# terms

id: MONDO:0020225
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A cataract (disease) that is part of a larger syndrome.","definition_xrefs":["MONDO:patterns/syndromic"],"gene_count":0,"genotype_count":0,"name":"obsolete syndromic cataract (obsolete MONDO:0020225)","secondary_identifiers":["Orphanet:98641"],"synonyms":[{"name":"syndrome associated with cataract (disease)","type":"exact"},{"name":"syndromic cataract (disease)","type":"exact"}],"termid":"MONDO:0020225","xrefs":{"Monarch":{"xref_id":"0020225"}}}


id: GO:0046964
data:
  {"annotated_genes":["SJAG_03334"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[101723],"is_not":false,"summary":null,"term":"GO:0046964"}]},"cv_name":"molecular_function","definition":"Enables the transfer of 3'-phosphoadenosine 5'-phosphosulfate, a naturally occurring mixed anhydride synthesized from adenosine 5'-phosphosulfate, from one side of a membrane to the other.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenine nucleotide transmembrane transporter activity","termid":"GO:0000295"},{"relation_name":"is_a","term_name":"purine ribonucleotide transmembrane transporter activity","termid":"GO:0005346"},{"relation_name":"is_a","term_name":"organic anion transmembrane transporter activity","termid":"GO:0008514"},{"relation_name":"is_a","term_name":"sulfur compound transmembrane transporter activity","termid":"GO:1901682"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03334":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"3'-phosphoadenosine 5'-phosphosulfate transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-741449"],"synonyms":[{"name":"3'-phosphoadenosine 5'-phosphosulphate transporter activity","type":"exact"},{"name":"PAPS transporter activity","type":"exact"},{"name":"adenosine 3'-phosphate 5'-phosphosulfate transmembrane transporter activity","type":"exact"}],"termid":"GO:0046964","terms_by_termid":{"GO:0046964":null}}


id: PBO:0050353
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 56","termid":"PBO:0050353"}


id: GO:0160241
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a cardiolipin + NAD+ = a diphosphatidylglycerone + NADH + H+.","definition_xrefs":["PMID:26338420","RHEA:81091"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"cardiolipin dehydrogenase (NAD+) activity","termid":"GO:0160241"}


id: MONDO:0006682
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inflammatory process affecting the brachial plexus. It results in severe pain in the upper extremity and shoulder, upper arm weakness and loss of sensation in the upper arm.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuritis","termid":"MONDO:0002122"},{"relation_name":"is_a","term_name":"brachial plexus neuropathy","termid":"MONDO:0006683"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"brachial plexus neuritis","secondary_identifiers":["DOID:3689","NCIT:C84600","EFO:1000843","SCTID:26609002","ICD9:723.4","MESH:D020968","MedDRA:10073002","SCTID:72893007","MEDGEN:113170","UMLS:C0221759"],"synonyms":[{"name":"acute brachial neuritis","type":"related"},{"name":"acute brachial neuritis syndrome","type":"related"},{"name":"acute brachial radiculitis syndrome","type":"related"},{"name":"acute shoulder neuritis","type":"related"},{"name":"brachial nerve plexus neuritis","type":"exact"},{"name":"brachial neuritis","type":"exact"},{"name":"idiopathic neuralgic amyotrophy","type":"related"},{"name":"neuritis of brachial nerve plexus","type":"exact"},{"name":"parsonage Turner syndrome","type":"related"},{"name":"parsonage-Aldren-Turner syndrome","type":"exact"}],"termid":"MONDO:0006682","xrefs":{"Monarch":{"xref_id":"0006682"}}}


id: GO:0043237
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to laminin-1, a glycoprotein trimer with the subunit composition alpha1, beta1, gamma1.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"laminin binding","termid":"GO:0043236"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"laminin-1 binding","synonyms":[{"name":"laminin-111 binding","type":"exact"}],"termid":"GO:0043237"}


id: GO:0030180
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Exchange diffusion of two solutes between the inside and outside of a cell or subcellular compartment, in which movement of one solute down a concentration gradient drives movement of the other solute in the opposite direction.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete solute:solute exchange (obsolete GO:0030180)","synonyms":[{"name":"solute:solute exchange","type":"exact"}],"termid":"GO:0030180"}


id: GO:1900867
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving sarcinapterin.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tricarboxylic acid metabolic process","termid":"GO:0072350"},{"relation_name":"is_a","term_name":"methanopterin-containing compound metabolic process","termid":"GO:2001115"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"sarcinapterin metabolic process","synonyms":[{"name":"sarcinapterin metabolism","type":"exact"}],"termid":"GO:1900867"}


id: PBO:0074739
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 99","termid":"PBO:0074739"}


id: PBO:0088340
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ski complex/exosome interacting GTPase Ski7","termid":"PBO:0088340"}


id: GO:0010507
data:
  {"annotated_genes":["SJAG_03371","SJAG_02723","SJAG_00457"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72918,76642],"is_not":false,"summary":null,"term":"GO:0010507"},{"annotations":[107024],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016242"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of autophagy. Autophagy is the process in which cells digest parts of their own cytoplasm.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of catabolic process","termid":"GO:0009895"},{"relation_name":"is_a","term_name":"regulation of autophagy","termid":"GO:0010506"},{"relation_name":"negatively_regulates","term_name":"autophagy","termid":"GO:0006914"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00457":null,"SJAG_02723":null,"SJAG_03371":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006914"},{"rel_name":"negatively_regulates","termid":"GO:0006914"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006914"],"is_obsolete":false,"name":"negative regulation of autophagy","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0010507","terms_by_termid":{"GO:0010507":null,"GO:0016242":null}}


id: PBO:0053697
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 898","termid":"PBO:0053697"}


id: GO:1900569
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of chanoclavine-I aldehyde. Chanoclavine-I aldehyde is at a branching point in the biosynthetic pathways of fumigaclavine C and ergotamine.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ergot alkaloid biosynthetic process","termid":"GO:0035837"},{"relation_name":"is_a","term_name":"aldehyde biosynthetic process","termid":"GO:0046184"},{"relation_name":"is_a","term_name":"olefinic compound biosynthetic process","termid":"GO:0120255"},{"relation_name":"is_a","term_name":"chanoclavine-I aldehyde metabolic process","termid":"GO:1900567"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"chanoclavine-I aldehyde biosynthetic process","synonyms":[{"name":"chanoclavine-I aldehyde anabolism","type":"exact"},{"name":"chanoclavine-I aldehyde biosynthesis","type":"exact"},{"name":"chanoclavine-I aldehyde formation","type":"exact"},{"name":"chanoclavine-I aldehyde synthesis","type":"exact"}],"termid":"GO:1900569"}


id: GO:0002763
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of myeloid leukocyte differentiation.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of myeloid leukocyte differentiation","termid":"GO:0002761"},{"relation_name":"is_a","term_name":"positive regulation of myeloid cell differentiation","termid":"GO:0045639"},{"relation_name":"is_a","term_name":"positive regulation of leukocyte differentiation","termid":"GO:1902107"},{"relation_name":"positively_regulates","term_name":"myeloid leukocyte differentiation","termid":"GO:0002573"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of myeloid leukocyte differentiation","synonyms":[{"name":"activation of myeloid leukocyte differentiation","type":"narrow"},{"name":"stimulation of myeloid leukocyte differentiation","type":"narrow"},{"name":"up regulation of myeloid leukocyte differentiation","type":"exact"},{"name":"up-regulation of myeloid leukocyte differentiation","type":"exact"},{"name":"upregulation of myeloid leukocyte differentiation","type":"exact"}],"termid":"GO:0002763"}


id: PBO:0038624
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"apoptotic chromatin condensation inducer 1","termid":"PBO:0038624"}


id: PBO:0111868
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-ZZ type","termid":"PBO:0111868"}


id: GO:0097510
data:
  {"annotated_genes":["SJAG_02528"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[78623],"is_not":false,"summary":null,"term":"GO:0097510"}]},"cv_name":"biological_process","definition":"A base-excision repair, AP site formation process occurring via excision of a deaminated base.","definition_xrefs":["GOC:al","PMID:18789404"],"direct_ancestors":[{"relation_name":"is_a","term_name":"base-excision repair, AP site formation","termid":"GO:0006285"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02528":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006281"}],"interesting_parent_ids":["GO:0008150","GO:0006281","GO:0006259"],"is_obsolete":false,"name":"base-excision repair, AP site formation via deaminated base removal","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0097510","terms_by_termid":{"GO:0097510":null}}


id: MONDO:1012482
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"cervical vertebral compressive myelopathy, non-human animal","termid":"MONDO:1011891"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cervical vertebral compressive myelopathy, sheep","secondary_identifiers":["OMIA:001894-9940"],"termid":"MONDO:1012482","xrefs":{"Monarch":{"xref_id":"1012482"}}}


id: GO:0014832
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which force is generated within smooth muscle tissue, resulting in a change in muscle geometry. This process occurs in the urinary bladder. Force generation involves a chemo-mechanical energy conversion step that is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. The urinary bladder is a musculomembranous sac along the urinary tract.","definition_xrefs":["GOC:mtg_muscle","PMID:18276178","PMID:538956","GOC:mr","PMID:11768524"],"direct_ancestors":[{"relation_name":"is_a","term_name":"urinary tract smooth muscle contraction","termid":"GO:0014848"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"urinary bladder smooth muscle contraction","termid":"GO:0014832"}


id: PR:O74760
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A eukaryotic translation initiation factor 3 subunit A that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR14005:SF0","OMA:SCHPO03656","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 3 subunit A (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC17D11.05","secondary_identifiers":["UniProtKB:O74760"],"synonyms":[{"name":"Spom972h-EIF3A","type":"exact"},{"name":"eIF3 p110 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"eIF3a (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"eukaryotic translation initiation factor 3 110 kDa subunit (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"translation initiation factor eIF3, p110 subunit (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74760"}


id: PBO:0081717
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 646","termid":"PBO:0081717"}


id: PBO:0062259
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily D member 15 pseudogene","termid":"PBO:0062259"}


id: GO:0010274
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Growth or movement in a sessile organism toward or away from water, as of the roots of a plant.","definition_xrefs":["ISBN:0395825172"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tropism","termid":"GO:0009606"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hydrotropism","secondary_identifiers":["Wikipedia:Hydrotropism"],"termid":"GO:0010274"}


id: PBO:0005756
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L15 (predicted)","termid":"PBO:0005756"}


id: PBO:0013005
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase allele types","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nonsense_mutation","termid":"PBO:0013005"}


id: GO:1990582
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. The temporary binding of a protein or protein complex to the membrane of an intracellular membrane-bounded organelle.","definition_xrefs":["PMID:9538255","PMID:16100119"],"gene_count":0,"genotype_count":0,"name":"obsolete intracellular membrane-bounded organelle binding (obsolete GO:1990582)","synonyms":[{"name":"intracellular membrane-bounded organelle binding","type":"exact"},{"name":"intracellular membrane-enclosed organelle binding","type":"exact"}],"termid":"GO:1990582"}


id: PBO:0059516
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrially encoded L-strand promoter","termid":"PBO:0059516"}


id: PBO:0060002
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4L pseudogene 22","termid":"PBO:0060002"}


id: PBO:0089854
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome methytransferase involved in ribosome assembly Hpm1","termid":"PBO:0089854"}


id: GO:0032215
data:
  {"annotated_genes":["SJAG_03624"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97541],"is_not":false,"summary":null,"term":"GO:0032215"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the semi-conservative replication of telomeric DNA.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of telomere maintenance","termid":"GO:0032206"},{"relation_name":"is_a","term_name":"regulation of telomere maintenance via semi-conservative replication","termid":"GO:0032213"},{"relation_name":"is_a","term_name":"positive regulation of cell cycle process","termid":"GO:0090068"},{"relation_name":"positively_regulates","term_name":"telomere maintenance via semi-conservative replication","termid":"GO:0032201"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03624":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006259"},{"rel_name":"positively_regulates","termid":"GO:0032200"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0032200"}],"interesting_parent_ids":["GO:0008150","GO:0007049","GO:0006259","GO:0032200"],"is_obsolete":false,"name":"positive regulation of telomere maintenance via semi-conservative replication","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of telomere maintenance via semi-conservative replication","type":"narrow"},{"name":"stimulation of telomere maintenance via semi-conservative replication","type":"narrow"},{"name":"up regulation of telomere maintenance via semi-conservative replication","type":"exact"},{"name":"up-regulation of telomere maintenance via semi-conservative replication","type":"exact"},{"name":"upregulation of telomere maintenance via semi-conservative replication","type":"exact"}],"termid":"GO:0032215","terms_by_termid":{"GO:0032215":null}}


id: FYPO:0001564
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-ornithine measured in a cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cellular amino acid level","termid":"FYPO:0003985"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"decreased cellular ornithine level","secondary_identifiers":["FYPO:0001618"],"synonyms":[{"name":"decreased cellular L-ornithine level","type":"exact"},{"name":"decreased cellular ornithine level during mitotic cell cycle","type":"related"},{"name":"decreased cellular ornithine level during vegetative growth","type":"exact"},{"name":"decreased ornithine accumulation","type":"related"},{"name":"reduced cellular ornithine level","type":"exact"}],"termid":"FYPO:0001564"}


id: PR:Q9P6N9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A post-GPI attachment to proteins factor 3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR13148:SF0","OMA:SCHPO01083","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein PER1 homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC823.07","secondary_identifiers":["UniProtKB:Q9P6N9"],"synonyms":[{"name":"Spom972h-PGAP3","type":"exact"}],"termid":"PR:Q9P6N9"}


id: FYECO:0000033
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which cadmium ions were added to the assay buffer in excess compared to standard assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"+ ions","termid":"FYECO:0000030"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ Cd ions","synonyms":[{"name":"cadmium ions added","type":"exact"}],"termid":"FYECO:0000033"}


id: GO:0140713
data:
  {"annotated_genes":["SJAG_02906","SJAG_03128","SJAG_02348","SJAG_02416","SJAG_02198","SJAG_04758","SJAG_04670","SJAG_00914","SJAG_03867","SJAG_00170","SJAG_04561","SJAG_00913","SJAG_01005","SJAG_02314","SJAG_04692","SJAG_00942","SJAG_02035","SJAG_02439","SJAG_04038","SJAG_04547","SJAG_04257","SJAG_02571","SJAG_03905","SJAG_00925","SJAG_00259","SJAG_02698","SJAG_03366","SJAG_04272"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[89190,90434,95685,103273,110042,111563],"is_not":false,"summary":null,"term":"GO:0140713"},{"annotations":[88343],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140849"},{"annotations":[103929,96813,94976],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140665"},{"annotations":[113466],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140674"},{"annotations":[108480,113990,98506,111660,117291],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000511"},{"annotations":[118349,108104,115464,109156,95196,114928,110606,113192,95440,92746,95813,109161],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000510"}]},"cv_name":"molecular_function","definition":"Binding to and carrying a histone or a histone complex to unload or deposit it as a nucleosome. The histone can be newly synthesized or result from nucleosome disassembly (either spontaneously, or by a histone chaperone).","definition_xrefs":["PMID:26459557"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein carrier chaperone","termid":"GO:0140597"}],"gene_count":28,"genes_by_uniquename":{"SJAG_00170":null,"SJAG_00259":null,"SJAG_00913":null,"SJAG_00914":null,"SJAG_00925":null,"SJAG_00942":null,"SJAG_01005":null,"SJAG_02035":null,"SJAG_02198":null,"SJAG_02314":null,"SJAG_02348":null,"SJAG_02416":null,"SJAG_02439":null,"SJAG_02571":null,"SJAG_02698":null,"SJAG_02906":null,"SJAG_03128":null,"SJAG_03366":null,"SJAG_03867":null,"SJAG_03905":null,"SJAG_04038":null,"SJAG_04257":null,"SJAG_04272":null,"SJAG_04547":null,"SJAG_04561":null,"SJAG_04670":null,"SJAG_04692":null,"SJAG_04758":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140104"},{"rel_name":"is_a","termid":"GO:0140597"}],"interesting_parent_ids":["GO:0140597","GO:0003674","GO:0140104"],"is_obsolete":false,"name":"histone chaperone activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-9822185"],"synonyms":[{"name":"histone carrier activity","type":"exact"},{"name":"nucleosome remodeling activity","type":"related"}],"termid":"GO:0140713","terms_by_termid":{"GO:0000510":null,"GO:0000511":null,"GO:0140665":null,"GO:0140674":null,"GO:0140713":null,"GO:0140849":null}}


id: MONDO:0010692
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear ribonucleic acid","secondary_identifiers":["UMLS:C1839581","MEDGEN:374259","OMIM:310650"],"synonyms":[{"name":"nRNA","type":"related"},{"name":"nuclear ribonucleic acid","type":"exact"}],"termid":"MONDO:0010692","xrefs":{"Monarch":{"xref_id":"0010692"}}}


id: GO:0036162
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of oxytocin, a cyclic nonapeptide hormone with amino acid sequence CYIQNCPLG, due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels. Oxytocin is the principal uterine-contracting and milk-ejecting hormone of the posterior pituitary, and together with the neuropeptide vasopressin, is believed to influence social cognition and behavior. It also acts as a neurotransmitter in the brain.","definition_xrefs":["Wikipedia:Oxytocin","GOC:cjm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gene expression","termid":"GO:0010467"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"oxytocin production","synonyms":[{"name":"oxytocin biosynthesis","type":"narrow"},{"name":"oxytocin secretion","type":"narrow"}],"termid":"GO:0036162"}


id: MONDO:0001449
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A form of meningitis caused by lymphocytic choriomeningitis virus. mice and other rodents serve as the natural hosts, and infection in humans usually occurs through inhalation or ingestion of infectious particles. Clinical manifestations include an influenza-like syndrome followed by stiff neck, alterations of mentation, ataxia, and incontinence. Maternal infections may result in fetal malformations and injury, including neonatal hydrocephalus, aqueductal stenosis, chorioretinitis, and microcephaly. (From Joynt, Clinical Neurology, 1996, Ch26, pp1-3)","definition_xrefs":["MESH:D008216"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Arenaviridae infectious disease","termid":"MONDO:0005650"},{"relation_name":"is_a","term_name":"viral meningitis","termid":"MONDO:0007015"},{"relation_name":"is_a","term_name":"viral infection of central nervous system","termid":"MONDO:0024318"},{"relation_name":"is_a","term_name":"vector-borne disease","termid":"MONDO:0100120"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lymphocytic choriomeningitis","secondary_identifiers":["ICD9:049.0","MEDGEN:44220","UMLS:C0024266","ICD10CM:A87.2","DOID:12155","icd11.foundation:307264938"],"synonyms":[{"name":"LCM","type":"exact"},{"name":"lymphocytic choriomeningitis mammarenavirus caused infectious meningitis","type":"exact"},{"name":"lymphocytic choriomeningitis mammarenavirus infectious meningitis","type":"exact"},{"name":"lymphocytic choriomeningitis virus encephalomyelitis","type":"exact"},{"name":"lymphocytic meningitis","type":"broad"},{"name":"lymphocytic meningoencephalitis","type":"exact"}],"termid":"MONDO:0001449","xrefs":{"Monarch":{"xref_id":"0001449"}}}


id: SO:0001395
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A post translationally modified methionine amino acid feature.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified_amino_acid_feature","termid":"SO:0001385"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"modified_L_methionine","secondary_identifiers":["MOD:00913"],"synonyms":[{"name":"ModMet","type":"exact"},{"name":"modified L methionine","type":"exact"},{"name":"modified L-methionine","type":"exact"}],"termid":"SO:0001395"}


id: PBO:0117068
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OTP antisense RNA 1","termid":"PBO:0117068"}


id: PBO:0074326
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2","termid":"PBO:0074326"}


id: PBO:0079866
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uracil-DNA glycosylase pseudogene 3","termid":"PBO:0079866"}


id: PBO:0086685
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; identified by SAGE","termid":"PBO:0086685"}


id: GO:1903153
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Any ferrous iron transmembrane transporter activity that is involved in ferrous iron import into cell.","definition_xrefs":["GOC:TermGenie","ISBN:0-8249-3695-6","GO_REF:0000061","GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete ferrous iron transmembrane transporter activity involved in ferrous iron import into cell (obsolete GO:1903153)","synonyms":[{"name":"ferrous iron transmembrane transporter activity involved in ferrous ion import into cell","type":"exact"},{"name":"ferrous iron transmembrane transporter activity involved in ferrous iron import into cell","type":"exact"}],"termid":"GO:1903153"}


id: GO:0090688
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The part of the cleavage furrow closest to the cell surface.","definition_xrefs":["GOC:vw","PMID:27082518"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"cleavage furrow","termid":"GO:0032154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005575","GO:0005886"],"is_obsolete":false,"name":"cleavage furrow rim","termid":"GO:0090688"}


id: GO:0001978
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that modulates blood pressure by sensing the amount of stretch occurring in large arteries and responding to the input via central nervous system control.","definition_xrefs":["ISBN:0721643949","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system process involved in regulation of systemic arterial blood pressure","termid":"GO:0001976"},{"relation_name":"part_of","term_name":"regulation of systemic arterial blood pressure by baroreceptor feedback","termid":"GO:0003025"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of systemic arterial blood pressure by carotid sinus baroreceptor feedback","synonyms":[{"name":"baroreceptor feedback control of blood pressure","type":"related"},{"name":"baroreceptor pressure buffer system","type":"related"},{"name":"carotid sinus baroreceptor feedback regulation of systemic arterial blood pressure","type":"exact"}],"termid":"GO:0001978"}


id: PBO:0063588
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxisomal biogenesis factor 3","termid":"PBO:0063588"}


id: GO:1901324
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a trichodermin stimulus.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to ether","termid":"GO:0045472"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to trichodermin","termid":"GO:1901324"}


id: PBO:0010216
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"related to S. pombe SPAC521.02 and S. cerevisiae YHR134W, but has an additional N-terminal ubiquitin family domain","termid":"PBO:0010216"}


id: GO:0006608
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a small nuclear ribonucleoprotein from the cytoplasm into the nucleus, across the nuclear membrane.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete snRNP protein import into nucleus (obsolete GO:0006608)","synonyms":[{"name":"snRNP protein import into cell nucleus","type":"exact"},{"name":"snRNP protein transport from cytoplasm to nucleus","type":"exact"},{"name":"snRNP protein-nucleus import","type":"exact"}],"termid":"GO:0006608"}


id: PR:P78926
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- map1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P78926"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pheromone receptor transcription activator (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC11E3.06","synonyms":[{"name":"Spom972h-map1","type":"exact"},{"name":"protein map1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P78926"}


id: MONDO:0042458
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An disease or disorder caused by infection with Trichinella spiralis.","definition_xrefs":["MONDO:patterns/specific_infectious_disease_by_agent"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trichinellosis","termid":"MONDO:0019444"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"Trichinella spiralis infectious disease","secondary_identifiers":["MEDGEN:854509","SCTID:88264003","UMLS:C3887668"],"synonyms":[{"name":"Trichinella spiralis caused disease or disorder","type":"exact"},{"name":"Trichinella spiralis disease or disorder","type":"exact"},{"name":"infection by larvae of Trichinella spiralis","type":"exact"},{"name":"infection caused by larvae of Trichinella spiralis","type":"related"},{"name":"trichinelliasis caused by Trichinella spiralis","type":"related"},{"name":"trichinellosis caused by Trichinella spiralis","type":"related"},{"name":"trichiniasis caused by Trichinella spiralis","type":"related"},{"name":"trichinosis caused by Trichinella spiralis","type":"related"}],"termid":"MONDO:0042458","xrefs":{"Monarch":{"xref_id":"0042458"}}}


id: PBO:0082264
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Aminopeptidase yscII; may have a role in obtaining leucine from dipeptide substrates; APE2 has a paralog, AAP1, that arose from the whole genome duplication","termid":"PBO:0082264"}


id: MONDO:0012511
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A female reproductive system disease characterized by rupture of chorioamniotic membranes before 37 weeks of gestation.","definition_xrefs":["DOID:0111144"],"direct_ancestors":[{"relation_name":"is_a","term_name":"female reproductive system disorder","termid":"MONDO:0002263"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"preterm premature rupture of the membranes","secondary_identifiers":["SCTID:312974005","MEDGEN:147582","NCIT:C92862","UMLS:C0729264","MESH:C563032","OMIM:610504"],"synonyms":[{"name":"PPROM","type":"exact"},{"name":"preterm premature rupture of the membranes","type":"exact"},{"name":"preterm premature rupture of the membranes, susceptibility to","type":"exact"}],"termid":"MONDO:0012511","xrefs":{"Monarch":{"xref_id":"0012511"}}}


id: FYPO:0007558
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing econazole.","definition_xrefs":["PMID:33223513","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002057"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0002057","FYPO:0000003","FYPO:0002058","FYPO:0000139","FYPO:0002060"],"is_obsolete":false,"name":"normal growth on econazole","synonyms":[{"name":"normal cell population growth in presence of econazole","type":"exact"},{"name":"normal cell population growth on ECZ","type":"exact"},{"name":"normal cell population growth on econazole","type":"exact"},{"name":"normal cellular response to econazole","type":"related"},{"name":"normal vegetative cell population growth on econazole","type":"exact"}],"termid":"FYPO:0007558"}


id: PBO:0042854
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cilia and flagella associated protein 68","termid":"PBO:0042854"}


id: MONDO:0850473
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A diffuse large B-cell lymphoma that is characterized by aneuploidy with TP53 inactivation.","definition_xrefs":["DOID:0081069"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diffuse large B-cell lymphoma","termid":"MONDO:0018905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"A53 diffuse large B-cell lymphoma","secondary_identifiers":["NCIT:C187447","UMLS:C5707085","MEDGEN:1815990"],"termid":"MONDO:0850473","xrefs":{"Monarch":{"xref_id":"0850473"}}}


id: PATO:0000593
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000593 absolute volume value (obsolete PATO:0000593)","termid":"PATO:0000593"}


id: GO:0043668
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The outer layer of the pollen grain wall which is composed primarily of sporopollenin.","direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"pollen wall","termid":"GO:0043667"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"exine","termid":"GO:0043668"}


id: PBO:0082821
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Conserved NAPDH-dependent diflavin reductase; component of an early step in the cytosolic Fe-S protein assembly (CIA) machinery; transfers electrons from NADPH to the Fe-S cluster of Dre2p; plays a pro-death role under oxidative stress; Tah18p-dependent nitric oxide synthesis confers high-temperature stress tolerance; possible target for development of antifungal drugs","termid":"PBO:0082821"}


id: PBO:0089659
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CENP-T histone fold, kinetochore scaffold protein","termid":"PBO:0089659"}


id: GO:0042652
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The peripheral segment of respiratory chain complex I located in the mitochondrion. Respiratory chain complex I is an enzyme of the respiratory chain, consisting of at least 34 polypeptide chains. The electrons of NADH enter the chain at this complex. The complete complex is L-shaped, with a horizontal arm lying in the membrane and a vertical arm that projects into the matrix.","definition_xrefs":["GOC:mtg_sensu","ISBN:0716749556","GOC:jid"],"gene_count":0,"genotype_count":0,"name":"obsolete mitochondrial respiratory chain complex I, peripheral segment (obsolete GO:0042652)","synonyms":[{"name":"NADH dehydrogenase (ubiquinone) complex, peripheral segment","type":"broad"},{"name":"NADH-Q oxidoreductase complex, peripheral segment","type":"broad"}],"termid":"GO:0042652"}


id: PBO:0089151
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi nucleoside-diphosphatase Gda1","termid":"PBO:0089151"}


id: PBO:0038542
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"abhydrolase domain containing 15","termid":"PBO:0038542"}


id: GO:0102674
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 24-methylenelophenol + a demethylated methyl acceptor = 9xi-episterol + a methylated methyl acceptor.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete C4-demethylase activity (obsolete GO:0102674)","termid":"GO:0102674"}


id: PBO:0073847
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 9 member A2","termid":"PBO:0073847"}


id: PBO:0078176
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta joining 2-1","termid":"PBO:0078176"}


id: PBO:0028407
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_biotin_import","termid":"PBO:0028407"}


id: MONDO:0016521
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Muscular pseudohypertrophy - hypothyroidism, also known as Kocher-Debre-Semelaigne syndrome is a rare disorder characterized by pseudohypertrophy of muscles due to longstanding hypothyroidism.","definition_xrefs":["Orphanet:2349"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"endocrine system disorder","termid":"MONDO:0005151"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"muscular pseudohypertrophy-hypothyroidism syndrome","secondary_identifiers":["GARD:8270","SCTID:716338001","UMLS:C0270958","MEDGEN:82860"],"synonyms":[{"name":"Hoffman syndrome","type":"related"},{"name":"Kocher-Debre-Semelaigne syndrome","type":"exact"},{"name":"Kocher-Debré-Semelaigne syndrome","type":"exact"}],"termid":"MONDO:0016521","xrefs":{"Monarch":{"xref_id":"0016521"}}}


id: PBO:0069357
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 617, pseudogene","termid":"PBO:0069357"}


id: GO:0080149
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the rate of translation as a result of increase in sucrose level.","definition_xrefs":["PMID:19403731"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of translation in response to stress","termid":"GO:0032055"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"sucrose induced translational repression","synonyms":[{"name":"negative regulation of translation in response to sucrose","type":"exact"}],"termid":"GO:0080149"}


id: PBO:0073179
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"selenoprotein K pseudogene 1","termid":"PBO:0073179"}


id: GO:0071159
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of a homo- or heterodimer of members of a family of structurally related proteins that contain a conserved N-terminal region called the Rel homology domain (RHD). In the nucleus, NF-kappaB complexes act as transcription factors. In unstimulated cells, NF-kappaB dimers are sequestered in the cytoplasm by IkappaB monomers; signals that induce NF-kappaB activity cause degradation of IkappaB, allowing NF-kappaB dimers to translocate to the nucleus and induce gene expression.","definition_xrefs":["ISBN:0849327946"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005634"],"is_obsolete":false,"name":"NF-kappaB complex","termid":"GO:0071159"}


id: MONDO:0017358
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete organic aciduria (obsolete MONDO:0017358)","termid":"MONDO:0017358","xrefs":{"Monarch":{"xref_id":"0017358"}}}


id: PBO:0017721
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heavy metal ion homeostasis protein Bsd2 (predicted)","termid":"PBO:0017721"}


id: MONDO:0043254
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"urticaria","termid":"MONDO:0005492"},{"relation_name":"is_a","term_name":"vesiculobullous skin disease","termid":"MONDO:0006617"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"papular urticaria","secondary_identifiers":["SCTID:55608001","icd11.foundation:1014677494","MEDGEN:78091","MESH:C537169","UMLS:C0263352"],"synonyms":[{"name":"bullous papular urticaria - type","type":"related"},{"name":"lichen urticatus","type":"related"},{"name":"papular urticaria","type":"exact"},{"name":"prurigo simplex","type":"exact"},{"name":"strophulus","type":"related"},{"name":"urticaria papulosa of hebra","type":"related"}],"termid":"MONDO:0043254","xrefs":{"Monarch":{"xref_id":"0043254"}}}


id: GO:0051704
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A biological process which involves another organism of the same or different species.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete multi-organism process (obsolete GO:0051704)","synonyms":[{"name":"interaction between organisms","type":"exact"},{"name":"physiological interaction between organisms","type":"exact"},{"name":"physiological interaction with other organism","type":"exact"}],"termid":"GO:0051704"}


id: GO:1904550
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an arachidonic acid stimulus.","definition_xrefs":["GO_REF:0000071","GOC:TermGenie","PMID:16382163"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to fatty acid","termid":"GO:0070542"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to arachidonate","synonyms":[{"name":"response to arachidonic acid","type":"exact"}],"termid":"GO:1904550"}


id: GO:0060242
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which information about the density of cells in a population is received by direct cell-cell contact and is converted into a molecular signal, resulting in the cessation of cell growth or proliferation.","definition_xrefs":["GOC:dph","PMID:17376520"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of cell density","termid":"GO:0060245"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"contact inhibition","secondary_identifiers":["GO:0060246","GO:0060248","Wikipedia:Contact_inhibition"],"synonyms":[{"name":"detection of cell density by contact stimulus","type":"related"},{"name":"detection of cell density by contact stimulus involved in contact inhibition","type":"related"}],"termid":"GO:0060242"}


id: GO:0006614
data:
  {"annotated_genes":["SJAG_04129","SJAG_02330","SJAG_00959","SJAG_00175","SJAG_03411","SJAG_01282","SJAG_01840","SJAG_00064","SJAG_03684","SJAG_01558","SJAG_02456","SJAG_00360","SJAG_01759","SJAG_02208"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[66605,69337,70318,73365,94643],"is_not":false,"summary":null,"term":"GO:0006614"},{"annotations":[91993,114751,115513],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006617"},{"annotations":[108689,74054,73561,98410,102945,75791],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006616"}]},"cv_name":"biological_process","definition":"The targeting of proteins to a membrane that occurs during translation and is dependent upon two key components, the signal-recognition particle (SRP) and the SRP receptor. SRP is a cytosolic particle that transiently binds to the endoplasmic reticulum (ER) signal sequence in a nascent protein, to the large ribosomal unit, and to the SRP receptor in the ER membrane.","definition_xrefs":["ISBN:0716731363"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cotranslational protein targeting to membrane","termid":"GO:0006613"},{"relation_name":"is_a","term_name":"protein targeting to ER","termid":"GO:0045047"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00064":null,"SJAG_00175":null,"SJAG_00360":null,"SJAG_00959":null,"SJAG_01282":null,"SJAG_01558":null,"SJAG_01759":null,"SJAG_01840":null,"SJAG_02208":null,"SJAG_02330":null,"SJAG_02456":null,"SJAG_03411":null,"SJAG_03684":null,"SJAG_04129":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006605"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006605","GO:0051179"],"is_obsolete":false,"name":"SRP-dependent cotranslational protein targeting to membrane","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-1799339"],"synonyms":[{"name":"ER translocation","type":"broad"},{"name":"SRP-dependent cotranslational membrane targeting","type":"exact"},{"name":"SRP-dependent cotranslational protein-membrane targeting","type":"exact"}],"termid":"GO:0006614","terms_by_termid":{"GO:0006614":null,"GO:0006616":null,"GO:0006617":null}}


id: PBO:0078365
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Glu (anticodon TTC) 9-1","termid":"PBO:0078365"}


id: GO:0000339
data:
  {"annotated_genes":["SJAG_04360","SJAG_01064","SJAG_03223","SJAG_05010","SJAG_00507","SJAG_01830","SJAG_01625"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[70828],"is_not":false,"summary":null,"term":"GO:0000339"},{"annotations":[91921],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098808"},{"annotations":[65733,100138,75198,74486,80037],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000340"}]},"cv_name":"molecular_function","definition":"Binding to a 7-methylguanosine (m7G) group or derivative located at the 5' end of an RNA molecule.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA binding","termid":"GO:0003723"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00507":null,"SJAG_01064":null,"SJAG_01625":null,"SJAG_01830":null,"SJAG_03223":null,"SJAG_04360":null,"SJAG_05010":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0003723"],"is_obsolete":false,"name":"RNA cap binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"binding to mRNA cap","type":"narrow"},{"name":"mRNA cap binding","type":"narrow"},{"name":"snRNA cap binding","type":"narrow"}],"termid":"GO:0000339","terms_by_termid":{"GO:0000339":null,"GO:0000340":null,"GO:0098808":null}}


id: MONDO:0006204
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete extramammary Paget disease (obsolete MONDO:0006204)","termid":"MONDO:0006204","xrefs":{"Monarch":{"xref_id":"0006204"}}}


id: PBO:0082559
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ceramide synthase component; involved in synthesis of ceramide from C26(acyl)-coenzyme A and dihydrosphingosine or phytosphingosine, functionally equivalent to Lac1p; forms ER foci upon DNA replication stress; homolog of human CERS2, a tumor metastasis suppressor gene whose silencing enhances invasion/metastasis of prostate cancer cells; LAG1 has a paralog, LAC1, that arose from the whole genome duplication","termid":"PBO:0082559"}


id: GO:0016638
data:
  {"annotated_genes":["SJAG_03266","SJAG_03861","SJAG_01881","SJAG_00707","SJAG_02496","SJAG_04054"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[80757],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003884"},{"annotations":[73420],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004354"},{"annotations":[72621],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016040"},{"annotations":[74578],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004375"},{"annotations":[115134],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043799"},{"annotations":[59853],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016639"},{"annotations":[76130,112210],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004733"}]},"cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which a CH-NH2 group acts as a hydrogen or electron donor and reduces a hydrogen or electron acceptor.","definition_xrefs":["EC:1.4.-.-","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity","termid":"GO:0016491"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00707":null,"SJAG_01881":null,"SJAG_02496":null,"SJAG_03266":null,"SJAG_03861":null,"SJAG_04054":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"oxidoreductase activity, acting on the CH-NH2 group of donors","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"oxidoreductase activity, acting on the CH-NH2 group of donors, other acceptors","type":"narrow"}],"termid":"GO:0016638","terms_by_termid":{"GO:0003884":null,"GO:0004354":null,"GO:0004375":null,"GO:0004733":null,"GO:0016040":null,"GO:0016639":null,"GO:0043799":null}}


id: GO:0003088
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the secretion of epinephrine into the bloodstream modulates the force of heart muscle contraction.","definition_xrefs":["GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of the force of heart contraction by epinephrine","termid":"GO:0003059"},{"relation_name":"part_of","term_name":"positive regulation of the force of heart contraction by circulating epinephrine-norepinephrine","termid":"GO:0003089"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of the force of heart contraction by circulating epinephrine","synonyms":[{"name":"increased force of heart contraction by circulating adrenaline","type":"related"},{"name":"increased force of heart contraction by epinephrine in the bloodstream","type":"exact"},{"name":"positive regulation of heart contraction by circulating adrenaline","type":"related"},{"name":"positive regulation of heart contraction by circulating epinephrine","type":"related"}],"termid":"GO:0003088"}


id: PBO:0091157
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"guanine/xanthine/hypoxanthine phosphoribosyltransferase Hpt1","termid":"PBO:0091157"}


id: PBO:0070122
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 36 pseudogene","termid":"PBO:0070122"}


id: PATO:0000172
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000172 relative yield (obsolete PATO:0000172)","termid":"PATO:0000172"}


id: PATO:0002298
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A cellular motility which is higher relative to the normal or average.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"cellular motility","termid":"PATO:0001488"},{"relation_name":"is_a","term_name":"increased object quality","termid":"PATO:0002305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased cellular motility","termid":"PATO:0002298"}


id: MONDO:0859278
data:
  {"annotated_genes":["SJAG_05194"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86232],"is_not":false,"summary":null,"term":"MONDO:0859278"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05194":null},"genotype_count":0,"is_obsolete":false,"name":"keratoderma-ichthyosis-deafness syndrome, autosomal recessive","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1823973","OMIM:620009","UMLS:C5774200"],"termid":"MONDO:0859278","terms_by_termid":{"MONDO:0859278":null},"xrefs":{"Monarch":{"xref_id":"0859278"}}}


id: PBO:0087561
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of Slx5-Slx8 SUMO-targeted ubiquitin ligase (STUbL) complex; role in proteolysis of spindle positioning protein Kar9, DNA repair proteins Rad52p and Rad57p; stimulated by SUMO-modified substrates; contains a C-terminal RING domain; forms nuclear foci upon DNA replication stress; required for maintenance of genome integrity like human ortholog RNF","termid":"PBO:0087561"}


id: MOD:01982
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from RESID","definition_xrefs":["ChEBI:17750","PubMed:23978223","PubMed:23818633","RESID:AA0619"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methylated glycine","termid":"MOD:00714"},{"relation_name":"is_a","term_name":"alpha-amino trimethylated protonated-residue","termid":"MOD:01698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"N,N,N-trimethylglycine","synonyms":[{"name":"(trimethylammonio)ethanoic acid","type":"exact"},{"name":"1-carboxy-N,N,N-trimethylmethanazanium","type":"exact"},{"name":"2-trimethylammonioacetate","type":"exact"},{"name":"MOD_RES N,N,N-trimethylglycine","type":"exact"},{"name":"N,N,N-trimethylglycine cation","type":"exact"},{"name":"N,N,N-trimethylglycinium","type":"exact"},{"name":"N2Me3+Gly","type":"exact"},{"name":"betaine","type":"exact"},{"name":"carboxy-N,N,N-trimethylmethanaminium","type":"exact"},{"name":"carboxymethyl-trimethylazanium","type":"exact"},{"name":"glycine betaine","type":"exact"}],"termid":"MOD:01982"}


id: GO:0007631
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Behavior associated with the intake of food.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"behavior","termid":"GO:0007610"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"feeding behavior","secondary_identifiers":["GO:0044366","GO:0044372","GO:0044369","GO:0044370","GO:0044368","Wikipedia:List_of_feeding_behaviours","GO:0044367","GO:0044371"],"synonyms":[{"name":"behavioral response to food","type":"exact"},{"name":"behavioural response to food","type":"exact"},{"name":"eating","type":"narrow"},{"name":"feeding behaviour","type":"exact"},{"name":"feeding from phloem of other organism","type":"narrow"},{"name":"feeding from plant phloem","type":"narrow"},{"name":"feeding from tissue of other organism","type":"narrow"},{"name":"feeding from vascular tissue of another organism","type":"narrow"},{"name":"feeding from xylem of other organism","type":"narrow"},{"name":"feeding on or from other organism","type":"narrow"},{"name":"feeding on plant sap","type":"narrow"}],"termid":"GO:0007631"}


id: PBO:0002640
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.5.1.19","termid":"PBO:0002640"}


id: GO:0051933
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The uptake of amino acid neurotransmitters by neurons or glial cells. This process leads to inactivation and recycling of neurotransmitters.","definition_xrefs":["ISBN:0123668387"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid transport","termid":"GO:0006865"},{"relation_name":"is_a","term_name":"neurotransmitter reuptake","termid":"GO:0098810"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"amino acid neurotransmitter reuptake","synonyms":[{"name":"amino acid neurotransmitter import into glial cell","type":"narrow"},{"name":"amino acid neurotransmitter import into neuron","type":"narrow"},{"name":"amino acid neurotransmitter recycling","type":"broad"},{"name":"amino acid uptake during transmission of nerve impulse","type":"related"}],"termid":"GO:0051933"}


id: MONDO:8000015
data:
  {"annotated_genes":["SJAG_03077"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86190],"is_not":false,"summary":null,"term":"MONDO:8000015"}]},"cv_name":"mondo","definition":"Any 46,XY complete gonadal dysgenesis in which the cause of the disease is a mutation in the DHX37 gene.","definition_xrefs":["OMIM:273250","MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"46,XY complete gonadal dysgenesis","termid":"MONDO:0010765"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03077":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"46,XY sex reversal 11","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:78602","Orphanet:983","ICD9:752.89","MESH:C537770","GARD:16552","MedDRA:10002641","SCTID:53599007","UMLS:C0266427"],"synonyms":[{"name":"46, XY sex reversal 11","type":"exact"},{"name":"ETRS","type":"exact"},{"name":"SRXY11","type":"exact"},{"name":"TRS","type":"exact"},{"name":"XY gonadal agenesis syndrome","type":"related"},{"name":"anorchia, familial","type":"related"},{"name":"embryonic testicular regression syndrome","type":"exact"},{"name":"testicular regression syndrome","type":"exact"},{"name":"testicular regression, embryonic","type":"related"},{"name":"vanishing testes syndrome","type":"exact"},{"name":"vanishing testis syndrome","type":"exact"}],"termid":"MONDO:8000015","terms_by_termid":{"MONDO:8000015":null},"xrefs":{"Monarch":{"xref_id":"8000015"}}}


id: GO:0061172
data:
  {"annotated_genes":["SJAG_00845","SJAG_04522","SJAG_00317","SJAG_01373"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91325],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904846"},{"annotations":[112858,107983,104062],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061173"}]},"cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of the establishment of bipolar cell polarity. Bipolar organization is the organization that is a mirror image along an axis from a plane.","definition_xrefs":["GOC:dph","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of establishment of cell polarity","termid":"GO:2000114"},{"relation_name":"regulates","term_name":"establishment of bipolar cell polarity","termid":"GO:0061171"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00317":null,"SJAG_00845":null,"SJAG_01373":null,"SJAG_04522":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007163"}],"interesting_parent_ids":["GO:0008150","GO:0007163"],"is_obsolete":false,"name":"regulation of establishment of bipolar cell polarity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0061172","terms_by_termid":{"GO:0061173":null,"GO:1904846":null}}


id: MONDO:0008656
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete benign paroxysmal positional nystagmus (obsolete MONDO:0008656)","termid":"MONDO:0008656","xrefs":{"Monarch":{"xref_id":"0008656"}}}


id: PBO:0046933
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 50 member A","termid":"PBO:0046933"}


id: PBO:0046736
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exonuclease 3'-5' domain containing 2","termid":"PBO:0046736"}


id: PBO:0066495
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ret finger protein like 4A pseudogene 6","termid":"PBO:0066495"}


id: PBO:0083020
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Deleted ORF; does not encode a protein; included in the original annotation of Chromosome I but later withdrawn","termid":"PBO:0083020"}


id: PBO:0002023
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RecA family ATPase Dmc1","termid":"PBO:0002023"}


id: GO:0046400
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving keto-3-deoxy-D-manno-octulosonic acid, an acidic sugar present in lipopolysaccharides of the outer membranes of some Gram-negative bacteria.","definition_xrefs":["GOC:ai","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monosaccharide metabolic process","termid":"GO:0005996"},{"relation_name":"is_a","term_name":"carboxylic acid metabolic process","termid":"GO:0019752"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0005975"],"is_obsolete":false,"name":"keto-3-deoxy-D-manno-octulosonic acid metabolic process","synonyms":[{"name":"KDO metabolic process","type":"exact"},{"name":"KDO metabolism","type":"exact"},{"name":"keto-3-deoxy-D-manno-octulosonic acid metabolism","type":"exact"},{"name":"ketodeoxyoctanoate metabolic process","type":"related"}],"termid":"GO:0046400"}


id: CHEBI:171741
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cerulenin","termid":"CHEBI:171741"}


id: MONDO:0032940
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"retinitis pigmentosa","termid":"MONDO:0019200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0004736","MONDO:0005066"],"is_obsolete":false,"name":"retinitis pigmentosa 88","secondary_identifiers":["OMIM:618826","MEDGEN:1720448","DOID:0112145","GARD:16385","UMLS:C5394208"],"synonyms":[{"name":"RETINITIS PIGMENTOSA 88","type":"related"},{"name":"RP88","type":"related"}],"termid":"MONDO:0032940","xrefs":{"Monarch":{"xref_id":"0032940"}}}


id: PBO:0072840
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id: MONDO:0800177
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An injury to the skin and/or its underlying tissues that results from exposure of the affected area to extreme cold.","definition_xrefs":["NCIT:C34627"],"direct_ancestors":[{"relation_name":"is_a","term_name":"injury","termid":"MONDO:0021178"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"frostbite","secondary_identifiers":["icd11.foundation:152692065","SCTID:370977006"],"termid":"MONDO:0800177","xrefs":{"Monarch":{"xref_id":"0800177"}}}


id: PBO:0027107
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_nucleus,_with_protein_mislocalized_to_cytoplasmic_foci","termid":"PBO:0027107"}


id: PBO:0088123
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Vacuolar integral membrane protein required for efflux of amino acids; required for efflux of amino acids during autophagic body breakdown in the vacuole; null mutation causes a gradual loss of viability during starvation","termid":"PBO:0088123"}


id: GO:0044056
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The alteration by a symbiont organism of the functioning of a digestive system process, a physical, chemical, or biochemical process carried out by the host organism to break down ingested nutrients into components that may be easily absorbed and directed into metabolism.","definition_xrefs":["MITRE:tk"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by symbiont of host digestive system process (obsolete GO:0044056)","synonyms":[{"name":"regulation by symbiont of host digestive system process","type":"exact"}],"termid":"GO:0044056"}


id: PBO:0041384
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 5 open reading frame 24","termid":"PBO:0041384"}


id: MONDO:0016585
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete mansonelliasis (obsolete MONDO:0016585)","termid":"MONDO:0016585","xrefs":{"Monarch":{"xref_id":"0016585"}}}


id: PBO:0078982
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ser (anticodon TGA) 2-1","termid":"PBO:0078982"}


id: GO:0017181
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of peptidyl-diphthine, a modified histidine residue.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-diphthine catabolic process (obsolete GO:0017181)","synonyms":[{"name":"peptidyl-diphthine breakdown","type":"exact"},{"name":"peptidyl-diphthine catabolism","type":"exact"},{"name":"peptidyl-diphthine degradation","type":"exact"}],"termid":"GO:0017181"}


id: PBO:0028875
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_poly(A)_RNA_binding","termid":"PBO:0028875"}


id: PBO:0045930
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EF-hand domain family member D1","termid":"PBO:0045930"}


id: FYPO:0005036
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the phosphorylation of one or more specific proteins, or of specific protein sites, does not occur when the cell is subject to nitrogen starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein phosphorylation","termid":"FYPO:0002678"},{"relation_name":"is_a","term_name":"abnormal protein phosphorylation during nitrogen starvation","termid":"FYPO:0005033"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0000002","FYPO:0002274","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abolished protein phosphorylation during nitrogen starvation","synonyms":[{"name":"abolished protein phosphorylation during cellular response to nitrogen starvation","type":"exact"},{"name":"abolished protein phosphorylation during nitrogen deprivation","type":"exact"},{"name":"protein phosphorylation abolished during nitrogen starvation","type":"exact"}],"termid":"FYPO:0005036"}


id: MONDO:0018529
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete qualitative or quantitative defects of Torsin-1A-interacting protein 1 (obsolete MONDO:0018529)","secondary_identifiers":["Orphanet:424925"],"synonyms":[{"name":"qualitative or quantitative defects of Torsin-1A-interacting protein type 1","type":"exact"}],"termid":"MONDO:0018529","xrefs":{"Monarch":{"xref_id":"0018529"}}}


id: GO:1903900
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of viral life cycle.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:18005716"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of viral process","termid":"GO:0050792"},{"relation_name":"regulates","term_name":"viral life cycle","termid":"GO:0019058"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of viral life cycle","synonyms":[{"name":"regulation of lytic viral life cycle","type":"related"},{"name":"regulation of viral assembly, maturation, egress, and release","type":"narrow"},{"name":"regulation of viral infectious cycle","type":"related"},{"name":"regulation of viral replication","type":"related"}],"termid":"GO:1903900"}


id: PBO:0085966
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; overproduction blocks cell cycle arrest in the presence of mating pheromone; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies","termid":"PBO:0085966"}


id: MONDO:0002925
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete extraosseous Ewing's sarcoma (obsolete MONDO:0002925)","termid":"MONDO:0002925","xrefs":{"Monarch":{"xref_id":"0002925"}}}


id: GO:0052629
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1-phosphatidyl-1D-myo-inositol 3,5-bisphosphate + H2O = 1-phosphatidyl-1D-myo-inositol 5-phosphate + phosphate + 2 H+.","definition_xrefs":["RHEA:39019","PMID:19901554"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylinositol-3,5-bisphosphate phosphatase activity","termid":"GO:0106018"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0016788","GO:0016787","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"phosphatidylinositol-3,5-bisphosphate 3-phosphatase activity","secondary_identifiers":["Reactome:R-HSA-6809320","Reactome:R-HSA-6809778","MetaCyc:RXN-10958","Reactome:R-HSA-6809944","Reactome:R-HSA-1676203","Reactome:R-HSA-1676065","Reactome:R-HSA-1676105","EC:3.1.3.95"],"termid":"GO:0052629"}


id: PBO:0066661
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RIPK2 divergent transcript","termid":"PBO:0066661"}


id: PBO:0066536
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RSG2 antisense RNA 1","termid":"PBO:0066536"}


id: PR:Q9P5N3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- alr2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P5N3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alanine racemase 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC359.02","synonyms":[{"name":"Spom972h-alr2","type":"exact"}],"termid":"PR:Q9P5N3"}


id: PR:G2TRM6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- new4 gene.","definition_xrefs":["PRO:DNx","UniProtKB:G2TRM6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein new4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3H5.13","synonyms":[{"name":"Spom972h-new4","type":"exact"}],"termid":"PR:G2TRM6"}


id: PBO:0016930
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ThiJ domain protein (predicted)","termid":"PBO:0016930"}


id: PBO:0091391
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved eukaryotic protein, human HAPSTR1 ortholog, stress response protein","termid":"PBO:0091391"}


id: PBO:0047497
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fem-1 homolog B","termid":"PBO:0047497"}


id: FYPO:0007850
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which microtubules self-assemble into a spindle without the participation of the spindle pole body (SPB) during the second meiotic nuclear division.","definition_xrefs":["PMID:34346498","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal spindle assembly during meiosis II","termid":"FYPO:0004510"},{"relation_name":"is_a","term_name":"meiotic spindle self-assembly","termid":"FYPO:0007848"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000054","FYPO:0000002","FYPO:0000631","FYPO:0001985"],"is_obsolete":false,"name":"spindle self-assembly during meiosis II","synonyms":[{"name":"SPB-independent meiosis II spindle assembly","type":"exact"},{"name":"SPB-independent spindle assembly during meiosis II","type":"exact"},{"name":"acentrosomal meiotic spindle assembly","type":"related"},{"name":"acentrosomal spindle assembly during meiosis II","type":"related"},{"name":"meiosis II spindle self-assembly","type":"exact"},{"name":"meiotic SPB-independent spindle in meiosis II","type":"related"},{"name":"spindle pole body-independent meiosis II spindle assembly","type":"exact"},{"name":"spindle pole body-independent spindle assembly during meiosis II","type":"exact"},{"name":"spindle self-assembly during second meiotic nuclear division","type":"exact"}],"termid":"FYPO:0007850"}


id: PBO:0045704
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dual specificity tyrosine phosphorylation regulated kinase 3","termid":"PBO:0045704"}


id: PBO:0074677
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 61","termid":"PBO:0074677"}


id: GO:0034168
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of toll-like receptor 10 signaling pathway.","definition_xrefs":["PMID:16551253","GOC:add","PMID:17328678"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of immune system process","termid":"GO:0002683"},{"relation_name":"is_a","term_name":"negative regulation of signal transduction","termid":"GO:0009968"},{"relation_name":"is_a","term_name":"regulation of toll-like receptor 10 signaling pathway","termid":"GO:0034167"},{"relation_name":"negatively_regulates","term_name":"toll-like receptor 10 signaling pathway","termid":"GO:0034166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of toll-like receptor 10 signaling pathway","synonyms":[{"name":"negative regulation of TLR10 signaling pathway","type":"exact"},{"name":"negative regulation of toll-like receptor 10 signalling pathway","type":"exact"}],"termid":"GO:0034168"}


id: PBO:0058317
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4690","termid":"PBO:0058317"}


id: MONDO:0002728
data:
  {"annotated_genes":["SJAG_04755","SJAG_04213","SJAG_01111","SJAG_05313"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85556,85555],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012252"},{"annotations":[87691,87692],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013224"}]},"cv_name":"mondo","definition":"An aggressive malignant embryonal neoplasm usually occurring during childhood. It is characterized by the presence of large cells with abundant cytoplasm, large eccentric nucleus, and a prominent nucleolus and it is associated with abnormalities of chromosome 22. It can arise from the central nervous system, kidney, and the soft tissues. The prognosis is poor.","definition_xrefs":["NCIT:C3808"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonal neoplasm","termid":"MONDO:0005564"},{"relation_name":"is_a","term_name":"soft tissue sarcoma","termid":"MONDO:0018078"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01111":null,"SJAG_04213":null,"SJAG_04755":null,"SJAG_05313":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"rhabdoid tumor","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C0206743","GARD:7572","MEDGEN:64646","ICDO:8963/3","ONCOTREE:MRT","DOID:3672","EFO:0005701","MESH:D018335","NANDO:2200057","Orphanet:69077"],"synonyms":[{"name":"malignant rhabdoid tumor","type":"exact"},{"name":"malignant rhabdoid tumour","type":"exact"},{"name":"rhabdoid cancer","type":"related"},{"name":"rhabdoid sarcoma","type":"exact"},{"name":"rhabdoid tumor","type":"exact"}],"termid":"MONDO:0002728","terms_by_termid":{"MONDO:0012252":null,"MONDO:0013224":null},"xrefs":{"Monarch":{"xref_id":"0002728"}}}


id: GO:0004348
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-glucosyl-N-acylsphingosine + H2O = D-glucose + N-acylsphingosine.","definition_xrefs":["EC:3.2.1.45"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycosylceramidase activity","termid":"GO:0017042"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0016798","GO:0003674"],"is_obsolete":false,"name":"glucosylceramidase activity","secondary_identifiers":["RHEA:13269","Reactome:R-HSA-1861789","Reactome:R-HSA-1861788","MetaCyc:GLUCOSYLCERAMIDASE-RXN","Reactome:R-HSA-1605591"],"synonyms":[{"name":"D-glucosyl-N-acylsphingosine glucohydrolase activity","type":"related"},{"name":"GlcCer-beta-glucosidase activity","type":"related"},{"name":"acid beta-glucosidase activity","type":"related"},{"name":"beta-D-glucocerebrosidase activity","type":"related"},{"name":"beta-glucocerebrosidase activity","type":"related"},{"name":"beta-glucosylceramidase activity","type":"related"},{"name":"ceramide glucosidase activity","type":"related"},{"name":"glucocerebrosidase activity","type":"related"},{"name":"glucosphingosine glucosylhydrolase activity","type":"related"},{"name":"glucosylcerebrosidase activity","type":"related"},{"name":"glucosylsphingosine beta-D-glucosidase activity","type":"related"},{"name":"glucosylsphingosine beta-glucosidase activity","type":"related"},{"name":"psychosine hydrolase activity","type":"related"}],"termid":"GO:0004348"}


id: PBO:0061499
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuropilin 1","termid":"PBO:0061499"}


id: MONDO:0957452
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"vascular disorder","termid":"MONDO:0005385"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"segmental arterial mediolysis","secondary_identifiers":["Orphanet:645350","MEDGEN:1387331","icd11.foundation:1160127418","UMLS:C4517096"],"termid":"MONDO:0957452","xrefs":{"Monarch":{"xref_id":"0957452"}}}


id: MONDO:0015034
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Lissencephaly with cerebellar hypoplasia type A (LCHa) is a form of lissencephaly with cerebellar hypoplasia that encompasses classical lissencephaly with thickened cortical gray matter with either no discernible gradient, a gradient with posterior predominance, or a gradient with anterior predominance, and cerebellar vermis hypoplasia.","definition_xrefs":["Orphanet:100011"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lissencephaly with cerebellar hypoplasia","termid":"MONDO:0019450"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"lissencephaly with cerebellar hypoplasia type A","secondary_identifiers":["GARD:19731","MEDGEN:1679234","UMLS:C5191423","icd11.foundation:853428618"],"termid":"MONDO:0015034","xrefs":{"Monarch":{"xref_id":"0015034"}}}


id: GO:1901320
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of heart induction.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"regulation of heart induction","termid":"GO:0090381"},{"relation_name":"negatively_regulates","term_name":"heart induction","termid":"GO:0003129"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of heart induction","synonyms":[{"name":"down regulation of heart induction","type":"exact"},{"name":"down-regulation of heart induction","type":"exact"},{"name":"downregulation of heart induction","type":"exact"},{"name":"inhibition of heart induction","type":"narrow"}],"termid":"GO:1901320"}


id: PBO:0055585
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3021","termid":"PBO:0055585"}


id: PBO:0064135
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyruvate kinase M1/2 pseudogene 2","termid":"PBO:0064135"}


id: PBO:0028179
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_tRNA_splicing","termid":"PBO:0028179"}


id: GO:0044807
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of macrophage migration inhibitory factor due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:rv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine production","termid":"GO:0001816"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"macrophage migration inhibitory factor production","synonyms":[{"name":"MIF production","type":"exact"}],"termid":"GO:0044807"}


id: GO:0000120
data:
  {"annotated_genes":["SJAG_00202","SJAG_02747","SJAG_04083","SJAG_00421","SJAG_00692","SJAG_02813","SJAG_04766","SJAG_05331"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[95937],"is_not":false,"summary":null,"term":"GO:0000120"},{"annotations":[76087,80236,79745],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070860"},{"annotations":[105644,72728,93538,79541],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000500"}]},"cv_name":"cellular_component","definition":"A transcription factor complex that acts at a regulatory region of a gene transcribed by RNA polymerase I.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription regulator complex","termid":"GO:0005667"},{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"},{"relation_name":"part_of","term_name":"nucleolus","termid":"GO:0005730"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00202":null,"SJAG_00421":null,"SJAG_00692":null,"SJAG_02747":null,"SJAG_02813":null,"SJAG_04083":null,"SJAG_04766":null,"SJAG_05331":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005730"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005730","GO:0005634"],"is_obsolete":false,"name":"RNA polymerase I transcription regulator complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"RNA polymerase I transcription factor complex","type":"narrow"}],"termid":"GO:0000120","terms_by_termid":{"GO:0000120":null,"GO:0000500":null,"GO:0070860":null}}


id: PR:O14399
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ned8 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14399"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-like protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC12D12.08c","synonyms":[{"name":"Spom972h-ned8","type":"exact"}],"termid":"PR:O14399"}


id: GO:0052547
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of peptidase activity, the hydrolysis of peptide bonds within proteins.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of proteolysis","termid":"GO:0030162"},{"relation_name":"is_a","term_name":"regulation of hydrolase activity","termid":"GO:0051336"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of peptidase activity","synonyms":[{"name":"peptidase regulator activity","type":"related"}],"termid":"GO:0052547"}


id: PBO:0082568
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Chaperone with a role in facilitating mitochondrial protein import; ascomycete-specific member of the DnaJ-like family, closely related to Ydj1p; predicted to be C-terminally prenylated; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies","termid":"PBO:0082568"}


id: MONDO:0032629
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial complex I deficiency, nuclear type","termid":"MONDO:0100223"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004069"],"is_obsolete":false,"name":"mitochondrial complex 1 deficiency, nuclear type 25","secondary_identifiers":["MEDGEN:1648366","OMIM:618246","GARD:16329","UMLS:C4748806","DOID:0112067"],"synonyms":[{"name":"MC1DN25","type":"related"},{"name":"MITOCHONDRIAL COMPLEX I DEFICIENCY, NUCLEAR TYPE 25","type":"related"}],"termid":"MONDO:0032629","xrefs":{"Monarch":{"xref_id":"0032629"}}}


id: PBO:0053526
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 523","termid":"PBO:0053526"}


id: PBO:0041312
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 2 open reading frame 66","termid":"PBO:0041312"}


id: PATO:0001866
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A spheroid quality inhering in a bearer by virtue of the bearer's exhibiting a polar diameter longer than its equatorial diameter.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Prolate"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spheroid","termid":"PATO:0001865"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prolate","secondary_identifiers":["Image:http\\://upload.wikimedia.org/wikipedia/commons/8/88/ProlateSpheroid.png"],"synonyms":[{"name":"prolate spheroid","type":"related"}],"termid":"PATO:0001866"}


id: PBO:0079831
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uromodulin","termid":"PBO:0079831"}


id: MONDO:0017742
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete disorder of O-xylosylglycan synthesis (obsolete MONDO:0017742)","secondary_identifiers":["Orphanet:309450"],"termid":"MONDO:0017742","xrefs":{"Monarch":{"xref_id":"0017742"}}}


id: MONDO:0006435
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An adenocarcinoma that arises from the submandibular gland. Representative examples include polymorphic low-grade adenocarcinoma and acinic cell carcinoma.","definition_xrefs":["NCIT:C5940"],"direct_ancestors":[{"relation_name":"is_a","term_name":"submandibular gland cancer","termid":"MONDO:0004724"},{"relation_name":"is_a","term_name":"adenocarcinoma","termid":"MONDO:0004970"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"submandibular gland adenocarcinoma","secondary_identifiers":["UMLS:C1336521","MEDGEN:234370","EFO:1000554"],"synonyms":[{"name":"adenocarcinoma of submandibular gland","type":"exact"},{"name":"adenocarcinoma of the submandibular gland","type":"exact"},{"name":"submandibular gland adenocarcinoma","type":"exact"}],"termid":"MONDO:0006435","xrefs":{"Monarch":{"xref_id":"0006435"}}}


id: FYPO:0000430
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which fermentation is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal metabolic process during vegetative growth","termid":"FYPO:0001363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abnormal fermentation","synonyms":[{"name":"abnormal fermentation during mitotic cell cycle","type":"related"},{"name":"abnormal fermentation during vegetative growth","type":"exact"},{"name":"abnormal fermentative metabolism","type":"exact"},{"name":"fermentative metabolism: abnormal","type":"related"}],"termid":"FYPO:0000430"}


id: PBO:0036407
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metaxin 2 Mtx2 (predicted)","termid":"PBO:0036407"}


id: PBO:0003894
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinetochore protein, CENP-K ortholog, Sim4","termid":"PBO:0003894"}


id: MONDO:0004355
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An acute or chronic leukemia that occurs during childhood.","definition_xrefs":["NCIT:C4989"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukemia","termid":"MONDO:0005059"},{"relation_name":"is_a","term_name":"childhood malignant neoplasm","termid":"MONDO:0006517"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005570"],"is_obsolete":false,"name":"childhood leukemia","secondary_identifiers":["NANDO:2100002","UMLS:C1332977","DOID:7757","MEDGEN:234132"],"synonyms":[{"name":"childhood leukaemia (disease)","type":"exact"},{"name":"childhood leukemia","type":"exact"},{"name":"childhood leukemia (disease)","type":"exact"},{"name":"leukaemia","type":"broad"},{"name":"leukaemia (disease) of childhood","type":"exact"},{"name":"leukemia","type":"broad"},{"name":"leukemia (disease) of childhood","type":"exact"},{"name":"paediatric leukaemia (disease)","type":"exact"},{"name":"pediatric leukemia (disease)","type":"exact"}],"termid":"MONDO:0004355","xrefs":{"Monarch":{"xref_id":"0004355"}}}


id: GO:1902764
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of embryonic skeletal joint development.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:16575901","GOC:mr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"regulation of embryonic skeletal joint development","termid":"GO:1902762"},{"relation_name":"positively_regulates","term_name":"embryonic skeletal joint development","termid":"GO:0072498"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of embryonic skeletal joint development","synonyms":[{"name":"activation of embryonic skeletal joint development","type":"narrow"},{"name":"up regulation of embryonic skeletal joint development","type":"exact"},{"name":"up-regulation of embryonic skeletal joint development","type":"exact"},{"name":"upregulation of embryonic skeletal joint development","type":"exact"}],"termid":"GO:1902764"}


id: MONDO:0017423
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete non-syndromic terminal limb defects (obsolete MONDO:0017421)","termid":"MONDO:0017421"}],"gene_count":0,"genotype_count":0,"name":"obsolete split hand or/and split foot malformation (obsolete MONDO:0017423)","secondary_identifiers":["Orphanet:294935"],"termid":"MONDO:0017423","xrefs":{"Monarch":{"xref_id":"0017423"}}}


id: GO:0002445
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An inflammatory response resulting in cell death or dysfunction mediated by activation of the classical complement pathway or induction of effector cell phagocytosis, cytolysis mechanisms via complement or Fc receptors following the binding of antibodies to cell surface antigens on a target cell, or mediated by the direct binding of antibody to cellular receptors.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myeloid leukocyte mediated immunity","termid":"GO:0002444"},{"relation_name":"is_a","term_name":"hypersensitivity","termid":"GO:0002524"},{"relation_name":"is_a","term_name":"immunoglobulin mediated immune response","termid":"GO:0016064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"type II hypersensitivity","secondary_identifiers":["Wikipedia:Type_II_hypersensitivity"],"termid":"GO:0002445"}


id: RO:0002260
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"c has-biological-role r iff c has-role r and r is a biological role (CHEBI:24432)","direct_ancestors":[{"relation_name":"is_a","term_name":"has_role","termid":"RO:0000087"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_biological_role","termid":"RO:0002260"}


id: GO:1901494
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cysteine metabolic process.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of amino acid metabolic process","termid":"GO:0006521"},{"relation_name":"is_a","term_name":"regulation of sulfur amino acid metabolic process","termid":"GO:0031335"},{"relation_name":"regulates","term_name":"cysteine metabolic process","termid":"GO:0006534"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006790"},{"rel_name":"regulates","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0006790","GO:0006520","GO:0008150"],"is_obsolete":false,"name":"regulation of cysteine metabolic process","synonyms":[{"name":"regulation of cysteine metabolism","type":"exact"}],"termid":"GO:1901494"}


id: GO:0003199
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A transition where an endocardial cushion cell loses apical/basolateral polarity, severs intercellular adhesive junctions, degrades basement membrane components and becomes a migratory mesenchymal cell that will contribute to the formation of a cardiac valve.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endocardial cushion to mesenchymal transition","termid":"GO:0090500"},{"relation_name":"part_of","term_name":"heart valve formation","termid":"GO:0003188"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"endocardial cushion to mesenchymal transition involved in heart valve formation","synonyms":[{"name":"endocardial cushion to mesenchymal transition involved in valve formation","type":"exact"}],"termid":"GO:0003199"}


id: PBO:0045854
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 alpha 1 pseudogene 44","termid":"PBO:0045854"}


id: GO:1904508
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein localization to basolateral plasma membrane.","definition_xrefs":["PMID:26115433","GOC:kmv","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein localization to cell periphery","termid":"GO:1904375"},{"relation_name":"is_a","term_name":"regulation of protein localization to membrane","termid":"GO:1905475"},{"relation_name":"regulates","term_name":"protein localization to basolateral plasma membrane","termid":"GO:1903361"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of protein localization to basolateral plasma membrane","synonyms":[{"name":"regulation of protein localisation in basolateral plasma membrane","type":"exact"},{"name":"regulation of protein localisation to basolateral plasma membrane","type":"exact"},{"name":"regulation of protein localization in basolateral plasma membrane","type":"exact"}],"termid":"GO:1904508"}


id: GO:0002676
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of a chronic inflammatory response.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of inflammatory response","termid":"GO:0050727"},{"relation_name":"regulates","term_name":"chronic inflammatory response","termid":"GO:0002544"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of chronic inflammatory response","termid":"GO:0002676"}


id: PBO:0051012
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"insulin like growth factor 2","termid":"PBO:0051012"}


id: FYPO:0005852
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the biotinylation of one or more specific proteins, or of specific protein sites, occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein modification during vegetative growth","termid":"FYPO:0000545"},{"relation_name":"is_a","term_name":"abnormal protein biotinylation during vegetative growth","termid":"FYPO:0005851"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0005447","FYPO:0002274","FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased protein biotinylation during vegetative growth","synonyms":[{"name":"decreased protein biotinylation during mitotic cell cycle","type":"related"},{"name":"reduced protein biotinylation during vegetative growth","type":"exact"}],"termid":"FYPO:0005852"}


id: GO:0090279
data:
  {"annotated_genes":["SJAG_03631","SJAG_04551","SJAG_00296"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91580,113745],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905949"},{"annotations":[102505],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905665"}]},"cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of the directed movement of calcium ions into a cell or organelle.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of calcium ion transport","termid":"GO:0051924"},{"relation_name":"regulates","term_name":"calcium ion import","termid":"GO:0070509"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00296":null,"SJAG_03631":null,"SJAG_04551":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of calcium ion import","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of transmembrane calcium influx","type":"related"}],"termid":"GO:0090279","terms_by_termid":{"GO:1905665":null,"GO:1905949":null}}


id: PBO:0116804
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defensin beta 109D (gene/pseudogene)","termid":"PBO:0116804"}


id: PBO:0045641
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox 5","termid":"PBO:0045641"}


id: PBO:0031173
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mitotic_catastrophe_with_cut,_normal_size_cell","termid":"PBO:0031173"}


id: PBO:0070554
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 20","termid":"PBO:0070554"}


id: PBO:0001362
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA kinase/phosphatase Pnk1","termid":"PBO:0001362"}


id: FYPO:0004114
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce an inviable cell that does not divide, and that has a septum with abnormal size, shape, or structure.","definition_xrefs":["PMID:15116432","PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"abnormal septum morphology during vegetative growth","termid":"FYPO:0002023"},{"relation_name":"is_a","term_name":"inviable after spore germination, without cell division","termid":"FYPO:0001991"},{"relation_name":"is_a","term_name":"abnormal septum morphology during vegetative growth","termid":"FYPO:0002023"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0001320","FYPO:0000032","FYPO:0005447","FYPO:0000002","FYPO:0000004","FYPO:0001985"],"is_obsolete":false,"name":"inviable after spore germination, without cell division, abnormal septum morphology","synonyms":[{"name":"inviable after spore germination, undivided cell, abnormal septum morphology","type":"exact"},{"name":"inviable after spore germination, without cell division, abnormal septum formation","type":"exact"},{"name":"inviable following spore germination, without cell division, abnormal septum morphology","type":"exact"},{"name":"inviable germinated spore, without cell division, abnormal septum morphology","type":"exact"},{"name":"lethal after spore germination, without cell division, abnormal septum morphology","type":"exact"}],"termid":"FYPO:0004114"}


id: GO:0008083
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The function that stimulates a cell to grow or proliferate. Most growth factors have other actions besides the induction of cell growth or proliferation.","definition_xrefs":["ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"receptor ligand activity","termid":"GO:0048018"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0140677","GO:0098772","GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"growth factor activity","termid":"GO:0008083"}


id: PBO:0030424
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-elongated,_constricted_nucleus","termid":"PBO:0030424"}


id: PBO:0081047
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger CCHC-type containing 3","termid":"PBO:0081047"}


id: PBO:0056907
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitoguardin 2","termid":"PBO:0056907"}


id: GO:0016485
data:
  {"annotated_genes":["SJAG_04785","SJAG_01283","SJAG_01838","SJAG_01471","SJAG_03737","SJAG_05351","SJAG_01430","SJAG_02902","SJAG_01004","SJAG_03121","SJAG_03396","SJAG_01750","SJAG_02432","SJAG_02867","SJAG_04398","SJAG_00181","SJAG_02214","SJAG_06636","SJAG_02809","SJAG_01868","SJAG_02980","SJAG_01179","SJAG_02397","SJAG_03261","SJAG_04514","SJAG_00730","SJAG_03910","SJAG_01896","SJAG_04641","SJAG_03524","SJAG_04533","SJAG_04583","SJAG_03648","SJAG_02565","SJAG_02033"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[77334,79649,89499,100602,103652,106129,106507,110421],"is_not":false,"summary":null,"term":"GO:0016485"},{"annotations":[75325,70537],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071586"},{"annotations":[67775],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016539"},{"annotations":[101404,103440,113796,77661,88603,76240,78467],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034982"},{"annotations":[62208,58485,68629],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016540"},{"annotations":[80573,70253,77216,102567,78575,80342],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006627"},{"annotations":[68247,66055,77776,76503,69643,74275,61996,76435,65668],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006465"},{"annotations":[97996,87833,92185],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031638"}]},"cv_name":"biological_process","definition":"Any protein maturation process achieved by the cleavage of a peptide bond or bonds within a protein. Protein maturation is the process leading to the attainment of the full functional capacity of a protein.","definition_xrefs":["GOC:jl","GOC:curators","GOC:jsg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proteolysis","termid":"GO:0006508"},{"relation_name":"is_a","term_name":"protein maturation","termid":"GO:0051604"}],"gene_count":35,"genes_by_uniquename":{"SJAG_00181":null,"SJAG_00730":null,"SJAG_01004":null,"SJAG_01179":null,"SJAG_01283":null,"SJAG_01430":null,"SJAG_01471":null,"SJAG_01750":null,"SJAG_01838":null,"SJAG_01868":null,"SJAG_01896":null,"SJAG_02033":null,"SJAG_02214":null,"SJAG_02397":null,"SJAG_02432":null,"SJAG_02565":null,"SJAG_02809":null,"SJAG_02867":null,"SJAG_02902":null,"SJAG_02980":null,"SJAG_03121":null,"SJAG_03261":null,"SJAG_03396":null,"SJAG_03524":null,"SJAG_03648":null,"SJAG_03737":null,"SJAG_03910":null,"SJAG_04398":null,"SJAG_04514":null,"SJAG_04533":null,"SJAG_04583":null,"SJAG_04641":null,"SJAG_04785":null,"SJAG_05351":null,"SJAG_06636":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051604"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0051604"],"is_obsolete":false,"name":"protein processing","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0051605","Reactome:R-HSA-9033500"],"synonyms":[{"name":"peptidolysis during protein maturation","type":"related"},{"name":"protein maturation by peptide bond cleavage","type":"exact"},{"name":"protein maturation by peptide bond hydrolysis","type":"exact"},{"name":"protein maturation by proteolysis","type":"related"}],"termid":"GO:0016485","terms_by_termid":{"GO:0006465":null,"GO:0006627":null,"GO:0016485":null,"GO:0016539":null,"GO:0016540":null,"GO:0031638":null,"GO:0034982":null,"GO:0071586":null}}


id: SO:0001918
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A cytosine methylated at the 5 carbon.","definition_xrefs":["SO:rtapella"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methylated_cytosine","termid":"SO:0000114"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5_methylcytosine","secondary_identifiers":["http://www.insdc.org/files/feature_table.html#7.4.2","http:http\\://www.pacificbiosciences.com/pdf/WP_Detecting_DNA_Base_Modifications_Using_SMRT_Sequencing.pdf"],"synonyms":[{"name":"5 methylcytosine","type":"exact"},{"name":"5-mC","type":"exact"},{"name":"m-5C","type":"exact"},{"name":"m5c","type":"exact"}],"termid":"SO:0001918"}


id: PBO:0046242
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongin C pseudogene 36","termid":"PBO:0046242"}


id: PBO:0002442
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.3.1.50","termid":"PBO:0002442"}


id: PBO:0085555
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein containing a Kruppel-type zinc-finger domain; similar to Stp1p, Stp2p; predicted transcription factor; relative distribution to the nucleus increases upon DNA replication stress; STP4 has a paralog, STP3, that arose from the whole genome duplication","termid":"PBO:0085555"}


id: PBO:0057494
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 612","termid":"PBO:0057494"}


id: PBO:0012567
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"20S proteasome complex subunit beta 2 (predicted)","termid":"PBO:0012567"}


id: MONDO:0100061
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A peripheral neuropathy that is characterized by variants in PRPS1, which causes decreased or impaired function of the PRPS1 enzyme, and presents as a range of peripheral neuropathies that can include features of Charcot-Marie Tooth syndrome, Arts syndrome, or nonsyndromic hearing loss.","definition_xrefs":["PMID:17701900","PMID:25785835","PMID:27256512","PMID:27886419","PMID:20021999","PMID:25182139","PMID:25491489"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary peripheral neuropathy","termid":"MONDO:0020127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"PRPS1 deficiency disorder","synonyms":[{"name":"PRPS1 deficiency disorder","type":"exact"},{"name":"PRPS1-related CMTX5/Arts syndrome/XLNSHL","type":"exact"}],"termid":"MONDO:0100061","xrefs":{"Monarch":{"xref_id":"0100061"}}}


id: PBO:0039533
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ANKRD34C antisense RNA 1","termid":"PBO:0039533"}


id: GO:0043277
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The recognition and removal of an apoptotic cell by a neighboring cell or by a phagocyte.","definition_xrefs":["PMID:14685684","GOC:rk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phagocytosis","termid":"GO:0006909"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810","GO:0016192"],"is_obsolete":false,"name":"apoptotic cell clearance","synonyms":[{"name":"apoptotic cell removal","type":"exact"},{"name":"efferocytosis","type":"exact"},{"name":"programmed cell clearance","type":"exact"}],"termid":"GO:0043277"}


id: PBO:0088152
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V-ATPase assembly factor; functions with other V-ATPase assembly factors in the ER to efficiently assemble the V-ATPase membrane sector (V0); protein abundance increases in response to DNA replication stress","termid":"PBO:0088152"}


id: MONDO:0000923
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pathologic accumulation of air in the interstitium of the lungs, which is caused by the rupture of alveoli and terminal bronchioles, and is most often seen in premature infants that need mechanical ventilation for respiratory distress syndrome.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pulmonary emphysema","termid":"MONDO:0004849"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interstitial emphysema","secondary_identifiers":["icd11.foundation:2008095771","DOID:10030","NCIT:C34571","SCTID:77690003","MEDGEN:234586","ICD10CM:J98.2","ICD9:518.1","UMLS:C1370824"],"synonyms":[{"name":"PIE","type":"exact"},{"name":"interstitial emphysema of lung","type":"exact"},{"name":"pie","type":"exact"},{"name":"pulmonary interstitial emphysema","type":"exact"}],"termid":"MONDO:0000923","xrefs":{"Monarch":{"xref_id":"0000923"}}}


id: FYECO:0000365
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Cells were blocked using carbendazim (MBC) and subsequently released from the block.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping condition combinations","termid":"FYECO:0000238"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MBC block and release","termid":"FYECO:0000365"}


id: GO:0062195
data:
  {"annotated_genes":["SJAG_04841"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97638],"is_not":false,"summary":null,"term":"GO:0062195"}]},"cv_name":"biological_process","definition":"The organization process that preserves a microtubule bundle in a stable functional or structural state.","definition_xrefs":["PMID:18061564"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component maintenance","termid":"GO:0043954"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04841":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"microtubule bundle maintenance","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0062195","terms_by_termid":{"GO:0062195":null}}


id: PBO:0017084
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces pombe specific protein Mug150","termid":"PBO:0017084"}


id: PBO:0042835
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CFAP20DC antisense RNA 1","termid":"PBO:0042835"}


id: PBO:0046493
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ergosterol biosynthesis 28 homolog","termid":"PBO:0046493"}


id: PBO:0040755
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BDNF antisense RNA","termid":"PBO:0040755"}


id: PBO:0068745
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U5D small nuclear 2, pseudogene","termid":"PBO:0068745"}


id: MONDO:0011130
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sebaceous gland hyperplasia, familial presenile","secondary_identifiers":["MESH:C537530","OMIM:601700","UMLS:C1866428","MEDGEN:356529"],"synonyms":[{"name":"sebaceous gland hyperplasia, familial presenile","type":"exact"}],"termid":"MONDO:0011130","xrefs":{"Monarch":{"xref_id":"0011130"}}}


id: RO:0002525
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"inverse of has subsequence","direct_ancestors":[{"relation_name":"is_a","term_name":"part_of","termid":"BFO:0000050"},{"relation_name":"is_a","term_name":"is_bound_by_sequence_of","termid":"RO:0002523"},{"relation_name":"is_a","term_name":"overlaps_sequence_of","termid":"RO:0002526"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"is_subsequence_of","termid":"RO:0002525"}


id: PATO:0001326
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001326 left-right symmetry (obsolete PATO:0001326)","termid":"PATO:0001326"}


id: PBO:0038541
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"abhydrolase domain containing 14B","termid":"PBO:0038541"}


id: MONDO:0013631
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"lung cancer","termid":"MONDO:0008903"},{"relation_name":"is_a","term_name":"hereditary neoplastic syndrome","termid":"MONDO:0015356"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lung cancer susceptibility 5","secondary_identifiers":["MEDGEN:481786","OMIM:614210","UMLS:C3280156"],"synonyms":[{"name":"LNCR5","type":"exact"},{"name":"lung cancer susceptibility 5","type":"exact"}],"termid":"MONDO:0013631","xrefs":{"Monarch":{"xref_id":"0013631"}}}


id: GO:0016899
data:
  {"annotated_genes":["SJAG_00265"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[76753],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003885"}]},"cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which a CH-OH group acts as a hydrogen or electron donor and reduces an oxygen molecule.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH-OH group of donors","termid":"GO:0016614"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00265":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["EC:1.1.3.-"],"termid":"GO:0016899","terms_by_termid":{"GO:0003885":null}}


id: GO:0031650
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate or extent of heat generation.","definition_xrefs":["GOC:dph","GOC:tb","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of multicellular organismal process","termid":"GO:0051239"},{"relation_name":"regulates","term_name":"heat generation","termid":"GO:0031649"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of heat generation","termid":"GO:0031650"}


id: PBO:0070498
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L5 pseudogene 33","termid":"PBO:0070498"}


id: MOD:01790
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an an N-terminal L-tyrosine residue to tyrosine immonium ion.","definition_xrefs":["PubMed:18688235","PubMed:17074506"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-tyrosine residue","termid":"MOD:00919"},{"relation_name":"is_a","term_name":"residue reporter fragment","termid":"MOD:01527"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tyrosine immonium ion","synonyms":[{"name":"2-(4-hydroxyphenyl)ethaniminium","type":"exact"}],"termid":"MOD:01790"}


id: PBO:0087420
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit (90 kDa) of TFIID and SAGA complexes; involved in RNA polymerase II transcription initiation and in chromatin modification","termid":"PBO:0087420"}


id: GO:0075272
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of zygosporangium development, a process in which a fruiting body called zygosporangium is formed.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of spore-bearing organ development","termid":"GO:0075260"},{"relation_name":"regulates","term_name":"zygosporangium development","termid":"GO:0075271"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of zygosporangium development","termid":"GO:0075272"}


id: PBO:0113012
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Atypical protein kinase; along with paralog, ALK2, required for proper spindle positioning and nuclear segregation following mitotic arrest, proper organization of formins and polarisome components in mitosis, and survival after spindle assembly checkpoint delay; regulates the morphogenesis checkpoint in response to polarity insults through inactivation of Mih1p; phosphorylated in response to DNA damage; similar to mammalian haspins","termid":"PBO:0113012"}


id: GO:0008470
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-methylbutanoyl-CoA + H+ + oxidized [electron-transfer flavoprotein] = 3-methyl-(2E)-butenoyl-CoA + reduced [electron-transfer flavoprotein].","definition_xrefs":["PMID:7640268","PMID:25450250","RHEA:12276"],"direct_ancestors":[{"relation_name":"is_a","term_name":"short-chain fatty acyl-CoA dehydrogenase activity","termid":"GO:0016937"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"3-methylbutanoyl-CoA dehydrogenase activity","secondary_identifiers":["MetaCyc:RXN0-2301","Reactome:R-HSA-9914837","Reactome:R-HSA-70745","EC:1.3.8.4"],"synonyms":[{"name":"3-methylbutanoyl-CoA:(acceptor) oxidoreductase activity","type":"related"},{"name":"3-methylbutanoyl-CoA:acceptor oxidoreductase activity","type":"related"},{"name":"isovaleroyl-coenzyme A dehydrogenase activity","type":"related"},{"name":"isovaleryl-CoA dehydrogenase activity","type":"exact"},{"name":"isovaleryl-coenzyme A dehydrogenase activity","type":"related"}],"termid":"GO:0008470"}


id: PBO:0074129
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 31 member 1 pseudogene 1","termid":"PBO:0074129"}


id: GO:0003747
data:
  {"annotated_genes":["SJAG_00308","SJAG_05221","SJAG_00338","SJAG_01518","SJAG_02601","SJAG_04283","SJAG_01696"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[66541,69273,72853,107548,116417],"is_not":false,"summary":null,"term":"GO:0003747"},{"annotations":[99011],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016150"},{"annotations":[74192],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016149"}]},"cv_name":"molecular_function","definition":"Involved in catalyzing the release of a nascent polypeptide chain from a ribosome.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"translation termination factor activity","termid":"GO:0008079"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00308":null,"SJAG_00338":null,"SJAG_01518":null,"SJAG_01696":null,"SJAG_02601":null,"SJAG_04283":null,"SJAG_05221":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674"],"is_obsolete":false,"name":"translation release factor activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0003749","GO:0003748"],"termid":"GO:0003747","terms_by_termid":{"GO:0003747":null,"GO:0016149":null,"GO:0016150":null}}


id: FYPO:0005085
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin at small nuclear RNA (snRNA) genes is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PMID:21151114","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to chromatin at ncRNA gene","termid":"FYPO:0005083"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000257","FYPO:0000002","FYPO:0001312","FYPO:0000138"],"is_obsolete":false,"name":"normal protein localization to chromatin at snRNA gene","synonyms":[{"name":"normal protein localisation to chromatin at snRNA gene","type":"exact"},{"name":"normal protein localization to chromatin at snRNA gene during mitotic cell cycle","type":"related"},{"name":"normal protein localization to chromatin at snRNA gene during vegetative growth","type":"exact"}],"termid":"FYPO:0005085"}


id: GO:0005432
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: Ca2+(in) + Na+(out) = Ca2+(out) + Na+(in).","definition_xrefs":["PMID:16371597","GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sodium ion transmembrane transporter activity","termid":"GO:0015081"},{"relation_name":"is_a","term_name":"calcium:monoatomic cation antiporter activity","termid":"GO:0015368"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"calcium:sodium antiporter activity","secondary_identifiers":["Reactome:R-HSA-425661","Reactome:R-HSA-8949688","Reactome:R-HSA-8949703","RHEA:29255"],"synonyms":[{"name":"mitochondrial sodium/calcium ion exchange","type":"related"},{"name":"sodium/calcium exchanger","type":"exact"},{"name":"sodium:calcium exchange","type":"related"}],"termid":"GO:0005432"}


id: MONDO:0001937
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete LEOPARD syndrome (obsolete MONDO:0001937)","termid":"MONDO:0001937","xrefs":{"Monarch":{"xref_id":"0001937"}}}


id: PBO:0061929
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 1 subfamily J member 4","termid":"PBO:0061929"}


id: PBO:0028874
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_poly(A)_RNA_binding","termid":"PBO:0028874"}


id: PBO:0041575
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 21 open reading frame 62","termid":"PBO:0041575"}


id: PBO:0058062
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4282","termid":"PBO:0058062"}


id: GO:0009946
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The establishment, maintenance and elaboration of the proximal/distal axis. The proximal/distal axis is defined by a line that runs from main body (proximal end) of an organism outward (distal end).","definition_xrefs":["GOC:dph","GOC:go_curators","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axis specification","termid":"GO:0009798"},{"relation_name":"part_of","term_name":"proximal/distal pattern formation","termid":"GO:0009954"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"proximal/distal axis specification","synonyms":[{"name":"proximal/distal axis determination","type":"related"},{"name":"proximodistal axis specification","type":"exact"}],"termid":"GO:0009946"}


id: MONDO:0015002
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any early infantile epileptic encephalopathy in which the cause of the disease is a mutation in the DENND5A gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental and epileptic encephalopathy","termid":"MONDO:0100062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"},{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027","MONDO:0700092"],"is_obsolete":false,"name":"developmental and epileptic encephalopathy, 49","secondary_identifiers":["OMIM:617281","DOID:0080441","UMLS:C4310635","MEDGEN:934602"],"synonyms":[{"name":"DEE49","type":"exact"},{"name":"DENND5A early infantile epileptic encephalopathy","type":"exact"},{"name":"EIEE49","type":"exact"},{"name":"developmental and epileptic encephalopathy 49","type":"exact"},{"name":"early infantile epileptic encephalopathy caused by mutation in DENND5A","type":"exact"},{"name":"epileptic encephalopathy, early infantile, 49","type":"exact"},{"name":"epileptic encephalopathy, early infantile, 49; EIEE49","type":"exact"},{"name":"epileptic encephalopathy, early infantile, type 49","type":"exact"}],"termid":"MONDO:0015002","xrefs":{"Monarch":{"xref_id":"0015002"}}}


id: MONDO:0800105
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A psychiatric disorder featuring stupor, posturing, and echophenomena.","definition_xrefs":["PMID:31196793"],"direct_ancestors":[{"relation_name":"is_a","term_name":"psychiatric disorder","termid":"MONDO:0002025"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"catatonia","secondary_identifiers":["MESH:D002389","UMLS:C0007398","MEDGEN:2904","icd11.foundation:486722075"],"termid":"MONDO:0800105","xrefs":{"Monarch":{"xref_id":"0800105"}}}


id: MONDO:0044326
data:
  {"annotated_genes":["SJAG_02163"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85461],"is_not":false,"summary":null,"term":"MONDO:0044326"}]},"cv_name":"mondo","definition":"DEDSM is a neurodevelopmental disorder characterized by global developmental delay, variable intellectual disability, and early-onset seizures with a myoclonic component. Most patients have delayed motor development and show abnormal movements, including ataxia, dystonia, and tremor (summary by {1:Hamdan et al., 2017}).","definition_xrefs":["OMIM:617836"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"},{"relation_name":"is_a","term_name":"DHDDS-related syndrome","termid":"MONDO:1010097"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02163":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"developmental delay and seizures with or without movement abnormalities","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1641343","DOID:0080473","UMLS:C4693376","GARD:16261"],"synonyms":[{"name":"DEDSM","type":"related"},{"name":"developmental delay and seizures with or without movement abnormalities","type":"exact"}],"termid":"MONDO:0044326","terms_by_termid":{"MONDO:0044326":null},"xrefs":{"Monarch":{"xref_id":"0044326"}}}


id: PBO:0088848
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar transporter chaperone (VTC) complex subunit","termid":"PBO:0088848"}


id: GO:0090171
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the structures of a chondrocyte are generated and organized. This process occurs while the initially relatively unspecialized cell is acquiring the specialized features of a chondrocyte.","definition_xrefs":["GOC:ascb_2009","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell morphogenesis","termid":"GO:0000902"},{"relation_name":"part_of","term_name":"chondrocyte development","termid":"GO:0002063"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chondrocyte morphogenesis","termid":"GO:0090171"}


id: GO:0046461
data:
  {"annotated_genes":["SJAG_02100","SJAG_01036","SJAG_02543","SJAG_03604","SJAG_02089"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[74789],"is_not":false,"summary":null,"term":"GO:0046461"},{"annotations":[71918,92257,98825,117966],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019433"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of neutral lipids, lipids only soluble in solvents of very low polarity.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neutral lipid metabolic process","termid":"GO:0006638"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01036":null,"SJAG_02089":null,"SJAG_02100":null,"SJAG_02543":null,"SJAG_03604":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"neutral lipid catabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"neutral lipid breakdown","type":"exact"},{"name":"neutral lipid catabolism","type":"exact"},{"name":"neutral lipid degradation","type":"exact"}],"termid":"GO:0046461","terms_by_termid":{"GO:0019433":null,"GO:0046461":null}}


id: GO:0006889
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the concentration of calcium in the endoplasmic reticulum.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of calcium in ER (obsolete GO:0006889)","synonyms":[{"name":"regulation of calcium in ER","type":"exact"}],"termid":"GO:0006889"}


id: MONDO:0007143
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Aortic arch anomaly-peculiar facies-intellectual disability syndrome is a developmental anomaly characterized at birth by the presence of right-sided aortic arch, craniofacial dysmorphism (microcephaly, asymmetric, facial bones, broad forehead, borderline hypertelorism, nasal septum deviation, large nasal cavity, large, posteriorly rotated ears, and microstomia with downturned corners), and intellectual disability. These features were observed in 4 members of one family, involving 2 successive generations, suggesting an autosomal dominant mode of transmission. There have been no further descriptions in the literature since 1968.","definition_xrefs":["Orphanet:1110"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aortic arch anomaly-facial dysmorphism-intellectual disability syndrome","secondary_identifiers":["UMLS:C1862682","GARD:739","OMIM:107500","MESH:C537785","MEDGEN:350734"],"synonyms":[{"name":"aortic arch anomaly - peculiar facies - intellectual disability","type":"related"},{"name":"aortic arch anomaly with peculiar facies and intellectual disability","type":"related"},{"name":"aortic arch anomaly with peculiar facies and mental retardation","type":"related"},{"name":"aortic arch anomaly-peculiar facies-intellectual disability syndrome","type":"related"},{"name":"familial syndrome of right-sided aortic arch, mental deficiency, and facial dysmorphism","type":"related"}],"termid":"MONDO:0007143","xrefs":{"Monarch":{"xref_id":"0007143"}}}


id: FYPO:0001131
data:
  {"alleles_by_uniquename":{"SJAG_01050:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01050","name":"nur1delta","uniquename":"SJAG_01050:allele-1"},"SJAG_03892:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03892","name":"vps4delta","uniquename":"SJAG_03892:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[120012],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001132"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to heterochromatin is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to chromatin during vegetative growth","termid":"FYPO:0000452"},{"relation_name":"is_a","term_name":"abnormal protein localization to heterochromatin","termid":"FYPO:0004718"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01050":null,"SJAG_01745":null,"SJAG_03892":null},"genotype_count":1,"genotypes_by_uniquename":{"nur1delta__vps4delta":{"display_name":"nur1delta vps4delta","display_uniquename":"nur1delta__vps4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01050:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03892:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0000138","FYPO:0001320"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_03892","SJAG_01050"],"name":"abnormal protein localization to heterochromatin during vegetative growth","references_by_uniquename":{"PMID:32109380":null},"synonyms":[{"name":"abnormal protein localisation to heterochromatin during vegetative growth","type":"exact"},{"name":"abnormal protein localization to heterochromatin during mitotic cell cycle","type":"related"}],"termid":"FYPO:0001131","terms_by_termid":{"FYPO:0001132":null,"FYPO_EXT:0000001":null}}


id: GO:1901905
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a tamsulosin stimulus.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to amine","termid":"GO:0014075"},{"relation_name":"is_a","term_name":"response to ether","termid":"GO:0045472"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to tamsulosin","termid":"GO:1901905"}


id: PBO:0075056
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 116-19","termid":"PBO:0075056"}


id: PBO:0031819
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_apoptosis","termid":"PBO:0031819"}


id: PBO:0005388
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"copper binding protein of the mitchondrial inner membrane Cmc2 (predicted)","termid":"PBO:0005388"}


id: FYPO:0008380
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the extent of histone H2A phosphorylation during a cellular response to camptothecin is normal (i.e. indistinguishable from wild-type).","definition_xrefs":["PomBase:pc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal histone H2A phosphorylation during vegetative growth","termid":"FYPO:0002601"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001312","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal histone H2A phosphorylation during cellular response to camptothecin","termid":"FYPO:0008380"}


id: MONDO:0007001
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Abnormal protrusion of one or more of the leaflets of tricuspid valve into the right atrium during systole. This allows the backflow of blood into right atrium leading to tricuspid valve insufficiency; systolic murmurs. Its most common cause is not primary valve abnormality but rather the dilation of the right ventricle and the tricuspid annulus.","definition_xrefs":["MESH:D014263"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aortic disorder","termid":"MONDO:0005561"},{"relation_name":"is_a","term_name":"congenital tricuspid malformation","termid":"MONDO:0020289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"tricuspid valve prolapse","secondary_identifiers":["UMLS:C0040962","DOID:5644","icd11.foundation:973833808","MedDRA:10066862","EFO:1001218","Orphanet:95458","SCTID:253383003","HP:0001704","MEDGEN:11912"],"synonyms":[{"name":"tricuspid valve prolapse","type":"exact"},{"name":"tricuspid valve prolapse (disease)","type":"exact"}],"termid":"MONDO:0007001","xrefs":{"Monarch":{"xref_id":"0007001"}}}


id: MONDO:0002661
data:
  {"annotated_genes":["SJAG_01756","SJAG_02063","SJAG_03677","SJAG_00495","SJAG_00856"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87535],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014937"},{"annotations":[87291],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010557"},{"annotations":[87621],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009624"},{"annotations":[85622],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014592"},{"annotations":[87427],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009796"}]},"cv_name":"mondo","definition":"A non-neoplastic or neoplastic disorder that affects the uvea. Representative examples include uveitis, chorioretinitis, and uveal melanoma.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eye disorder","termid":"MONDO:0005328"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00495":null,"SJAG_00856":null,"SJAG_01756":null,"SJAG_02063":null,"SJAG_03677":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"uveal disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:3480","MEDGEN:21804","SCTID:95678007","NCIT:C26908","MESH:D014603","UMLS:C0042161"],"synonyms":[{"name":"disease of uvea","type":"exact"},{"name":"disease or disorder of uvea","type":"exact"},{"name":"disorder of uvea","type":"exact"},{"name":"disorder of uveal tract","type":"related"},{"name":"uvea disease","type":"exact"},{"name":"uvea disease or disorder","type":"exact"},{"name":"uveal disease","type":"exact"},{"name":"uveal diseases","type":"related"},{"name":"uveal disorder","type":"exact"},{"name":"uveal tract disease","type":"exact"}],"termid":"MONDO:0002661","terms_by_termid":{"MONDO:0009624":null,"MONDO:0009796":null,"MONDO:0010557":null,"MONDO:0014592":null,"MONDO:0014937":null},"xrefs":{"Monarch":{"xref_id":"0002661"}}}


id: GO:0022026
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals generated as a consequence of a epidermal growth factor receptor binding to one of its physiological ligands that contributes to the commitment of a neuroblast to a neuronal fate. The neuron will reside in the forebrain.","definition_xrefs":["GOC:dgh","GOC:cls","GOC:dph","GOC:jid","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epidermal growth factor receptor signaling pathway","termid":"GO:0007173"},{"relation_name":"part_of","term_name":"commitment of multipotent stem cells to neuronal lineage in forebrain","termid":"GO:0021898"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"epidermal growth factor signaling pathway involved in forebrain neuron fate commitment","synonyms":[{"name":"epidermal growth factor signalling pathway involved in forebrain neuron fate commitment","type":"exact"}],"termid":"GO:0022026"}


id: PBO:0041005
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BLOC-1 related complex subunit 7","termid":"PBO:0041005"}


id: PR:P40380
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rum1 gene.","definition_xrefs":["UniProtKB:P40380","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin-dependent kinase inhibitor rum1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC32F12.09","synonyms":[{"name":"Spom972h-rum1","type":"exact"},{"name":"p25-rum1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P40380"}


id: MONDO:0002632
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A bone osteosarcoma that has metastasized to skeletal or extraskeletal sites.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bone osteosarcoma","termid":"MONDO:0002629"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"metachronous osteosarcoma of the bone","secondary_identifiers":["MEDGEN:233695","NCIT:C38157","DOID:3379","UMLS:C1334704"],"synonyms":[{"name":"metachronous osteosarcoma","type":"exact"},{"name":"metachronous osteosarcoma of the bone","type":"exact"}],"termid":"MONDO:0002632","xrefs":{"Monarch":{"xref_id":"0002632"}}}


id: MONDO:0012657
data:
  {"annotated_genes":["SJAG_01067"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85859],"is_not":false,"summary":null,"term":"MONDO:0012657"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01067":null},"genotype_count":0,"is_obsolete":false,"name":"Mungan syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:369554","UMLS:C1969653","MESH:C548078","OMIM:611376"],"synonyms":[{"name":"MGS","type":"exact"},{"name":"MUNGAN syndrome","type":"exact"},{"name":"pseudoobstruction chronic idiopathic intestinal with Barrett esophagus and cardiac abnormalities","type":"related"},{"name":"pseudoobstruction chronic idiopathic intestinal with Barrett oesophagus and cardiac abnormalities","type":"related"},{"name":"pseudoobstruction, chronic idiopathic intestinal, with Barrett esophagus and Cardiac abnormalities","type":"related"},{"name":"pseudoobstruction, chronic idiopathic intestinal, with Barrett oesophagus and Cardiac abnormalities","type":"related"},{"name":"visceral Neuromyopathy, familial, with pseudoobstruction, Megaduodenum, Barrett esophagus, and Cardiac abnormalities","type":"related"},{"name":"visceral neuromyopathy familial with pseudoobstruction megaduodenum Barrett esophagus and cardiac abnormalities","type":"related"},{"name":"visceral neuromyopathy familial with pseudoobstruction megaduodenum Barrett oesophagus and cardiac abnormalities","type":"related"}],"termid":"MONDO:0012657","terms_by_termid":{"MONDO:0012657":null},"xrefs":{"Monarch":{"xref_id":"0012657"}}}


id: GO:0072464
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that occurs in response to signals generated as a result of meiotic spindle assembly checkpoint signaling.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to meiotic cell cycle checkpoint signaling","termid":"GO:0072410"},{"relation_name":"is_a","term_name":"response to spindle assembly checkpoint signaling","termid":"GO:0072485"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to meiotic spindle assembly checkpoint signaling","synonyms":[{"name":"meiotic spindle assembly checkpoint effector process","type":"exact"},{"name":"response to signal involved in meiotic spindle assembly checkpoint","type":"exact"}],"termid":"GO:0072464"}


id: FYECO:0000115
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which guanosine triphosphate was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ GTP","synonyms":[{"name":"+ guanosine triphosphate","type":"exact"}],"termid":"FYECO:0000115"}


id: MONDO:0002188
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign neoplasm that arises from sweat glands in the vulva and is characterized by the presence of lobules composed of epithelial cells with clear cytoplasm.","definition_xrefs":["NCIT:C40312"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vulvar benign neoplasm","termid":"MONDO:0000643"},{"relation_name":"is_a","term_name":"nodular hidradenoma","termid":"MONDO:0002189"},{"relation_name":"is_a","term_name":"benign neoplasm of sweat gland","termid":"MONDO:0021489"},{"relation_name":"is_a","term_name":"benign epithelial skin neoplasm","termid":"MONDO:0024666"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"vulvar nodular hidradenoma","secondary_identifiers":["UMLS:C1520091","DOID:2060","MEDGEN:276994"],"synonyms":[{"name":"mammalian vulva nodular hidradenoma","type":"exact"},{"name":"nodular hidradenoma of mammalian vulva","type":"exact"},{"name":"vulvar nodular hidradenoma","type":"exact"}],"termid":"MONDO:0002188","xrefs":{"Monarch":{"xref_id":"0002188"}}}


id: PBO:0077012
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THBS1 intronic transcript 1","termid":"PBO:0077012"}


id: GO:0033741
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: AMP + glutathione disulfide + H+ + sulfite = 5'-adenylyl sulfate + 2 glutathione.","definition_xrefs":["RHEA:14141","EC:1.8.4.9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor","termid":"GO:0016671"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"adenylyl-sulfate reductase (glutathione) activity","secondary_identifiers":["KEGG_REACTION:R05717","MetaCyc:1.8.4.9-RXN"],"synonyms":[{"name":"5'-adenylylsulfate reductase activity","type":"related"},{"name":"AMP,sulfite:glutathione-disulfide oxidoreductase (adenosine-5'-phosphosulfate-forming) activity","type":"related"},{"name":"AMP,sulfite:oxidized-glutathione oxidoreductase (adenosine-5'-phosphosulfate-forming) activity","type":"related"},{"name":"plant-type 5'-adenylylsulfate reductase activity","type":"narrow"}],"termid":"GO:0033741"}


id: PBO:0113523
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Vacuolar alpha mannosidase; involved in free oligosaccharide (fOS) degradation; upregulated under glucose starvation; targeted to vacuole via CVT pathway and AP-3 pathway","termid":"PBO:0113523"}


id: PBO:0044806
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defensin beta 105A","termid":"PBO:0044806"}


id: GO:0009543
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The cavity enclosed within the chloroplast thylakoid membrane. An example of this component is found in Arabidopsis thaliana.","definition_xrefs":["GOC:mtg_sensu","ISBN:0943088399"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid thylakoid lumen","termid":"GO:0031978"},{"relation_name":"part_of","term_name":"chloroplast thylakoid","termid":"GO:0009534"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"chloroplast thylakoid lumen","termid":"GO:0009543"}


id: GO:0019736
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The incorporation of sarcosine (N-methylglycine) into non-coded peptides.","definition_xrefs":["RESID:AA0063"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-sarcosine incorporation (obsolete GO:0019736)","termid":"GO:0019736"}


id: MONDO:0016373
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A condition that consists of spontaneous, gentle, constant, rippling contractions that spread through the affected striated muscle.","definition_xrefs":["PMID:32809430"],"direct_ancestors":[{"relation_name":"is_a","term_name":"facial nerve disorder","termid":"MONDO:0002098"},{"relation_name":"is_a","term_name":"movement disorder","termid":"MONDO:0005395"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isolated facial myokymia","secondary_identifiers":["UMLS:C0270871","ICD10CM:G51.4","Orphanet:221106","MEDGEN:78741"],"termid":"MONDO:0016373","xrefs":{"Monarch":{"xref_id":"0016373"}}}


id: PBO:0077497
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 216","termid":"PBO:0077497"}


id: PBO:0002989
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cationic amino acid transporter Cat1","termid":"PBO:0002989"}


id: PBO:0042676
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CEA cell adhesion molecule pseudogene 10","termid":"PBO:0042676"}


id: GO:1990725
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a cord factor, an M. tuberculosis cell wall glycolipid, and transmitting a signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:hjd","PMID:23602766"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor activity","termid":"GO:0038023"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"cord factor receptor activity","secondary_identifiers":["Wikipedia:Cord_factor"],"synonyms":[{"name":"TMD receptor activity","type":"exact"},{"name":"trehalose 6,6'-dimycolate receptor activity","type":"exact"}],"termid":"GO:1990725"}


id: MONDO:1012275
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"bird disease","termid":"MONDO:0024905"},{"relation_name":"is_a","term_name":"tibial dyschondroplasia, non-human animal","termid":"MONDO:1011954"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tibial dyschondroplasia, chicken","secondary_identifiers":["OMIA:001007-9031"],"termid":"MONDO:1012275","xrefs":{"Monarch":{"xref_id":"1012275"}}}


id: PBO:0079725
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"upstream binding transcription factor like 1","termid":"PBO:0079725"}


id: PBO:0091236
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Con-6 family conserved fungal protein","termid":"PBO:0091236"}


id: GO:0009653
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id: GO:0009245
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id: PR:O13920
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id: PBO:0085882
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id: GO:0090593
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id: PBO:0039176
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id: PBO:0002566
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id: PBO:0080625
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id: PBO:0081175
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id: PR:O42967
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id: GO:0090025
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id: MONDO:0000226
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id: GO:0005041
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id: PBO:0057443
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id: GO:1900923
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id: PBO:0076335
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id: PR:Q9UUF1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A deoxyribonuclease TATDN1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02854"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deoxyribonuclease Tat-D (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC17A3.08","secondary_identifiers":["UniProtKB:Q9UUF1"],"synonyms":[{"name":"Spom972h-TATDN1","type":"exact"}],"termid":"PR:Q9UUF1"}


id: MONDO:1010741
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autoimmune lymphoproliferative syndrome that occurs in domestic cat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autoimmune lymphoproliferative syndrome, non-human animal","termid":"MONDO:1010124"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autoimmune lymphoproliferative syndrome, domestic cat","secondary_identifiers":["OMIA:002064-9685"],"termid":"MONDO:1010741","xrefs":{"Monarch":{"xref_id":"1010741"}}}


id: GO:0042420
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of dopamine, a catecholamine neurotransmitter and a metabolic precursor of noradrenaline and adrenaline.","definition_xrefs":["GOC:jl","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dopamine metabolic process","termid":"GO:0042417"},{"relation_name":"is_a","term_name":"catecholamine catabolic process","termid":"GO:0042424"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dopamine catabolic process","secondary_identifiers":["Reactome:R-HSA-379397","Reactome:R-HSA-379398"],"synonyms":[{"name":"dopamine breakdown","type":"exact"},{"name":"dopamine catabolism","type":"exact"},{"name":"dopamine degradation","type":"exact"}],"termid":"GO:0042420"}


id: MONDO:0020771
data:
  {"annotated_genes":["SJAG_03923","SJAG_02242","SJAG_04418"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85971],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011801"},{"annotations":[86982,86981],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0018996"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive cerebellar ataxia","termid":"MONDO:0015244"},{"relation_name":"is_a","term_name":"DNA repair disease","termid":"MONDO:0021190"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02242":null,"SJAG_03923":null,"SJAG_04418":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0021190"},{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0021190","MONDO:0005066","MONDO:0005559","MONDO:0006025"],"is_obsolete":false,"name":"spinocerebellar ataxia, autosomal recessive, with axonal neuropathy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:337609","UMLS:C1846574","OMIMPS:607250"],"synonyms":[{"name":"SCAN","type":"exact"}],"termid":"MONDO:0020771","terms_by_termid":{"MONDO:0011801":null,"MONDO:0018996":null},"xrefs":{"Monarch":{"xref_id":"0020771"}}}


id: PBO:0000543
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent DNA helicase Rdh54","termid":"PBO:0000543"}


id: PBO:0053627
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 671","termid":"PBO:0053627"}


id: GO:0090598
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The processes by which anatomical structures that are only present in the male organism are generated and organized.","definition_xrefs":["GOC:tb","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"},{"relation_name":"part_of","term_name":"male sex differentiation","termid":"GO:0046661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"male anatomical structure morphogenesis","termid":"GO:0090598"}


id: PBO:0074405
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMIM10L2B antisense RNA 1","termid":"PBO:0074405"}


id: PBO:0068446
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 20, pseudogene","termid":"PBO:0068446"}


id: PBO:0091101
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CENP-W ortholog","termid":"PBO:0091101"}


id: GO:0008156
data:
  {"annotated_genes":["SJAG_01210","SJAG_03997","SJAG_04855","SJAG_00247","SJAG_02162","SJAG_03048","SJAG_04671","SJAG_03097","SJAG_01068","SJAG_02724"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[117232],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903464"},{"annotations":[98132,102729,109272],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903467"},{"annotations":[103592],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1902681"},{"annotations":[108894,99721,103593,107007],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0011000"},{"annotations":[115407,99722,102637],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031582"},{"annotations":[99723],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090001"},{"annotations":[102638],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071807"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of DNA replication.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of DNA replication","termid":"GO:0006275"},{"relation_name":"is_a","term_name":"negative regulation of DNA metabolic process","termid":"GO:0051053"},{"relation_name":"negatively_regulates","term_name":"DNA replication","termid":"GO:0006260"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00247":null,"SJAG_01068":null,"SJAG_01210":null,"SJAG_02162":null,"SJAG_02724":null,"SJAG_03048":null,"SJAG_03097":null,"SJAG_03997":null,"SJAG_04671":null,"SJAG_04855":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006260"},{"rel_name":"negatively_regulates","termid":"GO:0006259"},{"rel_name":"negatively_regulates","termid":"GO:0006260"}],"interesting_parent_ids":["GO:0008150","GO:0006260","GO:0006259"],"is_obsolete":false,"name":"negative regulation of DNA replication","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"DNA replication inhibitor","type":"related"},{"name":"down regulation of DNA replication","type":"exact"},{"name":"down-regulation of DNA replication","type":"exact"},{"name":"downregulation of DNA replication","type":"exact"},{"name":"inhibition of DNA replication","type":"narrow"}],"termid":"GO:0008156","terms_by_termid":{"GO:0011000":null,"GO:0031582":null,"GO:0071807":null,"GO:0090001":null,"GO:1902681":null,"GO:1903464":null,"GO:1903467":null}}


id: MONDO:0011418
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"excluded_subClassOf","term_name":"dyslexia","termid":"MONDO:0005489"},{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dyslexia, susceptibility to, 3","secondary_identifiers":["MEDGEN:388113","UMLS:C1858662","OMIM:604254"],"synonyms":[{"name":"DYX3","type":"exact"},{"name":"dyslexia, susceptibility to, 3","type":"exact"}],"termid":"MONDO:0011418","xrefs":{"Monarch":{"xref_id":"0011418"}}}


id: PBO:0063675
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piggyBac transposable element derived 3 pseudogene 4","termid":"PBO:0063675"}


id: GO:0075163
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the symbiont organism activates, maintains or increases the frequency, rate or extent of its G-protein beta subunit-mediated signal transduction as a result of detecting molecules of its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of G-protein beta subunit-mediated signal transduction in response to host (obsolete GO:0075163)","synonyms":[{"name":"positive regulation of symbiont G-protein beta subunit-mediated signal transduction in response to host","type":"exact"}],"termid":"GO:0075163"}


id: PBO:0066272
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein Y-linked family 1 member F","termid":"PBO:0066272"}


id: MONDO:0009313
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Grubben-de Cock-Borghgraef syndrome is a rare intellectual disability syndrome characterized by pre- and postnatal growth deficiency, generalized muscular hypotonia, developmental delay (particularly of speech and language), hypotrophy of distal extremities, small and puffy hands and feet, eczematous skin and dental anomalies (i.e. small, widely-spaced teeth). Partial agenesis of the corpus callosum and a selective immunoglobulin IgG2 subclass deficiency have also been reported in some patients.","definition_xrefs":["Orphanet:2101"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Grubben-de Cock-Borghgraef syndrome","secondary_identifiers":["GARD:2576","MESH:C537621","UMLS:C2931551","MEDGEN:419108","OMIM:233810"],"synonyms":[{"name":"Grubben de Cock Borghgraef syndrome","type":"related"},{"name":"developmental delay - hypotonia - extremities hypertrophy","type":"related"},{"name":"developmental delay-hypotonia-extremities hypertrophy syndrome","type":"exact"},{"name":"growth retardation, small and puffy hands and feet, and eczema","type":"related"},{"name":"severe growth retardation, developmental delay with hypotonia, hypotrophy of the distal extremities, dental anomalies, and eczematous skin","type":"related"}],"termid":"MONDO:0009313","xrefs":{"Monarch":{"xref_id":"0009313"}}}


id: PBO:0036393
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial intermembrane space protein; involved in phospholipid metabolism Ups2 (predicted)","termid":"PBO:0036393"}


id: PBO:0063529
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDZ domain containing 11","termid":"PBO:0063529"}


id: MONDO:1012396
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"reactive perforating collagenosis, non-human animal","termid":"MONDO:1011754"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"reactive perforating collagenosis, domestic cat","secondary_identifiers":["OMIA:001476-9685"],"termid":"MONDO:1012396","xrefs":{"Monarch":{"xref_id":"1012396"}}}


id: RO:0002105
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A relation between a motor neuron and a muscle that it synapses to via a type Ib bouton.","direct_ancestors":[{"relation_name":"is_a","term_name":"synapsed_to","termid":"RO:0002120"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synapsed_via_type_Ib_bouton_to","termid":"RO:0002105"}


id: MONDO:0010856
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Polycystic kidney disease with tuberous sclerosis (PKD-TSC) is characterized by early-onset and severe polycystic kidney disease with various manifestations of tuberous sclerosis (multiple angiomyolipomas, lymphangioleiomyomatosis and periventricular calcifications of the central nervous system).","definition_xrefs":["Orphanet:88924"],"direct_ancestors":[{"relation_name":"is_a","term_name":"partial deletion of the short arm of chromosome 16","termid":"MONDO:0016894"},{"relation_name":"is_a","term_name":"familial cystic renal disease","termid":"MONDO:0019741"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"autosomal dominant polycystic kidney disease type 1 with tuberous sclerosis","secondary_identifiers":["MEDGEN:325000","GARD:9481","MESH:C536328","OMIM:600273","UMLS:C1838327","SCTID:765331004","icd11.foundation:1781576728"],"synonyms":[{"name":"PKDTS","type":"related"},{"name":"chromosome 16P13.3 deletion syndrome, distal","type":"related"},{"name":"polycystic kidney disease, infantile severe, with tuberous sclerosis","type":"related"},{"name":"polycystic kidneys, severe infantile with tuberous sclerosis","type":"related"},{"name":"tuberous sclerosis polycystic kidney disease contiguous gene syndrome","type":"related"},{"name":"tuberous sclerosis/polycystic kidney disease contiguous gene syndrome","type":"exact"}],"termid":"MONDO:0010856","xrefs":{"Monarch":{"xref_id":"0010856"}}}


id: PBO:0067326
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 417, pseudogene","termid":"PBO:0067326"}


id: GO:0071524
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of pyrrolysine, N6-{[(2R,3R)-3-methyl-3,4-dihydro-2H-pyrrol-2-yl]carbonyl}-L-lysine.","definition_xrefs":["GOC:dh","PMID:17204561"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid biosynthetic process","termid":"GO:0008652"},{"relation_name":"is_a","term_name":"modified amino acid biosynthetic process","termid":"GO:0042398"},{"relation_name":"is_a","term_name":"amide biosynthetic process","termid":"GO:0043604"},{"relation_name":"is_a","term_name":"pyrrolysine metabolic process","termid":"GO:0071525"},{"relation_name":"is_a","term_name":"proteinogenic amino acid biosynthetic process","termid":"GO:0170038"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006520"],"is_obsolete":false,"name":"pyrrolysine biosynthetic process","synonyms":[{"name":"monomethylamine methyltransferase cofactor lysine adduct biosynthetic process","type":"exact"},{"name":"pyrrolysine anabolism","type":"exact"},{"name":"pyrrolysine biosynthesis","type":"exact"},{"name":"pyrrolysine formation","type":"exact"},{"name":"pyrrolysine synthesis","type":"exact"}],"termid":"GO:0071524"}


id: GO:0021647
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A developmental process, independent of morphogenetic (shape) change, that is required for the vestibulocochlear nerve to attain its fully functional state. This sensory nerve innervates the membranous labyrinth of the inner ear. The vestibular branch innervates the vestibular apparatus that senses head position changes relative to gravity. The auditory branch innervates the cochlear duct, which is connected to the three bony ossicles which transduce sound waves into fluid movement in the cochlea.","definition_xrefs":["GOC:jid","GO_REF:0000021","GOC:dgh","ISBN:0838580343","GOC:cls","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve maturation","termid":"GO:0021605"},{"relation_name":"part_of","term_name":"vestibulocochlear nerve development","termid":"GO:0021562"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vestibulocochlear nerve maturation","synonyms":[{"name":"CN VIII maturation","type":"related"},{"name":"auditory nerve maturation","type":"related"}],"termid":"GO:0021647"}


id: MONDO:1010924
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Muscular dystrophy, Duchenne type that occurs in domestic cat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"muscular dystrophy, Duchenne type, non-human animal","termid":"MONDO:1010199"},{"relation_name":"is_a","term_name":"muscular dystrophy, domestic cat","termid":"MONDO:1010912"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"muscular dystrophy, Duchenne type, domestic cat","secondary_identifiers":["OMIA:001081-9685"],"termid":"MONDO:1010924","xrefs":{"Monarch":{"xref_id":"1010924"}}}


id: GO:0002354
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process leading to negative selection of B cells in the bone marrow.","definition_xrefs":["GOC:jal"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central B cell selection","termid":"GO:0002340"},{"relation_name":"is_a","term_name":"B cell negative selection","termid":"GO:0002352"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"central B cell negative selection","synonyms":[{"name":"central B lymphocyte negative selection","type":"exact"},{"name":"central B-cell negative selection","type":"exact"},{"name":"central B-lymphocyte negative selection","type":"exact"}],"termid":"GO:0002354"}


id: PBO:0088334
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein with a role in clearing protein aggregates","termid":"PBO:0088334"}


id: GO:0015644
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binds to a lipoprotein toxin, which is usually derived from a microorganism, thereby neutralizing it.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete lipoprotein antitoxin (obsolete GO:0015644)","synonyms":[{"name":"lipoprotein antitoxin","type":"exact"}],"termid":"GO:0015644"}


id: MONDO:0859210
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"chromosomal disorder","termid":"MONDO:0019040"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 16q12 duplication syndrome","secondary_identifiers":["OMIM:619649","UMLS:C5562082","MEDGEN:1794292"],"termid":"MONDO:0859210","xrefs":{"Monarch":{"xref_id":"0859210"}}}


id: MONDO:0025376
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An insect-borne reovirus infection of horses, mules and donkeys in Africa and the Middle East; characterized by pulmonary edema, cardiac involvement, and edema of the head and neck.","definition_xrefs":["MESH:D000355"],"direct_ancestors":[{"relation_name":"is_a","term_name":"horse disease","termid":"MONDO:0024950"},{"relation_name":"is_a","term_name":"Reoviridae infectious disease, non-human animal","termid":"MONDO:0700095"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"African horse sickness","synonyms":[{"name":"African Horsesickness","type":"related"},{"name":"African Horsesicknesses","type":"related"},{"name":"African horse Sicknesses","type":"related"},{"name":"Horsesickness, African","type":"related"},{"name":"Horsesicknesses, African","type":"related"},{"name":"Plagues, equine","type":"related"},{"name":"Sicknesses, African horse","type":"related"},{"name":"equine Plagues","type":"related"},{"name":"equine plague","type":"related"},{"name":"horse Sicknesses, African","type":"related"},{"name":"horse sickness, African","type":"related"},{"name":"plague, equine","type":"related"},{"name":"sickness, African horse","type":"related"}],"termid":"MONDO:0025376","xrefs":{"Monarch":{"xref_id":"0025376"}}}


id: MONDO:0019491
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Rare intellectual disability.","gene_count":0,"genotype_count":0,"name":"obsolete rare intellectual disability (obsolete MONDO:0019491)","secondary_identifiers":["Orphanet:87277"],"synonyms":[{"name":"rare intellectual disability","type":"exact"}],"termid":"MONDO:0019491","xrefs":{"Monarch":{"xref_id":"0019491"}}}


id: MONDO:0012621
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Deafness-infertility syndrome (DIS) is a very rare syndrome associating sensorineural deafness and male infertility.","definition_xrefs":["Orphanet:94064"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"partial deletion of the long arm of chromosome 15","termid":"MONDO:0016913"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deafness-infertility syndrome","secondary_identifiers":["UMLS:C1970187","MEDGEN:370197","MESH:C567010","OMIM:611102","GARD:11911","icd11.foundation:1430704280","ICD9:758.39","SCTID:700489002"],"synonyms":[{"name":"DIS","type":"exact"},{"name":"chromosome 15Q15.3 deletion syndrome","type":"related"},{"name":"deafness and male infertility","type":"exact"},{"name":"deafness, sensorineural, and Male infertility","type":"related"},{"name":"deafness-infertility syndrome","type":"exact"},{"name":"dis","type":"exact"},{"name":"sensorineural deafness and male infertility","type":"related"}],"termid":"MONDO:0012621","xrefs":{"Monarch":{"xref_id":"0012621"}}}


id: GO:1902959
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of aspartic-type endopeptidase activity involved in amyloid precursor protein catabolic process.","definition_xrefs":["PMID:24577224","GOC:sjp","GO_REF:0000059","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of aspartic-type endopeptidase activity involved in amyloid precursor protein catabolic process (obsolete GO:1902959)","synonyms":[{"name":"regulation of aspartate protease activity involved in APP catabolic process","type":"exact"},{"name":"regulation of aspartate protease activity involved in APP catabolism","type":"exact"},{"name":"regulation of aspartate protease activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"regulation of aspartate protease activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"regulation of aspartate protease activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"regulation of aspartate protease activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"regulation of aspartic endopeptidase activity involved in APP catabolic process","type":"exact"},{"name":"regulation of aspartic endopeptidase activity involved in APP catabolism","type":"exact"},{"name":"regulation of aspartic endopeptidase activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"regulation of aspartic endopeptidase activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"regulation of aspartic endopeptidase activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"regulation of aspartic endopeptidase activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"regulation of aspartic protease activity involved in APP catabolic process","type":"exact"},{"name":"regulation of aspartic protease activity involved in APP catabolism","type":"exact"},{"name":"regulation of aspartic protease activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"regulation of aspartic protease activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"regulation of aspartic protease activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"regulation of aspartic protease activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"regulation of aspartic-type endopeptidase activity involved in APP catabolic process","type":"exact"},{"name":"regulation of aspartic-type endopeptidase activity involved in APP catabolism","type":"exact"},{"name":"regulation of aspartic-type endopeptidase activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"regulation of aspartic-type endopeptidase activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"regulation of aspartic-type endopeptidase activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"regulation of aspartyl protease activity involved in APP catabolic process","type":"exact"},{"name":"regulation of aspartyl protease activity involved in APP catabolism","type":"exact"},{"name":"regulation of aspartyl protease activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"regulation of aspartyl protease activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"regulation of aspartyl protease activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"regulation of aspartyl protease activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"regulation of carboxyl protease activity involved in APP catabolic process","type":"exact"},{"name":"regulation of carboxyl protease activity involved in APP catabolism","type":"exact"},{"name":"regulation of carboxyl protease activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"regulation of carboxyl protease activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"regulation of carboxyl protease activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"regulation of carboxyl protease activity involved in amyloid precursor protein degradation","type":"exact"}],"termid":"GO:1902959"}


id: MONDO:0012696
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"otosclerosis","termid":"MONDO:0005349"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"otosclerosis 4","secondary_identifiers":["UMLS:C1969046","OMIM:611571","MEDGEN:369916","DOID:0060923","MESH:C566914"],"synonyms":[{"name":"OTSC4","type":"exact"},{"name":"otosclerosis 4","type":"exact"}],"termid":"MONDO:0012696","xrefs":{"Monarch":{"xref_id":"0012696"}}}


id: PBO:0084730
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial inner membrane transporter; 2-oxodicarboxylate transporter, exports 2-oxoadipate and 2-oxoglutarate from the mitochondrial matrix to the cytosol for lysine and glutamate biosynthesis and lysine catabolism; suppresses, in multicopy, an fmc1 null mutation; ODC1 has a paralog, ODC2, that arose from the whole genome duplication","termid":"PBO:0084730"}


id: GO:0019182
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the energy-independent facilitated diffusion of a chloride ion through a transmembrane channel that opens when bound to histamine.","definition_xrefs":["GOC:mtg_transport","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chloride channel activity","termid":"GO:0005254"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"histamine-gated chloride channel activity","termid":"GO:0019182"}


id: PBO:0067184
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 242, pseudogene","termid":"PBO:0067184"}


id: PBO:0078537
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 29","termid":"PBO:0078537"}


id: PBO:0011996
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH/NADPH dependent indole-3-acetaldehyde reductase","termid":"PBO:0011996"}


id: PBO:0011432
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinetochore protein Sos7","termid":"PBO:0011432"}


id: MONDO:0035252
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A rare coronary artery congenital malformation characterized by an anomalous origin of the left (ALCAPA) or right (ARCAPA) coronary artery from the pulmonary artery, with variable clinical presentation, ranging from asymptomatic to early heart failure and death depending on the degree of development of collateral circulation between the left and right coronary artery systems, as well as the pressure level of the pulmonary artery. Infants typically present with feeding difficulties, failure to thrive, dyspnea, irritability, hyperhidrosis, heart murmurs, tachypnea, tachycardia and/or chest pain while adults usually associate dyspnea, chest pain, syncope, and intolerance to physical exercise. Sudden death may occur due to congestive heart failure, myocardial infarction, valvular insufficiencies or ventricular arrhythmias. The majority of cases reported are of an ALCAPA, while ARCAPA is rarely observed. [Orphanet:541507]","definition_xrefs":["Orphanet:541507"],"gene_count":0,"genotype_count":0,"name":"obsolete anomalous origin of coronary artery from the pulmonary artery (obsolete MONDO:0035252)","secondary_identifiers":["ICD10CM:Q24.5","icd11.foundation:1862930314"],"termid":"MONDO:0035252","xrefs":{"Monarch":{"xref_id":"0035252"}}}


id: FYPO:0001489
data:
  {"alleles_by_uniquename":{"SJAG_00409:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00409","name":"gpd1delta","uniquename":"SJAG_00409:allele-1"},"SJAG_00871:allele-1":{"allele_type":"amino_acid_mutation","description":"cut3-T19E","gene_uniquename":"SJAG_00871","name":"cut3-T19E","uniquename":"SJAG_00871:allele-1"},"SJAG_04332:allele-1":{"allele_type":"amino_acid_mutation","description":"I30T,T572P","gene_uniquename":"SJAG_04332","name":"cdc25-D9","uniquename":"SJAG_04332:allele-1"},"SJAG_04464:allele-1":{"allele_type":"amino_acid_mutation","description":"R152C","gene_uniquename":"SJAG_04464","name":"pim1-R152C","synonyms":[{"name":"Inferred CDK-phospho-mimic mutation","reference":"PMID:28954740","type":"exact"}],"uniquename":"SJAG_04464:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[119655],"is_not":false,"summary":null,"term":"FYPO:0001489"}],"single_locus_phenotype":[{"annotations":[119680],"is_not":false,"summary":null,"term":"FYPO:0001489"},{"annotations":[119568],"is_not":false,"rel_names":["is_a","has_part"],"summary":null,"term":"FYPO:0007701"},{"annotations":[119652],"is_not":false,"rel_names":["has_part","is_a"],"summary":null,"term":"FYPO:0003976"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a cell is inviable in the phase of the life cycle during which wild type cells undergo vegetative growth.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable cell","termid":"FYPO:0000049"},{"relation_name":"is_a","term_name":"cellular physical quality phenotype during vegetative growth","termid":"FYPO:0001321"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00409":null,"SJAG_00871":null,"SJAG_04332":null,"SJAG_04464":null},"genotype_count":4,"genotypes_by_uniquename":{"cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cdc25-D9(I30T,T572P aa)","display_uniquename":"cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04332:allele-1","expression":"Not assayed or wild type"}]}]},"cut3-T19E-cut3-T19E-amino_acid_mutation-expression-not_assayed_or_wild_type__pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cut3-T19E(aa) pim1-R152C(aa)","display_uniquename":"cut3-T19E-cut3-T19E-amino_acid_mutation-expression-not_assayed_or_wild_type__pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00871:allele-1","expression":"Not assayed or wild type"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_04464:allele-1","expression":"Not assayed or wild type"}]}]},"gpd1delta":{"display_name":"gpd1delta","display_uniquename":"gpd1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00409:allele-1","expression":"Null"}]}]},"pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"pim1-R152C(aa)","display_uniquename":"pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04464:allele-1","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000004","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_04464","SJAG_00871"],"name":"inviable vegetative cell","references_by_uniquename":{"PMID:25866389":null,"PMID:28954740":null,"PMID:37164017":null},"single_locus_annotated_genes":["SJAG_04332","SJAG_04464","SJAG_00409"],"single_locus_genotype_uniquenames":["pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type","cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type","gpd1delta"],"synonyms":[{"name":"inviable cell during vegetative growth","type":"exact"},{"name":"inviable vegetative cell during mitotic cell cycle","type":"related"},{"name":"lethal in vegetative cell","type":"exact"}],"termid":"FYPO:0001489","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000005":null,"FYECO:0000126":null,"FYECO:0000137":null,"FYPO:0001489":null,"FYPO:0003976":null,"FYPO:0007701":null,"FYPO_EXT:0000001":null}}


id: MONDO:1010410
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Epilepsy that occurs in white-tufted-ear marmoset.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epilepsy, non-human animal","termid":"MONDO:1010001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epilepsy, white-tufted-ear marmoset","secondary_identifiers":["OMIA:000344-9483"],"termid":"MONDO:1010410","xrefs":{"Monarch":{"xref_id":"1010410"}}}


id: MONDO:0041008
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete contact dermatitis caused by poison oak (obsolete MONDO:0041008)","secondary_identifiers":["SCTID:200824008"],"synonyms":[{"name":"contact dermatitis caused by poison oak","type":"exact"},{"name":"contact dermatitis due to poison oak","type":"exact"}],"termid":"MONDO:0041008","xrefs":{"Monarch":{"xref_id":"0041008"}}}


id: GO:0032221
data:
  {"annotated_genes":["SJAG_03884","SJAG_01110","SJAG_00349","SJAG_01804","SJAG_04758","SJAG_00581"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[73149,73373,76948,94143,95810,109844],"is_not":false,"summary":null,"term":"GO:0032221"}]},"cv_name":"cellular_component","definition":"A eukaryotically conserved histone deacetylase complex which deacetylates histones across gene coding regions. Composed of a catalytic histone deacetylase subunit, a chromodomain protein, a SIN3 family co-repressor, and a WD repeat protein (Clr6p, Alp13p, Pst2p, and Prw1p respectively in Schizosaccharomyces; Rpd3p, Sin3p, Ume1p, Rco1p and Eaf3 in Saccharomyces; homologs thereof in other species).","definition_xrefs":["PMID:12773392","GOC:vw","PMID:17450151"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Sin3-type complex","termid":"GO:0070822"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00349":null,"SJAG_00581":null,"SJAG_01110":null,"SJAG_01804":null,"SJAG_03884":null,"SJAG_04758":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"part_of","termid":"GO:0005654"}],"interesting_parent_ids":["GO:0005694","GO:0005634","GO:0005654","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"Rpd3S complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0000509"],"synonyms":[{"name":"Clr6 histone deacetylase complex II","type":"exact"},{"name":"Clr6 histone deacetylase complex II'","type":"exact"},{"name":"Clr6-CII complex","type":"exact"},{"name":"Clr6S complex","type":"exact"},{"name":"Rpd3C(S)","type":"exact"},{"name":"Rpd3S","type":"exact"},{"name":"Sin3S","type":"exact"}],"termid":"GO:0032221","terms_by_termid":{"GO:0032221":null}}


id: GO:0002470
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a plasmacytoid dendritic cell expresses antigen (peptide or lipid) on its cell surface in association with an MHC protein complex.","definition_xrefs":["ISBN:0781735149","GOC:add","PMID:15771591"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dendritic cell antigen processing and presentation","termid":"GO:0002468"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"plasmacytoid dendritic cell antigen processing and presentation","termid":"GO:0002470"}


id: PBO:0087351
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Spindle positioning factor; orients astral microtubules, connecting them to actin cables at the cortex with Bim1p and Myo2, resulting in proper spindle positioning; targeted for StuBL-dependent degradation at kinetochores by Slx5p-Slx8p, ensuring chromosome transmission fidelity and correct spindle positioning; role in karyogamy; localizes to the shmoo tip, the growing bud-tip, the nucleus, the kinetochore, the spindle and microtubules; homolog of adenomatous polyposis coli","termid":"PBO:0087351"}


id: MONDO:0003023
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant vascular neoplasm arising from the aorta.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aortic malignant tumor","termid":"MONDO:0004539"},{"relation_name":"is_a","term_name":"angiosarcoma","termid":"MONDO:0016982"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"aorta angiosarcoma","secondary_identifiers":["UMLS:C1332312","MEDGEN:231071","NCIT:C5376","DOID:4510"],"synonyms":[{"name":"angiosarcoma (disease) of aorta","type":"exact"},{"name":"angiosarcoma of aorta","type":"exact"},{"name":"angiosarcoma of the aorta","type":"exact"},{"name":"aorta angiosarcoma (disease)","type":"exact"},{"name":"aortic angiosarcoma","type":"exact"},{"name":"aortic hemangiosarcoma","type":"exact"},{"name":"hemangiosarcoma of aorta","type":"exact"},{"name":"hemangiosarcoma of the aorta","type":"exact"}],"termid":"MONDO:0003023","xrefs":{"Monarch":{"xref_id":"0003023"}}}


id: GO:0021825
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process where neuronal precursors migrate tangentially in the cerebral cortex, primarily guided through physical cell-cell interactions.","definition_xrefs":["GO_REF:0000021","GOC:cls","GOC:dph","GOC:jid","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"substrate-dependent cell migration","termid":"GO:0006929"},{"relation_name":"is_a","term_name":"cerebral cortex tangential migration","termid":"GO:0021800"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"substrate-dependent cerebral cortex tangential migration","termid":"GO:0021825"}


id: MONDO:1012634
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any difference of sexual differentiation that occurs in domestic cats and is characterized by the presence of testicular tissue in the gonads with a female karyotype (XX) and absence of the SRY gene.","definition_xrefs":["OMIA:000901-9685"],"direct_ancestors":[{"relation_name":"is_a","term_name":"difference of sexual differentiation, non-human animal","termid":"MONDO:0700105"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"XX difference of sexual development, domestic cat","termid":"MONDO:1012634","xrefs":{"Monarch":{"xref_id":"1012634"}}}


id: PBO:0047779
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FOXD1 antisense RNA 1","termid":"PBO:0047779"}


id: GO:0060813
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a mRNA is transported to, and maintained in the anterior portion of the oocyte and/or syncytial embryo contributing to the specification of the anterior/posterior axis.","definition_xrefs":["GOC:dph","GOC:sdb_2009","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular mRNA localization involved in anterior/posterior axis specification","termid":"GO:0060811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"anterior mRNA localization involved in anterior/posterior axis specification","synonyms":[{"name":"anterior mRNA localisation involved in anterior/posterior axis specification","type":"exact"}],"termid":"GO:0060813"}


id: PBO:0111646
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"negative cofactor 2 complex subunit Bur6","termid":"PBO:0111646"}


id: MONDO:1010530
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cleft palate that occurs in cattle.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cleft palate, non-human animal","termid":"MONDO:1010037"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cleft palate, cattle","secondary_identifiers":["OMIA:000197-9913"],"termid":"MONDO:1010530","xrefs":{"Monarch":{"xref_id":"1010530"}}}


id: MONDO:0017830
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Severe Canavan disease (CD) is a rapidly progressing neurodegenerative disorder characterized by leukodystrophy with macrocephaly, severe developmental delay and hypotonia.","definition_xrefs":["Orphanet:314911"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Canavan disease","termid":"MONDO:0010079"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0005066"],"is_obsolete":false,"name":"severe Canavan disease","secondary_identifiers":["UMLS:C5575558","GARD:17437","MEDGEN:1826002"],"synonyms":[{"name":"infantile Canavan disease","type":"exact"},{"name":"neonatal Canavan disease","type":"exact"}],"termid":"MONDO:0017830","xrefs":{"Monarch":{"xref_id":"0017830"}}}


id: PBO:0039211
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aldo-keto reductase family 1 member C2","termid":"PBO:0039211"}


id: GO:0038159
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by a the C-X-C chemokine type 4 receptor on the surface of a cell binding to one of it's physiological ligands, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:nhn","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemokine-mediated signaling pathway","termid":"GO:0070098"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"C-X-C chemokine receptor CXCR4 signaling pathway","synonyms":[{"name":"CXCR4 signaling pathway","type":"exact"}],"termid":"GO:0038159"}


id: GO:0055087
data:
  {"annotated_genes":["SJAG_01218","SJAG_03805","SJAG_04118"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[75813,79530,109205],"is_not":false,"summary":null,"term":"GO:0055087"}]},"cv_name":"cellular_component","definition":"A protein complex that regulates RNA degradation by the exosome complex. In Saccharomyces the complex has a heterotetrameric stoichiometry consisting of one copy each of Ski2p and Ski3 and two copies of Ski8p.","definition_xrefs":["PMID:10744028","PMID:18042677","GOC:mcc","PMID:15703439","PMID:16043509"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01218":null,"SJAG_03805":null,"SJAG_04118":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005737"],"is_obsolete":false,"name":"Ski complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:Ski_complex"],"termid":"GO:0055087","terms_by_termid":{"GO:0055087":null}}


id: MONDO:0020802
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A neoplasm composed of basal cells that metastasizes to other anatomic sites.","definition_xrefs":["NCIT:C7586"],"gene_count":0,"genotype_count":0,"name":"obsolete basal cell cancer (obsolete MONDO:0020802)","termid":"MONDO:0020802","xrefs":{"Monarch":{"xref_id":"0020802"}}}


id: MONDO:0850149
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A kidney benign neoplasm that is located in the kidney cortex.","definition_xrefs":["DOID:0080615"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kidney benign neoplasm","termid":"MONDO:0002513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"nephroma","termid":"MONDO:0850149","xrefs":{"Monarch":{"xref_id":"0850149"}}}


id: GO:0042952
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A pathway of aromatic compound degradation by ortho-cleavage; one branch converts protocatechuate, derived from phenolic compounds, to beta-ketoadipate, and the other branch converts catechol, generated from various aromatic hydrocarbons, amino aromatics, and lignin monomers, also to beta-ketoadipate. Two additional steps accomplish the conversion of beta-ketoadipate to tricarboxylic acid cycle intermediates.","definition_xrefs":["GOC:jl","PMID:8905091"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catabolic process","termid":"GO:0009056"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"beta-ketoadipate pathway","synonyms":[{"name":"ortho-cleavage pathway","type":"broad"}],"termid":"GO:0042952"}


id: MONDO:0011498
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A schizophrenia that has material basis in a mutation of DISC1 on chromosome 1q42.2.","definition_xrefs":["DOID:0070085"],"direct_ancestors":[{"relation_name":"is_a","term_name":"schizophrenia, susceptibility to","termid":"MONDO:0100182"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"schizophrenia 9","secondary_identifiers":["UMLS:C1858050","OMIM:604906","MEDGEN:346728"],"synonyms":[{"name":"SCZD9","type":"exact"},{"name":"schizophrenia 9","type":"exact"},{"name":"schizophrenia 9 with or without an affective disorder","type":"related"},{"name":"schizophrenia 9, susceptibility to","type":"exact"},{"name":"schizophrenia susceptibility locus, chromosome 1Q42-related","type":"related"},{"name":"schizophrenia type 9","type":"exact"}],"termid":"MONDO:0011498","xrefs":{"Monarch":{"xref_id":"0011498"}}}


id: MONDO:0017434
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete syndrome with limb duplication, polydactyly, syndactyly, and/or hyperphalangy (obsolete MONDO:0017434)","secondary_identifiers":["Orphanet:294959","icd11.foundation:1911144861"],"termid":"MONDO:0017434","xrefs":{"Monarch":{"xref_id":"0017434"}}}


id: MONDO:0018747
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Epidermolysis bullosa acquisita (EBA) is a subepidermal bullous dermatosis of autoimmune origin that was named as a result of its resemblance to hereditary forms of epidermolysis bullosa (HEB), most notably dystrophic HEB.","definition_xrefs":["Orphanet:46487"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epidermolysis bullosa","termid":"MONDO:0006541"},{"relation_name":"is_a","term_name":"autoimmune bullous skin disease","termid":"MONDO:0019337"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005046"],"is_obsolete":false,"name":"acquired epidermolysis bullosa","secondary_identifiers":["ICD10CM:L12.3","MedDRA:10056508","MEDGEN:37178","NANDO:1200635","ICD9:695.19","GARD:6360","icd11.foundation:2034586329","NCIT:C84690","SCTID:2772003","UMLS:C0079293","DOID:4313","MESH:D016107","EFO:1000691"],"synonyms":[{"name":"EB acquisita","type":"related"},{"name":"EBA","type":"exact"},{"name":"acquired epidermolysis bullosa","type":"exact"},{"name":"epidermolysis bullosa Aquisita","type":"exact"},{"name":"epidermolysis bullosa acquisita","type":"exact"}],"termid":"MONDO:0018747","xrefs":{"Monarch":{"xref_id":"0018747"}}}


id: MONDO:0007367
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"febrile seizures, familial","termid":"MONDO:0000032"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"febrile seizures, familial, 1","secondary_identifiers":["MEDGEN:338959","SCTID:230432008","UMLS:C1852577","OMIM:121210","MESH:C565162","ICD9:780.39","DOID:0111307"],"synonyms":[{"name":"FEB1","type":"exact"},{"name":"convulsions, familial febrile","type":"related"},{"name":"convulsions, familial febrile, 1","type":"related"},{"name":"febrile seizures, familial, 1","type":"exact"}],"termid":"MONDO:0007367","xrefs":{"Monarch":{"xref_id":"0007367"}}}


id: PATO:0000159
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000159 absolute incidence (obsolete PATO:0000159)","termid":"PATO:0000159"}


id: MONDO:1011228
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Entropion that occurs in pig.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"entropion, non-human animal","termid":"MONDO:1010323"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"entropion, pig","secondary_identifiers":["OMIA:000337-9823"],"termid":"MONDO:1011228","xrefs":{"Monarch":{"xref_id":"1011228"}}}


id: GO:1902288
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of defense response to oomycetes.","definition_xrefs":["GOC:TermGenie","PMID:16040633"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to biotic stimulus","termid":"GO:0002831"},{"relation_name":"is_a","term_name":"regulation of defense response","termid":"GO:0031347"},{"relation_name":"is_a","term_name":"regulation of response to external stimulus","termid":"GO:0032101"},{"relation_name":"regulates","term_name":"defense response to oomycetes","termid":"GO:0002229"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of defense response to oomycetes","termid":"GO:1902288"}


id: GO:0001606
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete GPR37/endothelin B-like receptor activity (obsolete GO:0001606)","synonyms":[{"name":"GPR37/endothelin B-like receptor activity","type":"exact"}],"termid":"GO:0001606"}


id: GO:0061402
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that increases the frequency, rate or extent of transcription from an RNA polymerase II promoter as a result of a pH stimulus with pH < 7.","definition_xrefs":["GOC:go_curators","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transcription from RNA polymerase II promoter in response to acidic pH (obsolete GO:0061402)","synonyms":[{"name":"positive regulation of transcription from RNA polymerase II promoter in response to acidity","type":"broad"}],"termid":"GO:0061402"}


id: PBO:0046490
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"erythroferrone","termid":"PBO:0046490"}


id: GO:0043499
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binding to a component on the surface of a eukaryotic cell.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete eukaryotic cell surface binding (obsolete GO:0043499)","synonyms":[{"name":"eukaryotic cell surface binding","type":"exact"}],"termid":"GO:0043499"}


id: GO:0051715
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The killing by an organism of a cell in another organism by means of the rupture of cell membranes and the loss of cytoplasm.","definition_xrefs":["GOC:ai","PMID:22484288"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytolysis","termid":"GO:0019835"},{"relation_name":"is_a","term_name":"killing of cells of another organism","termid":"GO:0031640"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cytolysis in another organism","secondary_identifiers":["GO:0044649","GO:0001901"],"synonyms":[{"name":"cytolysis in other organism","type":"exact"},{"name":"cytolysis of cells of another organism","type":"exact"},{"name":"envenomation resulting in cytolysis in another organism","type":"narrow"},{"name":"envenomation resulting in cytolysis in other organism","type":"narrow"}],"termid":"GO:0051715"}


id: MONDO:0021627
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A capillary hemangioma arising from the eyelid.","definition_xrefs":["NCIT:C4357"],"direct_ancestors":[{"relation_name":"is_a","term_name":"capillary hemangioma","termid":"MONDO:0002407"},{"relation_name":"is_a","term_name":"skin hemangioma","termid":"MONDO:0003110"},{"relation_name":"is_a","term_name":"benign eyelid neoplasm","termid":"MONDO:0021605"},{"relation_name":"is_a","term_name":"neurovascular disorder","termid":"MONDO:0043218"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0005093"],"is_obsolete":false,"name":"eyelid capillary hemangioma","secondary_identifiers":["UMLS:C0339110","SCTID:231828003","MEDGEN:87379"],"synonyms":[{"name":"capillary angioma of eyelid","type":"exact"},{"name":"capillary angioma of lid","type":"exact"},{"name":"capillary angioma of the eyelid","type":"exact"},{"name":"capillary angioma of the lid","type":"exact"},{"name":"capillary hemangioma of eyelid","type":"exact"},{"name":"capillary hemangioma of lid","type":"exact"},{"name":"capillary hemangioma of the eyelid","type":"exact"},{"name":"capillary hemangioma of the lid","type":"exact"},{"name":"eyelid capillary angioma","type":"exact"},{"name":"eyelid capillary hemangioma","type":"exact"}],"termid":"MONDO:0021627","xrefs":{"Monarch":{"xref_id":"0021627"}}}


id: MONDO:0007391
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hip deformity in which the femoral neck leans forward resulting in a decrease in the angle between femoral neck and its shaft. It may be congenital often syndromic, acquired, or developmental.","definition_xrefs":["MESH:D060905"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coxa vara","secondary_identifiers":["MEDGEN:1790477","HP:0002812","EFO:1001298","UMLS:C5551440","OMIM:122750"],"synonyms":[{"name":"coxa vara","type":"exact"},{"name":"coxa vara (disease)","type":"exact"},{"name":"coxa vara, congenital","type":"related"}],"termid":"MONDO:0007391","xrefs":{"Monarch":{"xref_id":"0007391"}}}


id: PBO:0041640
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium voltage-gated channel subunit alpha1 G","termid":"PBO:0041640"}


id: FYPO:0002981
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of chromatin binding by a gene product (usually a protein) in a mutant is increased during a cellular response to methyl methanesulfonate. The affected gene product may be encoded by the mutated gene, or by a different gene, and may normally bind DNA, protein, or both in chromatin.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased chromatin binding","termid":"FYPO:0002980"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000702"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000702","FYPO:0001985","FYPO:0000707","FYPO:0000652"],"is_obsolete":false,"name":"increased chromatin binding during cellular response to methyl methanesulfonate","synonyms":[{"name":"increased chromatin binding during cellular response to MMS","type":"exact"},{"name":"increased chromatin binding during cellular response to methyl methanesulphonate","type":"exact"}],"termid":"FYPO:0002981"}


id: MONDO:0004971
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant tumor arising from the epithelial cells. Microscopically, the neoplastic epithelial cells form cylindrical spatial configurations (cribriform or classic type of adenoid cystic carcinoma), cordlike structures (tubular type of adenoid cystic carcinoma), or solid structures (basaloid variant of adenoid cystic carcinoma). Adenoid cystic carcinomas mostly occur in the salivary glands. Other primary sites of involvement include the lacrimal gland, the larynx, and the lungs. Adenoid cystic carcinomas spread along nerve sheaths, resulting in severe pain, and they tend to recur. Lymph node metastases are unusual; hematogenous tumor spread is characteristic.","definition_xrefs":["NCIT:C2970"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenocarcinoma","termid":"MONDO:0004970"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"adenoid cystic carcinoma","secondary_identifiers":["MEDGEN:41382","DOID:0080202","UMLS:C0010606","ICDO:8200/3","icd11.foundation:2127202862","MESH:D003528","GARD:5743","EFO:0000231","ONCOTREE:ACYC"],"synonyms":[{"name":"adenocystic carcinoma","type":"exact"},{"name":"adenoid cystic cancer","type":"exact"},{"name":"adenoid cystic carcinoma","type":"exact"},{"name":"cribriform carcinoma","type":"related"},{"name":"cylindroid adenocarcinoma","type":"exact"},{"name":"cylindroma","type":"related"}],"termid":"MONDO:0004971","xrefs":{"Monarch":{"xref_id":"0004971"}}}


id: PBO:0087297
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Single-stranded DNA endonuclease (with Rad1p); cleaves single-stranded DNA during nucleotide excision repair and double-strand break repair; subunit of Nucleotide Excision Repair Factor 1 (NEF1); homolog of human ERCC1 protein","termid":"PBO:0087297"}


id: FYPO:0004703
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetatively growing cell is viable, is longer and has a larger volume than normal, and is curved along the long axis. In a curved cell, the long axis follows a smooth bend rather than a straight line.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viable curved elongated vegetative cell","termid":"FYPO:0002215"},{"relation_name":"is_a","term_name":"viable swollen vegetative cell with abnormal cell shape","termid":"FYPO:0002402"},{"relation_name":"is_a","term_name":"viable swollen elongated vegetative cell","termid":"FYPO:0002479"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000005","FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0000004"],"is_obsolete":false,"name":"viable curved, elongated, swollen vegetative cell","synonyms":[{"name":"curved elongated swollen viable cell","type":"exact"},{"name":"viable curved swollen elongated cell","type":"exact"},{"name":"viable curved, elongated, swollen cell during vegetative growth","type":"exact"},{"name":"viable curved, elongated, swollen vegetative cell during mitotic cell cycle","type":"related"}],"termid":"FYPO:0004703"}


id: PBO:0040989
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BOLA2-SMG1P6 readthrough","termid":"PBO:0040989"}


id: PBO:0089017
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"porphobilinogen synthase Hem2","termid":"PBO:0089017"}


id: GO:0120284
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to 2-amino-3-(1H-indol-3-yl)propanoic acid.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid binding","termid":"GO:0016597"},{"relation_name":"is_a","term_name":"carboxylic acid binding","termid":"GO:0031406"},{"relation_name":"is_a","term_name":"cation binding","termid":"GO:0043169"},{"relation_name":"is_a","term_name":"heterocyclic compound binding","termid":"GO:1901363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"tryptophan binding","synonyms":[{"name":"Trp binding","type":"exact"}],"termid":"GO:0120284"}


id: MONDO:0021498
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign neoplasm that involves the placenta.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"uterine benign neoplasm","termid":"MONDO:0000632"},{"relation_name":"is_a","term_name":"placenta neoplasm","termid":"MONDO:0021218"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benign neoplasm of placenta","secondary_identifiers":["MEDGEN:146350","UMLS:C0686274","EFO:1001443","NCIT:C8545","ICD9:219.8","SCTID:92297008","icd11.foundation:194589255"],"synonyms":[{"name":"benign neoplasm of the placenta","type":"exact"},{"name":"benign placenta neoplasm","type":"exact"},{"name":"benign placenta tumor","type":"exact"},{"name":"benign placenta tumour","type":"exact"},{"name":"benign placental neoplasm","type":"exact"},{"name":"benign placental tumor","type":"exact"},{"name":"benign placental tumour","type":"exact"},{"name":"benign tumor of placenta","type":"exact"},{"name":"benign tumor of the placenta","type":"exact"},{"name":"benign tumour of placenta","type":"exact"},{"name":"benign tumour of the placenta","type":"exact"},{"name":"placenta benign neoplasm","type":"exact"},{"name":"placental neoplasms, benign","type":"exact"}],"termid":"MONDO:0021498","xrefs":{"Monarch":{"xref_id":"0021498"}}}


id: PR:000044705
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A histone H3.3, initiator methionine removed K9-methylated form (Schizosaccharomyces pombe) whose methylation type is trimethylation. Example: UniProtKB:P10651-1, 2-136, Lys-10, MOD:00083.","definition_xrefs":["PMID:23849629","PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hht3/Me(K9)","termid":"PR:000027604"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H3.3, initiator methionine removed K9-trimethylated form (Schizosaccharomyces pombe)","pombase_gene_id":"SPBC1105.11c","synonyms":[{"name":"Spom-hht3/InitMet-/K9me3","type":"exact"}],"termid":"PR:000044705"}


id: MONDO:0014880
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Duane syndrome type 3 is a disorder of eye movement.The affected eye, or eyes, has limited ability to move both inward toward the nose and outward toward the ears. The eye opening narrows and the eyeball pulls in when looking inward toward the nose. About 15 percent of all cases of Duane syndrome are type 3. Most cases occur without other signs and symptoms.In most people with Duane syndrome type 3, the cause is unknown; but it can sometimes be caused by mutations in the CHN1 gene and inherited in an autosomal dominant fashion.","definition_xrefs":["GARD:0010691"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Duane retraction syndrome","termid":"MONDO:0007473"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Duane retraction syndrome 3 with or without deafness","secondary_identifiers":["UMLS:C4310752","OMIM:617041","MEDGEN:934719","GARD:10691"],"synonyms":[{"name":"DURS3","type":"exact"},{"name":"Duane retraction syndrome 3","type":"related"},{"name":"Duane retraction syndrome 3 with or without deafness","type":"exact"},{"name":"Duane retraction syndrome caused by mutation in MAFB","type":"exact"},{"name":"Duane syndrome type 3","type":"related"},{"name":"MAFB Duane retraction syndrome","type":"exact"}],"termid":"MONDO:0014880","xrefs":{"Monarch":{"xref_id":"0014880"}}}


id: PBO:0077648
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TNF alpha induced protein 8","termid":"PBO:0077648"}


id: MONDO:0018360
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A self-limited skin rash that appears in the neonatal period and usually resolves in four to six months after birth. It is caused by placental transfer of maternal autoantibodies, usually anti-Ro antibody. In a minority of cases, it is associated with congenital heart block, hepatitis, or thrombocytopenia. The mothers of the affected babies may be asymptomatic or suffer from systemic lupus erythematosus, Sjogren's syndrome, or rheumatoid arthritis.","definition_xrefs":["NCIT:C99236"],"direct_ancestors":[{"relation_name":"is_a","term_name":"systemic lupus erythematosus","termid":"MONDO:0007915"},{"relation_name":"is_a","term_name":"secondary neonatal autoimmune disease","termid":"MONDO:0018356"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"neonatal lupus erythematosus","secondary_identifiers":["icd11.foundation:213855225","MEDGEN:98372","SCTID:95609003","UMLS:C0409979","GARD:21647","MESH:C536397","EFO:0004537","NORD:1495","Orphanet:398124"],"synonyms":[{"name":"Neonatal Lupus","type":"exact"},{"name":"congenital lupus","type":"related"},{"name":"congenital lupus erythematosus","type":"related"},{"name":"neonatal SLE","type":"related"},{"name":"neonatal lupus","type":"related"},{"name":"neonatal lupus syndrome","type":"related"},{"name":"neonatal systemic lupus erythematosus","type":"related"}],"termid":"MONDO:0018360","xrefs":{"Monarch":{"xref_id":"0018360"}}}


id: PBO:0062872
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OTU deubiquitinase 7A","termid":"PBO:0062872"}


id: PBO:0042869
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cilia and flagella associated protein 99","termid":"PBO:0042869"}


id: GO:0035296
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the diameter of a tube.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of tube size","termid":"GO:0035150"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of tube diameter","termid":"GO:0035296"}


id: PBO:0067474
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 605, pseudogene","termid":"PBO:0067474"}


id: GO:0032163
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A septin band, i.e. a diffuse ring composed of a series of septin bars running parallel to the long axis of the cell, located at the junction between the mother cell and the germ tube (hypha) of a fungal cell growing filamentously.","definition_xrefs":["GOC:krc","GOC:mah","PMID:16151244"],"direct_ancestors":[{"relation_name":"is_a","term_name":"septin band","termid":"GO:0032158"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"hyphal septin band","termid":"GO:0032163"}


id: GO:1903640
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of gastrin-induced gastric acid secretion.","definition_xrefs":["PMID:11123201","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of gastric acid secretion","termid":"GO:0060455"},{"relation_name":"is_a","term_name":"regulation of gastrin-induced gastric acid secretion","termid":"GO:1903639"},{"relation_name":"negatively_regulates","term_name":"gastrin-induced gastric acid secretion","termid":"GO:0001698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of gastrin-induced gastric acid secretion","synonyms":[{"name":"down regulation of gastrin-induced gastric acid secretion","type":"exact"},{"name":"down-regulation of gastrin-induced gastric acid secretion","type":"exact"},{"name":"downregulation of gastrin-induced gastric acid secretion","type":"exact"},{"name":"inhibition of gastrin-induced gastric acid secretion","type":"narrow"}],"termid":"GO:1903640"}


id: GO:0140714
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that assists early maturation of nascent 60S ribosomal subunits. The complex interacts with the large ribosomal subunit rRNA via one of the components (Urb2 in S. cerevisiae) and requires a RNA helicase (Dbp6 in S. cerevisiae).","definition_xrefs":["PMID:17145778","GOC:lnp","PMID:9528757"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein folding chaperone complex","termid":"GO:0101031"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"large ribosomal subunit pre-assembly complex","termid":"GO:0140714"}


id: PBO:0041862
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"caspase 8","termid":"PBO:0041862"}


id: PBO:0048577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gamma-glutamyltransferase 1","termid":"PBO:0048577"}


id: GO:0033870
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3'-phosphoadenylyl sulfate + a thiol = adenosine 3',5'-bisphosphate + an S-alkyl thiosulfate.","definition_xrefs":["EC:2.8.2.16"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfotransferase activity","termid":"GO:0008146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0016782","GO:0003824"],"is_obsolete":false,"name":"thiol sulfotransferase activity","secondary_identifiers":["MetaCyc:THIOL-SULFOTRANSFERASE-RXN","RHEA:14637"],"synonyms":[{"name":"3'-phosphoadenylyl-sulfate:thiol S-sulfotransferase activity","type":"related"},{"name":"PAPS sulfotransferase activity","type":"broad"},{"name":"adenosine 3'-phosphate 5'-sulphatophosphate sulfotransferase activity","type":"related"}],"termid":"GO:0033870"}


id: MONDO:0010267
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"episodic muscle weakness, X-linked","secondary_identifiers":["MEDGEN:337525","UMLS:C1846173","MESH:C564565","OMIM:300211"],"synonyms":[{"name":"EMWX","type":"exact"},{"name":"episodic muscle weakness, X-linked","type":"exact"}],"termid":"MONDO:0010267","xrefs":{"Monarch":{"xref_id":"0010267"}}}


id: PBO:0027995
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_level_during_mitotic_G1_phase","termid":"PBO:0027995"}


id: PBO:0056168
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mucosal vascular addressin cell adhesion molecule 1","termid":"PBO:0056168"}


id: FYPO:0004132
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of sulfite reductase activity is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal catalytic activity","termid":"FYPO:0000660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000257","FYPO:0000654"],"is_obsolete":false,"name":"normal sulfite reductase activity","synonyms":[{"name":"normal sulphite reductase activity","type":"exact"}],"termid":"FYPO:0004132"}


id: GO:0030251
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and stops, prevents or reduces the activity of guanylate cyclase.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclase inhibitor activity","termid":"GO:0010852"},{"relation_name":"is_a","term_name":"guanylate cyclase regulator activity","termid":"GO:0030249"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0004857"},{"rel_name":"is_a","termid":"GO:0140678"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0140678","GO:0004857","GO:0098772","GO:0003674","GO:0030234"],"is_obsolete":false,"name":"guanylate cyclase inhibitor activity","termid":"GO:0030251"}


id: MONDO:0020247
data:
  {"annotated_genes":["SJAG_02362","SJAG_02194"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87232],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0015026"},{"annotations":[86927],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0957264"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"inherited vitreoretinopathy","termid":"MONDO:0020246"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02194":null,"SJAG_02362":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0002320"],"is_obsolete":false,"name":"congenital vitreoretinal dysplasia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:449866003","icd11.foundation:44221751","Orphanet:98669","ICD9:743.56","UMLS:C3266134","MEDGEN:757909"],"synonyms":[{"name":"vitreoretinal dysplasia","type":"exact"}],"termid":"MONDO:0020247","terms_by_termid":{"MONDO:0015026":null,"MONDO:0957264":null},"xrefs":{"Monarch":{"xref_id":"0020247"}}}


id: GO:1905314
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a semi-lunar valve over time, from its formation to the mature structure.","definition_xrefs":["GOC:TermGenie","GO_REF:0000094","GOC:rl","PMID:19409885","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heart valve development","termid":"GO:0003170"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"semi-lunar valve development","synonyms":[{"name":"semilunar valve development","type":"exact"},{"name":"semilunar valves development","type":"exact"}],"termid":"GO:1905314"}


id: PBO:0047509
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FERM domain containing kindlin 1","termid":"PBO:0047509"}


id: MONDO:0002601
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A non-seminomatous germ cell tumor characterized by the presence of various tissues which correspond to the different germinal layers (endoderm, mesoderm, and ectoderm). It occurs in the testis, ovary, and extragonadal sites including central nervous system, mediastinum, lung, and stomach. According to the level of differentiation of the tissues which comprise the tumor, teratomas are classified as mature or immature. Mature teratomas are composed of well differentiated, adult-type tissues. Immature teratomas are composed of immature, fetal-type tissues. Testicular teratomas in children follow a benign clinical course. Mature ovarian teratomas without a fetal-type component have an excellent outcome. The prognosis of immature ovarian teratomas is related to the grade and stage of the tumor.","definition_xrefs":["NCIT:C3403"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete germ cell and embryonal cancer (obsolete MONDO:0002510)","termid":"MONDO:0002510"},{"relation_name":"is_a","term_name":"nongerminomatous germ cell tumor","termid":"MONDO:0021656"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"teratoma","secondary_identifiers":["SCTID:36591000119102","MEDGEN:21097","ICDO:9080/1","ONCOTREE:TT","UMLS:C0039538","MESH:D013724","DOID:3307"],"synonyms":[{"name":"teratoma","type":"exact"}],"termid":"MONDO:0002601","xrefs":{"Monarch":{"xref_id":"0002601"}}}


id: MONDO:0006416
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A Burkitt lymphoma that arises from the small intestine.","definition_xrefs":["NCIT:C27409"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune system cancer","termid":"MONDO:0000621"},{"relation_name":"is_a","term_name":"small intestine lymphoma","termid":"MONDO:0001852"},{"relation_name":"is_a","term_name":"Burkitt lymphoma","termid":"MONDO:0007243"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992","MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"small intestinal Burkitt lymphoma","secondary_identifiers":["MEDGEN:277650","UMLS:C1335991"],"synonyms":[{"name":"Burkitt lymphoma of small intestine","type":"exact"},{"name":"Burkitts lymphoma of small intestine","type":"exact"},{"name":"primary small intestinal Burkitt's lymphoma","type":"exact"},{"name":"small intestinal Burkitt lymphoma","type":"exact"},{"name":"small intestinal Burkitt's lymphoma","type":"exact"},{"name":"small intestine Burkitt lymphoma","type":"exact"},{"name":"small intestine Burkitt's lymphoma","type":"exact"},{"name":"small intestine Burkitts lymphoma","type":"exact"}],"termid":"MONDO:0006416","xrefs":{"Monarch":{"xref_id":"0006416"}}}


id: PBO:0028393
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_mitotic_cell_cycle_regulation_during_cellular_response_to_osmotic_stress","termid":"PBO:0028393"}


id: GO:0060834
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The establishment, maintenance and elaboration of a line that delineates the mouth and the anus of an embryo.","definition_xrefs":["GOC:tb","GOC:sdb_2009","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic axis specification","termid":"GO:0000578"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"oral/aboral axis specification","synonyms":[{"name":"oral/aboral axis determination","type":"related"}],"termid":"GO:0060834"}


id: FYPO:0006342
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the binding of a protein to one or more microtubules occurs to a lower extent than normal. The affected protein may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein-protein interaction","termid":"FYPO:0001645"},{"relation_name":"is_a","term_name":"abnormal microtubule binding","termid":"FYPO:0001943"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000702"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000707","FYPO:0001985","FYPO:0000702"],"is_obsolete":false,"name":"decreased microtubule binding","synonyms":[{"name":"reduced microtubule binding","type":"exact"}],"termid":"FYPO:0006342"}


id: PBO:0088891
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TatD homolog","termid":"PBO:0088891"}


id: MONDO:0000613
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete estrogen-receptor positive breast cancer (obsolete MONDO:0000613)","termid":"MONDO:0000613","xrefs":{"Monarch":{"xref_id":"0000613"}}}


id: GO:0009338
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An enzyme complex that catalyzes exonucleolytic cleavage (in the presence of ATP) in either 5' to 3' or 3' to 5' direction to yield 5'-phosphooligonucleotides. Exodeoxyribonuclease V shows a preference for double-stranded DNA and possesses DNA-dependent ATPase activity. It acts endonucleolytically on single-stranded circular DNA.","definition_xrefs":["PMID:1618858"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"},{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"exodeoxyribonuclease V complex","termid":"GO:0009338"}


id: GO:1905672
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of lysosome organization.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:25561470"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of organelle organization","termid":"GO:0010639"},{"relation_name":"is_a","term_name":"regulation of lysosome organization","termid":"GO:1905671"},{"relation_name":"negatively_regulates","term_name":"lysosome organization","termid":"GO:0007040"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of lysosome organization","synonyms":[{"name":"down regulation of lysosome organisation","type":"exact"},{"name":"down regulation of lysosome organization","type":"exact"},{"name":"down regulation of lysosome organization and biogenesis","type":"related"},{"name":"down-regulation of lysosome organisation","type":"exact"},{"name":"down-regulation of lysosome organization","type":"exact"},{"name":"down-regulation of lysosome organization and biogenesis","type":"related"},{"name":"downregulation of lysosome organisation","type":"exact"},{"name":"downregulation of lysosome organization","type":"exact"},{"name":"downregulation of lysosome organization and biogenesis","type":"related"},{"name":"inhibition of lysosome organisation","type":"narrow"},{"name":"inhibition of lysosome organization","type":"narrow"},{"name":"inhibition of lysosome organization and biogenesis","type":"related"},{"name":"negative regulation of lysosome organisation","type":"exact"},{"name":"negative regulation of lysosome organization and biogenesis","type":"related"}],"termid":"GO:1905672"}


id: MONDO:0005401
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign or malignant neoplasm that affects the colon. Representative examples of benign neoplasms include lipoma and leiomyoma. Representative examples of malignant neoplasms include carcinoma, lymphoma, and sarcoma. Colonic adenomas always exhibit epithelial dysplasia and are considered premalignant neoplasms.","definition_xrefs":["NCIT:C2953"],"direct_ancestors":[{"relation_name":"is_a","term_name":"colonic disorder","termid":"MONDO:0003409"},{"relation_name":"is_a","term_name":"colorectal neoplasm","termid":"MONDO:0005335"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"colonic neoplasm","secondary_identifiers":["MEDGEN:3165","EFO:0004288","MESH:D003110","UMLS:C0009375"],"synonyms":[{"name":"colon neoplasm","type":"exact"},{"name":"colon neoplasm (disease)","type":"exact"},{"name":"colon tumor","type":"exact"},{"name":"colon tumour","type":"exact"},{"name":"colonic neoplasm","type":"exact"},{"name":"colonic tumor","type":"exact"},{"name":"colonic tumour","type":"exact"},{"name":"neoplasm of colon","type":"exact"},{"name":"neoplasm of the colon","type":"exact"},{"name":"tumor of colon","type":"exact"},{"name":"tumor of the colon","type":"exact"},{"name":"tumour of colon","type":"exact"},{"name":"tumour of the colon","type":"exact"}],"termid":"MONDO:0005401","xrefs":{"Monarch":{"xref_id":"0005401"}}}


id: PBO:0036292
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uridine ribohydrolase Urh2 (predicted)","termid":"PBO:0036292"}


id: GO:0007179
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by an extracellular ligand binding to a transforming growth factor beta receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:signaling","GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transforming growth factor beta receptor superfamily signaling pathway","termid":"GO:0141091"},{"relation_name":"part_of","term_name":"cellular response to transforming growth factor beta stimulus","termid":"GO:0071560"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"transforming growth factor beta receptor signaling pathway","secondary_identifiers":["Reactome:R-HSA-170834"],"synonyms":[{"name":"TGF-beta receptor signaling pathway","type":"exact"},{"name":"TGF-beta receptor signalling pathway","type":"exact"},{"name":"TGFbeta receptor signaling pathway","type":"exact"},{"name":"TGFbeta receptor signalling pathway","type":"exact"},{"name":"transforming growth factor beta receptor signalling pathway","type":"exact"}],"termid":"GO:0007179"}


id: MOD:00081
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-glutamic acid residue to L-glutamate 5-methyl ester.","definition_xrefs":["RESID:AA0072#GLU","DeltaMass:167","OMSSA:70","PubMed:6300110","Unimod:34#E","OMSSA:17","PubMed:16888"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-glutamic acid 5-methyl ester","termid":"MOD:01453"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"L-glutamic acid 5-methyl ester (Glu)","synonyms":[{"name":"(2S)-2-amino-5-methoxy-5-oxopentanoic acid","type":"exact"},{"name":"(5)-methyl L-hydrogen glutamate","type":"exact"},{"name":"2-aminopentanedioic acid 5-methyl ester","type":"exact"},{"name":"5-methyl L-2-aminoglutarate","type":"exact"},{"name":"5-methyl L-glutamate","type":"exact"},{"name":"5-methyl esterified L-glutamic acid","type":"exact"},{"name":"L-glutamic acid 5-methyl ester","type":"exact"},{"name":"MOD_RES Glutamate methyl ester (Glu)","type":"exact"},{"name":"Methyl","type":"related"},{"name":"Methylation","type":"related"},{"name":"O-methyl Glutamyl","type":"exact"},{"name":"O5MeGlu","type":"exact"},{"name":"glutamic acid 5-methyl ester","type":"exact"},{"name":"glutamic acid gamma-methyl ester","type":"exact"},{"name":"meestere","type":"exact"},{"name":"methyl ester","type":"related"},{"name":"methyle","type":"exact"}],"termid":"MOD:00081"}


id: GO:1902401
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any detection of stimulus that is involved in mitotic DNA damage checkpoint.","definition_xrefs":["GOC:TermGenie","GOC:mtg_cell_cycle"],"gene_count":0,"genotype_count":0,"name":"obsolete detection of stimulus involved in mitotic DNA damage checkpoint (obsolete GO:1902401)","synonyms":[{"name":"perception of stimulus involved in mitotic DNA damage checkpoint","type":"related"},{"name":"stimulus detection involved in mitotic DNA damage checkpoint","type":"exact"},{"name":"stimulus sensing involved in mitotic DNA damage checkpoint","type":"related"}],"termid":"GO:1902401"}


id: PBO:0005536
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNARE binding protein Sec1 (predicted)","termid":"PBO:0005536"}


id: GO:0046671
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of programmed cell death that occurs in the retina.","definition_xrefs":["GOC:ai","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of programmed cell death","termid":"GO:0043069"},{"relation_name":"is_a","term_name":"regulation of retinal cell programmed cell death","termid":"GO:0046668"},{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"negatively_regulates","term_name":"retinal cell programmed cell death","termid":"GO:0046666"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of retinal cell programmed cell death","synonyms":[{"name":"down regulation of retinal programmed cell death","type":"exact"},{"name":"down-regulation of retinal programmed cell death","type":"exact"},{"name":"downregulation of retinal programmed cell death","type":"exact"},{"name":"inhibition of retinal programmed cell death","type":"narrow"},{"name":"negative regulation of retinal programmed cell death","type":"exact"}],"termid":"GO:0046671"}


id: GO:0050377
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-D-glucose = H2O + UDP-4-dehydro-6-deoxy-D-glucose.","definition_xrefs":["EC:4.2.1.76","RHEA:21500"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"UDP-glucose 4,6-dehydratase activity","secondary_identifiers":["MetaCyc:UDP-GLUCOSE-46-DEHYDRATASE-RXN","KEGG_REACTION:R00293"],"synonyms":[{"name":"UDP-D-glucose oxidoreductase activity","type":"related"},{"name":"UDP-D-glucose-4,6-hydrolyase activity","type":"related"},{"name":"UDP-glucose 4,6-hydro-lyase (UDP-4-dehydro-6-deoxy-D-glucose-forming)","type":"related"},{"name":"UDP-glucose 4,6-hydro-lyase activity","type":"related"},{"name":"UDPglucose 4,6-dehydratase activity","type":"related"},{"name":"UDPglucose 4,6-hydro-lyase activity","type":"related"}],"termid":"GO:0050377"}


id: FYPO:0000688
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase activity","termid":"FYPO:0000687"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000707","FYPO:0001985","FYPO:0000654","FYPO:0000661"],"is_obsolete":false,"name":"decreased peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase activity","synonyms":[{"name":"reduced peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine amidase activity","type":"exact"}],"termid":"FYPO:0000688"}


id: PBO:0067183
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 241, pseudogene","termid":"PBO:0067183"}


id: PR:O42871
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- png1 gene.","definition_xrefs":["UniProtKB:O42871","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromatin modification-related protein png1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3G9.08","synonyms":[{"name":"ING1 homolog 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-png1","type":"exact"}],"termid":"PR:O42871"}


id: PBO:0029930
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_5-phosphoribose_1-diphosphate_binding","termid":"PBO:0029930"}


id: GO:0098846
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cell projection of a podocyte (glomerular visceral epithelial cell) forming a foot-like structure projecting from a podocyte primary projection, that wraps around capillaries of a renal glomerulus. Adjacent feet (pedicels) interdigitate, leaving thin filtration slits between them, which are covered by slit diaphragms.","definition_xrefs":["PMID:25324828"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane bounded cell projection","termid":"GO:0120025"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"podocyte foot","secondary_identifiers":["Wikipedia:Podocyte"],"synonyms":[{"name":"pedicel","type":"exact"},{"name":"podocyte foot process","type":"exact"},{"name":"secondary podocyte projection","type":"exact"}],"termid":"GO:0098846"}


id: PBO:0109454
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LHX8 antisense RNA 1","termid":"PBO:0109454"}


id: PBO:0042029
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 86","termid":"PBO:0042029"}


id: PBO:0113738
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BRCA1 associated deubiquitinase 1","termid":"PBO:0113738"}


id: PBO:0051315
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 1/OR2-108 (non-functional)","termid":"PBO:0051315"}


id: MONDO:0016287
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete adenoid basal carcinoma of the cervix uteri (obsolete MONDO:0016287)","termid":"MONDO:0016287","xrefs":{"Monarch":{"xref_id":"0016287"}}}


id: GO:0002298
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an antigenically naive CD4-positive, alpha-beta T cell acquires the specialized features of a CD4-positive, CD25-positive, alpha-beta regulatory T cell as part of an immune response.","definition_xrefs":["PMID:12093005","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CD4-positive, alpha-beta T cell differentiation involved in immune response","termid":"GO:0002294"},{"relation_name":"is_a","term_name":"CD4-positive, CD25-positive, alpha-beta regulatory T cell differentiation","termid":"GO:0002361"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"CD4-positive, CD25-positive, alpha-beta regulatory T cell differentiation involved in immune response","synonyms":[{"name":"CD4-positive, CD25-positive, alpha-beta T cell development involved in immune response","type":"related"},{"name":"CD4-positive, CD25-positive, alpha-beta regulatory T cell differentiation during immune response","type":"related"},{"name":"CD4-positive, CD25-positive, alpha-beta regulatory T lymphocyte differentiation during immune response","type":"related"},{"name":"CD4-positive, CD25-positive, alpha-beta regulatory T-cell differentiation during immune response","type":"related"},{"name":"CD4-positive, CD25-positive, alpha-beta regulatory T-lymphocyte differentiation during immune response","type":"related"}],"termid":"GO:0002298"}


id: PR:Q65ZA6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ctf8 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q65ZA6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome transmission fidelity protein 8 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC19D5.11c","synonyms":[{"name":"Spom972h-ctf8","type":"exact"}],"termid":"PR:Q65ZA6"}


id: GO:0000450
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Endonucleolytic cleavage of pre-rRNAs originally produced as a bicistronic rRNA transcript that contains the SSU-rRNA and the LSU-rRNA in that order from 5' to 3' along the primary transcript. Primary ribosomal RNA transcripts with two genes in this order are produced in Archaeal species.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA processing","termid":"GO:0006364"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0042254"}],"interesting_parent_ids":["GO:0044085","GO:0010467","GO:0042254","GO:0008150"],"is_obsolete":false,"name":"cleavage of bicistronic rRNA transcript (SSU-rRNA, LSU-rRNA)","termid":"GO:0000450"}


id: PBO:0055982
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LRRN4 C-terminal like","termid":"PBO:0055982"}


id: MONDO:0010411
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited hypertrophic pyloric stenosis","termid":"MONDO:0100239"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"pyloric stenosis, infantile hypertrophic, 4","secondary_identifiers":["OMIM:300711","MESH:C567472","MEDGEN:395521","UMLS:C2678037"],"synonyms":[{"name":"IHPS4","type":"exact"},{"name":"pyloric stenosis, infantile hypertrophic, 4","type":"exact"}],"termid":"MONDO:0010411","xrefs":{"Monarch":{"xref_id":"0010411"}}}


id: GO:0007268
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The vesicular release of classical neurotransmitter molecules from a presynapse, across a chemical synapse, the subsequent activation of neurotransmitter receptors at the postsynapse of a target cell (neuron, muscle, or secretory cell) and the effects of this activation on the postsynaptic membrane potential and ionic composition of the postsynaptic cytosol. This process encompasses both spontaneous and evoked release of neurotransmitter and all parts of synaptic vesicle exocytosis. Evoked transmission starts with the arrival of an action potential at the presynapse.","definition_xrefs":["GOC:jl","MeSH:D009435"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anterograde trans-synaptic signaling","termid":"GO:0098916"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"chemical synaptic transmission","secondary_identifiers":["Wikipedia:Neurotransmission","Reactome:R-HSA-442720","Reactome:R-HSA-442729","Reactome:R-HSA-112316","Reactome:R-HSA-451307","Reactome:R-HSA-442742","Reactome:R-HSA-9619229","Reactome:R-HSA-9619483","Reactome:R-HSA-9620244","Reactome:R-HSA-451308"],"synonyms":[{"name":"neurotransmission","type":"related"},{"name":"signal transmission across a synapse","type":"broad"},{"name":"synaptic transmission","type":"broad"}],"termid":"GO:0007268"}


id: PBO:0065533
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre T cell antigen receptor alpha","termid":"PBO:0065533"}


id: PBO:0078576
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 52","termid":"PBO:0078576"}


id: PBO:0039611
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ANTXR like pseudogene 1","termid":"PBO:0039611"}


id: PBO:0031792
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_duration_of_cell_cycle_phase","termid":"PBO:0031792"}


id: MONDO:0020838
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infection of the anterior nasal structures by Corynebacterium diphtheriae.","definition_xrefs":["NCIT:C34542"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diphtheria","termid":"MONDO:0005504"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anterior nasal diphtheria","secondary_identifiers":["MEDGEN:41598","ICD9:032.2","SCTID:15682004","UMLS:C0012553"],"synonyms":[{"name":"Anterior Nasal Diphtheria","type":"related"},{"name":"Anterior nasal diphtheria","type":"related"},{"name":"anterior nasal diphtheria","type":"exact"}],"termid":"MONDO:0020838","xrefs":{"Monarch":{"xref_id":"0020838"}}}


id: PBO:0080518
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WASP family member 4, pseudogene","termid":"PBO:0080518"}


id: SO:0000640
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Non-coding regions of DNA that precede the sequence that codes for the ribosomal RNA.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcribed_spacer_region","termid":"SO:0000638"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"external_transcribed_spacer_region","synonyms":[{"name":"external transcribed spacer region","type":"exact"}],"termid":"SO:0000640"}


id: PBO:0000732
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.2.1.16","termid":"PBO:0000732"}


id: GO:0100040
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any transcription from RNA polymerase II promoter process that negatively regulates invasive growth in response to glucose limitation.","definition_xrefs":["GOC:cjm","GOC:obol"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of invasive growth in response to glucose limitation by transcription from RNA polymerase II promoter (obsolete GO:0100040)","termid":"GO:0100040"}


id: PBO:0077578
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane and immunoglobulin domain containing 3","termid":"PBO:0077578"}


id: PR:000050476
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein kinase wis1 (Schizosaccharomyces pombe) that has not been phosphorylated on residues equivalent to Ser-469 and Thr-473 of the amino acid sequence represented by UniProtKB:P33886. Example: UniProtKB:P33886, Ser-469/Thr-473, PR:000026291.","definition_xrefs":["PomBase:VW","PMID:12181336","PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein kinase wis1 (Schizosaccharomyces pombe)","termid":"PR:000050474"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"wis1/UnPhos:(S469,T473)","pombase_gene_id":"SPBC409.07c","synonyms":[{"name":"PomBase_original_PRO_term_name: protein kinase wis1 unphosphorylated 1 (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-wis1/UnPhos:1","type":"exact"},{"name":"UniProtKB:P33886, Ser-469/Thr-473, PR:000026291","type":"narrow"},{"name":"wis1/UnPhos:(S469,T473)","type":"exact"}],"termid":"PR:000050476"}


id: PBO:0057987
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3913-1","termid":"PBO:0057987"}


id: GO:0062044
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops or decreases the rate, frequency or extent of cardiac epithelial to mesenchymal transition, a transition where a cardiac epithelial cell loses apical/basolateral polarity, severs intercellular adhesive junctions, degrades basement membrane components and becomes a migratory mesenchymal cell.","definition_xrefs":["GOC:BFH","PMID:20951801","GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of epithelial to mesenchymal transition","termid":"GO:0010719"},{"relation_name":"is_a","term_name":"regulation of cardiac epithelial to mesenchymal transition","termid":"GO:0062042"},{"relation_name":"negatively_regulates","term_name":"cardiac epithelial to mesenchymal transition","termid":"GO:0060317"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cardiac epithelial to mesenchymal transition","termid":"GO:0062044"}


id: GO:1904150
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of microglial cell mediated cytotoxicity.","definition_xrefs":["GOC:nc","GOC:TermGenie","PMID:19100238","GOC:BHF","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of leukocyte mediated cytotoxicity","termid":"GO:0001911"},{"relation_name":"is_a","term_name":"negative regulation of myeloid leukocyte mediated immunity","termid":"GO:0002887"},{"relation_name":"is_a","term_name":"regulation of microglial cell mediated cytotoxicity","termid":"GO:1904149"},{"relation_name":"negatively_regulates","term_name":"microglial cell mediated cytotoxicity","termid":"GO:0090634"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of microglial cell mediated cytotoxicity","synonyms":[{"name":"down regulation of microglial cell mediated cytotoxicity","type":"exact"},{"name":"down-regulation of microglial cell mediated cytotoxicity","type":"exact"},{"name":"downregulation of microglial cell mediated cytotoxicity","type":"exact"},{"name":"inhibition of microglial cell mediated cytotoxicity","type":"narrow"}],"termid":"GO:1904150"}


id: MONDO:0019839
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"primary hypophysitis","termid":"MONDO:0019835"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"panhypophysitis","secondary_identifiers":["UMLS:C5190786","GARD:19285","MEDGEN:1674527","Orphanet:95513"],"synonyms":[{"name":"Infundibulo-panhypophysitis","type":"exact"}],"termid":"MONDO:0019839","xrefs":{"Monarch":{"xref_id":"0019839"}}}


id: GO:0060480
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a lung goblet cell. A goblet cell is a cell of the epithelial lining that produces and secretes mucins.","definition_xrefs":["GOC:dph","GOC:mtg_lung"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lung secretory cell differentiation","termid":"GO:0061140"},{"relation_name":"part_of","term_name":"lobar bronchus epithelium development","termid":"GO:0060481"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lung goblet cell differentiation","synonyms":[{"name":"pulmonary goblet cell differentiation","type":"exact"}],"termid":"GO:0060480"}


id: PBO:0068960
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 204, pseudogene","termid":"PBO:0068960"}


id: PBO:0000050
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally repressed by Chp1","termid":"PBO:0000050"}


id: PBO:0052752
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 18 pseudogene 44","termid":"PBO:0052752"}


id: GO:2001141
data:
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