name":"regulates","term_name":"type B pancreatic cell apoptotic process","termid":"GO:0097050"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of type B pancreatic cell apoptotic process","synonyms":[{"name":"regulation of pancreatic B cell apoptosis","type":"exact"},{"name":"regulation of pancreatic beta cell apoptosis","type":"exact"},{"name":"regulation of type B pancreatic cell apoptosis","type":"narrow"}],"termid":"GO:2000674"}


id: PBO:0062649
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 12 subfamily D member 3","termid":"PBO:0062649"}


id: GO:0120073
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of any pyloric antrum smooth muscle contraction.","definition_xrefs":["GOC:sl","PMID:15890336"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of pyloric antrum smooth muscle contraction","termid":"GO:0120071"},{"relation_name":"is_a","term_name":"negative regulation of gastro-intestinal system smooth muscle contraction","termid":"GO:1904305"},{"relation_name":"negatively_regulates","term_name":"pyloric antrum smooth muscle contraction","termid":"GO:0120065"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of pyloric antrum smooth muscle contraction","termid":"GO:0120073"}


id: PBO:0072426
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S28","termid":"PBO:0072426"}


id: GO:0010361
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which blue light modulates the frequency, rate or extent of anion channel activity.","definition_xrefs":["GOC:tb","PMID:17319842","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of anion channel activity by blue light (obsolete GO:0010361)","synonyms":[{"name":"regulation by blue light of anion channel activity","type":"exact"}],"termid":"GO:0010361"}


id: GO:1900205
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any apoptotic process that is involved in metanephric nephron tubule development.","definition_xrefs":["PMID:17314325","GOC:mtg_kidney_jan10","GOC:TermGenie","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"apoptotic process involved in development","termid":"GO:1902742"},{"relation_name":"part_of","term_name":"metanephric nephron tubule development","termid":"GO:0072234"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"apoptotic process involved in metanephric nephron tubule development","synonyms":[{"name":"apoptosis of metanephric nephron tubule development","type":"narrow"},{"name":"apoptotic cell death of metanephric nephron tubule development","type":"exact"},{"name":"apoptotic process of metanephric nephron tubule development","type":"exact"},{"name":"apoptotic program of metanephric nephron tubule development","type":"narrow"},{"name":"apoptotic programmed cell death of metanephric nephron tubule development","type":"exact"},{"name":"programmed cell death by apoptosis of metanephric nephron tubule development","type":"exact"},{"name":"signaling (initiator) caspase activity of metanephric nephron tubule development","type":"related"},{"name":"type I programmed cell death of metanephric nephron tubule development","type":"narrow"}],"termid":"GO:1900205"}


id: MONDO:0018051
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Jessner lymphocytic infiltration of the skin (JLIS) is a chronic benign cutaneous disease characterized by asymptomatic non-scaly erythematous papules or plaques on the face and neck.","definition_xrefs":["Orphanet:33314"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skin disorder","termid":"MONDO:0005093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"Jessner lymphocytic infiltration of the skin","secondary_identifiers":["GARD:6940","NORD:1384","icd11.foundation:1624135677","UMLS:C0580181","MEDGEN:663150"],"synonyms":[{"name":"Jessner disease","type":"related"},{"name":"Jessner-Kanof lymphocytic infiltration of the skin","type":"exact"},{"name":"Jessner-Kanof syndrome","type":"related"},{"name":"Lymphocytic Infiltrate of Jessner","type":"exact"},{"name":"benign chronic T-cell infiltrative disorder","type":"related"},{"name":"benign lymphocytic infiltration","type":"related"},{"name":"lymphocytic infiltrate of Jessner","type":"related"}],"termid":"MONDO:0018051","xrefs":{"Monarch":{"xref_id":"0018051"}}}


id: MONDO:0020765
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"neuropathy, congenital hypomelinating","termid":"MONDO:0033352"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0005244"],"is_obsolete":false,"name":"neuropathy, congenital hypomyelinating, 2","secondary_identifiers":["OMIM:618184","UMLS:C4722277","MEDGEN:1648446"],"synonyms":[{"name":"CHN2","type":"exact"},{"name":"NEUROPATHY, CONGENITAL HYPOMYELINATING, 2","type":"exact"},{"name":"hypomyelinating neuropathy, congenital, 2","type":"exact"}],"termid":"MONDO:0020765","xrefs":{"Monarch":{"xref_id":"0020765"}}}


id: GO:1905327
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to the tracheoesophageal septum. This process pertains to the initial formation of a structure from unspecified parts.","definition_xrefs":["PMID:9731532","GOC:TermGenie","GO_REF:0000081"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tracheoesophageal septum formation","synonyms":[{"name":"esophagotracheal septum formation","type":"exact"},{"name":"tracheoesophageal ridges formation","type":"related"}],"termid":"GO:1905327"}


id: PBO:0082996
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytosolic NADP-specific isocitrate dehydrogenase; catalyzes oxidation of isocitrate to alpha-ketoglutarate; levels are elevated during growth on non-fermentable carbon sources and reduced during growth on glucose; IDP2 has a paralog, IDP3, that arose from the whole genome duplication; mutation in human homolog IDH1 is associated with low-grade gliomas and secondary glioblastomas","termid":"PBO:0082996"}


id: MONDO:0013563
data:
  {"annotated_genes":["SJAG_04165"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86332],"is_not":false,"summary":null,"term":"MONDO:0013563"}]},"cv_name":"mondo","definition":"Any multiple congenital anomalies/dysmorphic syndrome-intellectual disability in which the cause of the disease is a mutation in the PIGN gene.","definition_xrefs":["MONDO:design_pattern"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental anomaly of metabolic origin","termid":"MONDO:0015327"},{"relation_name":"is_a","term_name":"inborn disorder of glycosphingolipid and glycosylphosphatidylinositol anchor glycosylation","termid":"MONDO:0017748"},{"relation_name":"is_a","term_name":"multiple congenital anomalies-hypotonia-seizures syndrome","termid":"MONDO:0100247"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04165":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0024322"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0002525","MONDO:0024322"],"is_obsolete":false,"name":"multiple congenital anomalies-hypotonia-seizures syndrome 1","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C3279775","DOID:0080138","NCIT:C176896","Orphanet:280633","MEDGEN:481405","GARD:12781","OMIM:614080"],"synonyms":[{"name":"MCAHS1","type":"related"},{"name":"PIGN multiple congenital anomalies/dysmorphic syndrome-intellectual disability","type":"exact"},{"name":"PIGN-CDG","type":"exact"},{"name":"PIGN-related inherited GPI deficiency","type":"narrow"},{"name":"congenital disorder of glycosylation due to PIGN deficiency","type":"exact"},{"name":"glycosylphosphatidylinositol biosynthesis defect 3","type":"related"},{"name":"inherited GPI anchor-deficiency","type":"exact"},{"name":"multiple congenital anomalies - hypotonia - seizures syndrome","type":"related"},{"name":"multiple congenital anomalies-hypotonia-seizures syndrome","type":"related"},{"name":"multiple congenital anomalies-hypotonia-seizures syndrome 1","type":"exact"},{"name":"multiple congenital anomalies-hypotonia-seizures syndrome type 1","type":"exact"},{"name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability caused by mutation in PIGN","type":"exact"}],"termid":"MONDO:0013563","terms_by_termid":{"MONDO:0013563":null},"xrefs":{"Monarch":{"xref_id":"0013563"}}}


id: GO:1990717
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Part of the 9+2 axoneme, that occurs in most motile cilia, consisting of the two bridges which connect the central pair of single microtubules.","definition_xrefs":["PMID:21586547","GOC:cilia","PMID:9295136"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"axonemal central apparatus","termid":"GO:1990716"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"axonemal central bridge","termid":"GO:1990717"}


id: PBO:0062038
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily T member 7","termid":"PBO:0062038"}


id: GO:0060231
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A transition where a mesenchymal cell establishes apical/basolateral polarity, forms intercellular adhesive junctions, synthesizes basement membrane components and becomes an epithelial cell.","definition_xrefs":["GOC:tb","GOC:dph","GOC:ascb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell differentiation","termid":"GO:0030855"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesenchymal to epithelial transition","synonyms":[{"name":"epithelial cell differentiation from mesenchymal cell","type":"exact"},{"name":"mesenchymal-epithelial transition","type":"exact"}],"termid":"GO:0060231"}


id: GO:0019901
data:
  {"annotated_genes":["SJAG_01245","SJAG_06592"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[69063],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043424"},{"annotations":[71376],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034236"}]},"cv_name":"molecular_function","definition":"Binding to a protein kinase, any enzyme that catalyzes the transfer of a phosphate group, usually from ATP, to a protein substrate.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase binding","termid":"GO:0019900"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01245":null,"SJAG_06592":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"protein kinase binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null},"termid":"GO:0019901","terms_by_termid":{"GO:0034236":null,"GO:0043424":null}}


id: PATO:0000544
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000544 light_quality sensitivity value (obsolete PATO:0000544)","termid":"PATO:0000544"}


id: MONDO:0030877
data:
  {"annotated_genes":["SJAG_04312"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86081],"is_not":false,"summary":null,"term":"MONDO:0030877"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"cardioacrofacial dysplasia","termid":"MONDO:0031386"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04312":null},"genotype_count":0,"is_obsolete":false,"name":"cardioacrofacial dysplasia 2","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C5436886","MEDGEN:1731253","OMIM:619143"],"synonyms":[{"name":"CAFD2","type":"exact"},{"name":"cardioacrofacial dysplasia 2","type":"exact"},{"name":"cardioacrofacial dysplasia 2, autosomal dominant, somatic mosaicism","type":"exact"}],"termid":"MONDO:0030877","terms_by_termid":{"MONDO:0030877":null},"xrefs":{"Monarch":{"xref_id":"0030877"}}}


id: GO:2000220
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of pseudohyphal growth.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell growth","termid":"GO:0001558"},{"relation_name":"is_a","term_name":"regulation of growth of unicellular organism as a thread of attached cells","termid":"GO:0070784"},{"relation_name":"regulates","term_name":"pseudohyphal growth","termid":"GO:0007124"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of pseudohyphal growth","termid":"GO:2000220"}


id: PBO:0044283
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-X-C motif chemokine receptor 6","termid":"PBO:0044283"}


id: PBO:0041419
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complement C8 gamma chain","termid":"PBO:0041419"}


id: PBO:0059872
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myotubularin related protein 9 like, pseudogene","termid":"PBO:0059872"}


id: GO:0034765
data:
  {"annotated_genes":["SJAG_00296","SJAG_03631","SJAG_04551"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91580,113745],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905949"},{"annotations":[102505],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905665"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the directed movement of ions from one side of a membrane to the other.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transmembrane transport","termid":"GO:0034762"},{"relation_name":"is_a","term_name":"regulation of monoatomic ion transport","termid":"GO:0043269"},{"relation_name":"regulates","term_name":"monoatomic ion transmembrane transport","termid":"GO:0034220"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00296":null,"SJAG_03631":null,"SJAG_04551":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of monoatomic ion transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of ion membrane transport","type":"exact"},{"name":"regulation of ion transmembrane transport","type":"broad"},{"name":"regulation of transmembrane ion transport","type":"exact"}],"termid":"GO:0034765","terms_by_termid":{"GO:1905665":null,"GO:1905949":null}}


id: MONDO:0024877
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm involving a clitoris.","definition_xrefs":["MONDO:patterns/neoplasm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vulvar neoplasm","termid":"MONDO:0021049"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"clitoris neoplasm","secondary_identifiers":["ICD9:239.5","SCTID:126925009","MEDGEN:688068","UMLS:C1263793"],"synonyms":[{"name":"clitoral neoplasm","type":"exact"},{"name":"clitoris tumor","type":"exact"},{"name":"clitoris tumour","type":"exact"},{"name":"neoplasm of clitoris","type":"exact"},{"name":"tumor of clitoris","type":"exact"},{"name":"tumour of clitoris","type":"exact"}],"termid":"MONDO:0024877","xrefs":{"Monarch":{"xref_id":"0024877"}}}


id: PBO:0053317
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 51","termid":"PBO:0053317"}


id: GO:0018883
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving caprolactam, hexahydro-2h-azepin-2-one, a cyclic amide of caproic acid used in manufacture of synthetic fibers of the polyamide type. It can cause local irritation.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xenobiotic metabolic process","termid":"GO:0006805"},{"relation_name":"is_a","term_name":"lactam metabolic process","termid":"GO:0072338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"caprolactam metabolic process","secondary_identifiers":["UM-BBD_pathwayID:cap"],"synonyms":[{"name":"caprolactam metabolism","type":"exact"}],"termid":"GO:0018883"}


id: GO:0006893
data:
  {"annotated_genes":["SJAG_01516","SJAG_04044","SJAG_00916","SJAG_02240","SJAG_04358","SJAG_01335","SJAG_00430","SJAG_03938","SJAG_03864","SJAG_02320","SJAG_04609","SJAG_03754","SJAG_03838","SJAG_00858","SJAG_01114","SJAG_03970","SJAG_00330","SJAG_00826","SJAG_00144","SJAG_02753"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[57454,71147,72330,73013,76390,77757,92636,100124,101215,106669,107755],"is_not":false,"summary":null,"term":"GO:0006893"},{"annotations":[109957,70591,95514,113388,77981,106787,109174,107415],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043001"},{"annotations":[88447],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0042997"}]},"cv_name":"biological_process","definition":"The directed movement of substances from the Golgi to the plasma membrane in transport vesicles that move from the trans-Golgi network to the plasma membrane, where they fuse and release their contents by exocytosis.","definition_xrefs":["ISBN:0716731363"],"direct_ancestors":[{"relation_name":"is_a","term_name":"post-Golgi vesicle-mediated transport","termid":"GO:0006892"},{"relation_name":"is_a","term_name":"vesicle-mediated transport to the plasma membrane","termid":"GO:0098876"}],"gene_count":20,"genes_by_uniquename":{"SJAG_00144":null,"SJAG_00330":null,"SJAG_00430":null,"SJAG_00826":null,"SJAG_00858":null,"SJAG_00916":null,"SJAG_01114":null,"SJAG_01335":null,"SJAG_01516":null,"SJAG_02240":null,"SJAG_02320":null,"SJAG_02753":null,"SJAG_03754":null,"SJAG_03838":null,"SJAG_03864":null,"SJAG_03938":null,"SJAG_03970":null,"SJAG_04044":null,"SJAG_04358":null,"SJAG_04609":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179","GO:0016192"],"is_obsolete":false,"name":"Golgi to plasma membrane transport","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"Golgi to plasma membrane vesicle-mediated transport","type":"exact"}],"termid":"GO:0006893","terms_by_termid":{"GO:0006893":null,"GO:0042997":null,"GO:0043001":null}}


id: GO:0016997
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of alpha-glycosidic linkages in oligo- or poly(sialic) acids.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016798"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0003674","GO:0016798"],"is_obsolete":false,"name":"alpha-sialidase activity","termid":"GO:0016997"}


id: PR:O94271
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A RING finger protein 10 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03807","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized RING finger protein P8B7.23 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP8B7.23","secondary_identifiers":["UniProtKB:O94271"],"synonyms":[{"name":"Spom972h-RNF10","type":"exact"}],"termid":"PR:O94271"}


id: GO:0032150
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of ubiquinone, beginning with the conversion of chorismate to 4-hydroxybenzoate.","definition_xrefs":["GOC:mah","PMID:11583838"],"gene_count":0,"genotype_count":0,"name":"obsolete ubiquinone biosynthetic process from chorismate (obsolete GO:0032150)","termid":"GO:0032150"}


id: PBO:0069464
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 729, pseudogene","termid":"PBO:0069464"}


id: PBO:0065497
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PSMG3 pseudogene 2","termid":"PBO:0065497"}


id: GO:0060250
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A homeostatic process involved in the maintenance of an internal steady state within the germ-line stem-cell niche. This includes control of cellular proliferation and death and control of metabolic function that allows the niche to continue to function. A gem-line stem-cell niche is an anatomical structure that regulates how germ-line stem-cells are used and saves them from depletion.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure homeostasis","termid":"GO:0060249"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"germ-line stem-cell niche homeostasis","synonyms":[{"name":"germ-line stem-cell niche maintenance","type":"exact"},{"name":"maintenance of germ line stem cell niche","type":"exact"},{"name":"maintenance of germ line stem-cell niche","type":"exact"},{"name":"maintenance of germ-line stem cell niche","type":"exact"},{"name":"maintenance of germ-line stem-cell niche","type":"exact"}],"termid":"GO:0060250"}


id: MONDO:0008763
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A multisystemic disorder characterized by cone-rod dystrophy, hearing loss, obesity, insulin resistance and hyperinsulinemia, type 2 diabetes mellitus, dilated cardiomyopathy (DCM), and progressive hepatic and renal dysfunction.","definition_xrefs":["Orphanet:64"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"diabetes mellitus","termid":"MONDO:0005015"},{"relation_name":"excluded_subClassOf","term_name":"kidney disorder","termid":"MONDO:0005240"},{"relation_name":"excluded_subClassOf","term_name":"inherited renal tubular disease","termid":"MONDO:0015962"},{"relation_name":"excluded_subClassOf","term_name":"obsolete syndrome associated with dilated cardiomyopathy (obsolete MONDO:0016337)","termid":"MONDO:0016337"},{"relation_name":"excluded_subClassOf","term_name":"obsolete syndromic retinitis pigmentosa (obsolete MONDO:0020240)","termid":"MONDO:0020240"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"ciliopathy","termid":"MONDO:0005308"},{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"Alstrom syndrome","secondary_identifiers":["UMLS:C0268425","OMIM:203800","ICD9:759.89","MESH:D056769","GARD:5787","MEDGEN:78675","DOID:0050473","MedDRA:10068783","NCIT:C84549","SCTID:63702009"],"synonyms":[{"name":"ALMS","type":"exact"},{"name":"ALSS","type":"exact"},{"name":"Alstrom syndrome","type":"exact"},{"name":"Alstrom's syndrome","type":"exact"},{"name":"Alström Syndrome","type":"exact"},{"name":"Alström syndrome","type":"exact"}],"termid":"MONDO:0008763","xrefs":{"Monarch":{"xref_id":"0008763"}}}


id: PBO:0083134
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dual specificity protein phosphatase; dephosphorylates T1 and S5 in  C-terminal domain (CTD) of RNA polymerase II largest subunit, Rpo21p; autoregulates turnover of its mRNA; has a cysteine-rich motif required for function and conserved in eukaryotes; shuttles between the nucleus and cytoplasm; RTR1 has a paralog, RTR2, that arose from the whole genome duplication","termid":"PBO:0083134"}


id: GO:0044070
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the directed movement of anions, atoms or small molecules with a net negative charge into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of monoatomic ion transport","termid":"GO:0043269"},{"relation_name":"regulates","term_name":"monoatomic anion transport","termid":"GO:0006820"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of monoatomic anion transport","synonyms":[{"name":"regulation of anion transport","type":"broad"}],"termid":"GO:0044070"}


id: GO:1905099
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of guanyl-nucleotide exchange factor activity.","definition_xrefs":["PMID:20484009","GOC:TermGenie","GO_REF:0000059"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of guanyl-nucleotide exchange factor activity (obsolete GO:1905099)","synonyms":[{"name":"activation of GDP-dissociation stimulator activity","type":"narrow"},{"name":"activation of GDS","type":"narrow"},{"name":"activation of GEF","type":"narrow"},{"name":"activation of GNRP","type":"narrow"},{"name":"activation of guanyl-nucleotide exchange factor activity","type":"narrow"},{"name":"activation of guanyl-nucleotide release factor activity","type":"narrow"},{"name":"activation of guanyl-nucleotide releasing factor","type":"narrow"},{"name":"positive regulation of GDP-dissociation stimulator activity","type":"exact"},{"name":"positive regulation of GDS","type":"exact"},{"name":"positive regulation of GEF","type":"exact"},{"name":"positive regulation of GNRP","type":"narrow"},{"name":"positive regulation of guanyl-nucleotide release factor activity","type":"exact"},{"name":"positive regulation of guanyl-nucleotide releasing factor","type":"exact"},{"name":"up regulation of GDP-dissociation stimulator activity","type":"exact"},{"name":"up regulation of GDS","type":"exact"},{"name":"up regulation of GEF","type":"exact"},{"name":"up regulation of GNRP","type":"narrow"},{"name":"up regulation of guanyl-nucleotide exchange factor activity","type":"exact"},{"name":"up regulation of guanyl-nucleotide release factor activity","type":"exact"},{"name":"up regulation of guanyl-nucleotide releasing factor","type":"exact"},{"name":"up-regulation of GDP-dissociation stimulator activity","type":"exact"},{"name":"up-regulation of GDS","type":"exact"},{"name":"up-regulation of GEF","type":"exact"},{"name":"up-regulation of GNRP","type":"narrow"},{"name":"up-regulation of guanyl-nucleotide exchange factor activity","type":"exact"},{"name":"up-regulation of guanyl-nucleotide release factor activity","type":"exact"},{"name":"up-regulation of guanyl-nucleotide releasing factor","type":"exact"},{"name":"upregulation of GDP-dissociation stimulator activity","type":"exact"},{"name":"upregulation of GDS","type":"exact"},{"name":"upregulation of GEF","type":"exact"},{"name":"upregulation of GNRP","type":"narrow"},{"name":"upregulation of guanyl-nucleotide exchange factor activity","type":"exact"},{"name":"upregulation of guanyl-nucleotide release factor activity","type":"exact"},{"name":"upregulation of guanyl-nucleotide releasing factor","type":"exact"}],"termid":"GO:1905099"}


id: MONDO:0957473
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"craniosynostosis-facial dysmorphism-chiari-1 malformation-developmental and language delay syndrome","secondary_identifiers":["Orphanet:647681","UMLS:C5816752","MEDGEN:1843399"],"termid":"MONDO:0957473","xrefs":{"Monarch":{"xref_id":"0957473"}}}


id: PBO:0063233
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin 19","termid":"PBO:0063233"}


id: MONDO:0030796
data:
  {"annotated_genes":["SJAG_01797"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86434],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030634"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01797":null},"genotype_count":0,"is_obsolete":false,"name":"leukoencephalopathy, hereditary diffuse, with spheroids","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C3711381","OMIMPS:221820","MEDGEN:777989"],"termid":"MONDO:0030796","terms_by_termid":{"MONDO:0030634":null},"xrefs":{"Monarch":{"xref_id":"0030796"}}}


id: GO:0061551
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a trigeminal ganglion over time, from its formation to the mature structure.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial ganglion development","termid":"GO:0061550"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"trigeminal ganglion development","synonyms":[{"name":"trigeminal ganglia development","type":"related"}],"termid":"GO:0061551"}


id: GO:0002566
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which immune receptor genes are diversified through somatic mutation.","definition_xrefs":["ISBN:0781735149","PMID:16102575"],"direct_ancestors":[{"relation_name":"is_a","term_name":"somatic diversification of immune receptors","termid":"GO:0002200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"somatic diversification of immune receptors via somatic mutation","termid":"GO:0002566"}


id: PATO:0000300
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A mobility quality inhering in a bearer by virtue of the bearer's being incapable to move freely.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mobility","termid":"PATO:0000004"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immobile","synonyms":[{"name":"fixed","type":"related"}],"termid":"PATO:0000300"}


id: PBO:0113163
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Inhibitor of Las17p-mediated Arp2/3 complex activation; F-BAR protein that directly inhibits Las17p stimulation of Arp2/3 complex-mediated actin assembly in vitro; involved in formation of the endocytic site; intrinsically disordered domain induces bundling of Cdc11p-capped septin filaments to promote septin collar assembly, similar to mammalian ortholog FCHo2; localizes to sites of polarized growth, the septin ring, and endocytic patches; involved in actin cytoskeletal organization","termid":"PBO:0113163"}


id: MONDO:0010274
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"testicular germ cell tumor","termid":"MONDO:0010108"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testicular germ cell tumor 1","secondary_identifiers":["OMIM:300228","MEDGEN:337402","UMLS:C1846164","MESH:C564559"],"synonyms":[{"name":"TGCT1","type":"exact"},{"name":"testicular germ cell tumor","type":"broad"},{"name":"testicular germ cell tumor 1","type":"exact"},{"name":"testicular germ cell tumour","type":"broad"}],"termid":"MONDO:0010274","xrefs":{"Monarch":{"xref_id":"0010274"}}}


id: PBO:0081297
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 77","termid":"PBO:0081297"}


id: PBO:0028627
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_microtubule_cytoskeleton_morphology_during_mitotic_interphase","termid":"PBO:0028627"}


id: PBO:0045510
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DSTN pseudogene 2","termid":"PBO:0045510"}


id: MONDO:1010747
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Ehlers-Danlos syndrome in domestic cats in which the cause of the disease is a mutation in the ADAMTS2 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Ehlers-Danlos syndrome, domestic cat","termid":"MONDO:1011494"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ehlers-Danlos syndrome, dermatosparaxis type, ADAMTS2-related, domestic cat","secondary_identifiers":["OMIA:000328-9685"],"synonyms":[{"name":"dEDS","type":"exact"}],"termid":"MONDO:1010747","xrefs":{"Monarch":{"xref_id":"1010747"}}}


id: PR:Q9USJ9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 50S ribosomal protein L7/L12 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04575","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"54S ribosomal protein L12, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC4B3.09c","secondary_identifiers":["UniProtKB:Q9USJ9"],"synonyms":[{"name":"Spom972h-rplL","type":"exact"},{"name":"mitochondrial-nucleoid protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9USJ9"}


id: MONDO:0001006
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"optic atrophy","termid":"MONDO:0003608"},{"relation_name":"is_a","term_name":"glaucoma","termid":"MONDO:0005041"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"glaucomatous atrophy of optic disk","secondary_identifiers":["ICD9:377.14","MEDGEN:543288","DOID:10337","SCTID:1207009","UMLS:C0271342"],"synonyms":[{"name":"glaucomatous atrophy [cupping] of optic disc","type":"exact"},{"name":"glaucomatous atrophy [cupping] of optic disk","type":"exact"}],"termid":"MONDO:0001006","xrefs":{"Monarch":{"xref_id":"0001006"}}}


id: GO:0051727
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which a cell switches cell cycle mode from meiotic to mitotic division.","definition_xrefs":["GOC:ai","GOC:mtg_cell_cycle"],"gene_count":0,"genotype_count":0,"name":"obsolete cell cycle switching, meiotic to mitotic cell cycle (obsolete GO:0051727)","synonyms":[{"name":"cell cycle switching, meiosis to mitosis","type":"narrow"},{"name":"cell cycle switching, meiotic to mitotic cell cycle","type":"exact"},{"name":"conversion to mitosis","type":"narrow"},{"name":"conversion to mitotic cell cycle","type":"exact"},{"name":"entry into mitosis","type":"narrow"},{"name":"entry into mitotic cell cycle","type":"exact"},{"name":"initiation of mitosis","type":"narrow"},{"name":"initiation of mitotic cell cycle","type":"exact"},{"name":"mitotic entry","type":"narrow"}],"termid":"GO:0051727"}


id: PBO:0078744
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA methyltransferase 6 non-catalytic subunit","termid":"PBO:0078744"}


id: GO:1902700
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of pentose to butan-1-ol.","definition_xrefs":["PMID:18727018","GOC:mengo_curators","GO_REF:0000093","PMID:19539744","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete pentose catabolic process to butan-1-ol (obsolete GO:1902700)","synonyms":[{"name":"pentose breakdown to butan-1-ol","type":"exact"},{"name":"pentose catabolic process to 1-butanol","type":"exact"},{"name":"pentose catabolic process to butanol","type":"exact"},{"name":"pentose catabolism to butan-1-ol","type":"exact"},{"name":"pentose degradation to butan-1-ol","type":"exact"},{"name":"solventogenesis","type":"broad"}],"termid":"GO:1902700"}


id: PBO:0089637
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mug129-like protein Mug129a","termid":"PBO:0089637"}


id: PBO:0026822
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_ubiquitin-specific_protease_activity","termid":"PBO:0026822"}


id: PBO:0026722
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_oligomerization","termid":"PBO:0026722"}


id: MONDO:0003277
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant neoplasm that affects the ear. Representative examples include ceruminous adenocarcinoma and squamous cell carcinoma of the external ear and adenocarcinoma of the middle ear.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"auditory system cancer","termid":"MONDO:0004532"},{"relation_name":"is_a","term_name":"sensory system cancer","termid":"MONDO:0000649"},{"relation_name":"is_a","term_name":"head and neck cancer","termid":"MONDO:0005627"},{"relation_name":"is_a","term_name":"ear neoplasm","termid":"MONDO:0021233"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"malignant ear neoplasm","secondary_identifiers":["MEDGEN:418247","SCTID:443648003","MESH:D004428","NCIT:C9337","UMLS:C2350059","DOID:5101"],"synonyms":[{"name":"auricular cancer","type":"related"},{"name":"cancer of ear","type":"exact"},{"name":"ear cancer","type":"exact"},{"name":"malignant Ear neoplasm","type":"exact"},{"name":"malignant Ear tumor","type":"exact"},{"name":"malignant Ear tumour","type":"exact"},{"name":"malignant ear neoplasm","type":"exact"},{"name":"malignant neoplasm of Ear","type":"exact"},{"name":"malignant neoplasm of ear","type":"exact"},{"name":"malignant neoplasm of the Ear","type":"exact"},{"name":"malignant tumor of Ear","type":"exact"},{"name":"malignant tumor of ear","type":"exact"},{"name":"malignant tumor of the Ear","type":"exact"},{"name":"malignant tumour of Ear","type":"exact"},{"name":"malignant tumour of ear","type":"exact"},{"name":"malignant tumour of the Ear","type":"exact"}],"termid":"MONDO:0003277","xrefs":{"Monarch":{"xref_id":"0003277"}}}


id: GO:0004001
data:
  {"annotated_genes":["SJAG_01070"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[70287],"is_not":false,"summary":null,"term":"GO:0004001"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + adenosine = ADP + AMP.","definition_xrefs":["PMID:11223943","EC:2.7.1.20"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside kinase activity","termid":"GO:0019206"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01070":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016301","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"adenosine kinase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-9754974","RHEA:20824","MetaCyc:ADENOSINE-KINASE-RXN","Reactome:R-HSA-109624"],"synonyms":[{"name":"ATP:adenosine 5'-phosphotransferase activity","type":"related"},{"name":"adenosine 5-phosphotransferase activity","type":"exact"},{"name":"adenosine kinase (phosphorylating)","type":"related"}],"termid":"GO:0004001","terms_by_termid":{"GO:0004001":null}}


id: PBO:0078383
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation regulatory long non-coding RNA 1","termid":"PBO:0078383"}


id: GO:0100034
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any transcription from RNA polymerase II promoter process that regulates 4,6-pyruvylated galactose residue biosynthetic process.","definition_xrefs":["GOC:cjm","GOC:obol"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of 4,6-pyruvylated galactose residue biosynthetic process by transcription from RNA polymerase II promoter (obsolete GO:0100034)","termid":"GO:0100034"}


id: PBO:0080587
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WDR11 divergent transcript","termid":"PBO:0080587"}


id: PBO:0069023
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 268, pseudogene","termid":"PBO:0069023"}


id: PBO:0059746
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO3 pseudogene 20","termid":"PBO:0059746"}


id: PBO:0066192
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RBM12B antisense RNA 1","termid":"PBO:0066192"}


id: GO:0000114
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that regulates transcription such that the target genes are transcribed as part of the G1 phase of the mitotic cell cycle.","definition_xrefs":["GOC:mah","GOC:dph","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transcription involved in G1 phase of mitotic cell cycle (obsolete GO:0000114)","synonyms":[{"name":"G1-specific transcription in mitotic cell cycle","type":"related"},{"name":"regulation of transcription from RNA polymerase II promoter during G1 phase of cell cycle","type":"exact"},{"name":"regulation of transcription involved in G1 phase of mitotic cell cycle","type":"exact"}],"termid":"GO:0000114"}


id: PR:O59783
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC320.06 gene.","definition_xrefs":["UniProtKB:O59783","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C320.06 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC320.06","synonyms":[{"name":"Spom972h-SPCC320.06","type":"exact"}],"termid":"PR:O59783"}


id: PBO:0047830
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FOXP1 intronic transcript 1","termid":"PBO:0047830"}


id: PBO:0027872
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_methylated_histone_binding","termid":"PBO:0027872"}


id: PBO:0055720
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lamin A/C","termid":"PBO:0055720"}


id: PBO:0063402
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDCL2 pseudogene 1","termid":"PBO:0063402"}


id: PBO:0079713
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquilin like","termid":"PBO:0079713"}


id: GO:0046080
data:
  {"annotated_genes":["SJAG_04487"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[79829],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046081"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving dUTP, deoxyuridine (5'-)triphosphate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine deoxyribonucleoside triphosphate metabolic process","termid":"GO:0009211"},{"relation_name":"is_a","term_name":"pyrimidine deoxyribonucleotide metabolic process","termid":"GO:0009219"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04487":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"dUTP metabolic process","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"dUTP metabolism","type":"exact"}],"termid":"GO:0046080","terms_by_termid":{"GO:0046081":null}}


id: PBO:0068766
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 3, pseudogene","termid":"PBO:0068766"}


id: PBO:0056710
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MEMO1 pseudogene 2","termid":"PBO:0056710"}


id: PBO:0052510
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kelch like family member 24","termid":"PBO:0052510"}


id: PBO:0030654
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_methylamine","termid":"PBO:0030654"}


id: PBO:0002422
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonucleoside reductase large subunit Cdc22","termid":"PBO:0002422"}


id: PR:O13890
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A UPF0061 protein YdiU that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02000"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0061 protein C20G4.05c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC20G4.05c","secondary_identifiers":["UniProtKB:O13890"],"synonyms":[{"name":"Spom972h-ydiU","type":"exact"}],"termid":"PR:O13890"}


id: PBO:0036370
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell surface glycoprotein, flocculin Pfl9, DIPSY family","termid":"PBO:0036370"}


id: MONDO:0015402
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Mandibular arteriovenous malformation is a rare vascular anomaly characterized by an abnormal connection of the arterial and venous vasculature, without capillary connections, in the mandibular area, commonly presenting with minor gingival bleeding, dental loosening, lower lip numbness, facial deformity and malocclusion. This usually high-flow vascular malformation may also present with potentially life-threatening, spontaneous, or tooth extraction-induced, hemorrhagic shock.","definition_xrefs":["Orphanet:141174"],"direct_ancestors":[{"relation_name":"is_a","term_name":"facial arteriovenous malformation","termid":"MONDO:0015500"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mandibular arteriovenous malformation","secondary_identifiers":["GARD:19957","SCTID:703334000","MEDGEN:825297","UMLS:C3839452","icd11.foundation:113998538"],"synonyms":[{"name":"arteriovenous malformation of mandible","type":"exact"}],"termid":"MONDO:0015402","xrefs":{"Monarch":{"xref_id":"0015402"}}}


id: PBO:0067839
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 141","termid":"PBO:0067839"}


id: MONDO:0000727
data:
  {"annotated_genes":["SJAG_02431","SJAG_03703"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86250,86249],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008409"}]},"cv_name":"mondo","definition":"A muscular dystrophy which begins at the lower legs and affects the shoulder region earlier and more severely than distal arm.","definition_xrefs":["DOID:0060253","PMID:28179901"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Emery-Dreifuss muscular dystrophy","termid":"MONDO:0016830"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02431":null,"SJAG_03703":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"},{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336","MONDO:0005267"],"is_obsolete":false,"name":"scapuloperoneal myopathy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C2931268","MESH:C536624","MEDGEN:419759"],"synonyms":[{"name":"myopathy, scapuloperoneal","type":"related"},{"name":"scapuloperoneal syndrome, myopathic type","type":"related"}],"termid":"MONDO:0000727","terms_by_termid":{"MONDO:0008409":null},"xrefs":{"Monarch":{"xref_id":"0000727"}}}


id: GO:0035181
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Digging into the substrate by non-feeding larvae in search for food-free sites suitable for pupation.","definition_xrefs":["PMID:12848939","PMID:12848927"],"direct_ancestors":[{"relation_name":"is_a","term_name":"larval locomotory behavior","termid":"GO:0008345"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"larval burrowing behavior","synonyms":[{"name":"larval burrowing behaviour","type":"exact"}],"termid":"GO:0035181"}


id: PBO:0027553
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_chromatin_binding_at_replication_origin","termid":"PBO:0027553"}


id: PBO:0018033
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nuclear PassenGer=","termid":"PBO:0018033"}


id: PR:O13789
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC17G6.11c gene.","definition_xrefs":["UniProtKB:O13789","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized beta-glucan synthesis-associated protein C17G6.11c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17G6.11c","synonyms":[{"name":"Spom972h-SPAC17G6.11c","type":"exact"}],"termid":"PR:O13789"}


id: PBO:0041496
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 12 open reading frame 56","termid":"PBO:0041496"}


id: FYPO:0005963
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of sodium ions into a cell occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal sodium import","termid":"FYPO:0005962"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000138","FYPO:0001320","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"decreased sodium import","synonyms":[{"name":"decreased cellular sodium import","type":"exact"},{"name":"decreased sodium import across plasma membrane","type":"exact"},{"name":"decreased sodium import during mitotic cell cycle","type":"related"},{"name":"decreased sodium import during vegetative growth","type":"exact"},{"name":"decreased sodium import into cell","type":"exact"},{"name":"decreased sodium ion import","type":"exact"},{"name":"reduced sodium import","type":"exact"}],"termid":"FYPO:0005963"}


id: MONDO:0016341
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete lysosomal disease with restrictive cardiomyopathy (obsolete MONDO:0016341)","secondary_identifiers":["Orphanet:217638"],"termid":"MONDO:0016341","xrefs":{"Monarch":{"xref_id":"0016341"}}}


id: GO:0160044
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: chloride(in) + sulfate(out) = chloride(out) + sulfate(in).","definition_xrefs":["PMID:17442754"],"direct_ancestors":[{"relation_name":"is_a","term_name":"solute:inorganic anion antiporter activity","termid":"GO:0005452"},{"relation_name":"is_a","term_name":"secondary active sulfate transmembrane transporter activity","termid":"GO:0008271"},{"relation_name":"is_a","term_name":"chloride transmembrane transporter activity","termid":"GO:0015108"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"sulfate:chloride antiporter activity","termid":"GO:0160044"}


id: GO:1903776
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of double-strand break repair via single-strand annealing, removal of nonhomologous ends.","definition_xrefs":["GO_REF:0000058","PMID:25203555","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of double-strand break repair","termid":"GO:2000779"},{"relation_name":"regulates","term_name":"double-strand break repair via single-strand annealing, removal of nonhomologous ends","termid":"GO:0000736"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0006281"}],"interesting_parent_ids":["GO:0006259","GO:0006281","GO:0008150"],"is_obsolete":false,"name":"regulation of double-strand break repair via single-strand annealing, removal of nonhomologous ends","termid":"GO:1903776"}


id: GO:0052357
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways performed by an organism resulting in the breakdown of pectin in the symbiont cell wall. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["ISBN:0198547684"],"gene_count":0,"genotype_count":0,"name":"obsolete catabolism by host of symbiont cell wall pectin (obsolete GO:0052357)","termid":"GO:0052357"}


id: GO:0160065
data:
  {"annotated_genes":["SJAG_01188","SJAG_04943"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[93205,115853],"is_not":false,"summary":null,"term":"GO:0160065"}]},"cv_name":"cellular_component","definition":"A protein complex associated with the mitotic spindle pole body during interphase and mitosis and comprises of the proteins of the septation initiation signaling network (SIN) of fission yeast or mitotic exit network (MEN) of budding yeast, organized by two scaffold/adaptor proteins.","definition_xrefs":["PMID:22525225","PMID:22684255","PMID:21131906"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"outer plaque of mitotic spindle pole body","termid":"GO:0061499"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01188":null,"SJAG_04943":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005816"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0015630"}],"interesting_parent_ids":["GO:0005816","GO:0032991","GO:0015630","GO:0005575"],"is_obsolete":false,"name":"SIN/MEN signaling complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"Hippo signaling complex","type":"narrow"},{"name":"MEN signaling complex","type":"narrow"},{"name":"SIN signaling complex","type":"narrow"},{"name":"SIN/MEN signalling complex","type":"exact"}],"termid":"GO:0160065","terms_by_termid":{"GO:0160065":null}}


id: FYPO:0003574
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which acetylation of lysine at position 14 of histone H3 in centromere outer repeat regions is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal histone H3-K14 acetylation during vegetative growth","termid":"FYPO:0003224"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001320","FYPO:0001312","FYPO:0000002"],"is_obsolete":false,"name":"normal histone H3-K14 acetylation at centromere outer repeat during vegetative growth","synonyms":[{"name":"normal histone H3-K14 acetylation at centromere otr during vegetative growth","type":"exact"},{"name":"normal histone H3-K14 acetylation at centromere outer repeat during mitotic cell cycle","type":"related"},{"name":"normal histone H3-K14 acetylation at centromeric outer repeat region during vegetative growth","type":"exact"},{"name":"normal histone H3-K14 acetylation at pericentric region during vegetative growth","type":"related"},{"name":"normal histone H3-K14 acetylation at pericentromeric region during vegetative growth","type":"related"},{"name":"normal histone H3K14 acetylation at centromere outer repeat during vegetative growth","type":"exact"}],"termid":"FYPO:0003574"}


id: GO:0008843
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of nonterminal (1->4)-beta linkages of N-acetyl-D-glucosamine (GlcNAc) polymers of chitin and chitodextrins. Typically, endochitinases cleave randomly within the chitin chain.","definition_xrefs":["PMID:11468293","GOC:bf","GOC:kah","EC:3.2.1.14","GOC:pde"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chitinase activity","termid":"GO:0004568"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0016798","GO:0003674"],"is_obsolete":false,"name":"endochitinase activity","secondary_identifiers":["MetaCyc:3.2.1.14-RXN"],"synonyms":[{"name":"1,4-beta-poly-N-acetylglucosaminidase","type":"exact"},{"name":"chitinase","type":"exact"},{"name":"chitodextrinase","type":"exact"},{"name":"poly-beta-glucosaminidase","type":"exact"}],"termid":"GO:0008843"}


id: GO:0044728
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process of adding or removing a methyl group from one or more nucleotides within an DNA molecule.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete DNA methylation or demethylation (obsolete GO:0044728)","synonyms":[{"name":"changes in DNA methylation","type":"related"}],"termid":"GO:0044728"}


id: PBO:0041754
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calnexin","termid":"PBO:0041754"}


id: GO:0019931
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of peptidyl-lysine to form N6-3,4-didehydroretinylidene-L-lysine.","definition_xrefs":["RESID:AA0312"],"gene_count":0,"genotype_count":0,"name":"obsolete protein-chromophore linkage via peptidyl-N6-3-dehydroretinal-L-lysine (obsolete GO:0019931)","termid":"GO:0019931"}


id: GO:0098982
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A synapse that uses GABA as a neurotransmitter. These synapses are typically inhibitory.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"synapse","termid":"GO:0045202"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"GABA-ergic synapse","termid":"GO:0098982"}


id: PBO:0026886
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_chromatin_at_RNA_polymerase_II_promoter_during_vegetative_growth","termid":"PBO:0026886"}


id: PBO:0056690
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multiple EGF like domains 11","termid":"PBO:0056690"}


id: MONDO:0000801
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A allergic disease involving a green mud crab.","definition_xrefs":["MONDO:patterns/allergy"],"gene_count":0,"genotype_count":0,"name":"obsolete green mud crab allergy (obsolete MONDO:0000801)","secondary_identifiers":["DOID:0060526"],"synonyms":[{"name":"Scylla paramamosain allergy","type":"exact"},{"name":"allergy of green mud crab","type":"exact"},{"name":"crab allergy","type":"related"},{"name":"green mud crab allergic disease","type":"exact"}],"termid":"MONDO:0000801","xrefs":{"Monarch":{"xref_id":"0000801"}}}


id: FYPO:0000507
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which nuclear export does not occur. Nuclear export is the directed movement of any substance out of the nucleus; export of all substances or a specific substance may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal nuclear export","termid":"FYPO:0000506"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000138","FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abolished nuclear export","synonyms":[{"name":"abolished nuclear export during mitotic cell cycle","type":"related"},{"name":"absent nuclear export","type":"exact"},{"name":"nuclear export abolished","type":"exact"},{"name":"nuclear export abolished during vegetative growth","type":"exact"},{"name":"nuclear export: absent","type":"related"}],"termid":"FYPO:0000507"}


id: PBO:0072651
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retrotransposon Gag like 4","termid":"PBO:0072651"}


id: GO:0061544
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The controlled release of a peptide from a cell in which the peptide acts as a neurotransmitter.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide secretion","termid":"GO:0002790"},{"relation_name":"is_a","term_name":"neurotransmitter secretion","termid":"GO:0007269"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0023052","GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"peptide secretion, neurotransmission","termid":"GO:0061544"}


id: PBO:0078656
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Lys (anticodon CTT) 9-1","termid":"PBO:0078656"}


id: PBO:0080355
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 2 receptor 10, pseudogene","termid":"PBO:0080355"}


id: PBO:0071909
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS3A pseudogene 48","termid":"PBO:0071909"}


id: PR:Q9UT03
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sls1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UT03"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein sls1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAP8A3.14c","synonyms":[{"name":"Spom972h-sls1","type":"exact"}],"termid":"PR:Q9UT03"}


id: GO:0002731
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of dendritic cell cytokine production.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of leukocyte mediated immunity","termid":"GO:0002704"},{"relation_name":"is_a","term_name":"negative regulation of cytokine production involved in immune response","termid":"GO:0002719"},{"relation_name":"is_a","term_name":"regulation of dendritic cell cytokine production","termid":"GO:0002730"},{"relation_name":"negatively_regulates","term_name":"dendritic cell cytokine production","termid":"GO:0002371"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"negative regulation of dendritic cell cytokine production","synonyms":[{"name":"down regulation of dendritic cell cytokine production","type":"exact"},{"name":"down-regulation of dendritic cell cytokine production","type":"exact"},{"name":"downregulation of dendritic cell cytokine production","type":"exact"},{"name":"inhibition of dendritic cell cytokine production","type":"narrow"}],"termid":"GO:0002731"}


id: PBO:0004434
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"magnesium ion transporter Mrs2 (predicted)","termid":"PBO:0004434"}


id: PBO:0047046
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 110 member A","termid":"PBO:0047046"}


id: MONDO:0003171
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A astrocytoma that involves the pineal body.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diencephalic astrocytomas","termid":"MONDO:0003169"},{"relation_name":"is_a","term_name":"pineal gland cancer","termid":"MONDO:0003249"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"pineal gland astrocytoma","secondary_identifiers":["NCIT:C8274","UMLS:C0280795","MEDGEN:83711","DOID:4858"],"synonyms":[{"name":"astrocytoma (excluding glioblastoma) of pineal body","type":"exact"},{"name":"astrocytoma of pineal gland","type":"exact"},{"name":"astrocytoma of the pineal gland","type":"exact"},{"name":"pineal astrocytic tumor","type":"exact"},{"name":"pineal astrocytic tumour","type":"exact"},{"name":"pineal astrocytoma","type":"exact"},{"name":"pineal body astrocytoma","type":"exact"},{"name":"pineal body astrocytoma (excluding glioblastoma)","type":"exact"}],"termid":"MONDO:0003171","xrefs":{"Monarch":{"xref_id":"0003171"}}}


id: PBO:0041885
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cation channel sperm associated 3","termid":"PBO:0041885"}


id: MONDO:0003037
data:
  {"annotated_genes":["SJAG_01202","SJAG_00624","SJAG_00155","SJAG_03469"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85662],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014027"},{"annotations":[86808,86809],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014384"},{"annotations":[86631],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032649"}]},"cv_name":"mondo","definition":"A congenital condition, usually due to genetic aberrations, that is characterized by a lack of hair growth on the head and/or body.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of pilosebaceous unit","termid":"MONDO:0002917"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00155":null,"SJAG_00624":null,"SJAG_01202":null,"SJAG_03469":null},"genotype_count":0,"is_obsolete":false,"name":"hypotrichosis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIMPS:605389","MESH:D007039","NCIT:C34720","MEDGEN:6993","DOID:4535","SCTID:53602002","UMLS:C0020678","ICD9:704.09"],"termid":"MONDO:0003037","terms_by_termid":{"MONDO:0014027":null,"MONDO:0014384":null,"MONDO:0032649":null},"xrefs":{"Monarch":{"xref_id":"0003037"}}}


id: GO:0051569
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of the covalent addition of a methyl group to the lysine at position 4 of histone H3.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of histone H3-K4 methylation (obsolete GO:0051569)","termid":"GO:0051569"}


id: GO:0045701
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of spermatid nuclear differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of organelle organization","termid":"GO:0010639"},{"relation_name":"is_a","term_name":"negative regulation of cell differentiation","termid":"GO:0045596"},{"relation_name":"is_a","term_name":"regulation of spermatid nuclear differentiation","termid":"GO:0045700"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"negative regulation of reproductive process","termid":"GO:2000242"},{"relation_name":"negatively_regulates","term_name":"spermatid nucleus differentiation","termid":"GO:0007289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of spermatid nuclear differentiation","synonyms":[{"name":"down regulation of spermatid nuclear differentiation","type":"exact"},{"name":"down-regulation of spermatid nuclear differentiation","type":"exact"},{"name":"downregulation of spermatid nuclear differentiation","type":"exact"},{"name":"inhibition of spermatid nuclear differentiation","type":"narrow"}],"termid":"GO:0045701"}


id: PBO:0049418
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTP binding elongation factor GUF1","termid":"PBO:0049418"}


id: GO:0140108
data:
  {"annotated_genes":["SJAG_03608"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[114560],"is_not":false,"summary":null,"term":"GO:0140108"}]},"cv_name":"molecular_function","definition":"Enables the transfer of D-glucose from one side of a membrane to the other. In high-affinity transport the transporter is able to bind the solute even if it is only present at very low concentrations.","definition_xrefs":["PMID:25411338"],"direct_ancestors":[{"relation_name":"is_a","term_name":"D-glucose transmembrane transporter activity","termid":"GO:0055056"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03608":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"high-affinity D-glucose transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"high-affinity glucose transmembrane transporter activity","type":"exact"}],"termid":"GO:0140108","terms_by_termid":{"GO:0140108":null}}


id: PBO:0052076
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"katanin regulatory subunit B1 like 1 pseudogene 1","termid":"PBO:0052076"}


id: GO:0080038
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cytokinin signaling.","definition_xrefs":["GOC:dhl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of signal transduction","termid":"GO:0009967"},{"relation_name":"is_a","term_name":"regulation of cytokinin-activated signaling pathway","termid":"GO:0080036"},{"relation_name":"positively_regulates","term_name":"cytokinin-activated signaling pathway","termid":"GO:0009736"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of cytokinin-activated signaling pathway","synonyms":[{"name":"positive regulation of cytokinin mediated signaling pathway","type":"related"},{"name":"positive regulation of cytokinin mediated signalling","type":"exact"}],"termid":"GO:0080038"}


id: PBO:0110325
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ACTR2 pseudogene 1","termid":"PBO:0110325"}


id: PBO:0058294
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4668","termid":"PBO:0058294"}


id: PBO:0056046
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LTO1 pseudogene 1","termid":"PBO:0056046"}


id: MONDO:0004061
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete mitochondrial myopathy (obsolete MONDO:0004061)","termid":"MONDO:0004061","xrefs":{"Monarch":{"xref_id":"0004061"}}}


id: PBO:0069869
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1156, pseudogene","termid":"PBO:0069869"}


id: MONDO:0004768
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of both the cornea and the conjunctiva.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"keratitis","termid":"MONDO:0003085"},{"relation_name":"is_a","term_name":"conjunctivitis","termid":"MONDO:0003799"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"keratoconjunctivitis","secondary_identifiers":["ICD9:370.49","NCIT:C34744","ICD9:370.40","MESH:D007637","UMLS:C0022573","DOID:9368","MEDGEN:44014","SCTID:88151007","HP:0001096","ICD10CM:H16.2","ICD9:370.8"],"termid":"MONDO:0004768","xrefs":{"Monarch":{"xref_id":"0004768"}}}


id: PBO:0072429
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S28 pseudogene 3","termid":"PBO:0072429"}


id: PBO:0061356
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleophosmin 1 pseudogene 14","termid":"PBO:0061356"}


id: PBO:0082243
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alpha subunit of farnesyltransferase and geranylgeranyltransferase-I; farnesyltransferase (Ram2p-Ram1p heterodimer) catalyzes the addition of 15-carbon isoprenoid farnesyl to substrate proteins containing a CAAX consensus motif; type I geranylgeranyltransferase (Ram2p-Cdc43p heterodimer) catalyzes the addition of the 20-carbon isoprenoid geranylgeranyl to substrate proteins containing a CaaL consensus motif; required for membrane localization of Ras proteins and a-factor","termid":"PBO:0082243"}


id: PBO:0057946
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3670-2","termid":"PBO:0057946"}


id: PBO:0034513
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_H4-K20_dimethylation_at_double-strand_break_site","termid":"PBO:0034513"}


id: GO:0014885
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events by which an injury stimulus is received and converted into a molecular signal. This occurs as part of the regulation of muscle adaptation.","definition_xrefs":["GOC:ef","GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of wounding","termid":"GO:0014822"},{"relation_name":"is_a","term_name":"response to injury involved in regulation of muscle adaptation","termid":"GO:0014876"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of injury involved in regulation of muscle adaptation","synonyms":[{"name":"detection of injury involved in regulation of muscle plasticity","type":"related"}],"termid":"GO:0014885"}


id: PBO:0082887
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cyclin; interacts with Pho85p cyclin-dependent kinase (Cdk) to phosphorylate and regulate glycogen synthase, also activates Pho85p for Glc8p phosphorylation; PCL8 has a paralog, PCL10, that arose from the whole genome duplication","termid":"PBO:0082887"}


id: PBO:0043889
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"corticotropin releasing hormone receptor 1","termid":"PBO:0043889"}


id: GO:0032739
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of interleukin-16 production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine production","termid":"GO:0001819"},{"relation_name":"is_a","term_name":"regulation of interleukin-16 production","termid":"GO:0032659"},{"relation_name":"positively_regulates","term_name":"interleukin-16 production","termid":"GO:0032619"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of interleukin-16 production","secondary_identifiers":["GO:0045377"],"synonyms":[{"name":"activation of interleukin-16 production","type":"narrow"},{"name":"positive regulation of IL-16 production","type":"exact"},{"name":"positive regulation of interleukin-16 biosynthetic process","type":"narrow"},{"name":"stimulation of interleukin-16 production","type":"narrow"},{"name":"up regulation of interleukin-16 production","type":"exact"},{"name":"up-regulation of interleukin-16 production","type":"exact"},{"name":"upregulation of interleukin-16 production","type":"exact"}],"termid":"GO:0032739"}


id: PBO:0058384
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4756","termid":"PBO:0058384"}


id: GO:0070925
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