# terms

id: GO:0042133
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving neurotransmitters, any of a group of substances that are released on excitation from the axon terminal of a presynaptic neuron of the central or peripheral nervous system and travel across the synaptic cleft to either excite or inhibit the target cell.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete neurotransmitter metabolic process (obsolete GO:0042133)","synonyms":[{"name":"neurotransmitter metabolism","type":"exact"}],"termid":"GO:0042133"}


id: GO:0140292
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (ADP-D-ribosyl)-L-seryl-[protein] + H2O = L-seryl-[protein] + ADP-ribose.","definition_xrefs":["PMID:29234005","RHEA:58256","PMID:28650317"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing N-glycosyl compounds","termid":"GO:0016799"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0016798","GO:0003824","GO:0140096"],"is_obsolete":false,"name":"ADP-ribosylserine hydrolase activity","termid":"GO:0140292"}


id: GO:0043280
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the activity of a cysteine-type endopeptidase involved in the apoptotic process.","definition_xrefs":["GOC:jl","GOC:mtg_apoptosis"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of cysteine-type endopeptidase activity involved in apoptotic process (obsolete GO:0043280)","synonyms":[{"name":"activation of caspase activity","type":"narrow"},{"name":"positive regulation of caspase activity","type":"broad"},{"name":"stimulation of caspase activity","type":"narrow"},{"name":"up regulation of caspase activity","type":"exact"},{"name":"up-regulation of caspase activity","type":"exact"},{"name":"upregulation of caspase activity","type":"exact"}],"termid":"GO:0043280"}


id: PR:Q9C0Y8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAPB24D3.06c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9C0Y8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0613 protein PB24D3.06c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPB24D3.06c","synonyms":[{"name":"Spom972h-SPAPB24D3.06c","type":"exact"}],"termid":"PR:Q9C0Y8"}


id: MONDO:0015495
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete otomandibular dysplasia associated with monogenic syndromes (obsolete MONDO:0015495)","secondary_identifiers":["Orphanet:156202"],"termid":"MONDO:0015495","xrefs":{"Monarch":{"xref_id":"0015495"}}}


id: PBO:0116751
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SWI/SNF related BAF chromatin remodeling complex subunit D1","termid":"PBO:0116751"}


id: PBO:0053776
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1022","termid":"PBO:0053776"}


id: PBO:0079418
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin beta pseudogene 1","termid":"PBO:0079418"}


id: MOD:01365
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative -","definition_xrefs":["Unimod:478#C"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fluorescein-5-thiosemicarbazide","termid":"MOD:00626"},{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"fluorescein-5-thiosemicarbazide - site C","synonyms":[{"name":"FTC","type":"related"},{"name":"fluorescein-5-thiosemicarbazide","type":"related"}],"termid":"MOD:01365"}


id: PBO:0013110
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"forkhead transcription factor Fkh2","termid":"PBO:0013110"}


id: GO:0048310
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The partitioning of nuclei between daughter cells at cell division.","definition_xrefs":["GOC:jid"],"gene_count":0,"genotype_count":0,"name":"obsolete nucleus inheritance (obsolete GO:0048310)","synonyms":[{"name":"cell nucleus inheritance","type":"exact"}],"termid":"GO:0048310"}


id: PBO:0068343
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 114","termid":"PBO:0068343"}


id: MONDO:0002742
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A usually well to moderately differentiated cervical adenocarcinoma characterized by the presence of malignant glandular cells that contain significant amount of intracytoplasmic mucin.","definition_xrefs":["NCIT:C36095"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mucinous adenocarcinoma","termid":"MONDO:0004957"},{"relation_name":"is_a","term_name":"cervical adenocarcinoma","termid":"MONDO:0005153"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"cervical mucinous adenocarcinoma","secondary_identifiers":["MEDGEN:232048","DOID:3701","UMLS:C1332919"],"synonyms":[{"name":"cervical mucinous adenocarcinoma","type":"exact"},{"name":"uterine cervix mucinous adenocarcinoma","type":"exact"}],"termid":"MONDO:0002742","xrefs":{"Monarch":{"xref_id":"0002742"}}}


id: MONDO:0001892
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A non-Hodgkin or Hodgkin lymphoma that arises in the spinal cord as a primary lesion.","definition_xrefs":["NCIT:C5157"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary central nervous system lymphoma","termid":"MONDO:0002571"},{"relation_name":"is_a","term_name":"spinal cord cancer","termid":"MONDO:0003544"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"spinal cord lymphoma","secondary_identifiers":["UMLS:C1336044","DOID:14150","MEDGEN:236836"],"synonyms":[{"name":"lymphoma of spinal cord","type":"exact"},{"name":"lymphoma of the spinal cord","type":"exact"},{"name":"primary spinal cord lymphoma","type":"exact"},{"name":"spinal cord cancer","type":"related"},{"name":"spinal cord lymphoma","type":"exact"}],"termid":"MONDO:0001892","xrefs":{"Monarch":{"xref_id":"0001892"}}}


id: MONDO:1010529
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cleft palate that occurs in pig.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cleft palate, non-human animal","termid":"MONDO:1010037"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cleft palate, pig","secondary_identifiers":["OMIA:000197-9823"],"termid":"MONDO:1010529","xrefs":{"Monarch":{"xref_id":"1010529"}}}


id: GO:0051679
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving 6-alpha-maltosylglucose, also known as isopanose.","definition_xrefs":["LIGAND:C03367","PubChem_Compound:439991","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligosaccharide metabolic process","termid":"GO:0009311"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"6-alpha-maltosylglucose metabolic process","synonyms":[{"name":"6-alpha-maltosylglucose metabolism","type":"exact"},{"name":"isopanose metabolic process","type":"exact"},{"name":"isopanose metabolism","type":"exact"}],"termid":"GO:0051679"}


id: PBO:0003206
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rheb GTPase Rhb1","termid":"PBO:0003206"}


id: MONDO:0014083
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal agammaglobulinemia in which the cause of the disease is a mutation in the PIK3R1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal agammaglobulinemia","termid":"MONDO:0011096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"agammaglobulinemia 7, autosomal recessive","secondary_identifiers":["OMIM:615214","MEDGEN:767603","UMLS:C3554689","GARD:15918","DOID:0081139"],"synonyms":[{"name":"AGM7","type":"related"},{"name":"PIK3R1 autosomal agammaglobulinemia","type":"exact"},{"name":"agammaglobulinemia 7, autosomal recessive","type":"exact"},{"name":"agammaglobulinemia, autosomal recessive, due to PIK3R1 defect","type":"related"},{"name":"autosomal agammaglobulinemia caused by mutation in PIK3R1","type":"exact"}],"termid":"MONDO:0014083","xrefs":{"Monarch":{"xref_id":"0014083"}}}


id: PBO:0074729
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 87","termid":"PBO:0074729"}


id: MONDO:0005878
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Onchocerciasis affecting the eye.","definition_xrefs":["NCIT:C34862"],"direct_ancestors":[{"relation_name":"is_a","term_name":"onchocerciasis","termid":"MONDO:0017137"},{"relation_name":"is_a","term_name":"parasitic eye infection","termid":"MONDO:0020947"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"ocular onchocerciasis","secondary_identifiers":["EFO:0007398","MEDGEN:45196","UMLS:C0029002","SCTID:240842000","MESH:D015827"],"synonyms":[{"name":"eyeball of camera-type eye onchocerciasis","type":"exact"},{"name":"onchocerciasis of eyeball of camera-type eye","type":"exact"}],"termid":"MONDO:0005878","xrefs":{"Monarch":{"xref_id":"0005878"}}}


id: MONDO:0003817
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete peritoneal serous papillary adenocarcinoma (obsolete MONDO:0003817)","termid":"MONDO:0003817","xrefs":{"Monarch":{"xref_id":"0003817"}}}


id: MONDO:0001363
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"eye degenerative disorder","termid":"MONDO:0004884"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"blind hypertensive eye","secondary_identifiers":["MEDGEN:509660","UMLS:C0154789","ICD9:360.42","DOID:11776","SCTID:264008"],"termid":"MONDO:0001363","xrefs":{"Monarch":{"xref_id":"0001363"}}}


id: FYPO:0003859
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to wortmannin. Cells stop growing (and may die) at a concentration of wortmannin that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002683"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000139","FYPO:0002683","FYPO:0001985","FYPO:0000003"],"is_obsolete":false,"name":"sensitive to wortmannin","synonyms":[{"name":"hypersensitive to wortmannin","type":"exact"},{"name":"sensitive to wortmannin during mitotic cell cycle","type":"related"},{"name":"sensitive to wortmannin during vegetative growth","type":"exact"}],"termid":"FYPO:0003859"}


id: GO:0102156
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2,5-dihydroxybenzoate + UDP-alpha-D-glucose = 2,5-dihydroxybenzoate 5-O-beta-D-glucoside + UDP + H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 2,5-DHBA UDP-glucosyltransferase activity (obsolete GO:0102156)","termid":"GO:0102156"}


id: SO:0001185
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute describing the sequence of a transcript that has catalytic activity with or without an associated ribonucleoprotein.","definition_xrefs":["RSC:cb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"feature_attribute","termid":"SO:0000733"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"enzymatic","termid":"SO:0001185"}


id: PR:Q9UTT2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A splicing factor 3B subunit 3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01673","PANTHER:PTHR10644:SF1","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-mRNA-splicing factor prp12 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPJ698.03c","secondary_identifiers":["UniProtKB:Q9UTT2"],"synonyms":[{"name":"Spom972h-SF3B3","type":"exact"},{"name":"pre-mRNA-processing protein 12 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"spliceosome-associated protein 130 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UTT2"}


id: PBO:0071304
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L26 pseudogene 27","termid":"PBO:0071304"}


id: PBO:0056926
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myo-inositol oxygenase pseudogene 1","termid":"PBO:0056926"}


id: MONDO:0015386
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Epignathus is a very rare and life threatening intraoral teratoma, usually arising from the maxilla, mandible, palate or base of skull and invading the cranium, nasopharynx or oral cavity. Epignathus is more commonly seen in females, and presents with various manifestations (depending on the tumor size) including obstructive polyhydramnios in the prenatal period and dyspnea, cyanosis, cough, difficulty in sucking and swallowing, and rarely vomiting (due to swallowing difficulties) postnatally. When large, they can lead to airway obstruction, asphyxia and death in the neonatal period.","definition_xrefs":["Orphanet:141077"],"direct_ancestors":[{"relation_name":"is_a","term_name":"head and neck neoplasm","termid":"MONDO:0005586"},{"relation_name":"is_a","term_name":"extragonadal teratoma","termid":"MONDO:0019500"},{"relation_name":"is_a","term_name":"otorhinolaryngologic disease","termid":"MONDO:0024623"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epignathus","secondary_identifiers":["UMLS:C0266725","GARD:19943","icd11.foundation:7319064","HP:0030767","MEDGEN:540117","SCTID:31248004"],"synonyms":[{"name":"Epignathus","type":"exact"},{"name":"epignathus (disease)","type":"exact"},{"name":"oropharyngeal teratoma","type":"exact"}],"termid":"MONDO:0015386","xrefs":{"Monarch":{"xref_id":"0015386"}}}


id: GO:0070653
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a high-density lipoprotein receptor.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipoprotein particle receptor binding","termid":"GO:0070325"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"high-density lipoprotein particle receptor binding","synonyms":[{"name":"HDL receptor binding","type":"exact"},{"name":"high-density lipoprotein receptor binding","type":"exact"}],"termid":"GO:0070653"}


id: GO:0070075
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of the aqueous layer of the tear film from the lacrimal glands. Tears are the liquid product of a process of lacrimation to clean and lubricate the eyes. Tear fluid contains water, mucin, lipids, lysozyme, lactoferrin, lipocalin, lacritin, immunoglobulins, glucose, urea, sodium, and potassium.","definition_xrefs":["GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"body fluid secretion","termid":"GO:0007589"},{"relation_name":"is_a","term_name":"secretion by tissue","termid":"GO:0032941"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"tear secretion","termid":"GO:0070075"}


id: PBO:0076819
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"terminal nucleotidyltransferase 2","termid":"PBO:0076819"}


id: GO:0045806
data:
  {"annotated_genes":["SJAG_03581"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94943],"is_not":false,"summary":null,"term":"GO:0045806"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of endocytosis.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of endocytosis","termid":"GO:0030100"},{"relation_name":"is_a","term_name":"negative regulation of transport","termid":"GO:0051051"},{"relation_name":"is_a","term_name":"negative regulation of cellular component organization","termid":"GO:0051129"},{"relation_name":"negatively_regulates","term_name":"endocytosis","termid":"GO:0006897"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03581":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0016192"],"is_obsolete":false,"name":"negative regulation of endocytosis","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of endocytosis","type":"exact"},{"name":"down-regulation of endocytosis","type":"exact"},{"name":"downregulation of endocytosis","type":"exact"},{"name":"inhibition of endocytosis","type":"narrow"}],"termid":"GO:0045806","terms_by_termid":{"GO:0045806":null}}


id: PBO:0084332
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Kinesin-like myosin passenger-protein; interacts with Myo2p and enhances its interaction with Sec4p during transport of secretory vesicles; controls actin cable structure and dynamics","termid":"PBO:0084332"}


id: PBO:0078741
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA methyltransferase 2 homolog B","termid":"PBO:0078741"}


id: PBO:0083109
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA ligase required for nonhomologous end-joining (NHEJ); forms stable heterodimer with required cofactor Lif1p, interacts with Nej1p; involved in meiosis, not essential for vegetative growth; mutations in human ortholog lead to ligase IV syndrome and Dubowitz syndrome","termid":"PBO:0083109"}


id: PBO:0049058
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 63","termid":"PBO:0049058"}


id: GO:0043385
data:
  {"annotated_genes":["SJAG_01869"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[92176],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043387"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving a mycotoxin, any poisonous substance produced by a fungus.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"toxin metabolic process","termid":"GO:0009404"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01869":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"mycotoxin metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"mycotoxin metabolism","type":"exact"}],"termid":"GO:0043385","terms_by_termid":{"GO:0043387":null}}


id: PBO:0053503
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 486","termid":"PBO:0053503"}


id: PBO:0080523
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WASP family homolog 5, pseudogene","termid":"PBO:0080523"}


id: PBO:0039327
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arachidonate 15-lipoxygenase type B","termid":"PBO:0039327"}


id: GO:0044049
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. An interaction with the host organism mediated by a substance secreted by the other (symbiont) organism via a type VI secretion system. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["MITRE:tk"],"gene_count":0,"genotype_count":0,"name":"obsolete interaction with host via protein secreted by type VI secretion system (obsolete GO:0044049)","termid":"GO:0044049"}


id: PBO:0004291
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibrillarin","termid":"PBO:0004291"}


id: PR:Q9USP4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug1 gene.","definition_xrefs":["UniProtKB:Q9USP4","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 1 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC11E10.03","synonyms":[{"name":"Spom972h-mug1","type":"exact"}],"termid":"PR:Q9USP4"}


id: PBO:0000411
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prefoldin subunit 4 (predicted)","termid":"PBO:0000411"}


id: MONDO:0020285
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete transposition of the great arteries and conotruncal cardiac anomaly (obsolete MONDO:0020285)","secondary_identifiers":["Orphanet:98717"],"termid":"MONDO:0020285","xrefs":{"Monarch":{"xref_id":"0020285"}}}


id: PBO:0031143
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-chromosome_loss_during_mitotic_chromosome_segregation","termid":"PBO:0031143"}


id: PBO:0081251
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF22 antisense RNA 1","termid":"PBO:0081251"}


id: PBO:0050163
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 3 pseudogene 19","termid":"PBO:0050163"}


id: GO:0042148
data:
  {"annotated_genes":["SJAG_01708","SJAG_03751","SJAG_03221","SJAG_02708","SJAG_01410","SJAG_02267","SJAG_00757","SJAG_04950"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72652,97272],"is_not":false,"summary":null,"term":"GO:0042148"},{"annotations":[108036,99418,110686],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000708"},{"annotations":[79271,100915,88843],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010774"}]},"cv_name":"biological_process","definition":"The process in which the nucleoprotein complex (composed of the broken single-strand DNA and the recombinase) searches and identifies a region of homology in intact duplex DNA. The broken single-strand DNA displaces the like strand and forms Watson-Crick base pairs with its complement, forming a duplex in which each strand is from one of the two recombining DNA molecules.","definition_xrefs":["GOC:elh","PMID:10357855"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA metabolic process","termid":"GO:0006259"},{"relation_name":"part_of","term_name":"DNA recombination","termid":"GO:0006310"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00757":null,"SJAG_01410":null,"SJAG_01708":null,"SJAG_02267":null,"SJAG_02708":null,"SJAG_03221":null,"SJAG_03751":null,"SJAG_04950":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006310"}],"interesting_parent_ids":["GO:0006310","GO:0008150","GO:0006259"],"is_obsolete":false,"name":"DNA strand invasion","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"D-loop biosynthesis","type":"related"},{"name":"D-loop formation","type":"related"},{"name":"Rad51-mediated strand invasion","type":"exact"},{"name":"displacement loop biosynthesis","type":"related"},{"name":"displacement loop formation","type":"related"},{"name":"strand invasion","type":"exact"}],"termid":"GO:0042148","terms_by_termid":{"GO:0000708":null,"GO:0010774":null,"GO:0042148":null}}


id: PBO:0029658
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_deadenylation-independent_decapping_of_nuclear-transcribed_mRNA","termid":"PBO:0029658"}


id: MONDO:0009474
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isovaleric acid, inability to smell","secondary_identifiers":["MEDGEN:383751","OMIM:243450","UMLS:C1855714"],"synonyms":[{"name":"isovaleric acid, inability to smell","type":"exact"}],"termid":"MONDO:0009474","xrefs":{"Monarch":{"xref_id":"0009474"}}}


id: GO:0015820
data:
  {"annotated_genes":["SJAG_03591","SJAG_03970","SJAG_00991","SJAG_05346"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88448],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1905533"},{"annotations":[99238,93696,92106],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1905534"}]},"cv_name":"biological_process","definition":"The directed movement of L-leucine, 2-amino-4-methylpentanoic acid, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cation transport","termid":"GO:0015695"},{"relation_name":"is_a","term_name":"branched-chain amino acid transport","termid":"GO:0015803"},{"relation_name":"is_a","term_name":"neutral amino acid transport","termid":"GO:0015804"},{"relation_name":"is_a","term_name":"L-amino acid transport","termid":"GO:0015807"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00991":null,"SJAG_03591":null,"SJAG_03970":null,"SJAG_05346":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"L-leucine transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"leucine transport","type":"broad"}],"termid":"GO:0015820","terms_by_termid":{"GO:1905533":null,"GO:1905534":null}}


id: PBO:0004421
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin-dependent protein kinase/CDK-activating kinase Mcs6","termid":"PBO:0004421"}


id: GO:0008513
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of organic cations from one side of a membrane to the other, up the solute's concentration gradient. The transporter binds the solute and undergoes a series of conformational changes. Transport works equally well in either direction.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cation transmembrane transporter activity","termid":"GO:0015101"},{"relation_name":"is_a","term_name":"secondary active transmembrane transporter activity","termid":"GO:0015291"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"secondary active organic cation transmembrane transporter activity","secondary_identifiers":["Reactome:R-HSA-549241","GO:0015354"],"synonyms":[{"name":"organic cation porter activity","type":"related"},{"name":"polyspecific organic cation transmembrane transporter activity","type":"narrow"}],"termid":"GO:0008513"}


id: GO:0006574
data:
  {"annotated_genes":["SJAG_00944"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[73468],"is_not":false,"summary":null,"term":"GO:0006574"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of L-valine, 2-amino-3-methylbutanoic acid.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"valine metabolic process","termid":"GO:0006573"},{"relation_name":"is_a","term_name":"pyruvate family amino acid catabolic process","termid":"GO:0009080"},{"relation_name":"is_a","term_name":"branched-chain amino acid catabolic process","termid":"GO:0009083"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00944":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006520"],"is_obsolete":false,"name":"L-valine catabolic process","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"valine breakdown","type":"exact"},{"name":"valine catabolism","type":"exact"},{"name":"valine degradation","type":"exact"}],"termid":"GO:0006574","terms_by_termid":{"GO:0006574":null}}


id: PR:O94325
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A peroxisomal targeting signal 1 receptor that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR10130:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxisomal targeting signal receptor (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC725.07","secondary_identifiers":["UniProtKB:O94325"],"synonyms":[{"name":"PTS1 receptor (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"PTS1R (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SPBC725.07","type":"related"},{"name":"Spom972h-PEX5","type":"exact"},{"name":"peroxin-5 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94325"}


id: PBO:0047812
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"forkhead box N1","termid":"PBO:0047812"}


id: GO:0009684
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of indole-3-acetic acid, a compound which functions as a growth regulator in plants.","definition_xrefs":["ISBN:0387969845"],"direct_ancestors":[{"relation_name":"is_a","term_name":"indoleacetic acid metabolic process","termid":"GO:0009683"},{"relation_name":"is_a","term_name":"auxin biosynthetic process","termid":"GO:0009851"},{"relation_name":"is_a","term_name":"indole-containing compound biosynthetic process","termid":"GO:0042435"},{"relation_name":"is_a","term_name":"monocarboxylic acid biosynthetic process","termid":"GO:0072330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"indoleacetic acid biosynthetic process","synonyms":[{"name":"IAA biosynthetic process","type":"exact"},{"name":"indole acetic acid biosynthesis","type":"exact"},{"name":"indole acetic acid biosynthetic process","type":"exact"},{"name":"indole-3-acetate biosynthesis","type":"exact"},{"name":"indole-3-acetate biosynthetic process","type":"exact"},{"name":"indole-acetic acid biosynthesis","type":"exact"},{"name":"indole-acetic acid biosynthetic process","type":"related"},{"name":"indoleacetic acid anabolism","type":"exact"},{"name":"indoleacetic acid biosynthesis","type":"exact"},{"name":"indoleacetic acid formation","type":"exact"},{"name":"indoleacetic acid synthesis","type":"exact"}],"termid":"GO:0009684"}


id: PBO:0068735
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U5A small nuclear 6, pseudogene","termid":"PBO:0068735"}


id: PBO:0077851
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"triosephosphate isomerase 1 pseudogene 2","termid":"PBO:0077851"}


id: MONDO:0003536
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete fallopian tube serous adenocarcinoma (obsolete MONDO:0003536)","termid":"MONDO:0003536","xrefs":{"Monarch":{"xref_id":"0003536"}}}


id: PBO:0029594
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_localization_to_plasma_membrane_during_vegetative_growth","termid":"PBO:0029594"}


id: GO:0005476
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: carnitine (mitochondrial) + O-acyl-L-carnitine (cytoplasm) = carnitine (cytoplasm) + O-acyl-L-carnitine (mitochondrial).","definition_xrefs":["PMID:9032458"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carnitine transmembrane transporter activity","termid":"GO:0015226"},{"relation_name":"is_a","term_name":"O-acyl-L-carnitine transmembrane transporter activity","termid":"GO:0015227"},{"relation_name":"is_a","term_name":"antiporter activity","termid":"GO:0015297"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"carnitine:O-acyl-L-carnitine antiporter activity","secondary_identifiers":["Reactome:R-HSA-200424"],"synonyms":[{"name":"carnitine/acyl carnitine carrier activity","type":"exact"},{"name":"carnitine:acyl carnitine carrier activity","type":"exact"},{"name":"fatty acyl carnitine carrier","type":"exact"}],"termid":"GO:0005476"}


id: PBO:0027463
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_intragenic_meiotic_recombination","termid":"PBO:0027463"}


id: PBO:0044008
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"casein beta","termid":"PBO:0044008"}


id: MONDO:0011643
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete permanent neonatal diabetes mellitus (obsolete MONDO:0011643)","termid":"MONDO:0011643","xrefs":{"Monarch":{"xref_id":"0011643"}}}


id: GO:0140037
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A molecular adaptor that recognizes and binds a target protein containing a SUMO modification and that brings the target protein into contact with another protein to allow those proteins to function in a coordinated way.","definition_xrefs":["PMID:26060076"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ubiquitin-like protein reader activity","termid":"GO:0140035"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0030674"},{"rel_name":"is_a","termid":"GO:0060090"}],"interesting_parent_ids":["GO:0003674","GO:0060090","GO:0030674"],"is_obsolete":false,"name":"SUMO-modified protein reader activity","synonyms":[{"name":"SUMO-dependent protein binding","type":"exact"}],"termid":"GO:0140037"}


id: PBO:0040065
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARPP19 pseudogene 1","termid":"PBO:0040065"}


id: PBO:0001684
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"swi5delta rhp57delta double mutant showed a repair profile very similar to that to the rhp51deltasingle mutant","termid":"PBO:0001684"}


id: PBO:0061219
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleolar protein 10","termid":"PBO:0061219"}


id: PBO:0069365
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 625, pseudogene","termid":"PBO:0069365"}


id: PBO:0056582
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial calcium uniporter","termid":"PBO:0056582"}


id: GO:0031502
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A complex that possesses dolichyl-phosphate-mannose-protein mannosyltransferase activity; usually includes members of the PMT1 and PMT2 protein subfamilies.","definition_xrefs":["GOC:mah","GOC:pr","PMID:15948957"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mannosyltransferase complex","termid":"GO:0031501"},{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"is_a","term_name":"endoplasmic reticulum protein-containing complex","termid":"GO:0140534"},{"relation_name":"part_of","term_name":"endoplasmic reticulum membrane","termid":"GO:0005789"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005783"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005789"}],"interesting_parent_ids":["GO:0005737","GO:0005789","GO:0032991","GO:0005783","GO:0005575"],"is_obsolete":false,"name":"dolichyl-phosphate-mannose-protein mannosyltransferase complex","synonyms":[{"name":"PMT family mannosyltransferase complex","type":"related"},{"name":"protein O-mannosyltransferase complex","type":"exact"}],"termid":"GO:0031502"}


id: PBO:0069251
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 506, pseudogene","termid":"PBO:0069251"}


id: PBO:0109277
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3112","termid":"PBO:0109277"}


id: MOD:00223
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to N6-mureinyl-L-lysine.","definition_xrefs":["PubMed:4261992","RESID:AA0218"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidoglycanated residue","termid":"MOD:01159"},{"relation_name":"is_a","term_name":"N6-acylated L-lysine","termid":"MOD:01875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"},{"rel_name":"is_a","termid":"MOD:01875"}],"interesting_parent_ids":["MOD:00764","MOD:01875"],"is_obsolete":false,"name":"N6-mureinyl-L-lysine","synonyms":[{"name":"MOD_RES N6-murein peptidoglycan lysine","type":"exact"},{"name":"N6-[(2R,6S)-2-(N-(N-mureinyl-(R)-alanyl)-(S)-glutamyl)amino-6-amino-6-carboxy-1-oxohex-1-yl]lysine","type":"exact"},{"name":"N6-mureinyl-L-lysine","type":"exact"}],"termid":"MOD:00223"}


id: MONDO:1010049
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acromegaly that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endocrine system disorder, non-human animal","termid":"MONDO:1011317"},{"relation_name":"is_a","term_name":"nervous system disorder, non-human animal","termid":"MONDO:1011336"},{"relation_name":"is_a","term_name":"reproductive system disorder, non-human animal","termid":"MONDO:1011354"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acromegaly, non-human animal","secondary_identifiers":["OMIA:000008"],"termid":"MONDO:1010049","xrefs":{"Monarch":{"xref_id":"1010049"}}}


id: MONDO:0006341
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete ovarian small cell carcinoma (obsolete MONDO:0006341)","termid":"MONDO:0006341","xrefs":{"Monarch":{"xref_id":"0006341"}}}


id: PBO:0091509
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"I:g.3855791delG","termid":"PBO:0091509"}


id: GO:1905071
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The disaggregation of an tight junction into its constituent components.","definition_xrefs":["GO_REF:0000079","GOC:rl","GOC:BHF","GOC:TermGenie","PMID:18718461"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tight junction organization","termid":"GO:0120193"},{"relation_name":"is_a","term_name":"cell-cell junction disassembly","termid":"GO:0150147"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tight junction disassembly","synonyms":[{"name":"occluding cell junction disassembly","type":"exact"},{"name":"occluding junction disassembly","type":"exact"}],"termid":"GO:1905071"}


id: PBO:0088036
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ubiquitin-binding protein of unknown function; contains one WD40 repeat in a beta-propeller fold; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm; homolog of human WDR48/UAF1, which is involved in regulating the Fanconi anemia pathway; deletion mutant is sensitive to various chemicals including phenanthroline, sanguinarine, and nordihydroguaiaretic acid","termid":"PBO:0088036"}


id: PBO:0055906
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 30","termid":"PBO:0055906"}


id: GO:0052762
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: gellan = n beta-D-4-deoxy-delta4,5-GlcAp-(1->4)-beta-D-Glcp-(1->4)-alpha-L-Rhap-(1->3)-beta-D-Glcp. This reaction is the eliminative cleavage of beta-D-glucopyranosyl-(1->4)-beta-D-glucopyranosyluronate bonds of gellan backbone, releasing tetrasaccharides containing a 4-deoxy-4,5-unsaturated D-glucopyranosyluronic acid at the non-reducing end; in the product, the abbreviations are D-glucose (Glc), D-glucuronic acid (GlcA), and L-rhamnose (Rha).","definition_xrefs":["GOC:mengo_curators","MetaCyc:RXN-12269"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on polysaccharides","termid":"GO:0016837"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"gellan lyase activity","secondary_identifiers":["EC:4.2.2.25"],"termid":"GO:0052762"}


id: PBO:0004656
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-MYND type zinc finger protein","termid":"PBO:0004656"}


id: GO:1904121
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Removes phosphatidylethanolamine from a membrane or a monolayer lipid particle, transports it through the aqueous phase while protected in a hydrophobic pocket, and brings it to an acceptor membrane or lipid particle.","definition_xrefs":["GOC:TermGenie","PMID:8606365","GO_REF:0000066"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid transfer activity","termid":"GO:0120014"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0120013"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0120013","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"phosphatidylethanolamine transfer activity","synonyms":[{"name":"intermembrane phosphatidylethanolamine transfer activity","type":"narrow"},{"name":"phosphatidylethanolamine carrier activity","type":"exact"},{"name":"phosphatidylethanolamine transporter activity","type":"broad"}],"termid":"GO:1904121"}


id: PBO:0065702
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"p53 upregulated regulator of p53 levels","termid":"PBO:0065702"}


id: GO:1903044
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within a membrane raft.","definition_xrefs":["PMID:19414744","GO_REF:0000087","GOC:dl","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to membrane","termid":"GO:0072657"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to membrane raft","synonyms":[{"name":"protein localisation in membrane raft","type":"exact"},{"name":"protein localisation to membrane raft","type":"exact"},{"name":"protein localization in membrane raft","type":"exact"}],"termid":"GO:1903044"}


id: GO:0099148
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of synaptic vesicle docking.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of vesicle docking","termid":"GO:0106020"},{"relation_name":"regulates","term_name":"synaptic vesicle docking","termid":"GO:0016081"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0140056"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0140056","GO:0008150"],"is_obsolete":false,"name":"regulation of synaptic vesicle docking","termid":"GO:0099148"}


id: PBO:0084932
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA export factor; required for biogenesis of the small ribosomal subunit; component of TREX-2 complex (Sac3p-Thp1p-Sus1p-Cdc31p) involved in transcription elongation and mRNA export from the nucleus; involved in post-transcriptional tethering of active genes to the nuclear periphery and to non-nascent mRNP; similar to the human germinal center-associated nuclear protein (GANP)","termid":"PBO:0084932"}


id: GO:0050471
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: O3-acetyl-L-serine + uracil = 3-(uracil-1-yl)-L-alanine + acetate.","definition_xrefs":["RHEA:11496"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring alkyl or aryl (other than methyl) groups","termid":"GO:0016765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016765"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016765","GO:0016740"],"is_obsolete":false,"name":"uracilylalanine synthase activity","secondary_identifiers":["MetaCyc:RXN-7541","EC:2.5.1.53"],"synonyms":[{"name":"3-O-acetyl-L-serine:uracil 1-(2-amino-2-carboxyethyl)transferase activity","type":"related"},{"name":"O(3)-acetyl-L-serine acetate-lyase (adding uracil) activity","type":"related"},{"name":"O3-acetyl-L-serine acetate-lyase (adding uracil)","type":"related"},{"name":"O3-acetyl-L-serine:uracil 1-(2-amino-2-carboxyethyl)transferase activity","type":"related"},{"name":"isowillardiine synthase activity","type":"related"},{"name":"willardiine synthase activity","type":"related"}],"termid":"GO:0050471"}


id: GO:0009523
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A photosystem that contains a pheophytin-quinone reaction center with associated accessory pigments and electron carriers. In cyanobacteria and chloroplasts, in the presence of light, PSII functions as a water-plastoquinone oxidoreductase, transferring electrons from water to plastoquinone, whereas other photosynthetic bacteria carry out anoxygenic photosynthesis and oxidize other compounds to re-reduce the photoreaction center.","definition_xrefs":["GOC:mah","GOC:ds","ISBN:0943088399","PMID:9821949"],"direct_ancestors":[{"relation_name":"is_a","term_name":"photosystem","termid":"GO:0009521"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"photosystem II","secondary_identifiers":["Wikipedia:Photosystem_II"],"termid":"GO:0009523"}


id: GO:0003331
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency, or extent of the controlled release of molecules that form the extracellular matrix, including carbohydrates and glycoproteins by a cell or a group of cells.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of extracellular matrix constituent secretion","termid":"GO:0003330"},{"relation_name":"is_a","term_name":"positive regulation of extracellular matrix organization","termid":"GO:1903055"},{"relation_name":"is_a","term_name":"positive regulation of secretion by cell","termid":"GO:1903532"},{"relation_name":"positively_regulates","term_name":"extracellular matrix constituent secretion","termid":"GO:0070278"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of extracellular matrix constituent secretion","termid":"GO:0003331"}


id: PBO:0053900
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1189","termid":"PBO:0053900"}


id: PBO:0084774
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial outer membrane protein, ERMES complex subunit; required for transmission of mitochondria to daughter cells; required for mitophagy; may influence import and assembly of outer membrane beta-barrel proteins; ERMES complex is often co-localized with peroxisomes and with concentrated areas of pyruvate dehydrogenase","termid":"PBO:0084774"}


id: PBO:0108544
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Clr6 histone deacetylase complex MRG family subunit Alp13","termid":"PBO:0108544"}


id: FYPO:0006458
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype that affects histone modification.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein modification","termid":"FYPO:0002494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002274","FYPO:0002494","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abnormal histone modification","termid":"FYPO:0006458"}


id: PBO:0082797
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the yeast dynactin complex; consisting of Nip100p, Jnm1p, and Arp1p; required for proper nuclear migration and spindle partitioning during mitotic anaphase B","termid":"PBO:0082797"}


id: GO:0006828
data:
  {"annotated_genes":["SJAG_03850","SJAG_01007","SJAG_04867","SJAG_04096"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[61576,64370,109044,71213],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071421"}]},"cv_name":"biological_process","definition":"The directed movement of manganese (Mn) ions into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transition metal ion transport","termid":"GO:0000041"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01007":null,"SJAG_03850":null,"SJAG_04096":null,"SJAG_04867":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"manganese ion transport","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"termid":"GO:0006828","terms_by_termid":{"GO:0071421":null}}


id: GO:1903278
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of sodium ion export across the plasma membrane.","definition_xrefs":["GOC:BHF","GO_REF:0000058","GOC:rl","GOC:TermGenie","PMID:17095720"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of sodium ion transmembrane transport","termid":"GO:1902307"},{"relation_name":"is_a","term_name":"regulation of sodium ion export across plasma membrane","termid":"GO:1903276"},{"relation_name":"positively_regulates","term_name":"sodium ion export across plasma membrane","termid":"GO:0036376"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"positive regulation of sodium ion export across plasma membrane","secondary_identifiers":["GO:1903275"],"synonyms":[{"name":"activation of sodium export","type":"narrow"},{"name":"activation of sodium ion export","type":"narrow"},{"name":"activation of sodium ion export from cell","type":"narrow"},{"name":"positive regulation of sodium export","type":"related"},{"name":"positive regulation of sodium ion export","type":"related"},{"name":"positive regulation of sodium ion export from cell","type":"exact"},{"name":"up regulation of sodium export","type":"related"},{"name":"up regulation of sodium ion export","type":"related"},{"name":"up regulation of sodium ion export from cell","type":"exact"},{"name":"up-regulation of sodium export","type":"related"},{"name":"up-regulation of sodium ion export","type":"related"},{"name":"up-regulation of sodium ion export from cell","type":"exact"},{"name":"upregulation of sodium export","type":"related"},{"name":"upregulation of sodium ion export","type":"related"},{"name":"upregulation of sodium ion export from cell","type":"exact"}],"termid":"GO:1903278"}


id: PBO:0070018
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1315, pseudogene","termid":"PBO:0070018"}


id: PBO:0045541
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dihydrouridine synthase 1 like","termid":"PBO:0045541"}


id: PBO:0039019
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aftiphilin","termid":"PBO:0039019"}


id: MONDO:0020423
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"coronary artery congenital malformation","termid":"MONDO:0015203"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stenosis or atrophy of the coronary ostium","secondary_identifiers":["GARD:19643","MEDGEN:1842382","Orphanet:99087","UMLS:C5575847"],"synonyms":[{"name":"coronary ostial stenosis or atresia","type":"exact"},{"name":"stenosis or atresia of the coronary ostium","type":"related"}],"termid":"MONDO:0020423","xrefs":{"Monarch":{"xref_id":"0020423"}}}


id: PBO:0038447
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alanine and arginine rich domain containing protein","termid":"PBO:0038447"}


id: GO:0010797
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the volume of a multivesicular body as part of the directed movement of substances from endosomes to lysosomes or vacuoles.","definition_xrefs":["GOC:tb","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of multivesicular body size involved in endosome transport (obsolete GO:0010797)","termid":"GO:0010797"}


id: GO:0140833
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + RNA polymerase II large subunit CTD heptapeptide repeat (consensus YSPTSPS) = ADP + H+ + RNA polymerase II large subunit phosphotyrosine (position 1).","definition_xrefs":["PMID:28248323"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II CTD heptapeptide repeat kinase activity","termid":"GO:0008353"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0004672","GO:0003824","GO:0016301","GO:0140096"],"is_obsolete":false,"name":"RNA polymerase II CTD heptapeptide repeat Y1 kinase activity","synonyms":[{"name":"RNA polymerase II C-terminal domain Y1 kinase activity","type":"exact"}],"termid":"GO:0140833"}


id: PBO:0070458
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L4 pseudogene 1","termid":"PBO:0070458"}


id: PBO:0089004
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino]imidazole-4-carboxamide isomerase His6","termid":"PBO:0089004"}


id: PBO:0073965
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 22 member 14","termid":"PBO:0073965"}


id: PBO:0079640
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBE2Q2 pseudogene 11","termid":"PBO:0079640"}


id: PBO:0089653
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"20S proteasome complex subunit alpha 2, Pre8","termid":"PBO:0089653"}


id: MONDO:0005079
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A usually exophytic mass attached to the underlying tissue by a broad base or a thin stalk. Polyps can be neoplastic or non-neoplastic. Neoplastic polyps usually represent proliferations of the epithelium, and are commonly seen in the gastrointestinal tract. Polyps of the gastrointestinal tract are often called adenomas, are associated with dysplasia, and may eventually transform into carcinomas. Non-neoplastic polyps may be inflammatory, degenerative, or the result of malformations.","definition_xrefs":["NCIT:C3340"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"neoplasm","termid":"MONDO:0005070"},{"relation_name":"is_a","term_name":"cancer or benign tumor","termid":"MONDO:0045024"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polyp","secondary_identifiers":["UMLS:C0032584","MESH:D011127","MEDGEN:19397","ICD10CM:N84","SCTID:441456002","EFO:0000662"],"synonyms":[{"name":"polyp","type":"exact"}],"termid":"MONDO:0005079","xrefs":{"Monarch":{"xref_id":"0005079"}}}


id: PBO:0079117
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA splicing endonuclease subunit 54","termid":"PBO:0079117"}


id: MONDO:0017998
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any neurodegeneration with brain iron accumulation in which the cause of the disease is a mutation in the PLA2G6 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete disorder of phospholipids, sphingolipids and fatty acids biosynthesis with central nervous system predominant involvement (obsolete MONDO:0018118)","termid":"MONDO:0018118"},{"relation_name":"excluded_subClassOf","term_name":"neurodegeneration with brain iron accumulation","termid":"MONDO:0018307"},{"relation_name":"is_a","term_name":"neurodegeneration with brain iron accumulation","termid":"MONDO:0018307"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002039"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0005066","MONDO:0002039"],"is_obsolete":false,"name":"PLA2G6-associated neurodegeneration","secondary_identifiers":["Orphanet:329303","NORD:1302","GARD:12567"],"synonyms":[{"name":"PLA2G6 neurodegeneration with brain iron accumulation","type":"exact"},{"name":"PLAN","type":"exact"},{"name":"neurodegeneration with brain iron accumulation caused by mutation in PLA2G6","type":"exact"}],"termid":"MONDO:0017998","xrefs":{"Monarch":{"xref_id":"0017998"}}}


id: FYPO:0002943
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a cell is shaped in the form of a spheroid, and has a larger volume than normal, when the cell undergoes transition from G0 phase to G1. In spheroid cells, there is much less difference between the long and short axes of the cell than in wild type. Spheroid cells may shorter than normal, with approximately the same diameter as normal, or they may be enlarged.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"swollen spheroid cell","termid":"FYPO:0002941"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000005","FYPO:0001985"],"is_obsolete":false,"name":"swollen spheroid cell during G0 to G1 transition","synonyms":[{"name":"enlarged spheroid cell during G0 to G1 transition","type":"related"},{"name":"enlarged volume spheroid cell during G0 to G1 transition","type":"exact"},{"name":"large spheroid cell during G0 to G1 transition","type":"related"},{"name":"spheroid cell with increased cell size during G0 to G1 transition","type":"related"},{"name":"spheroid cell with increased cell volume during G0 to G1 transition","type":"exact"},{"name":"swollen rounded cell during G0 to G1 transition","type":"exact"},{"name":"swollen spheroid cell during cell cycle re-entry","type":"exact"},{"name":"swollen spheroid cell during cell quiescence to G1 transition","type":"exact"},{"name":"swollen spheroid cell during exit from cell quiescence","type":"exact"},{"name":"swollen spheroid cell during quiescence to G1 transition","type":"exact"},{"name":"swollen spheroid cell during recovery from quiescence","type":"exact"}],"termid":"FYPO:0002943"}


id: PBO:0060572
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NBPF member 8","termid":"PBO:0060572"}


id: PBO:0025464
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"this protein is shorter than the S. cerevisiae ortholog and missing the enoyl-CoA hydratase domain. Other genes for fatty acid beta-oxidation are also absent","termid":"PBO:0025464"}


id: GO:0097277
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any biological process involved in the maintenance of an internal steady state of urea at the level of the cell.","definition_xrefs":["PMID:12695560","GOC:yaf"],"gene_count":0,"genotype_count":0,"name":"obsolete cellular urea homeostasis (obsolete GO:0097277)","termid":"GO:0097277"}


id: PBO:0027858
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_kinase_activity_during_mitotic_S_phase_during_cellular_response_to_DNA_damage","termid":"PBO:0027858"}


id: MONDO:0023133
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Faye-Petersen-Ward-Carey syndrome","secondary_identifiers":["UMLS:C2931417","MESH:C537076","MEDGEN:419797"],"termid":"MONDO:0023133","xrefs":{"Monarch":{"xref_id":"0023133"}}}


id: GO:0018773
data:
  {"annotated_genes":["SJAG_00493"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73237],"is_not":false,"summary":null,"term":"GO:0018773"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: acetylpyruvate + H2O = acetate + H+ + pyruvate.","definition_xrefs":["RHEA:16097"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on acid carbon-carbon bonds, in ketonic substances","termid":"GO:0016823"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00493":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"acetylpyruvate hydrolase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["KEGG_REACTION:R00324","UM-BBD_reactionID:r0095","EC:3.7.1.6","MetaCyc:ACETYLPYRUVATE-HYDROLASE-RXN"],"synonyms":[{"name":"2,4-dioxopentanoate acetylhydrolase activity","type":"related"}],"termid":"GO:0018773","terms_by_termid":{"GO:0018773":null}}


id: FYPO:0004097
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which actomyosin contractile ring contraction is normal (i.e. indistinguishable from wild type). Contractile ring contraction is the part of cytokinesis in which the actomyosin contractile ring constricts.","definition_xrefs":["PomBase:mah","GO:1902404"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal mitotic cell cycle process","termid":"FYPO:0002741"},{"relation_name":"is_a","term_name":"normal actomyosin contractile ring organization","termid":"FYPO:0007827"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0001320","FYPO:0001312"],"is_obsolete":false,"name":"normal actomyosin contractile ring contraction","synonyms":[{"name":"normal actomyosin contractile ring constriction","type":"exact"},{"name":"normal actomyosin contractile ring contraction during mitotic cell cycle","type":"related"},{"name":"normal actomyosin contractile ring contraction during vegetative growth","type":"exact"},{"name":"normal contractile ring contraction","type":"exact"},{"name":"normal cytokinetic contractile ring contraction","type":"exact"},{"name":"normal mitotic actomyosin contractile ring contraction","type":"exact"},{"name":"normal mitotic contractile ring contraction","type":"exact"}],"termid":"FYPO:0004097"}


id: GO:1903875
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to corticosterone.","definition_xrefs":["GOC:mr","PMID:10802282","GOC:TermGenie","GO_REF:0000067"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alcohol binding","termid":"GO:0043178"},{"relation_name":"is_a","term_name":"steroid hormone binding","termid":"GO:1990239"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0008289"}],"interesting_parent_ids":["GO:0008289","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"corticosterone binding","termid":"GO:1903875"}


id: MOD:00739
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes a cluster of iron and sulfur atoms for hydrogen atoms.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iron containing modified residue","termid":"MOD:00738"},{"relation_name":"is_a","term_name":"sulfur containing modified residue","termid":"MOD:00860"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iron-sulfur cluster containing modification","synonyms":[{"name":"FeSRes","type":"exact"}],"termid":"MOD:00739"}


id: FYPO:0000409
data:
  {"alleles_by_uniquename":{"SJAG_01956:allele-1":{"allele_type":"amino_acid_mutation","description":"E405K ts","gene_uniquename":"SJAG_01956","name":"nuc2-1051","uniquename":"SJAG_01956:allele-1"},"SJAG_03351:allele-1":{"allele_type":"amino_acid_mutation","description":"A186T ts","gene_uniquename":"SJAG_03351","name":"cut23-415","uniquename":"SJAG_03351:allele-1"},"SJAG_03575:allele-1":{"allele_type":"amino_acid_mutation","description":"E548K ts","gene_uniquename":"SJAG_03575","name":"apc2-361","uniquename":"SJAG_03575:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[119878,119877,119879],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000324"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which one or more cell cycle phase transitions begins later than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"},{"relation_name":"is_a","term_name":"abnormal cell cycle phase transition","termid":"FYPO:0005273"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01956":null,"SJAG_03351":null,"SJAG_03575":null},"genotype_count":3,"genotypes_by_uniquename":{"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"apc2-361(E548K ts)","display_uniquename":"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03575:allele-1","expression":"Not assayed or wild type"}]}]},"cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cut23-415(A186T ts)","display_uniquename":"cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03351:allele-1","expression":"Not assayed or wild type"}]}]},"nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"nuc2-1051(E405K ts)","display_uniquename":"nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01956:allele-1","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0000631","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"delayed cell cycle phase transition","references_by_uniquename":{"PMID:23786411":null},"single_locus_annotated_genes":["SJAG_03575","SJAG_03351","SJAG_01956"],"single_locus_genotype_uniquenames":["cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"cell cycle progression: delayed","type":"related"},{"name":"delayed cell cycle phase transition during mitotic cell cycle","type":"related"},{"name":"delayed cell cycle phase transition during vegetative growth","type":"exact"}],"termid":"FYPO:0000409","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000137":null,"FYPO:0000324":null}}


id: GO:0051986
data:
  {"annotated_genes":["SJAG_03048"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102722],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902424"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the attachment of spindle microtubules to the kinetochore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of chromosome segregation","termid":"GO:0051985"},{"relation_name":"is_a","term_name":"regulation of attachment of spindle microtubules to kinetochore","termid":"GO:0051988"},{"relation_name":"negatively_regulates","term_name":"attachment of spindle microtubules to kinetochore","termid":"GO:0008608"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03048":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"negative regulation of attachment of spindle microtubules to kinetochore","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of attachment of spindle microtubules to kinetochore","type":"exact"},{"name":"down-regulation of attachment of spindle microtubules to kinetochore","type":"exact"},{"name":"downregulation of attachment of spindle microtubules to kinetochore","type":"exact"},{"name":"inhibition of attachment of spindle microtubules to kinetochore","type":"narrow"}],"termid":"GO:0051986","terms_by_termid":{"GO:1902424":null}}


id: PBO:0055549
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2985","termid":"PBO:0055549"}


id: GO:0009862
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals mediated by salicylic acid involved in systemic acquired resistance.","definition_xrefs":["GOC:jy"],"direct_ancestors":[{"relation_name":"is_a","term_name":"salicylic acid mediated signaling pathway","termid":"GO:0009863"},{"relation_name":"part_of","term_name":"systemic acquired resistance","termid":"GO:0009627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"systemic acquired resistance, salicylic acid mediated signaling pathway","synonyms":[{"name":"salicylic acid mediated signaling pathway (systemic acquired resistance)","type":"exact"},{"name":"systemic acquired resistance, salicylic acid mediated signalling pathway","type":"exact"}],"termid":"GO:0009862"}


id: PBO:0047048
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 110 member C","termid":"PBO:0047048"}


id: PBO:0068293
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho family GTPase 2","termid":"PBO:0068293"}


id: PBO:0060918
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurofibromin 1 pseudogene 5","termid":"PBO:0060918"}


id: PBO:0081106
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zyg-11 related cell cycle regulator","termid":"PBO:0081106"}


id: PBO:0050265
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosomal binding domain 2 pseudogene 43","termid":"PBO:0050265"}


id: GO:0031833
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type 7 serotonin receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled serotonin receptor binding","termid":"GO:0031821"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"type 7 serotonin receptor binding","synonyms":[{"name":"5-hydroxytryptamine 7 receptor binding","type":"exact"},{"name":"type 7 serotonin receptor ligand","type":"narrow"}],"termid":"GO:0031833"}


id: MONDO:1010302
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Scoliosis that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"musculoskeletal system disorder, non-human animal","termid":"MONDO:1011335"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"scoliosis, non-human animal","secondary_identifiers":["OMIA:000891"],"termid":"MONDO:1010302","xrefs":{"Monarch":{"xref_id":"1010302"}}}


id: FYPO:0007147
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which Mei2 nuclear dot formation is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein-containing complex assembly","termid":"FYPO:0006839"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal Mei2 nuclear dot formation","synonyms":[{"name":"normal Mei2 nuclear dot assembly","type":"exact"},{"name":"normal meiRNA nuclear dot formation","type":"related"}],"termid":"FYPO:0007147"}


id: MONDO:1011576
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Neuronal ceroid lipofuscinosis that occurs in peach-faced lovebird.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bird disease","termid":"MONDO:0024905"},{"relation_name":"is_a","term_name":"neuronal ceroid lipofuscinosis, non-human animal","termid":"MONDO:1011430"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuronal ceroid lipofuscinosis, peach-faced lovebird","secondary_identifiers":["OMIA:000181-60468"],"termid":"MONDO:1011576","xrefs":{"Monarch":{"xref_id":"1011576"}}}


id: PBO:0090472
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L44","termid":"PBO:0090472"}


id: PBO:0018044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TREX complex subunit Tho1 (predicted)","termid":"PBO:0018044"}


id: PBO:0080640
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat domain 87B, pseudogene","termid":"PBO:0080640"}


id: PBO:0073145
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEC23 homolog B, COPII coat complex component","termid":"PBO:0073145"}


id: GO:0018226
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of peptidyl-cysteine to form peptidyl-S-farnesyl-L-cysteine; formation of S-farnesycysteine may be coupled with subsequent cleavage of a carboxy-terminal tripeptide for the CXXX motif and methyl esterification of the farnesylated cysteine; the residue may be found at the first position in the sequence motif C-X-X-(SAQCMT)* where the second and third positions are usually aliphatic.","definition_xrefs":["RESID:AA0102"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-S-farnesyl-L-cysteine biosynthetic process from peptidyl-cysteine (obsolete GO:0018226)","synonyms":[{"name":"peptidyl-S-farnesyl-L-cysteine anabolism from peptidyl-cysteine","type":"exact"},{"name":"peptidyl-S-farnesyl-L-cysteine formation from peptidyl-cysteine","type":"exact"},{"name":"peptidyl-S-farnesyl-L-cysteine synthesis from peptidyl-cysteine","type":"exact"}],"termid":"GO:0018226"}


id: GO:0047771
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-5-carboxymethylhydantoin + H2O = N-carbamoyl-L-aspartate + H+.","definition_xrefs":["RHEA:12028","EC:3.5.2.4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides","termid":"GO:0016812"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016810"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0003824","GO:0016810"],"is_obsolete":false,"name":"carboxymethylhydantoinase activity","secondary_identifiers":["KEGG_REACTION:R02284","MetaCyc:CARBOXYMETHYLHYDANTOINASE-RXN"],"synonyms":[{"name":"L-5-carboxymethylhydantoin amidohydrolase activity","type":"related"},{"name":"hydantoin hydrolase activity","type":"related"}],"termid":"GO:0047771"}


id: GO:0000378
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The RNA metabolic process that joins two exons, each of which has free ends that were generated by endonucleolytic cleavages, by a ligation reaction.","definition_xrefs":["ISBN:0879695897","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA metabolic process","termid":"GO:0016070"},{"relation_name":"part_of","term_name":"RNA splicing, via endonucleolytic cleavage and ligation","termid":"GO:0000394"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"RNA exon ligation","termid":"GO:0000378"}


id: GO:0045115
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of beta 2 integrins.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of integrin biosynthetic process","termid":"GO:0045113"},{"relation_name":"regulates","term_name":"beta 2 integrin biosynthetic process","termid":"GO:0045114"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of beta 2 integrin biosynthetic process","synonyms":[{"name":"regulation of beta 2 integrin anabolism","type":"exact"},{"name":"regulation of beta 2 integrin biosynthesis","type":"exact"},{"name":"regulation of beta 2 integrin formation","type":"exact"},{"name":"regulation of beta 2 integrin synthesis","type":"exact"}],"termid":"GO:0045115"}


id: GO:0047502
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (+)-cis-sabinol + NAD+ = (1S,5S)-sabinone + H+ + NADH.","definition_xrefs":["EC:1.1.1.228","RHEA:18329"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"(+)-sabinol dehydrogenase activity","secondary_identifiers":["MetaCyc:+-SABINOL-DEHYDROGENASE-RXN","KEGG_REACTION:R03745"],"synonyms":[{"name":"(+)-cis-sabinol dehydrogenase activity","type":"related"},{"name":"(+)-cis-sabinol:NAD+ oxidoreductase activity","type":"related"}],"termid":"GO:0047502"}


id: PBO:0091121
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial glutamyl-tRNA amidotransferase complex subunit Gta3","termid":"PBO:0091121"}


id: GO:0000954
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving the catabolism of amino acids to produce carboxylic acids with one carbon less than the starting amino acid. In S. cerevisiae, this is known to occur for leucine, isoleucine, valine, methionine, phenylalanine, tyrosine, or tryptophan. When methionine is used as the substrate, 3-methylthiopropanoate is produced. Often referred to as the Ehrlich pathway, these reactions generally occur during fermentation to produce a variety of carboxylic acids, sometimes collectively referred to as fusel acids. Depending on the redox state of the cells, alcohol derivatives may be produced instead of carboxylic acids.","definition_xrefs":["PMID:18281432","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid catabolic process to carboxylic acid via Ehrlich pathway","termid":"GO:0000948"},{"relation_name":"is_a","term_name":"fatty acid biosynthetic process","termid":"GO:0006633"},{"relation_name":"is_a","term_name":"methionine catabolic process","termid":"GO:0009087"},{"relation_name":"is_a","term_name":"sulfur compound biosynthetic process","termid":"GO:0044272"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0006520","GO:0006790","GO:0006629","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"methionine catabolic process to 3-methylthiopropanoate","termid":"GO:0000954"}


id: GO:0042135
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of any of a group of substances that are released on excitation from the axon terminal of a presynaptic neuron of the central or peripheral nervous system and travel across the synaptic cleft to either excite or inhibit the target cell.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete neurotransmitter catabolic process (obsolete GO:0042135)","synonyms":[{"name":"neurotransmitter breakdown","type":"exact"},{"name":"neurotransmitter catabolism","type":"exact"},{"name":"neurotransmitter degradation","type":"exact"}],"termid":"GO:0042135"}


id: PBO:0043934
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytotoxic and regulatory T cell molecule","termid":"PBO:0043934"}


id: MONDO:0017378
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete polymicrogyria-turricephaly-hypogenitalism syndrome (obsolete MONDO:0017378)","secondary_identifiers":["Orphanet:2925"],"termid":"MONDO:0017378","xrefs":{"Monarch":{"xref_id":"0017378"}}}


id: MONDO:0001549
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acute kidney injury associated with microangiopathic hemolytic anemia and thrombocytopenia.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"hemolytic anemia","termid":"MONDO:0003664"},{"relation_name":"excluded_subClassOf","term_name":"obsolete rare constitutional hemolytic anemia (obsolete MONDO:0015910)","termid":"MONDO:0015910"},{"relation_name":"excluded_subClassOf","term_name":"thrombotic microangiopathy","termid":"MONDO:0019737"},{"relation_name":"is_a","term_name":"blood coagulation disease","termid":"MONDO:0001531"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"hemolytic-uremic syndrome","secondary_identifiers":["MEDGEN:42403","ICD10CM:D59.3","SCTID:111407006","ICD9:283.11","MESH:D006463","DOID:12554","Orphanet:544458","UMLS:C0019061","GARD:22233","NCIT:C75545"],"synonyms":[{"name":"HUS","type":"exact"},{"name":"acute renal failure, thrombocytopenia, and microangiopathic hemolytic anaemia associated with distorted erythrocytes ('burr cells')","type":"related"},{"name":"acute renal failure, thrombocytopenia, and microangiopathic hemolytic anemia associated with distorted erythrocytes ('burr cells')","type":"related"},{"name":"haemolytic-uraemic syndrome","type":"exact"},{"name":"hemolytic uremic syndrome","type":"exact"}],"termid":"MONDO:0001549","xrefs":{"Monarch":{"xref_id":"0001549"}}}


id: MONDO:0008387
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ring dermoid of cornea is characterized by annular limbal dermoids (growths with a skin-like structure) with corneal and conjunctival extension. Less than 30 cases have been described. Transmission is autosomal dominant and mutations in the PITX2 gene have been suggested as a potential cause of the condition.","definition_xrefs":["Orphanet:91481"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"eye neoplasm","termid":"MONDO:0021220"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"ring dermoid of cornea","secondary_identifiers":["icd11.foundation:271430543","DOID:0111548","MESH:C535684","SCTID:723499000","OMIM:180550","GARD:9696","MEDGEN:357922","UMLS:C1867155"],"synonyms":[{"name":"RDC","type":"related"},{"name":"RING dermoid of cornea","type":"related"},{"name":"Ring dermoid syndrome","type":"exact"},{"name":"bilateral, annular limbal dermoids with corneal and conjunctival extension","type":"related"},{"name":"ring dermoid of cornea","type":"exact"}],"termid":"MONDO:0008387","xrefs":{"Monarch":{"xref_id":"0008387"}}}


id: MONDO:0003112
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant germ cell tumor that arises from the stomach. It includes choriocarcinoma and immature teratoma.","definition_xrefs":["NCIT:C5486"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gastric cancer","termid":"MONDO:0001056"},{"relation_name":"is_a","term_name":"extragonadal germ cell cancer","termid":"MONDO:0003113"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"malignant gastric germ cell tumor","secondary_identifiers":["MEDGEN:233663","UMLS:C1334584","DOID:4716"],"synonyms":[{"name":"germ cell tumor of the stomach","type":"exact"},{"name":"germ cell tumour of the stomach","type":"exact"},{"name":"malignant gastric germ cell neoplasm","type":"exact"},{"name":"malignant gastric germ cell tumor","type":"exact"},{"name":"malignant germ cell neoplasm of stomach","type":"exact"},{"name":"malignant germ cell neoplasm of the stomach","type":"exact"},{"name":"malignant germ cell tumor of stomach","type":"exact"},{"name":"malignant germ cell tumor of the stomach","type":"exact"},{"name":"malignant germ cell tumour of stomach","type":"exact"},{"name":"malignant germ cell tumour of the stomach","type":"exact"}],"termid":"MONDO:0003112","xrefs":{"Monarch":{"xref_id":"0003112"}}}


id: PBO:0108678
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoplasmic poly(A) polymerase Cid13","termid":"PBO:0108678"}


id: PR:Q9HDU2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An N-acetylgalactosamine kinase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO04144","PANTHER:PTHR10457:SF7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"galactokinase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBPB2B2.13","secondary_identifiers":["UniProtKB:Q9HDU2"],"synonyms":[{"name":"Spom972h-GALK2","type":"exact"},{"name":"galactose kinase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9HDU2"}


id: PR:O13934
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- atg15 gene.","definition_xrefs":["UniProtKB:O13934","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lipase atg15 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23C4.16c","synonyms":[{"name":"Spom972h-atg15","type":"exact"},{"name":"autophagy-related protein 15 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13934"}


id: PBO:0000204
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAP kinase Sty1","termid":"PBO:0000204"}


id: GO:0042590
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an antigen-presenting cell expresses a peptide antigen of exogenous origin on its cell surface in association with an MHC class I protein complex. The peptide antigen is typically, but not always, processed from a whole protein. Class I here refers to classical class I molecules.","definition_xrefs":["GOC:add","ISBN:0781735149","PMID:15771591"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antigen processing and presentation of peptide antigen via MHC class I","termid":"GO:0002474"},{"relation_name":"is_a","term_name":"antigen processing and presentation of exogenous peptide antigen","termid":"GO:0002478"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"antigen processing and presentation of exogenous peptide antigen via MHC class I","secondary_identifiers":["Reactome:R-HSA-1236975"],"synonyms":[{"name":"antigen presentation, exogenous antigen via MHC class I","type":"exact"},{"name":"antigen presentation, exogenous antigen via major histocompatibility complex class I","type":"exact"},{"name":"cross presentation","type":"broad"},{"name":"cross priming","type":"broad"},{"name":"cross-presentation","type":"broad"},{"name":"cross-priming","type":"broad"},{"name":"exogenous peptide antigen processing and presentation via MHC class I","type":"exact"}],"termid":"GO:0042590"}


id: GO:0002025
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that results in an increase in the diameter of an artery during the norepinephrine-epinephrine response to blood pressure change.","definition_xrefs":["PMID:10358008","GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of systemic arterial blood pressure","termid":"GO:0003085"},{"relation_name":"is_a","term_name":"vasodilation","termid":"GO:0042311"},{"relation_name":"part_of","term_name":"regulation of systemic arterial blood pressure by norepinephrine-epinephrine","termid":"GO:0001993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"norepinephrine-epinephrine-mediated vasodilation involved in regulation of systemic arterial blood pressure","synonyms":[{"name":"noradrenaline-adrenaline vasodilation involved in regulation of blood pressure","type":"exact"},{"name":"norepinephrine-epinephrine vasodilation during blood pressure regulation","type":"exact"},{"name":"vasodilation by norepinephrine-epinephrine involved in regulation of systemic arterial blood pressure","type":"exact"}],"termid":"GO:0002025"}


id: FYPO:0004462
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the nucleus is abolished when the cell is subject to nitrogen starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to nucleus","termid":"FYPO:0003450"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000138","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abolished protein localization to nucleus during nitrogen starvation","synonyms":[{"name":"abolished protein localisation to nucleus during nitrogen starvation","type":"exact"},{"name":"abolished protein localization to nucleus during nitrogen depletion","type":"exact"},{"name":"abolished protein localization to nucleus during nitrogen deprivation","type":"exact"},{"name":"nuclear exclusion during nitrogen starvation","type":"related"},{"name":"nuclear protein exclusion during nitrogen starvation","type":"related"},{"name":"protein localization to nucleus abolished during nitrogen starvation","type":"exact"}],"termid":"FYPO:0004462"}


id: MONDO:0012551
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"alopecia, isolated","termid":"MONDO:0000005"},{"relation_name":"is_a","term_name":"alopecia totalis","termid":"MONDO:0019080"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"alopecia areata 2","secondary_identifiers":["OMIM:610753","MEDGEN:343971","UMLS:C1853104","MESH:C565186","GARD:15496"],"synonyms":[{"name":"AA2","type":"exact"},{"name":"alopecia areata 2","type":"exact"}],"termid":"MONDO:0012551","xrefs":{"Monarch":{"xref_id":"0012551"}}}


id: PBO:0068127
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 434","termid":"PBO:0068127"}


id: PR:O42646
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ubc6 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O42646"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-conjugating enzyme E2 6 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC10F6.05c","synonyms":[{"name":"E2 ubiquitin-conjugating enzyme 6 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ubc6","type":"exact"},{"name":"ubiquitin carrier protein 6 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ubiquitin-protein ligase 6 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O42646"}


id: PBO:0046127
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 4 gamma 1","termid":"PBO:0046127"}


id: PBO:0028301
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_phosphatase_activity_during_mitosis","termid":"PBO:0028301"}


id: MONDO:0971123
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"retinal hemangioblastoma","termid":"MONDO:0003343"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"isolated retinal racemose hemangioma","secondary_identifiers":["MEDGEN:1863667","Orphanet:674924","UMLS:C5890449"],"termid":"MONDO:0971123","xrefs":{"Monarch":{"xref_id":"0971123"}}}


id: MONDO:0019329
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"lymphangioma","termid":"MONDO:0002013"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"microcystic lymphatic malformation","secondary_identifiers":["GARD:13020","NCIT:C45485","MEDGEN:1843242","Orphanet:79490","icd11.foundation:1796778763","UMLS:C4738056"],"synonyms":[{"name":"capillary lymphangioma","type":"related"},{"name":"capillary lymphatic malformation","type":"exact"},{"name":"cutaneous lymphangioma circumscriptum","type":"exact"},{"name":"microcystic infiltrating lymphatic malformation","type":"exact"},{"name":"microcystic lymphangioma","type":"exact"},{"name":"superficial lymphangioma","type":"exact"},{"name":"superficial lymphatic malformation","type":"exact"}],"termid":"MONDO:0019329","xrefs":{"Monarch":{"xref_id":"0019329"}}}


id: PBO:0066961
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 263","termid":"PBO:0066961"}


id: GO:0048297
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of isotype switching to IgA isotypes.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of isotype switching","termid":"GO:0045829"},{"relation_name":"is_a","term_name":"regulation of isotype switching to IgA isotypes","termid":"GO:0048296"},{"relation_name":"negatively_regulates","term_name":"isotype switching to IgA isotypes","termid":"GO:0048290"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0006310"},{"rel_name":"negatively_regulates","termid":"GO:0006259"},{"rel_name":"negatively_regulates","termid":"GO:0006310"}],"interesting_parent_ids":["GO:0010467","GO:0006310","GO:0008150","GO:0006259"],"is_obsolete":false,"name":"negative regulation of isotype switching to IgA isotypes","synonyms":[{"name":"down regulation of isotype switching to IgA isotypes","type":"exact"},{"name":"down-regulation of isotype switching to IgA isotypes","type":"exact"},{"name":"downregulation of isotype switching to IgA isotypes","type":"exact"},{"name":"inhibition of isotype switching to IgA isotypes","type":"narrow"},{"name":"negative regulation of class switch recombination to IgA isotypes","type":"exact"},{"name":"negative regulation of class switching to IgA isotypes","type":"exact"},{"name":"negative regulation of isotype switch recombination to IgA isotypes","type":"exact"}],"termid":"GO:0048297"}


id: GO:1901748
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving leukotriene D4.","definition_xrefs":["GOC:TermGenie","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukotriene metabolic process","termid":"GO:0006691"},{"relation_name":"is_a","term_name":"sulfur compound metabolic process","termid":"GO:0006790"},{"relation_name":"is_a","term_name":"amide metabolic process","termid":"GO:0043603"},{"relation_name":"is_a","term_name":"fatty acid derivative metabolic process","termid":"GO:1901568"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0006629","GO:0006790","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"leukotriene D4 metabolic process","synonyms":[{"name":"leukotriene D4 metabolism","type":"exact"}],"termid":"GO:1901748"}


id: PBO:0025512
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lyase deficiency","termid":"PBO:0025512"}


id: PBO:0076749
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thymine DNA glycosylase","termid":"PBO:0076749"}


id: PBO:0051354
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 2/OR2-7 (pseudogene)","termid":"PBO:0051354"}


id: GO:0086044
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that mediates signaling interactions between an atrial cardiomyocyte and an AV node cell by transfer of current between their adjacent cytoplasms via intercellular protein channels.","definition_xrefs":["GOC:BHF","GOC:mtg_cardiac_conduct_nov11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell communication by electrical coupling involved in cardiac conduction","termid":"GO:0086064"},{"relation_name":"is_a","term_name":"atrial cardiac muscle cell to AV node cell communication","termid":"GO:0086066"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"atrial cardiac muscle cell to AV node cell communication by electrical coupling","synonyms":[{"name":"atrial cardiomyocyte to AV node cell communication by electrical coupling","type":"exact"},{"name":"atrial cardiomyocyte to atrioventricular node cell communication by electrical coupling","type":"exact"}],"termid":"GO:0086044"}


id: GO:0030299
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Uptake of cholesterol into the blood by absorption from the small intestine.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intestinal lipid absorption","termid":"GO:0098856"},{"relation_name":"part_of","term_name":"lipid digestion","termid":"GO:0044241"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"intestinal cholesterol absorption","termid":"GO:0030299"}


id: FYPO:0008157
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which histone deacetylation is abnormal at the silent-mating type locus.","direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone deacetylation during vegetative growth","termid":"FYPO:0000201"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0002274","FYPO:0005447","FYPO:0000002","FYPO:0002494","FYPO:0001985"],"is_obsolete":false,"name":"abnormal histone deacetylation at the silent mating-type locus during vegetative growth","termid":"FYPO:0008157"}


id: PBO:0084870
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial ribosomal protein of the small subunit; has similarity to E. coli S7 ribosomal protein","termid":"PBO:0084870"}


id: GO:0008873
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-gluconate + NADP+ = 2-dehydro-D-gluconate + NADPH + H+.","definition_xrefs":["EC:1.1.1.215"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gluconate dehydrogenase activity","termid":"GO:0008875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"gluconate 2-dehydrogenase activity","secondary_identifiers":["RHEA:16653","MetaCyc:1.1.1.215-RXN"],"synonyms":[{"name":"2-keto-D-gluconate reductase activity","type":"related"},{"name":"2-ketogluconate reductase activity","type":"related"}],"termid":"GO:0008873"}


id: PBO:0062017
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily L member 8","termid":"PBO:0062017"}


id: GO:0051948
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the directed movement of L-glutamate into a neuron or glial cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of L-glutamate import across plasma membrane","termid":"GO:0002037"},{"relation_name":"is_a","term_name":"negative regulation of amino acid uptake involved in synaptic transmission","termid":"GO:0051942"},{"relation_name":"is_a","term_name":"regulation of glutamate uptake involved in transmission of nerve impulse","termid":"GO:0051946"},{"relation_name":"negatively_regulates","term_name":"glutamate reuptake","termid":"GO:0051935"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0006810","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"negative regulation of glutamate uptake involved in transmission of nerve impulse","synonyms":[{"name":"down regulation of glutamate uptake during transmission of nerve impulse","type":"exact"},{"name":"down-regulation of glutamate uptake during transmission of nerve impulse","type":"exact"},{"name":"downregulation of glutamate uptake during transmission of nerve impulse","type":"exact"},{"name":"inhibition of glutamate uptake during transmission of nerve impulse","type":"narrow"},{"name":"negative regulation of glutamate reuptake","type":"exact"},{"name":"negative regulation of glutamate uptake during transmission of nerve impulse","type":"related"},{"name":"negative regulation of glutamate uptake involved in conduction of nerve impulse","type":"related"}],"termid":"GO:0051948"}


id: GO:0100015
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any transcription from RNA polymerase II promoter process that positively regulates inositol biosynthetic process.","definition_xrefs":["GOC:cjm","GOC:obol"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of inositol biosynthetic process by transcription from RNA polymerase II promoter (obsolete GO:0100015)","termid":"GO:0100015"}


id: PBO:0028304
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_phosphorylation_during_mitosis","termid":"PBO:0028304"}


id: GO:0042688
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a hemocyte precursor cell acquires the characteristics of a crystal cell, a class of cells that contain crystalline inclusions and are involved in the melanization of pathogenic material in the hemolymph.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hemocyte differentiation","termid":"GO:0042386"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"crystal cell differentiation","termid":"GO:0042688"}


id: PR:Q9P7D7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A bifunctional protein aas that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long-chain-fatty-acid--CoA ligase 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP4H10.11c","secondary_identifiers":["UniProtKB:Q9P7D7"],"synonyms":[{"name":"SPBP4H10.11c","type":"related"},{"name":"Spom972h-aas","type":"exact"},{"name":"fatty acid activator 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"long-chain acyl-CoA synthetase 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P7D7"}


id: GO:0051116
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + Co(2+) + H2O + hydrogenobyrinate a,c-diamide = ADP + cob(II)yrinate a,c diamide + 4 H+ + phosphate.","definition_xrefs":["EC:6.6.1.2","RHEA:15341"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligase activity, forming nitrogen-metal bonds, forming coordination complexes","termid":"GO:0051003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016874"],"is_obsolete":false,"name":"cobaltochelatase activity","secondary_identifiers":["MetaCyc:R342-RXN","KEGG_REACTION:R05227"],"synonyms":[{"name":"CobN-CobST","type":"related"},{"name":"CobNST","type":"narrow"},{"name":"hydrogenobyrinic acid a,c-diamide cobaltochelatase activity","type":"exact"},{"name":"hydrogenobyrinic-acid-a,c-diamide:cobalt cobalt-ligase (ADP-forming)","type":"related"}],"termid":"GO:0051116"}


id: PBO:0056716
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mesenchyme homeobox 1","termid":"PBO:0056716"}


id: PBO:0117088
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PPP3R1 and CNRIP1 antisense RNA 1","termid":"PBO:0117088"}


id: MONDO:0014502
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Mendelian susceptibility to mycobacterial diseases (MSMD) due to complete ISG15 deficiency is a genetic variant of MSMD characterized by Bacille Calmette-GuC)rin (BCG) infections.","definition_xrefs":["Orphanet:319563"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete type 1 interferonopathy (obsolete MONDO:0018782)","termid":"MONDO:0018782"},{"relation_name":"is_a","term_name":"inherited susceptibility to mycobacterial diseases","termid":"MONDO:0019146"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mendelian susceptibility to mycobacterial diseases due to complete ISG15 deficiency","secondary_identifiers":["UMLS:C4015293","MEDGEN:863730","DOID:0111934","OMIM:616126"],"synonyms":[{"name":"IMD38","type":"related"},{"name":"ISG15 autosomal recessive mendelian susceptibility to mycobacterial diseases due to a complete deficiency","type":"exact"},{"name":"ISG15 deficiency, autosomal recessive","type":"related"},{"name":"MSMD due to complete ISG15 deficiency","type":"exact"},{"name":"autosomal recessive mendelian susceptibility to mycobacterial diseases due to a complete deficiency caused by mutation in ISG15","type":"exact"},{"name":"immunodeficiency 38","type":"exact"},{"name":"immunodeficiency 38 with basal ganglia calcification","type":"related"},{"name":"immunodeficiency 38, Mycobacteriosis, autosomal recessive","type":"related"}],"termid":"MONDO:0014502","xrefs":{"Monarch":{"xref_id":"0014502"}}}


id: GO:0140442
data:
  {"annotated_genes":["SJAG_02183"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[95625],"is_not":false,"summary":null,"term":"GO:0140442"}]},"cv_name":"molecular_function","definition":"Binding to hydrogen peroxide (H2O2) and eliciting a change in the protein's activity in response to the intracellular level of that small molecule.","definition_xrefs":["PMID:20919928"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molecular sensor activity","termid":"GO:0140299"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02183":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140299"},{"rel_name":"is_a","termid":"GO:0098772"}],"interesting_parent_ids":["GO:0003674","GO:0098772","GO:0140299"],"is_obsolete":false,"name":"peroxide sensor activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0140442","terms_by_termid":{"GO:0140442":null}}


id: GO:0009001
data:
  {"annotated_genes":["SJAG_04305"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[76527],"is_not":false,"summary":null,"term":"GO:0009001"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: L-serine + acetyl-CoA = O-acetyl-L-serine + CoA.","definition_xrefs":["RHEA:24560"],"direct_ancestors":[{"relation_name":"is_a","term_name":"serine O-acyltransferase activity","termid":"GO:0016412"},{"relation_name":"is_a","term_name":"O-acetyltransferase activity","termid":"GO:0016413"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04305":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016746","GO:0003824"],"is_obsolete":false,"name":"serine O-acetyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:SERINE-O-ACETTRAN-RXN","EC:2.3.1.30","KEGG_REACTION:R00586"],"synonyms":[{"name":"L-serine acetyltransferase activity","type":"related"},{"name":"SATase activity","type":"related"},{"name":"acetyl-CoA:L-serine O-acetyltransferase activity","type":"related"},{"name":"serine acetyltransferase activity","type":"related"},{"name":"serine transacetylase activity","type":"related"}],"termid":"GO:0009001","terms_by_termid":{"GO:0009001":null}}


id: PBO:0088242
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol-polyphosphate 5-phosphatase, synaptojanin homolog 1","termid":"PBO:0088242"}


id: MONDO:0013404
data:
  {"annotated_genes":["SJAG_03556"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87279],"is_not":false,"summary":null,"term":"MONDO:0013404"}]},"cv_name":"mondo","definition":"Psychomotor retardation due to S-adenosylhomocysteine hydrolase deficiency is characterized by psychomotor delay and severe myopathy (hypotonia, absent tendon reflexes and delayed myelination) from birth, associated with hypermethioninaemia and elevated serum creatine kinase levels.","definition_xrefs":["Orphanet:88618"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"disorder of methionine catabolism","termid":"MONDO:0000351"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03556":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004736"],"is_obsolete":false,"name":"hypermethioninemia with deficiency of S-adenosylhomocysteine hydrolase","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0111039","OMIM:613752","MEDGEN:462408","SCTID:724039002","GARD:13177","UMLS:C3151058"],"synonyms":[{"name":"hypermethioninemia due to S-adenosylhomocysteine hydrolase deficiency","type":"exact"},{"name":"hypermethioninemia with S-adenosylhomocysteine hydrolase deficiency","type":"related"},{"name":"hypermethioninemia with deficiency of S-adenosylhomocysteine hydrolase","type":"exact"},{"name":"psychomotor retardation due to S-adenosylhomocysteine hydrolase deficiency","type":"exact"}],"termid":"MONDO:0013404","terms_by_termid":{"MONDO:0013404":null},"xrefs":{"Monarch":{"xref_id":"0013404"}}}


id: GO:0015046
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 reduced [rubredoxin] + NADP+ + H+ = 2 oxidized [rubredoxin] + NADPH.","definition_xrefs":["RHEA:13949"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rubredoxin-NAD(P)H reductase activity","termid":"GO:0015045"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"rubredoxin-NADP+ reductase activity","termid":"GO:0015046"}


id: GO:0032978
data:
  {"annotated_genes":["SJAG_01405","SJAG_03633","SJAG_05300","SJAG_01917","SJAG_05302"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[78869,74813,78659,78918,58362],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032979"}]},"cv_name":"biological_process","definition":"The process in which a protein is incorporated into a lipid bilayer, e.g., the prokaryotic, mitochondrial, or chloroplast inner membrane, from the inner side.","definition_xrefs":["PMID:15473843","PMID:14739936"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein insertion into membrane","termid":"GO:0051205"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01405":null,"SJAG_01917":null,"SJAG_03633":null,"SJAG_05300":null,"SJAG_05302":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0061024"],"is_obsolete":false,"name":"protein insertion into membrane from inner side","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null},"synonyms":[{"name":"insertion of proteins into membrane from the inner side","type":"exact"}],"termid":"GO:0032978","terms_by_termid":{"GO:0032979":null}}


id: PBO:0004282
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Bin3 family, transcriptional and translational regulator (predicted)","termid":"PBO:0004282"}


id: PBO:0078345
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Glu (CTC) 11-1","termid":"PBO:0078345"}


id: PBO:0061965
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily AE member 1","termid":"PBO:0061965"}


id: GO:0047065
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: O2 + 2 sulochrin = 2 (2R)-bisdechlorogeodin + 2 H2O.","definition_xrefs":["EC:1.21.3.5","RHEA:22616"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on X-H and Y-H to form an X-Y bond, with oxygen as acceptor","termid":"GO:0046993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"sulochrin oxidase [(-)-bisdechlorogeodin-forming] activity","secondary_identifiers":["KEGG_REACTION:R00061","MetaCyc:1.10.3.8-RXN"],"synonyms":[{"name":"sulochrin oxidase activity","type":"broad"},{"name":"sulochrin:oxygen oxidoreductase (cyclizing, (-)-specific)","type":"related"}],"termid":"GO:0047065"}


id: PBO:0062694
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 51 subfamily B member 5","termid":"PBO:0062694"}


id: PBO:0028869
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_snoRNA_level","termid":"PBO:0028869"}


id: MOD:01042
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes a adamantyl group for a hydrogen atom.","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adamantyl modified residue","synonyms":[{"name":"Ada","type":"exact"}],"termid":"MOD:01042"}


id: GO:0035487
data:
  {"annotated_genes":["SJAG_00634"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[98540],"is_not":false,"summary":null,"term":"GO:0035487"}]},"cv_name":"molecular_function","definition":"Binding to a double-stranded DNA region containing a T/T mispair.","definition_xrefs":["GOC:bf","GOC:jh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mismatched DNA binding","termid":"GO:0030983"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00634":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003677","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"thymine/thymine mispair binding","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"T/T mispair binding","type":"exact"}],"termid":"GO:0035487","terms_by_termid":{"GO:0035487":null}}


id: MONDO:0030314
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inflammatory bowel disease","termid":"MONDO:0005265"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0004335"],"is_obsolete":false,"name":"inflammatory bowel disease (infantile ulcerative colitis) 31, autosomal recessive","secondary_identifiers":["OMIM:619398","UMLS:C5444224","MEDGEN:1783277"],"synonyms":[{"name":"IBD31","type":"exact"},{"name":"inflammatory bowel disease (infantile ulcerative colitis) 31","type":"exact"},{"name":"inflammatory bowel disease (infantile ulcerative colitis) 31, autosomal recessive","type":"exact"},{"name":"inflammatory bowel disease, early-onset, autosomal recessive","type":"related"}],"termid":"MONDO:0030314","xrefs":{"Monarch":{"xref_id":"0030314"}}}


id: PBO:0087821
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TFIID subunit (48 kDa); involved in RNA polymerase II transcription initiation; potential Cdc28p substrate","termid":"PBO:0087821"}


id: SO:0001364
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"5_methylaminomethyluridine is a modified uridine base feature.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_uridine","termid":"SO:0001277"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"five_methylaminomethyluridine","secondary_identifiers":["RNAMOD:072"],"synonyms":[{"name":"5-methylaminomethyluridine","type":"exact"},{"name":"five methylaminomethyluridine","type":"exact"},{"name":"mnm5U","type":"exact"}],"termid":"SO:0001364"}


id: FYPO:0006705
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more pentose phosphates measured in a cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased level of substance in cell during vegetative growth","termid":"FYPO:0001329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased cellular pentose phosphate level","synonyms":[{"name":"decreased cellular pentose phosphate level during mitotic cell cycle","type":"related"},{"name":"decreased cellular pentose phosphate level during vegetative growth","type":"exact"},{"name":"decreased cellular pentose-phosphate level","type":"exact"},{"name":"decreased pentose phosphate accumulation","type":"related"},{"name":"reduced cellular pentose phosphate level","type":"exact"}],"termid":"FYPO:0006705"}


id: PBO:0060796
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit S5 pseudogene 2","termid":"PBO:0060796"}


id: MONDO:0020067
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An acute infectious process that affects the brain tissue. It is usually caused by viruses and less often by bacteria, parasites, and fungi.","definition_xrefs":["NCIT:C79550"],"direct_ancestors":[{"relation_name":"is_a","term_name":"encephalitis","termid":"MONDO:0019956"},{"relation_name":"is_a","term_name":"central nervous system infectious disorder","termid":"MONDO:0024619"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"infectious encephalitis","secondary_identifiers":["SCTID:312215006","ICD9:323.4","MEDGEN:108917","MESH:D000069544","UMLS:C0596773","ICD9:049.8"],"synonyms":[{"name":"encephalitis infection","type":"exact"}],"termid":"MONDO:0020067","xrefs":{"Monarch":{"xref_id":"0020067"}}}


id: PBO:0060390
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitotic spindle organizing protein 1","termid":"PBO:0060390"}


id: PBO:0081304
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 85","termid":"PBO:0081304"}


id: PBO:0067380
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 482, pseudogene","termid":"PBO:0067380"}


id: PBO:0044020
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"casein kinase 1 gamma 2 pseudogene 1","termid":"PBO:0044020"}


id: MONDO:0015801
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"coagulation protein disease","termid":"MONDO:0002242"},{"relation_name":"is_a","term_name":"hemorrhagic disease","termid":"MONDO:0002243"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"hemorrhagic disease due to alpha-1-antitrypsin Pittsburgh mutation","secondary_identifiers":["GARD:20148","icd11.foundation:59972355","MEDGEN:1675899","Orphanet:178396","UMLS:C5190706"],"termid":"MONDO:0015801","xrefs":{"Monarch":{"xref_id":"0015801"}}}


id: MONDO:0016803
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete unspecified inborn mitochondrial disorder (obsolete MONDO:0016803)","secondary_identifiers":["Orphanet:254837"],"synonyms":[{"name":"unspecified mitochondrial disorder","type":"exact"}],"termid":"MONDO:0016803","xrefs":{"Monarch":{"xref_id":"0016803"}}}


id: MONDO:0013195
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any hypertrophic cardiomyopathy in which the cause of the disease is a mutation in the TNNC1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial hypertrophic cardiomyopathy","termid":"MONDO:0024573"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"hypertrophic cardiomyopathy 13","secondary_identifiers":["DOID:0110319","MESH:C567686","OMIM:613243","MEDGEN:442487","UMLS:C2750472"],"synonyms":[{"name":"CMH13","type":"exact"},{"name":"TNNC1 hypertrophic cardiomyopathy","type":"exact"},{"name":"cardiomyopathy familial hypertrophic 13","type":"exact"},{"name":"cardiomyopathy, familial hypertrophic, 13","type":"related"},{"name":"cardiomyopathy, familial hypertrophic, type 13","type":"exact"},{"name":"cardiomyopathy, hypertrophic, 13","type":"exact"},{"name":"hypertrophic cardiomyopathy caused by mutation in TNNC1","type":"exact"},{"name":"hypertrophic cardiomyopathy type 13","type":"exact"}],"termid":"MONDO:0013195","xrefs":{"Monarch":{"xref_id":"0013195"}}}


id: GO:0042960
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of antimonite from one side of a membrane to the other, up its concentration gradient. The transporter binds the solute and undergoes a series of conformational changes. Transport works equally well in either direction and is driven by a chemiosmotic source of energy. Secondary active transporters include symporters and antiporters.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antimonite transmembrane transporter activity","termid":"GO:0015104"},{"relation_name":"is_a","term_name":"secondary active transmembrane transporter activity","termid":"GO:0015291"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"antimonite secondary active transmembrane transporter activity","synonyms":[{"name":"antimonite porter activity","type":"related"}],"termid":"GO:0042960"}


id: SO:0001402
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A post translationally modified selenocysteine amino acid feature.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified_amino_acid_feature","termid":"SO:0001385"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"modified_L_selenocysteine","secondary_identifiers":["MOD:01158"],"synonyms":[{"name":"modified L selenocysteine","type":"exact"},{"name":"modified L-selenocysteine","type":"exact"}],"termid":"SO:0001402"}


id: GO:0048664
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell becomes capable of differentiating autonomously into a neuron regardless of its environment; upon determination, the cell fate cannot be reversed.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate determination","termid":"GO:0001709"},{"relation_name":"part_of","term_name":"neuron fate commitment","termid":"GO:0048663"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuron fate determination","termid":"GO:0048664"}


id: PATO:0001259
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color consisting of purple color and low brightness.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purple","termid":"PATO:0000951"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dark purple","termid":"PATO:0001259"}


id: GO:0071056
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alpha9-beta1 integrin complex bound to the transmembrane metallopeptidase ADAM15.","definition_xrefs":["PMID:11882657"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005886","GO:0005575"],"is_obsolete":false,"name":"alpha9-beta1 integrin-ADAM15 complex","synonyms":[{"name":"ITGA9-ITGB1-ADAM15 complex","type":"narrow"}],"termid":"GO:0071056"}


id: FYPO:0005572
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the cell periphery is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization during vegetative growth","termid":"FYPO:0000644"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0001320","FYPO:0000138","FYPO:0001312"],"is_obsolete":false,"name":"normal protein localization to cell periphery","synonyms":[{"name":"normal protein localisation to cell periphery","type":"exact"},{"name":"normal protein localization to cell periphery during mitotic cell cycle","type":"related"},{"name":"normal protein localization to cell periphery during vegetative growth","type":"exact"}],"termid":"FYPO:0005572"}


id: MONDO:0009220
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"fatty liver disease","termid":"MONDO:0004790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0002515"],"is_obsolete":false,"name":"visceral steatosis, congenital","secondary_identifiers":["ICD9:571.8","MEDGEN:90962","SCTID:270881008","MESH:C536351","OMIM:228100","UMLS:C0341447"],"synonyms":[{"name":"White liver disease","type":"related"},{"name":"fatal neonatal hepatic steatosis","type":"related"},{"name":"fatty liver disease, congenital","type":"related"},{"name":"fatty metamorphosis of viscera","type":"related"},{"name":"steatosis of liver","type":"related"},{"name":"visceral steatosis","type":"related"},{"name":"visceral steatosis, congenital","type":"exact"}],"termid":"MONDO:0009220","xrefs":{"Monarch":{"xref_id":"0009220"}}}


id: PBO:0057427
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 549a","termid":"PBO:0057427"}


id: PBO:0034455
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_viability_following_cellular_response_to_UV_during_mitotic_S_phase","termid":"PBO:0034455"}


id: MONDO:1011778
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"digestive system disorder, non-human animal","termid":"MONDO:1011311"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chronic active hepatitis, non-human animal","secondary_identifiers":["OMIA:001093"],"termid":"MONDO:1011778","xrefs":{"Monarch":{"xref_id":"1011778"}}}


id: MONDO:0020798
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial hypoparathyroidism","termid":"MONDO:0016390"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"hypoparathyroidism, familial isolated, 2","secondary_identifiers":["OMIM:618883","GARD:18257","MEDGEN:1715177","UMLS:C5394383"],"synonyms":[{"name":"FIH2","type":"exact"},{"name":"hypoparathyroidism, familial isolated 2","type":"exact"},{"name":"hypoparathyroidism, familial isolated, 2","type":"exact"}],"termid":"MONDO:0020798","xrefs":{"Monarch":{"xref_id":"0020798"}}}


id: PBO:0052519
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kelch like family member 32","termid":"PBO:0052519"}


id: MONDO:0060549
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital anomalies of kidney and urinary tract syndrome with or without hearing loss, abnormal ears, or developmental delay","secondary_identifiers":["UMLS:C4539968","DOID:0112359","MEDGEN:1612119","OMIM:617641","Orphanet:656130"],"synonyms":[{"name":"CAKUTHED","type":"related"},{"name":"congenital anomalies of kidney and urinary tract syndrome with or without hearing loss, abnormal ears, or developmental delay","type":"exact"}],"termid":"MONDO:0060549","xrefs":{"Monarch":{"xref_id":"0060549"}}}


id: GO:0019948
data:
  {"annotated_genes":["SJAG_05032","SJAG_00604","SJAG_02082"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[75976,96570,98119],"is_not":false,"summary":null,"term":"GO:0019948"}]},"cv_name":"molecular_function","definition":"Catalysis of the activation of the proteolytically processed small ubiquitin-related modifier SUMO, through the formation of an ATP-dependent high-energy thiolester bond.","definition_xrefs":["GOC:rn","PMID:10187858","PMID:11265250"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ubiquitin-like modifier activating enzyme activity","termid":"GO:0008641"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00604":null,"SJAG_02082":null,"SJAG_05032":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016874","GO:0140096"],"is_obsolete":false,"name":"SUMO activating enzyme activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-2990833","Reactome:R-HSA-2993781","Reactome:R-HSA-2993784","GO:0017115"],"synonyms":[{"name":"SMT3 activating enzyme","type":"exact"},{"name":"SUMO E1 activator enzyme","type":"exact"}],"termid":"GO:0019948","terms_by_termid":{"GO:0019948":null}}


id: PBO:0060746
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit B1 pseudogene 2","termid":"PBO:0060746"}


id: MONDO:0014033
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autosomal dominant focal dystonia, DTY25 is a form of focal dystonia, characterized by cervical, laryngeal and hand-forearm dystonia.","definition_xrefs":["Orphanet:329466"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multifocal dystonia","termid":"MONDO:0000478"},{"relation_name":"is_a","term_name":"focal, segmental or multifocal dystonia","termid":"MONDO:0015990"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0003441"}],"interesting_parent_ids":["MONDO:0003441"],"is_obsolete":false,"name":"dystonia 25","secondary_identifiers":["GARD:10667","MEDGEN:930339","OMIM:615073","DOID:0090055","UMLS:C4304670"],"synonyms":[{"name":"DYT25","type":"related"},{"name":"GNAL dystonic disorder","type":"exact"},{"name":"autosomal dominant focal dystonia, DYT25 type","type":"related"},{"name":"dystonia 25","type":"exact"},{"name":"dystonia type 25","type":"exact"},{"name":"dystonic disorder caused by mutation in GNAL","type":"exact"}],"termid":"MONDO:0014033","xrefs":{"Monarch":{"xref_id":"0014033"}}}


id: GO:0044289
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Sites of close apposition of the inner and outer mitochondrial membrane.","definition_xrefs":["PMID:22009199"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle membrane contact site","termid":"GO:0044232"},{"relation_name":"part_of","term_name":"mitochondrial membrane","termid":"GO:0031966"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005739"}],"interesting_parent_ids":["GO:0005739","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"mitochondrial inner-outer membrane contact site","secondary_identifiers":["GO:0044285"],"synonyms":[{"name":"bridge contact site","type":"related"},{"name":"contact site","type":"broad"}],"termid":"GO:0044289"}


id: PBO:0069947
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1240, pseudogene","termid":"PBO:0069947"}


id: MONDO:0015632
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial oxidative phosphorylation disorder","termid":"MONDO:0016387"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0004069","MONDO:0005066"],"is_obsolete":false,"name":"FASTKD2-related infantile mitochondrial encephalomyopathy","secondary_identifiers":["icd11.foundation:356231901","MEDGEN:1665220","Orphanet:166105","GARD:17026","UMLS:C4755278"],"termid":"MONDO:0015632","xrefs":{"Monarch":{"xref_id":"0015632"}}}


id: PBO:0005281
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-specific DNA binding protein Spt2 (predicted)","termid":"PBO:0005281"}


id: MONDO:0016934
data:
  {"annotated_genes":["SJAG_01286"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87151],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011402"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndrome caused by partial chromosomal duplication","termid":"MONDO:0000762"},{"relation_name":"is_a","term_name":"chromosome 16 disorder","termid":"MONDO:0700023"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01286":null},"genotype_count":0,"is_obsolete":false,"name":"partial duplication of chromosome 16","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C4518504","GARD:20854","Orphanet:262672","SCTID:726355001","MEDGEN:1379206"],"synonyms":[{"name":"partial duplication of chromosome type 16","type":"exact"},{"name":"partial trisomy of chromosome 16","type":"exact"}],"termid":"MONDO:0016934","terms_by_termid":{"MONDO:0011402":null},"xrefs":{"Monarch":{"xref_id":"0016934"}}}


id: MONDO:1012024
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"peripheral axonopathy, non-human animal","termid":"MONDO:1011832"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peripheral axonopathy, domestic cat","secondary_identifiers":["OMIA:000099-9685"],"termid":"MONDO:1012024","xrefs":{"Monarch":{"xref_id":"1012024"}}}


id: GO:0090680
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The dissemination of mature viral particles from a host cell via the destabilization of the cell outer membrane.","definition_xrefs":["PMID:17900620"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral release from host cell by cytolysis","termid":"GO:0044659"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"viral release via disruption of host outer membrane","synonyms":[{"name":"disruption by virus of host outer membrane","type":"related"}],"termid":"GO:0090680"}


id: GO:0035174
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the transfer of a phosphate group to a serine residue of a histone.","definition_xrefs":["GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete histone serine kinase activity (obsolete GO:0035174)","synonyms":[{"name":"histone-serine kinase activity","type":"exact"}],"termid":"GO:0035174"}


id: GO:0061486
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of fructose from one side of a membrane to the other. In high-affinity transport the transporter is able to bind the solute even if it is only present at very low concentrations.","definition_xrefs":["GOC:dph","PMID:10735857"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fructose transmembrane transporter activity","termid":"GO:0005353"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"high-affinity fructose transmembrane transporter activity","synonyms":[{"name":"high affinity fructose transmembrane transporter activity","type":"exact"}],"termid":"GO:0061486"}


id: MONDO:0000721
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A metabolic metabolic disorder characterized by excess urinary excretion of the purine base xanthine.","direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic disease","termid":"MONDO:0005066"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"xanthinuria","secondary_identifiers":["SCTID:190919008","ICD9:277.2","MEDGEN:450997","NANDO:2200588","icd11.foundation:1565213608","UMLS:C0220988"],"termid":"MONDO:0000721","xrefs":{"Monarch":{"xref_id":"0000721"}}}


id: PBO:0090106
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"squalene cyclase-like protein","termid":"PBO:0090106"}


id: GO:0034792
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: hypophosphite + 2-oxoglutarate + O2 = succinate + phosphite + CO2.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete hypophosphite dioxygenase activity (obsolete GO:0034792)","termid":"GO:0034792"}


id: GO:0008937
data:
  {"annotated_genes":["SJAG_01063"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[110061],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008860"},{"annotations":[110062],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004324"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: reduced ferredoxin + NAD(P)+ = oxidized ferredoxin + NAD(P)H + H+.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on iron-sulfur proteins as donors, NAD or NADP as acceptor","termid":"GO:0016731"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01063":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"ferredoxin-[NAD(P)H] reductase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"ferredoxin reductase activity","type":"broad"}],"termid":"GO:0008937","terms_by_termid":{"GO:0004324":null,"GO:0008860":null}}


id: MOD:01704
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-methionine residue to dehydrobutyrine, by neutral loss of methyl sulfide.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-methionine residue","termid":"MOD:00913"},{"relation_name":"is_a","term_name":"dehydrobutyrine","termid":"MOD:01703"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dehydrobutyrine (Met)","synonyms":[{"name":"dHAbu(Met)","type":"exact"}],"termid":"MOD:01704"}


id: PBO:0076445
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TAFA chemokine like family member 1","termid":"PBO:0076445"}


id: MONDO:0024325
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A glomangiomyoma that involves the zone of skin.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skin glomus tumor","termid":"MONDO:0002295"},{"relation_name":"is_a","term_name":"glomangiomyoma","termid":"MONDO:0024323"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"cutaneous glomangiomyoma","secondary_identifiers":["MEDGEN:698513","ICD9:227.6","UMLS:C1275227","SCTID:403971002"],"synonyms":[{"name":"glomangiomyoma of skin","type":"exact"},{"name":"zone of skin glomangiomyoma","type":"exact"}],"termid":"MONDO:0024325","xrefs":{"Monarch":{"xref_id":"0024325"}}}


id: PR:O94376
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- srb7 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94376"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator of RNA polymerase II transcription subunit 21 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1604.10","synonyms":[{"name":"Spom972h-srb7","type":"exact"},{"name":"mediator complex subunit 21 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"suppressor of RNA polymerase B 7 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94376"}


id: GO:0042317
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of any antibiotic that contains the condensed beta-lactamthiazolidine ring system.","definition_xrefs":["GOC:jl","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta-lactam antibiotic catabolic process","termid":"GO:0030655"},{"relation_name":"is_a","term_name":"penicillin metabolic process","termid":"GO:0042316"},{"relation_name":"is_a","term_name":"sulfur compound catabolic process","termid":"GO:0044273"},{"relation_name":"is_a","term_name":"monocarboxylic acid catabolic process","termid":"GO:0072329"},{"relation_name":"is_a","term_name":"secondary metabolite catabolic process","termid":"GO:0090487"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006790","GO:0008150","GO:0019748","GO:0044281"],"is_obsolete":false,"name":"penicillin catabolic process","synonyms":[{"name":"penicillin breakdown","type":"exact"},{"name":"penicillin catabolism","type":"exact"},{"name":"penicillin degradation","type":"exact"}],"termid":"GO:0042317"}


id: GO:0009278
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A peptidoglycan polymer that forms the shape-determining structure of the cell all of Gram-negative bacteria.","definition_xrefs":["GOC:ma"],"gene_count":0,"genotype_count":0,"name":"obsolete murein sacculus (obsolete GO:0009278)","synonyms":[{"name":"murein sacculus","type":"exact"}],"termid":"GO:0009278"}


id: GO:0043852
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: monomethylamine + a monomethylamine corrinoid protein = a methylated monomethylamine corrinoid protein + NH3.","definition_xrefs":["PMID:9195968"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016741","GO:0016740"],"is_obsolete":false,"name":"monomethylamine methyltransferase activity","secondary_identifiers":["MetaCyc:RXN-8098","EC:2.1.1.248","RHEA:26059"],"synonyms":[{"name":"MMAMT","type":"related"},{"name":"MtmB","type":"related"},{"name":"monomethylamine:corrinoid methyltransferase activity","type":"exact"}],"termid":"GO:0043852"}


id: PBO:0068983
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 227, pseudogene","termid":"PBO:0068983"}


id: PBO:0081145
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZFP64 zinc finger protein","termid":"PBO:0081145"}


id: GO:0018209
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of peptidyl-serine.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-amino acid modification","termid":"GO:0018193"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-serine modification","termid":"GO:0018209"}


id: GO:0140404
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process mediated by a molecule secreted by a symbiont that results in the modulation (either activation or suppression) of a host innate immune response. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:21467214"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host innate immune response","termid":"GO:0052167"},{"relation_name":"is_a","term_name":"effector-mediated perturbation of host defenses by symbiont","termid":"GO:0140415"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"effector-mediated perturbation of host innate immune response by symbiont","synonyms":[{"name":"effector mediated modulation of host immune response by symbiont","type":"exact"},{"name":"effector triggered modulation of host immune response by symbiont","type":"exact"},{"name":"effector-dependent modulation of host immune response by symbiont","type":"exact"},{"name":"effector-mediated modulation of host immunity","type":"exact"},{"name":"effector-mediated modulation of host innate immune response by symbiont","type":"exact"},{"name":"effector-triggered modulation of host immune response by symbiont","type":"exact"}],"termid":"GO:0140404"}


id: MONDO:0018459
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Isolated glycerol kinase deficiency (GKD) is a very rare X-linked disorder of glycerol metabolism characterized biochemically by elevated plasma and urine glycerol levels, and clinically by variable neurometabolic manifestations, depending on the age of onset, and varying from a life-threatening childhood metabolic crisis to an asymptomatic adult form (infantile GKD, juvenile GKD, and adult GKD ).","definition_xrefs":["Orphanet:408"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inborn glycerol kinase deficiency","termid":"MONDO:0010613"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"isolated glycerol kinase deficiency","secondary_identifiers":["UMLS:C0574108","GARD:2807","MEDGEN:657821","icd11.foundation:542432712"],"synonyms":[{"name":"hyperglycerolemia","type":"exact"},{"name":"isolated inborn glycerol kinase deficiency","type":"exact"},{"name":"nonsyndromic glycerol kinase deficiency","type":"exact"},{"name":"nonsyndromic inborn glycerol kinase deficiency","type":"exact"}],"termid":"MONDO:0018459","xrefs":{"Monarch":{"xref_id":"0018459"}}}


id: PBO:0062470
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 161 pseudogene","termid":"PBO:0062470"}


id: GO:0005671
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A multiprotein complex that possesses histone acetyltransferase and is involved in regulation of transcription. Contains either GCN5 or PCAF in a mutually exclusive manner. The budding yeast complex includes Gcn5p, two proteins of the Ada family, and two TBP-associate proteins (TAFs); analogous complexes in other species have analogous compositions, and usually contain homologs of the yeast proteins. Both ATAC- or SAGA (see GO:0000124, SAGA complex) are involved in the acetylation of histone H3K9 and K14 residues.","definition_xrefs":["PMID:10637607"],"gene_count":0,"genotype_count":0,"name":"obsolete Ada2/Gcn5/Ada3 transcription activator complex (obsolete GO:0005671)","synonyms":[{"name":"ATAC complex","type":"related"}],"termid":"GO:0005671"}


id: GO:1904819
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a parietal peritoneum over time, from its formation to the mature structure.","definition_xrefs":["GOC:dph","PMID:15840053","GO_REF:0000094","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"peritoneum development","termid":"GO:1904820"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"parietal peritoneum development","synonyms":[{"name":"peritoneal cavity lining development","type":"exact"}],"termid":"GO:1904819"}


id: GO:0044451
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Any constituent part of the nucleoplasm, that part of the nuclear content other than the chromosomes or the nucleolus.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete nucleoplasm part (obsolete GO:0044451)","termid":"GO:0044451"}


id: SO:0000664
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of a chromosome that has been introduced by backcrossing with a separate species.","definition_xrefs":["PMID:11454782"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome_part","termid":"SO:0000830"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"introgressed_chromosome_region","synonyms":[{"name":"introgressed chromosome region","type":"exact"}],"termid":"SO:0000664"}


id: MONDO:0014091
data:
  {"annotated_genes":["SJAG_02564"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85479],"is_not":false,"summary":null,"term":"MONDO:0014091"}]},"cv_name":"mondo","definition":"Any mitochondrial complex deficiency in which the cause of the disease is a mutation in the ATP5F1A gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial complex deficiency","termid":"MONDO:0000066"},{"relation_name":"is_a","term_name":"mitochondrial proton-transporting ATP synthase complex deficiency","termid":"MONDO:0014471"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02564":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004069"],"is_obsolete":false,"name":"mitochondrial complex V (ATP synthase) deficiency nuclear type 4B","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0070462","GARD:18667","MEDGEN:815229","OMIM:615228","UMLS:C3808899"],"synonyms":[{"name":"ATP5F1A mitochondrial complex deficiency","type":"exact"},{"name":"MC5DN4B","type":"exact"},{"name":"mitochondrial Complex 5 (ATP synthase) deficiency, ATP5A1 type","type":"related"},{"name":"mitochondrial Complex 5 (ATP synthase) deficiency, nuclear type 4","type":"related"},{"name":"mitochondrial complex V (ATP synthase) deficiency, nuclear type 4","type":"related"},{"name":"mitochondrial complex deficiency caused by mutation in ATP5F1A","type":"exact"}],"termid":"MONDO:0014091","terms_by_termid":{"MONDO:0014091":null},"xrefs":{"Monarch":{"xref_id":"0014091"}}}


id: PBO:0062905
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oxidative stress responsive kinase 1","termid":"PBO:0062905"}


id: PBO:0082754
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the septin ring, required for cytokinesis; septins are GTP-binding proteins that assemble into rod-like hetero-oligomers that can associate to form filaments; septin rings at the mother-bud neck act as scaffolds for recruiting cell division factors and as barriers to prevent diffusion of specific proteins between mother and daughter cells; N-terminus interacts with phosphatidylinositol-4,5-bisphosphate; protein abundance increases under DNA damage stress","termid":"PBO:0082754"}


id: PBO:0058965
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"makorin ring finger protein 8, pseudogene","termid":"PBO:0058965"}


id: GO:0047354
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: CDP-choline + sphingosine = CMP + H+ + sphingosyl-phosphocholine.","definition_xrefs":["RHEA:21224","EC:2.7.8.10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, for other substituted phosphate groups","termid":"GO:0016780"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016780"}],"interesting_parent_ids":["GO:0016780","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"sphingosine cholinephosphotransferase activity","secondary_identifiers":["MetaCyc:2.7.8.10-RXN","KEGG_REACTION:R01929"],"synonyms":[{"name":"CDP-choline-sphingosine cholinephosphotransferase activity","type":"related"},{"name":"CDP-choline:sphingosine cholinephosphotransferase activity","type":"related"},{"name":"cytidine diphosphocholine-sphingosine cholinephosphotransferase activity","type":"related"},{"name":"phosphorylcholine-sphingosine transferase activity","type":"related"},{"name":"sphingosine choline phosphotransferase activity","type":"exact"}],"termid":"GO:0047354"}


id: PBO:0110061
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nifs homolog, possible cysteine desulfurase, implicated in iron-sulfur cluster assembly","termid":"PBO:0110061"}


id: GO:0000291
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of the transcript body of a nuclear-transcribed mRNA that occurs when the ends are not protected by the 5'-cap or the 3'-poly(A) tail.","definition_xrefs":["GOC:krc"],"gene_count":0,"genotype_count":0,"name":"obsolete nuclear-transcribed mRNA catabolic process, exonucleolytic (obsolete GO:0000291)","synonyms":[{"name":"exonucleolytic degradation of mRNA","type":"exact"},{"name":"mRNA breakdown, exonucleolytic","type":"exact"},{"name":"mRNA degradation, exonucleolytic","type":"exact"},{"name":"nuclear mRNA catabolic process, exonucleolytic","type":"exact"}],"termid":"GO:0000291"}


id: MONDO:0044996
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease or disorder that involves the cerebral cortex.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"brain disorder","termid":"MONDO:0005560"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cerebral cortex disorder","secondary_identifiers":["MEDGEN:688117","UMLS:C1263847","SCTID:128128003"],"synonyms":[{"name":"cerebral cortex disease","type":"exact"},{"name":"cerebral cortex disease or disorder","type":"exact"},{"name":"disease of cerebral cortex","type":"exact"},{"name":"disease or disorder of cerebral cortex","type":"exact"},{"name":"disorder of cerebral cortex","type":"exact"}],"termid":"MONDO:0044996","xrefs":{"Monarch":{"xref_id":"0044996"}}}


id: MONDO:0019100
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare inflammatory disease of the central nervous system characterized mainly by attacks of uni- or bilateral optic neuritis (ON) and acute myelitis.","definition_xrefs":["Orphanet:71211"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"multiple sclerosis","termid":"MONDO:0005301"},{"relation_name":"excluded_subClassOf","term_name":"obsolete multiple sclerosis variant (obsolete MONDO:0016428)","termid":"MONDO:0016428"},{"relation_name":"is_a","term_name":"nervous system disorder","termid":"MONDO:0005071"},{"relation_name":"is_a","term_name":"autoimmune/inflammatory optic neuropathy","termid":"MONDO:0044685"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"neuromyelitis optica","secondary_identifiers":["SCTID:25044007","EFO:0004256","ICD9:341.0","MEDGEN:45063","NANDO:2201322","icd11.foundation:744293382","NCIT:C84934","NORD:1505","NANDO:1200027","GARD:6267","UMLS:C0027873","DOID:8869","MedDRA:10029322","MESH:D009471"],"synonyms":[{"name":"Devic disease","type":"exact"},{"name":"Devic syndrome","type":"related"},{"name":"Devic's disease","type":"exact"},{"name":"Devic's neuromyelitis optica","type":"related"},{"name":"Devic's syndrome","type":"exact"},{"name":"NMO","type":"related"},{"name":"Neuromyelitis Optica Spectrum Disorder","type":"exact"}],"termid":"MONDO:0019100","xrefs":{"Monarch":{"xref_id":"0019100"}}}


id: GO:0098774
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A proteinaceous extracellular fiber, produced by an enteric bacterium, that is involved in surface and cell-cell contacts that promote community behavior and host colonization.","definition_xrefs":["PMID:16704339"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pilus","termid":"GO:0009289"},{"relation_name":"part_of","term_name":"bacterial biofilm matrix","termid":"GO:0097311"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"curli","synonyms":[{"name":"tafi","type":"narrow"},{"name":"thin aggregative fimbrae","type":"narrow"}],"termid":"GO:0098774"}


id: MONDO:0003988
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare lymphoma that arises from the bone or soft tissue of the sternum.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sternum cancer","termid":"MONDO:0003273"},{"relation_name":"is_a","term_name":"primary bone lymphoma","termid":"MONDO:0017814"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0004992"],"is_obsolete":false,"name":"sternum lymphoma","secondary_identifiers":["DOID:6762","MEDGEN:277770","NCIT:C6716","UMLS:C1336504"],"synonyms":[{"name":"lymphoma of sternum","type":"exact"},{"name":"lymphoma of the sternum","type":"exact"},{"name":"primary sternal lymphoma","type":"exact"},{"name":"sternal lymphoma","type":"exact"},{"name":"sternum lymphoma","type":"exact"}],"termid":"MONDO:0003988","xrefs":{"Monarch":{"xref_id":"0003988"}}}


id: FYPO:0002856
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of glutathione synthase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"},{"relation_name":"is_a","term_name":"abnormal metabolic process","termid":"FYPO:0000860"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000661","FYPO:0000707","FYPO:0000654","FYPO:0005447","FYPO:0000652","FYPO:0001985"],"is_obsolete":false,"name":"abnormal glutathione synthase activity","synonyms":[{"name":"abnormal GSH synthase activity","type":"exact"},{"name":"abnormal glutathione synthetase activity","type":"exact"}],"termid":"FYPO:0002856"}


id: GO:0045281
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A multimeric complex which consists of flavoprotein (subunit A ; InterPro:IPR003952), iron-sulfur protein (subunit B) and membrane-bound cytochrome b560 (subunit C; InterPro:IPR000701). In some Archaea, the membrane-bound subunits (C or C and D) do not necessarily contain heme. Membrane-bound subunits can bind or react with quinones.","definition_xrefs":["InterPro:IPR000701","GOC:kd"],"gene_count":0,"genotype_count":0,"name":"obsolete succinate dehydrogenase complex (obsolete GO:0045281)","termid":"GO:0045281"}


id: PBO:0029135
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_prospore_formation","termid":"PBO:0029135"}


id: PBO:0029801
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-misoriented_actin_cables","termid":"PBO:0029801"}


id: MONDO:0020044
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive cerebellar ataxia","termid":"MONDO:0015244"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005559"],"is_obsolete":false,"name":"autosomal recessive metabolic cerebellar ataxia","secondary_identifiers":["UMLS:C5681517","GARD:19413","MEDGEN:1842756","Orphanet:98096"],"termid":"MONDO:0020044","xrefs":{"Monarch":{"xref_id":"0020044"}}}


id: PBO:0028078
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-multiple_mitotic_spindles_with_abolished_sister_chromatid_separation","termid":"PBO:0028078"}


id: PBO:0066885
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 185","termid":"PBO:0066885"}


id: GO:0061931
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of erythrocyte enucleation.","definition_xrefs":["PMID:25241935"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular component organization","termid":"GO:0051130"},{"relation_name":"is_a","term_name":"regulation of erythrocyte enucleation","termid":"GO:0061930"},{"relation_name":"positively_regulates","term_name":"erythrocyte enucleation","termid":"GO:0043131"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of erythrocyte enucleation","termid":"GO:0061931"}


id: GO:1903240
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of positive regulation of the force of heart contraction by chemical signal.","definition_xrefs":["GO_REF:0000058","GOC:BHF","GOC:rl","GOC:TermGenie","PMID:17242280"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of positive regulation of the force of heart contraction by chemical signal (obsolete GO:1903240)","synonyms":[{"name":"down regulation of positive regulation of the force of heart contraction by chemical signal","type":"exact"},{"name":"down regulation of positive regulation of the force of heart muscle contraction by chemical signal","type":"exact"},{"name":"down-regulation of positive regulation of the force of heart contraction by chemical signal","type":"exact"},{"name":"down-regulation of positive regulation of the force of heart muscle contraction by chemical signal","type":"exact"},{"name":"downregulation of positive regulation of the force of heart contraction by chemical signal","type":"exact"},{"name":"downregulation of positive regulation of the force of heart muscle contraction by chemical signal","type":"exact"},{"name":"inhibition of positive regulation of the force of heart contraction by chemical signal","type":"narrow"},{"name":"inhibition of positive regulation of the force of heart muscle contraction by chemical signal","type":"narrow"},{"name":"negative regulation of positive regulation of the force of heart contraction by chemical signal","type":"exact"},{"name":"negative regulation of positive regulation of the force of heart muscle contraction by chemical signal","type":"exact"}],"termid":"GO:1903240"}


id: PBO:0017408
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-improper_part_of","termid":"PBO:0017408"}


id: PATO:0000190
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000190 gait (obsolete PATO:0000190)","termid":"PATO:0000190"}


id: GO:0043077
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The activation of the chemical reactions and pathways resulting in the breakdown of acetate.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of acetate catabolic process","termid":"GO:0045754"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"initiation of acetate catabolic process","synonyms":[{"name":"initiation of acetate breakdown","type":"exact"},{"name":"initiation of acetate catabolism","type":"exact"},{"name":"initiation of acetate degradation","type":"exact"}],"termid":"GO:0043077"}


id: GO:2001177
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of mediator complex assembly.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein-containing complex assembly","termid":"GO:0031333"},{"relation_name":"is_a","term_name":"regulation of mediator complex assembly","termid":"GO:2001176"},{"relation_name":"negatively_regulates","term_name":"mediator complex assembly","termid":"GO:0036034"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0065003"],"is_obsolete":false,"name":"negative regulation of mediator complex assembly","termid":"GO:2001177"}


id: PBO:0060637
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NCMAP divergent transcript","termid":"PBO:0060637"}


id: PBO:0063719
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyroglutamyl-peptidase I","termid":"PBO:0063719"}


id: GO:0045980
data:
  {"annotated_genes":["SJAG_00685","SJAG_05314","SJAG_04422"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[73435,76398],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045820"},{"annotations":[118386],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905707"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways involving nucleotides.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of nucleotide metabolic process","termid":"GO:0006140"},{"relation_name":"is_a","term_name":"negative regulation of nucleobase-containing compound metabolic process","termid":"GO:0045934"},{"relation_name":"is_a","term_name":"negative regulation of phosphate metabolic process","termid":"GO:0045936"},{"relation_name":"is_a","term_name":"negative regulation of small molecule metabolic process","termid":"GO:0062014"},{"relation_name":"negatively_regulates","term_name":"nucleotide metabolic process","termid":"GO:0009117"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00685":null,"SJAG_04422":null,"SJAG_05314":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0055086"},{"rel_name":"negatively_regulates","termid":"GO:0055086"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"negative regulation of nucleotide metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of nucleotide metabolic process","type":"exact"},{"name":"down-regulation of nucleotide metabolic process","type":"exact"},{"name":"downregulation of nucleotide metabolic process","type":"exact"},{"name":"inhibition of nucleotide metabolic process","type":"narrow"},{"name":"negative regulation of nucleotide metabolism","type":"exact"}],"termid":"GO:0045980","terms_by_termid":{"GO:0045820":null,"GO:1905707":null}}


id: PBO:0087104
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal protein lysine methyltransferase; responsible for trimethylation of the lysine residue at position 3 of Rpl12Ap and Rpl12Bp","termid":"PBO:0087104"}


id: PBO:0084451
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mannose-containing glycoprotein constituent of the cell wall; member of the PIR (proteins with internal repeats) family","termid":"PBO:0084451"}


id: GO:0055094
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a lipoprotein particle stimulus.","definition_xrefs":["GOC:rl","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to endogenous stimulus","termid":"GO:0009719"},{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to lipoprotein particle","synonyms":[{"name":"response to lipoprotein particle stimulus","type":"exact"}],"termid":"GO:0055094"}


id: PBO:0049172
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycosaminoglycan regulatory associated long non-coding RNA","termid":"PBO:0049172"}


id: GO:0044282
data:
  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id: PBO:0056009
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id: PBO:0075272
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id: GO:0006910
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id: GO:0032873
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id: PBO:0045632
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id: FYPO:0007776
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id: MONDO:0003754
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id: GO:0032271
data:
  {"annotated_genes":["SJAG_02566","SJAG_01993","SJAG_00279","SJAG_03086","SJAG_02700","SJAG_04100","SJAG_00521","SJAG_01894","SJAG_04479"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[76079,92689,80571,79537],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051016"},{"annotations":[79796,68484,67351,76991,77659],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030833"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the process of creating protein polymers.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein-containing complex assembly","termid":"GO:0043254"},{"relation_name":"regulates","term_name":"protein polymerization","termid":"GO:0051258"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00279":null,"SJAG_00521":null,"SJAG_01894":null,"SJAG_01993":null,"SJAG_02566":null,"SJAG_02700":null,"SJAG_03086":null,"SJAG_04100":null,"SJAG_04479":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0065003"],"is_obsolete":false,"name":"regulation of protein polymerization","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"regulation of protein polymerisation","type":"exact"}],"termid":"GO:0032271","terms_by_termid":{"GO:0030833":null,"GO:0051016":null}}


id: GO:0034573
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: didemethylisoproturon + H2O = carbamic acid + 4-isopropylaniline.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete didemethylisoproturon amidohydrolase activity (obsolete GO:0034573)","termid":"GO:0034573"}


id: PBO:0067961
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 263","termid":"PBO:0067961"}


id: PBO:0002659
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Tel2/Rad-5/Clk-2 family protein Tel2","termid":"PBO:0002659"}


id: PBO:0079342
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis-specific transcript, Y-linked 26, pseudogene","termid":"PBO:0079342"}


id: GO:0045028
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a purine nucleotide and transmitting the signal across the membrane by activating an associated G-protein; promotes the exchange of GDP for GTP on the alpha subunit of a heterotrimeric G-protein complex.","definition_xrefs":["GOC:mah","PMID:9755289"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purinergic nucleotide receptor activity","termid":"GO:0001614"},{"relation_name":"is_a","term_name":"G protein-coupled receptor activity","termid":"GO:0004930"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"G protein-coupled purinergic nucleotide receptor activity","synonyms":[{"name":"G protein coupled purinergic nucleotide receptor activity","type":"exact"},{"name":"G-protein coupled purinergic nucleotide receptor activity","type":"exact"},{"name":"P2Y","type":"related"},{"name":"P2Y receptor","type":"related"},{"name":"purinergic nucleotide receptor activity, G protein coupled","type":"exact"},{"name":"purinergic nucleotide receptor activity, G-protein coupled","type":"exact"}],"termid":"GO:0045028"}


id: MONDO:0000731
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete peeling skin syndrome (obsolete MONDO:0000731)","termid":"MONDO:0000731","xrefs":{"Monarch":{"xref_id":"0000731"}}}


id: PBO:0057096
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 192","termid":"PBO:0057096"}


id: MONDO:0013480
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial primary hypomagnesemia with normocalciuria and normocalcemia","termid":"MONDO:0018101"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005240"],"is_obsolete":false,"name":"renal hypomagnesemia 6","secondary_identifiers":["DOID:0060884","GARD:12155","MEDGEN:462645","OMIM:613882","UMLS:C3151295"],"synonyms":[{"name":"HOMG6","type":"exact"},{"name":"hypomagnesemia 6, renal","type":"related"},{"name":"renal hypomagnesemia type 6","type":"exact"},{"name":"renal hypomagnesemia-6","type":"related"}],"termid":"MONDO:0013480","xrefs":{"Monarch":{"xref_id":"0013480"}}}


id: GO:0034738
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acyl-CoA + lanosterol = CoA + lanosterol ester.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sterol O-acyltransferase activity","termid":"GO:0004772"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016746","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"lanosterol O-acyltransferase activity","termid":"GO:0034738"}


id: PBO:0016899
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microtubule binding protein Mcp1","termid":"PBO:0016899"}


id: GO:0010826
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of centrosome duplication. Centrosome duplication is the replication of a centrosome, a structure comprised of a pair of centrioles and peri-centriolar material from which a microtubule spindle apparatus is organized.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of centrosome duplication","termid":"GO:0010824"},{"relation_name":"is_a","term_name":"negative regulation of centrosome cycle","termid":"GO:0046606"},{"relation_name":"negatively_regulates","term_name":"centrosome duplication","termid":"GO:0051298"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"negatively_regulates","termid":"GO:0007010"},{"rel_name":"negatively_regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007010","GO:0008150","GO:0007049"],"is_obsolete":false,"name":"negative regulation of centrosome duplication","termid":"GO:0010826"}


id: PBO:0090578
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER-vacuole tethering sorting nexin Snx12","termid":"PBO:0090578"}


id: SOFP:element
data:
  {"annotation_feature_type":"gene","cv_name":"feature_property","definition":"name of transposable element class","direct_ancestors":[{"relation_name":"is_a","term_name":"feature_property","termid":"SOFP:feature_property"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"element","termid":"SOFP:element"}


id: PBO:0027392
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_phospholipid:diacylglycerol_acyltransferase_activity","termid":"PBO:0027392"}


id: FYPO:0004896
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more generation of precursor metabolites and energy RNAs measured in a cell is higher than normal (i.e. higher than observed in wild-type cells). Generation of precursor metabolites and energy RNAs are transcribed from genes whose products are involved in the formation of precursor metabolites and the liberation of energy from these substances.","definition_xrefs":["PomBase:mah","GO:0006091","PMID:25102102"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA level during vegetative growth","termid":"FYPO:0000825"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0006551"],"is_obsolete":false,"name":"increased level of generation of precursor metabolites and energy gene mRNA during vegetative growth","synonyms":[{"name":"increased generation of precursor metabolites and energy RNA accumulation during vegetative growth","type":"related"},{"name":"increased level of generation of precursor metabolites and energy RNA during mitotic cell cycle","type":"related"},{"name":"increased level of generation of precursor metabolites and energy gene RNA during vegetative growth","type":"exact"},{"name":"increased level of generation of precursor metabolites and energy transcripts during vegetative growth","type":"exact"}],"termid":"FYPO:0004896"}


id: GO:0005786
data:
  {"annotated_genes":["SJAG_01759","SJAG_03684","SJAG_02456","SJAG_03411","SJAG_01282","SJAG_01840"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[56982,62788,72827,73366,75792,91190],"is_not":false,"summary":null,"term":"GO:0005786"}]},"cv_name":"cellular_component","definition":"A ribonucleoprotein particle of 325 kDa composed of a 7S (300 nucleotide) RNA molecule and a complex of six different polypeptides. This binds both to the N-terminal signal peptide for proteins destined for the endoplasmic reticulum as they emerge from the large ribosomal subunit and also to the ribosome. This binding arrests further translation thereby preventing the proteins from being released into the cytosol. The SRP-ribosome complex then diffuses to the endoplasmic reticulum where it is bound to the signal recognition particle receptor, which allows resumption of protein synthesis and facilitates the passage of the growing polypeptide chain through the translocon. Through a process involving GTP hydrolysis, the SRP-SRP receptor complex dissociates and SRP returns to the cytosol. Of the six polypeptides of SRP the 54 kDa subunit (SRP54) is the central player. It contains an N-terminal GTPase domain and a C-terminal domain that binds directly to the signal peptide and the SRP RNA. Examples of this component are found in Mus musculus, Saccharomyces cerevisiae and Arabidopsis thaliana.","definition_xrefs":["GOC:mtg_sensu","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signal recognition particle","termid":"GO:0048500"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01282":null,"SJAG_01759":null,"SJAG_01840":null,"SJAG_02456":null,"SJAG_03411":null,"SJAG_03684":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"signal recognition particle, endoplasmic reticulum targeting","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000043":null,"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:Signal_recognition_particle","GO:0005855"],"synonyms":[{"name":"SRP","type":"exact"},{"name":"signal sequence receptor complex","type":"exact"}],"termid":"GO:0005786","terms_by_termid":{"GO:0005786":null}}


id: GO:0060981
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of a cell from one site to another that will contribute to the formation of new blood vessels in the heart from pre-existing blood vessels.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell migration involved in heart development","termid":"GO:0060973"},{"relation_name":"part_of","term_name":"angiogenesis involved in coronary vascular morphogenesis","termid":"GO:0060978"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell migration involved in coronary angiogenesis","termid":"GO:0060981"}


id: FYPO:0006990
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which heterochromatin is assembled over a larger portion of the chromosome than normal in regions containing protein-coding genes.","definition_xrefs":["GO:0031509","PMID:26518661","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased spatial extent of heterochromatin assembly","termid":"FYPO:0007953"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0000641","FYPO:0001985"],"is_obsolete":false,"name":"increased spatial extent of heterochromatin assembly at protein coding gene","synonyms":[{"name":"heterochromatin spreading at protein coding gene","type":"related"},{"name":"increased spatial extent of heterochromatin assembly at protein coding gene during mitotic cell cycle","type":"related"},{"name":"increased spatial extent of heterochromatin assembly at protein coding gene during vegetative growth","type":"exact"},{"name":"increased spatial extent of heterochromatin formation at protein coding gene","type":"exact"}],"termid":"FYPO:0006990"}


id: MONDO:0958265
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"scleritis","termid":"MONDO:0001718"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"idiopathic scleritis","secondary_identifiers":["UMLS:C5816747","Orphanet:648675","MEDGEN:1853157"],"termid":"MONDO:0958265","xrefs":{"Monarch":{"xref_id":"0958265"}}}


id: MOD:01907
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-methioninium (protonated L-methionine) residue to dehydromethionine.","definition_xrefs":["PubMed:18688235","PubMed:19775156"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"protonated L-methionine (L-methioninium) residue","termid":"MOD:01464"},{"relation_name":"is_a","term_name":"cyclized residue","termid":"MOD:00601"},{"relation_name":"is_a","term_name":"modified L-methionine residue","termid":"MOD:00913"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dehydromethionine (from L-methioninium)","synonyms":[{"name":"(3S)-3-carboxy-1-methylisothiazolidin-1-ium","type":"exact"},{"name":"L-dehydromethionine","type":"exact"}],"termid":"MOD:01907"}


id: MONDO:0957271
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autoinflammatory syndrome","termid":"MONDO:0019751"},{"relation_name":"is_a","term_name":"hereditary disorder of connective tissue","termid":"MONDO:0023603"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autoinflammatory disease, systemic, with vasculitis","secondary_identifiers":["MEDGEN:1841161","OMIM:620376","UMLS:C5830525"],"termid":"MONDO:0957271","xrefs":{"Monarch":{"xref_id":"0957271"}}}


id: PBO:0085046
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Non-essential nuclear protein; null mutation has global effects on transcription; VHR2 has a paralog, VHR1, that arose from the whole genome duplication; relative distribution to the nucleus increases upon DNA replication stress","termid":"PBO:0085046"}


id: FYPO:0001263
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell is branched and septated, and longer than normal, during a cellular hyperosmotic response.","definition_xrefs":["PomBase:jh","PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete branched, elongated cell during cellular hyperosmotic response (obsolete FYPO:0001263)","synonyms":[{"name":"branched, elongated cell during cellular hyperosmotic response during mitotic cell cycle","type":"related"},{"name":"branched, elongated cell during cellular hyperosmotic response during vegetative growth","type":"exact"},{"name":"branched, elongated, septated cell during cellular hyperosmotic response","type":"exact"}],"termid":"FYPO:0001263"}


id: GO:0047939
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-gulonate + NADP+ = D-glucuronate + H+ + NADPH.","definition_xrefs":["RHEA:14909","EC:1.1.1.19"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"L-glucuronate reductase activity","secondary_identifiers":["MetaCyc:GLUCURONATE-REDUCTASE-RXN","Reactome:R-HSA-5661256","KEGG_REACTION:R01481"],"synonyms":[{"name":"D-glucuronate dehydrogenase activity","type":"related"},{"name":"D-glucuronate reductase activity","type":"narrow"},{"name":"NADP-L-gulonate dehydrogenase activity","type":"related"},{"name":"TPN-L-gulonate dehydrogenase activity","type":"related"},{"name":"aldehyde reductase II activity","type":"related"},{"name":"glucuronate dehydrogenase activity","type":"related"},{"name":"glucuronate reductase activity","type":"exact"}],"termid":"GO:0047939"}


id: FYPO:0000820
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which the concentration of a peptide pheromone released into the growth medium by cells is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased concentration of substance in growth medium","termid":"FYPO:0000816"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001155"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001155"],"is_obsolete":false,"name":"decreased concentration of pheromone in growth medium","synonyms":[{"name":"decreased accumulation of pheromone in growth medium","type":"related"},{"name":"decreased concentration of peptide pheromone in growth medium","type":"exact"},{"name":"decreased level of pheromone in growth medium","type":"exact"},{"name":"decreased release of pheromone into growth medium","type":"related"},{"name":"pheromone production: decreased","type":"related"},{"name":"reduced concentration of pheromone in growth medium","type":"exact"}],"termid":"FYPO:0000820"}


id: PBO:0036328
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eRF1 methyltransferase Mtq2 (predicted)","termid":"PBO:0036328"}


id: GO:0042818
data:
  {"annotated_genes":["SJAG_00707","SJAG_01881"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88081],"is_not":false,"summary":null,"term":"GO:0042818"},{"annotations":[112208],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010144"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving 4-(aminomethyl)-5-(hydroxymethyl)-2-methylpyridin-3-ol, one of the vitamin B6 compounds. Pyridoxal, pyridoxamine and pyridoxine are collectively known as vitamin B6, and are efficiently converted to the biologically active form of vitamin B6, pyridoxal phosphate.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vitamin B6 metabolic process","termid":"GO:0042816"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00707":null,"SJAG_01881":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006766"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0006766","GO:0044281"],"is_obsolete":false,"name":"pyridoxamine metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"pyridoxamine metabolism","type":"exact"}],"termid":"GO:0042818","terms_by_termid":{"GO:0010144":null,"GO:0042818":null}}


id: PBO:0080069
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 34","termid":"PBO:0080069"}


id: PBO:0055065
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2481","termid":"PBO:0055065"}


id: PBO:0079900
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquinol-cytochrome c reductase, complex III subunit XI","termid":"PBO:0079900"}


id: PR:O74990
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A conserved oligomeric Golgi complex subunit 4 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04646","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved oligomeric Golgi complex subunit 4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC338.13","secondary_identifiers":["UniProtKB:O74990"],"synonyms":[{"name":"COG complex subunit 4 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-COG4","type":"exact"},{"name":"component of oligomeric Golgi complex 4 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74990"}


id: MONDO:0022323
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"allergic contact dermatitis","termid":"MONDO:0006525"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005093"],"is_obsolete":false,"name":"2-hydroxyethyl methacrylate sensitization","secondary_identifiers":["MEDGEN:443922","UMLS:C2930873","MESH:C535305"],"synonyms":[{"name":"2-HEMA sensitization","type":"related"},{"name":"sensitization to 2-hydroxyethyl methacrylate","type":"related"}],"termid":"MONDO:0022323","xrefs":{"Monarch":{"xref_id":"0022323"}}}


id: GO:0019825
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to oxygen (O2).","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small molecule binding","termid":"GO:0036094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"oxygen binding","synonyms":[{"name":"cytochrome P450","type":"narrow"},{"name":"cytochrome P450 activity","type":"related"}],"termid":"GO:0019825"}


id: PBO:0043118
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytosolic iron-sulfur assembly component 2B","termid":"PBO:0043118"}


id: GO:1902297
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any DNA unwinding that is involved in cell cycle DNA replication.","definition_xrefs":["GOC:mtg_cell_cycle","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete cell cycle DNA replication DNA unwinding (obsolete GO:1902297)","synonyms":[{"name":"DNA unwinding during replication involved in cell cycle DNA replication","type":"related"},{"name":"DNA unwinding factor involved in cell cycle DNA replication","type":"related"},{"name":"DNA unwinding involved in cell cycle DNA replication","type":"exact"}],"termid":"GO:1902297"}


id: PBO:0017445
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-produced_by","termid":"PBO:0017445"}


id: SO:0001549
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A variant that changes alters the transcription of a transcript with respect to a reference sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcript_function_variant","termid":"SO:0001538"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription_variant","synonyms":[{"name":"transcription variant","type":"exact"}],"termid":"SO:0001549"}


id: FYPO:0007848
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which microtubules self-assemble into a spindle without the participation of the spindle pole body (SPB) during one or both meiotic nuclear divisions. This phenotype is observed in the absence of both bouquet formation and meiotic SPB insertion into the nuclear envelope.","definition_xrefs":["PomBase:mah","PMID:34346498"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiotic spindle assembly","termid":"FYPO:0000737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0000631","FYPO:0001985","FYPO:0000054"],"is_obsolete":false,"name":"meiotic spindle self-assembly","synonyms":[{"name":"SPB-independent meiotic spindle assembly","type":"exact"},{"name":"SPB-independent spindle assembly during meiosis","type":"exact"},{"name":"acentrosomal meiotic spindle assembly","type":"related"},{"name":"acentrosomal spindle assembly during meiosis","type":"related"},{"name":"meiotic SPB-independent spindle","type":"related"},{"name":"spindle pole body-independent meiotic spindle assembly","type":"exact"},{"name":"spindle pole body-independent spindle assembly during meiosis","type":"exact"},{"name":"spindle self-assembly during meiosis","type":"exact"},{"name":"spindle self-assembly during meiotic nuclear division","type":"exact"}],"termid":"FYPO:0007848"}


id: PR:O94505
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tol1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94505"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3'(2'),5'-bisphosphate nucleotidase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1753.04","synonyms":[{"name":"3'(2'),5-bisphosphonucleoside 3'(2')-phosphohydrolase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"DPNPase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-tol1","type":"exact"},{"name":"halotolerance protein tol1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"target of lithium protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94505"}


id: SO:0002260
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Large Retrotransposon Derivative elements are long-terminal repeats that contain reverse transcriptase priming sites and are conserved in sequence but contain no open reading frames encoding typical retrotransposon proteins . The LARDs identified in barley and other Triticeae have LTRs ~5.5 kb and an interal domain of ~3.5 kb. LARDs lack coding domains and thus do not encode proteins.","definition_xrefs":["PMID:15082561"],"direct_ancestors":[{"relation_name":"is_a","term_name":"LTR_retrotransposon","termid":"SO:0000186"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LARD","synonyms":[{"name":"Large Retrotransposon Derivative","type":"exact"},{"name":"large_retrotransposon_derivative","type":"exact"}],"termid":"SO:0002260"}


id: GO:0046039
data:
  {"annotated_genes":["SJAG_04849","SJAG_01298","SJAG_02887"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[75235,102597,64652],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006183"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving GTP, guanosine triphosphate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine ribonucleotide metabolic process","termid":"GO:0009150"},{"relation_name":"is_a","term_name":"purine ribonucleoside triphosphate metabolic process","termid":"GO:0009205"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01298":null,"SJAG_02887":null,"SJAG_04849":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"GTP metabolic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"GTP metabolism","type":"exact"}],"termid":"GO:0046039","terms_by_termid":{"GO:0006183":null}}


id: GO:1903690
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of wound healing, spreading of epidermal cells.","definition_xrefs":["GO_REF:0000058","GOC:als","PMID:18394891","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell migration","termid":"GO:0030336"},{"relation_name":"is_a","term_name":"negative regulation of wound healing","termid":"GO:0061045"},{"relation_name":"is_a","term_name":"regulation of wound healing, spreading of epidermal cells","termid":"GO:1903689"},{"relation_name":"negatively_regulates","term_name":"wound healing, spreading of epidermal cells","termid":"GO:0035313"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of wound healing, spreading of epidermal cells","synonyms":[{"name":"down regulation of wound healing, spreading of epidermal cells","type":"exact"},{"name":"down-regulation of wound healing, spreading of epidermal cells","type":"exact"},{"name":"downregulation of wound healing, spreading of epidermal cells","type":"exact"},{"name":"inhibition of wound healing, spreading of epidermal cells","type":"narrow"}],"termid":"GO:1903690"}


id: GO:1990523
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regrowth of bone following its loss or destruction.","definition_xrefs":["PMID:25257467"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tissue regeneration","termid":"GO:0042246"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"bone regeneration","termid":"GO:1990523"}


id: MONDO:0004434
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete glomangiomyoma (obsolete MONDO:0004434)","termid":"MONDO:0004434","xrefs":{"Monarch":{"xref_id":"0004434"}}}


id: GO:0001545
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Increase in size of primary follicles including oocyte growth and granulosa and/or theca cell proliferation until more than one layer of granulosa cells is present (preantral follicle).","definition_xrefs":["GOC:mtg_mpo"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ovulation cycle process","termid":"GO:0022602"},{"relation_name":"is_a","term_name":"developmental growth","termid":"GO:0048589"},{"relation_name":"part_of","term_name":"ovarian follicle development","termid":"GO:0001541"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"primary ovarian follicle growth","termid":"GO:0001545"}


id: PBO:0082063
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-hydroxyisobutyryl-CoA hydrolase; member of a family of enoyl-CoA hydratase/isomerases; non-tagged protein is detected in highly purified mitochondria in high-throughput studies; phosphorylated; mutation affects fluid-phase endocytosis","termid":"PBO:0082063"}


id: MONDO:0015835
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"didelphys uterus","termid":"MONDO:0015834"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Bicervical bicornuate uterus and blind hemivagina","secondary_identifiers":["MEDGEN:1842173","UMLS:C5680489","GARD:20177","Orphanet:180106"],"termid":"MONDO:0015835","xrefs":{"Monarch":{"xref_id":"0015835"}}}


id: GO:1902618
data:
  {"annotated_genes":["SJAG_01973"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[114124],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0140114"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a fluoride stimulus.","definition_xrefs":["GOC:TermGenie","PMID:8138152","GO_REF:0000071","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to chemical stimulus","termid":"GO:0070887"},{"relation_name":"is_a","term_name":"response to fluoride","termid":"GO:1902617"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01973":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to fluoride","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1902618","terms_by_termid":{"GO:0140114":null}}


id: GO:0000011
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The distribution of vacuoles into daughter cells after mitosis or meiosis, mediated by interactions between vacuoles and the cytoskeleton.","definition_xrefs":["PMID:14616069","GOC:mcc","PMID:10873824"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vacuole organization","termid":"GO:0007033"},{"relation_name":"is_a","term_name":"organelle inheritance","termid":"GO:0048308"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vacuole inheritance","termid":"GO:0000011"}


id: GO:0061351
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of neural precursor cells, resulting in the expansion of a cell population. A neural precursor cell is either a nervous system stem cell or a nervous system progenitor cell.","definition_xrefs":["GOC:dph","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population proliferation","termid":"GO:0008283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neural precursor cell proliferation","termid":"GO:0061351"}


id: GO:0034631
data:
  {"annotated_genes":["SJAG_01613","SJAG_03835","SJAG_03116","SJAG_01546","SJAG_03062"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[109982],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990734"},{"annotations":[74399,99584,103413,97126],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990810"}]},"cv_name":"biological_process","definition":"Any process in which a microtubule is maintained in a specific location in a cell by attachment to a spindle pole body. Microtubules attach to spindle pole bodies at the minus end.","definition_xrefs":["GOC:mah","PMID:17486116"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle process","termid":"GO:0022402"},{"relation_name":"is_a","term_name":"microtubule anchoring at microtubule organizing center","termid":"GO:0072393"},{"relation_name":"part_of","term_name":"spindle organization","termid":"GO:0007051"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01546":null,"SJAG_01613":null,"SJAG_03062":null,"SJAG_03116":null,"SJAG_03835":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0000226"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0000226"}],"interesting_parent_ids":["GO:0007049","GO:0000226","GO:0007010","GO:0008150"],"is_obsolete":false,"name":"microtubule anchoring at spindle pole body","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"attachment of spindle microtubules to SPB","type":"exact"},{"name":"attachment of spindle microtubules to spindle pole body","type":"exact"},{"name":"microtubule anchoring at SPB","type":"exact"}],"termid":"GO:0034631","terms_by_termid":{"GO:1990734":null,"GO:1990810":null}}


id: PBO:0001489
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"choline kinase (predicted)","termid":"PBO:0001489"}


id: GO:1905783
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The disaggregation of a CENP-A containing nucleosome into its constituent components.","definition_xrefs":["GOC:TermGenie","PMID:27666591","GO_REF:0000079"],"gene_count":0,"genotype_count":0,"name":"obsolete CENP-A containing nucleosome disassembly (obsolete GO:1905783)","synonyms":[{"name":"centromere specific nucleosome disassembly","type":"related"},{"name":"centromere-specific nucleosome disassembly","type":"related"},{"name":"centromeric nucleosome disassembly","type":"related"}],"termid":"GO:1905783"}


id: PBO:0053427
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 370","termid":"PBO:0053427"}


id: PBO:0057159
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 302d","termid":"PBO:0057159"}


id: MONDO:0019212
data:
  {"annotated_genes":["SJAG_03352","SJAG_00580","SJAG_01474","SJAG_04865","SJAG_03349"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87466,87465],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008293"},{"annotations":[86514],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013868"},{"annotations":[86377,86376],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014713"}]},"cv_name":"mondo","definition":"Disseminated superficial actinic porokeratosis (DSAP) is the most common form of porokeratosis characterized by the presence of several small annular plaques with a distinctive keratotic rim found most commonly on sun-exposed areas of the skin, particularly the extremities.","definition_xrefs":["Orphanet:79152"],"direct_ancestors":[{"relation_name":"is_a","term_name":"porokeratosis","termid":"MONDO:0006602"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00580":null,"SJAG_01474":null,"SJAG_03349":null,"SJAG_03352":null,"SJAG_04865":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"disseminated superficial actinic porokeratosis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:10983","icd11.foundation:1828294192","UMLS:C0265970","MEDGEN:120561","SCTID:41495000","ICD9:692.75"],"termid":"MONDO:0019212","terms_by_termid":{"MONDO:0008293":null,"MONDO:0013868":null,"MONDO:0014713":null},"xrefs":{"Monarch":{"xref_id":"0019212"}}}


id: PBO:0066422
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RALBP1 associated Eps domain containing 2","termid":"PBO:0066422"}


id: PBO:0062066
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 3 subfamily A member 4 pseudogene","termid":"PBO:0062066"}


id: PBO:0041099
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bromodomain and WD repeat domain containing 3","termid":"PBO:0041099"}


id: PR:O14179
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A ribosome maturation protein SBDS that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR10927:SF0","OMA:SCHPO01118","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome maturation protein sdo1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4F8.03","secondary_identifiers":["UniProtKB:O14179"],"synonyms":[{"name":"Spom972h-SBDS","type":"exact"}],"termid":"PR:O14179"}


id: PBO:0017759
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oxidoreductase involved in NADPH regeneration (predicted)","termid":"PBO:0017759"}


id: PBO:0003196
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone deacetylase complex subunit Rxt2","termid":"PBO:0003196"}


id: PBO:0069513
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 782, pseudogene","termid":"PBO:0069513"}


id: MONDO:1012250
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spastic lameness, non-human animal","termid":"MONDO:1011794"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spastic lameness, cattle","secondary_identifiers":["OMIA:000926-9913"],"termid":"MONDO:1012250","xrefs":{"Monarch":{"xref_id":"1012250"}}}


id: GO:0033609
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving oxalate, the organic acid ethanedioate.","definition_xrefs":["GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dicarboxylic acid metabolic process","termid":"GO:0043648"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"oxalate metabolic process","synonyms":[{"name":"ethanedioate metabolic process","type":"exact"},{"name":"ethanedioic acid metabolic process","type":"exact"},{"name":"oxalate metabolism","type":"exact"},{"name":"oxalic acid metabolic process","type":"exact"}],"termid":"GO:0033609"}


id: MOD:00135
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-asparagine residue and a glycine residue by an isopeptide bond with formation of N-(L-isoaspartyl)glycine and the release of ammonia.","definition_xrefs":["ChEBI:21479","RESID:AA0126","PubMed:1826288"],"direct_ancestors":[{"relation_name":"is_a","term_name":"crosslinked residues with loss of ammonia","termid":"MOD:00946"},{"relation_name":"is_a","term_name":"N-(L-isoaspartyl)-glycine","termid":"MOD:01928"},{"relation_name":"is_a","term_name":"crosslinked L-asparagine residue","termid":"MOD:02042"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-(L-isoaspartyl)-glycine (Asn)","synonyms":[{"name":"(2S)-2-amino-4-(carboxymethyl)amino-4-oxobutanoic acid","type":"exact"},{"name":"2-amino-N4-(carboxymethyl)-butanediamic acid","type":"exact"},{"name":"CROSSLNK Isoaspartyl glycine isopeptide (Asn-Gly)","type":"exact"},{"name":"CROSSLNK Isoaspartyl glycine isopeptide (Gly-Asn)","type":"exact"},{"name":"N-(L-isoaspartyl)-glycine","type":"exact"},{"name":"N-beta-aspartylglycine","type":"exact"},{"name":"N4-(carboxymethyl)-asparagine","type":"exact"},{"name":"XLNK-4Asp-NGly(Asn)","type":"exact"},{"name":"isoaspartyl glycine","type":"exact"}],"termid":"MOD:00135"}


id: PBO:0048274
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polypeptide N-acetylgalactosaminyltransferase 10","termid":"PBO:0048274"}


id: PBO:0064454
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pogo transposable element derived with KRAB domain","termid":"PBO:0064454"}


id: FYPO:0003008
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which negative regulation of transcription from RNA polymerase II promoter occurs to a lower extent than normal during a cellular response to zinc. Specific genes are more highly transcribed in the presence of zinc in the mutant than in wild type.","definition_xrefs":["PomBase:mah","PMID:22496451"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal negative regulation of transcription during vegetative growth","termid":"FYPO:0000624"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0006551","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"decreased repression of transcription during cellular response to zinc","synonyms":[{"name":"decreased negative regulation of transcription from RNA polymerase II promoter during cellular response to zinc","type":"exact"},{"name":"decreased repression of transcription during cellular response to zinc during mitotic cell cycle","type":"related"},{"name":"decreased repression of transcription during cellular response to zinc during vegetative growth","type":"exact"},{"name":"decreased transcriptional repression during cellular response to zinc","type":"exact"},{"name":"reduced repression of transcription during cellular response to zinc","type":"exact"}],"termid":"FYPO:0003008"}


id: GO:0048451
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to the petal. This process pertains to the initial formation of a structure from unspecified parts.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"floral organ formation","termid":"GO:0048449"},{"relation_name":"part_of","term_name":"petal morphogenesis","termid":"GO:0048446"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"petal formation","secondary_identifiers":["GO:0048419"],"termid":"GO:0048451"}


id: PR:O13453
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pmp1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13453"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tyrosine-protein phosphatase pmp1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1685.01","synonyms":[{"name":"Spom972h-pmp1","type":"exact"}],"termid":"PR:O13453"}


id: PBO:0005045
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exocyst complex subunit Sec6","termid":"PBO:0005045"}


id: PBO:0079782
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP glucuronosyltransferase family 1 member A3","termid":"PBO:0079782"}


id: MONDO:0001121
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An acute or chronic inflammatory process affecting the mucous membrane of the frontal sinus.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sinusitis","termid":"MONDO:0005961"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"frontal sinusitis","secondary_identifiers":["MEDGEN:8919","NCIT:C34626","SCTID:78737005","UMLS:C0016735","MESH:D015522","DOID:10791"],"termid":"MONDO:0001121","xrefs":{"Monarch":{"xref_id":"0001121"}}}


id: PBO:0057309
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 516b-2","termid":"PBO:0057309"}


id: GO:0071848
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any TNFSF11-mediated signaling process that increases the rate, frequency, or extent of the ERK1 and ERK2 cascade.","definition_xrefs":["GOC:BHF","PMID:18606301"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of ERK1 and ERK2 cascade via TNFSF11-mediated signaling (obsolete GO:0071848)","synonyms":[{"name":"positive regulation of ERK1 and ERK2 cascade via RANKL-mediated signaling","type":"exact"},{"name":"positive regulation of ERK1 and ERK2 cascade via TNFSF11-mediated signalling","type":"exact"}],"termid":"GO:0071848"}


id: MOD:01345
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-threonine residue to 2-amino-3-oxobutanoic acid.","definition_xrefs":["OMSSA:23","PubMed:9252331","PubMed:12716131","Unimod:401#T"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-threonine residue","termid":"MOD:00917"},{"relation_name":"is_a","term_name":"didehydrogenated residue","termid":"MOD:01888"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2-amino-3-oxobutanoic acid","synonyms":[{"name":"2-amino-3-ketobutyric acid","type":"exact"},{"name":"2-amino-3-oxo-butanoic_acid","type":"related"},{"name":"3-ketobutyrine","type":"exact"},{"name":"Didehydro","type":"related"},{"name":"twoamino3oxobutanoicacid","type":"exact"}],"termid":"MOD:01345"}


id: PBO:0117094
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PSD3 antisense RNA 1","termid":"PBO:0117094"}


id: PBO:0027128
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_level_of_late_meiotic_gene_mRNA_during_vegetative_growth","termid":"PBO:0027128"}


id: MONDO:0041440
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete functional visual loss (obsolete MONDO:0041440)","secondary_identifiers":["SCTID:313165001"],"synonyms":[{"name":"functional visual loss","type":"exact"},{"name":"nonphysiologic acuity loss","type":"related"},{"name":"nonphysiologic vision loss","type":"related"}],"termid":"MONDO:0041440","xrefs":{"Monarch":{"xref_id":"0041440"}}}


id: PBO:0039652
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AP1M2 pseudogene 1","termid":"PBO:0039652"}


id: PBO:0044063
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cystatin 9","termid":"PBO:0044063"}


id: PBO:0039576
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat and sterile alpha motif domain containing 4B","termid":"PBO:0039576"}


id: MONDO:0000550
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign or malignant sympathetic paraganglioma arising from paraganglia outside the adrenal gland. Clinical symptoms are related to secretion of catecholamines. Representative examples include the superior and inferior paraaortic and bladder paragangliomas.","definition_xrefs":["NCIT:C48576"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sympathetic paraganglioma","termid":"MONDO:0021072"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"extra-adrenal sympathetic paraganglioma","secondary_identifiers":["EFO:0000489","DOID:0050936","MEDGEN:263453","UMLS:C1257877"],"synonyms":[{"name":"extra-adrenal Chromaffinoma","type":"exact"},{"name":"extra-adrenal chromaffin neoplasm","type":"exact"},{"name":"extra-adrenal pheochromocytoma","type":"exact"},{"name":"extra-adrenal sympathetic Paraganglionic neoplasm","type":"exact"},{"name":"extra-adrenal sympathetic paraganglioma","type":"exact"},{"name":"extraadrenal pheochromocytoma","type":"exact"}],"termid":"MONDO:0000550","xrefs":{"Monarch":{"xref_id":"0000550"}}}


id: PBO:0086934
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rab family GTPase; involved in the exocytic pathway; mediates intra-Golgi traffic or the budding of post-Golgi vesicles from the trans-Golgi; YPT31 has a paralog, YPT32, that arose from the whole genome duplication; localizes to the transitional and late Golgi","termid":"PBO:0086934"}


id: GO:0001608
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a nucleotide and transmitting the signal across the membrane by activating an associated G-protein; promotes the exchange of GDP for GTP on the alpha subunit of a heterotrimeric G-protein complex.","definition_xrefs":["GOC:bf","GOC:dph","IUPHAR_GPCR:1294"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor activity","termid":"GO:0004930"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"G protein-coupled nucleotide receptor activity","synonyms":[{"name":"G protein coupled nucleotide receptor activity","type":"exact"},{"name":"G-protein coupled nucleotide receptor activity","type":"exact"},{"name":"nucleotide receptor activity, G protein coupled","type":"exact"},{"name":"nucleotide receptor activity, G-protein coupled","type":"exact"}],"termid":"GO:0001608"}


id: PBO:0083354
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; overlaps the verified gene MET2/YNL277W","termid":"PBO:0083354"}


id: MONDO:1012301
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spondylosis deformans, non-human animal","termid":"MONDO:1011955"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spondylosis deformans, dog","secondary_identifiers":["OMIA:001132-9615"],"termid":"MONDO:1012301","xrefs":{"Monarch":{"xref_id":"1012301"}}}


id: PBO:0080046
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 19","termid":"PBO:0080046"}


id: PR:P87234
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- gyp3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P87234"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase-activating protein gyp3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC4G3.09c","synonyms":[{"name":"Spom972h-gyp3","type":"exact"}],"termid":"PR:P87234"}


id: GO:0000428
data:
  {"annotated_genes":["SJAG_04261","SJAG_03900","SJAG_02653","SJAG_00159","SJAG_00637","SJAG_04917","SJAG_01475","SJAG_02174","SJAG_00512","SJAG_04368","SJAG_00735","SJAG_01151","SJAG_00619","SJAG_03921","SJAG_04559","SJAG_01444","SJAG_03289","SJAG_02506","SJAG_03618","SJAG_02070","SJAG_01436","SJAG_04994","SJAG_02871","SJAG_01313","SJAG_00731","SJAG_00741","SJAG_04654","SJAG_03118","SJAG_00421","SJAG_04274","SJAG_01698","SJAG_01948","SJAG_02600","SJAG_05239","SJAG_03107","SJAG_03285","SJAG_04852","SJAG_03468","SJAG_04894","SJAG_02101","SJAG_01765","SJAG_04030","SJAG_02458","SJAG_03206","SJAG_02172","SJAG_00584","SJAG_04420","SJAG_04934","SJAG_04161","SJAG_03144","SJAG_01562","SJAG_03014","SJAG_02627","SJAG_03761","SJAG_04977","SJAG_01207","SJAG_00116","SJAG_00150","SJAG_00119","SJAG_00139","SJAG_01713","SJAG_00995","SJAG_04106","SJAG_01610","SJAG_03578","SJAG_00872","SJAG_04614","SJAG_01128","SJAG_03035","SJAG_01710","SJAG_00458","SJAG_01808","SJAG_00901","SJAG_00758","SJAG_03181","SJAG_04408","SJAG_03956","SJAG_04933","SJAG_00095","SJAG_02541"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[75378,75671,70815,73234],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005658"},{"annotations":[79001,67235,76601,71398,72917],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0016593"},{"annotations":[87768,77813],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034245"},{"annotations":[113893,102896,75551,77894,74946,76899,77426,90739,113894,105252,115905,75968,70434,71452,76088,76234,74710,114596],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005736"},{"annotations":[71265,74868,78541,79338,75966,76897,77424,73714,113230,73168,75549,75761,71450],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"GO:0005665"},{"annotations":[75967,93388,77099,117148,71725,63343,77425,74709,71451,80065,80183,70433,75550,75224,73664,76898,71526],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005666"},{"annotations":[72339,79013],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005672"},{"annotations":[71106,103978,74866,75318,80697,58093,75989,71753,117946,74071,95938,77225,70311,59489,77085,68490],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005669"},{"annotations":[76572,70530],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005673"},{"annotations":[70312,79520,80775],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005674"},{"annotations":[92536,70425,74750,109358,70721,79113,115210,76777],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005675"},{"annotations":[76637,60994,112466],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070985"}]},"cv_name":"cellular_component","definition":"A protein complex that possesses DNA-directed RNA polymerase activity.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase complex","termid":"GO:0030880"}],"gene_count":80,"genes_by_uniquename":{"SJAG_00095":null,"SJAG_00116":null,"SJAG_00119":null,"SJAG_00139":null,"SJAG_00150":null,"SJAG_00159":null,"SJAG_00421":null,"SJAG_00458":null,"SJAG_00512":null,"SJAG_00584":null,"SJAG_00619":null,"SJAG_00637":null,"SJAG_00731":null,"SJAG_00735":null,"SJAG_00741":null,"SJAG_00758":null,"SJAG_00872":null,"SJAG_00901":null,"SJAG_00995":null,"SJAG_01128":null,"SJAG_01151":null,"SJAG_01207":null,"SJAG_01313":null,"SJAG_01436":null,"SJAG_01444":null,"SJAG_01475":null,"SJAG_01562":null,"SJAG_01610":null,"SJAG_01698":null,"SJAG_01710":null,"SJAG_01713":null,"SJAG_01765":null,"SJAG_01808":null,"SJAG_01948":null,"SJAG_02070":null,"SJAG_02101":null,"SJAG_02172":null,"SJAG_02174":null,"SJAG_02458":null,"SJAG_02506":null,"SJAG_02541":null,"SJAG_02600":null,"SJAG_02627":null,"SJAG_02653":null,"SJAG_02871":null,"SJAG_03014":null,"SJAG_03035":null,"SJAG_03107":null,"SJAG_03118":null,"SJAG_03144":null,"SJAG_03181":null,"SJAG_03206":null,"SJAG_03285":null,"SJAG_03289":null,"SJAG_03468":null,"SJAG_03578":null,"SJAG_03618":null,"SJAG_03761":null,"SJAG_03900":null,"SJAG_03921":null,"SJAG_03956":null,"SJAG_04030":null,"SJAG_04106":null,"SJAG_04161":null,"SJAG_04261":null,"SJAG_04274":null,"SJAG_04368":null,"SJAG_04408":null,"SJAG_04420":null,"SJAG_04559":null,"SJAG_04614":null,"SJAG_04654":null,"SJAG_04852":null,"SJAG_04894":null,"SJAG_04917":null,"SJAG_04933":null,"SJAG_04934":null,"SJAG_04977":null,"SJAG_04994":null,"SJAG_05239":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"DNA-directed RNA polymerase complex","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"termid":"GO:0000428","terms_by_termid":{"GO:0005658":null,"GO:0005665":null,"GO:0005666":null,"GO:0005669":null,"GO:0005672":null,"GO:0005673":null,"GO:0005674":null,"GO:0005675":null,"GO:0005736":null,"GO:0016593":null,"GO:0034245":null,"GO:0070985":null}}


id: PBO:0052794
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 34","termid":"PBO:0052794"}


id: PBO:0110482
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lncRNA antiviral response interferon signaling inducer","termid":"PBO:0110482"}


id: PBO:0030084
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_localization_to_cell_tip","termid":"PBO:0030084"}


id: PBO:0068948
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 192, pseudogene","termid":"PBO:0068948"}


id: MONDO:0015524
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hyperplastic polyposis syndrome is a rare, genetic intestinal disease characterized by the presence of multiple (usually large) hyperplastic/serrated colorectal polyps, usually with a pancolonic distribution. Histology reveals hyperplastic polyps, sessile serrated adenomas (most common), traditional serrated adenomas or mixed polyps. It is associated with an increased personal and familial (first-degree relatives) risk of colorectal cancer.","definition_xrefs":["Orphanet:157798"],"direct_ancestors":[{"relation_name":"is_a","term_name":"digestive system disorder","termid":"MONDO:0004335"},{"relation_name":"is_a","term_name":"intestinal polyposis syndrome","termid":"MONDO:0015185"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"hyperplastic polyposis syndrome","secondary_identifiers":["MEDGEN:1645454","icd11.foundation:1344352020","NCIT:C165469","GARD:16982","SCTID:763536006","UMLS:C4296896"],"synonyms":[{"name":"serrated polyposis","type":"exact"}],"termid":"MONDO:0015524","xrefs":{"Monarch":{"xref_id":"0015524"}}}


id: PATO:0000806
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000806 olfactory value (obsolete PATO:0000806)","termid":"PATO:0000806"}


id: PBO:0028620
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_ribonucleoprotein_complex_binding","termid":"PBO:0028620"}


id: PBO:0068214
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 521","termid":"PBO:0068214"}


id: SO:0000620
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A variably distant linear promoter region recognized by TFIIIC, with consensus sequence AGGTTCCAnnCC.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"core_eukaryotic_promoter_element","termid":"SO:0001660"},{"relation_name":"part_of","term_name":"RNApol_III_promoter_type_2","termid":"SO:0000618"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"B_box","synonyms":[{"name":"B-box","type":"exact"}],"termid":"SO:0000620"}


id: PBO:0047482
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"farnesyl diphosphate synthase pseudogene 9","termid":"PBO:0047482"}


id: PBO:0004750
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c heme lyase (predicted)","termid":"PBO:0004750"}


id: MONDO:0035649
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"myotonic dystrophy","termid":"MONDO:0016107"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"adult-onset Steinert myotonic dystrophy","secondary_identifiers":["MEDGEN:1843180","Orphanet:589830","GARD:22364","ICD10CM:G71.1","UMLS:C5680309"],"synonyms":[{"name":"Adult-onset Steinert disease","type":"exact"},{"name":"Adult-onset myotonic dystrophy type 1","type":"exact"}],"termid":"MONDO:0035649","xrefs":{"Monarch":{"xref_id":"0035649"}}}


id: PBO:0077725
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TNRC6B divergent transcript","termid":"PBO:0077725"}


id: PBO:0054762
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2174","termid":"PBO:0054762"}


id: GO:0010817
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the levels of hormone within an organism or a tissue. A hormone is any substance formed in very small amounts in one specialized organ or group of cells and carried (sometimes in the bloodstream) to another organ or group of cells in the same organism, upon which it has a specific regulatory action.","definition_xrefs":["GOC:dph","GOC:tb","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of biological quality","termid":"GO:0065008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of hormone levels","termid":"GO:0010817"}


id: FYPO:0003640
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of adenylate kinase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"},{"relation_name":"is_a","term_name":"abnormal metabolic process","termid":"FYPO:0000860"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0000707","FYPO:0000661","FYPO:0000654","FYPO:0001985","FYPO:0000652"],"is_obsolete":false,"name":"abnormal adenylate kinase activity","termid":"FYPO:0003640"}


id: PBO:0068599
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 50, pseudogene","termid":"PBO:0068599"}


id: PBO:0091829
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved fungal cell wall protein, Kre9/Knh1 family Knh1","termid":"PBO:0091829"}


id: MONDO:0001201
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete MONDO:0001201 (obsolete MONDO:0001201)","termid":"MONDO:0001201","xrefs":{"Monarch":{"xref_id":"0001201"}}}


id: PATO:0000894
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000894 cytoplasmic sterility value (obsolete PATO:0000894)","termid":"PATO:0000894"}


id: GO:0016900
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of an oxidation-reduction (redox) reaction in which a CH-OH group acts as a hydrogen or electron donor and reduces a disulfide molecule.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete oxidoreductase activity, acting on the CH-OH group of donors, disulfide as acceptor (obsolete GO:0016900)","synonyms":[{"name":"oxidoreductase activity, acting on the CH-OH group of donors, disulphide as acceptor","type":"exact"}],"termid":"GO:0016900"}


id: PR:Q09779
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A THO complex subunit 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00263","PANTHER:PTHR21597:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THO complex subunit 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1D4.14","secondary_identifiers":["UniProtKB:Q09779"],"synonyms":[{"name":"Spom972h-THOC2","type":"exact"}],"termid":"PR:Q09779"}


id: GO:0120248
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of an acetylenic compound, any compound which contains a carbon-carbon triple bond (aka C#C).","definition_xrefs":["GOC:krc","DOI:10.1007/978-1-4615-4913-0_3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catabolic process","termid":"GO:0009056"},{"relation_name":"is_a","term_name":"acetylenic compound metabolic process","termid":"GO:0120246"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"acetylenic compound catabolic process","synonyms":[{"name":"alkyne substituted compound breakdown","type":"exact"},{"name":"alkyne substituted compound catabolic process","type":"exact"},{"name":"alkyne substituted compound catabolism","type":"exact"},{"name":"alkyne substituted compound degradation","type":"exact"}],"termid":"GO:0120248"}


id: GO:0042560
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of any compound containing pteridine (pyrazino(2,3-dipyrimidine)), e.g. pteroic acid, xanthopterin and folic acid.","definition_xrefs":["GOC:jl","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catabolic process","termid":"GO:0009056"},{"relation_name":"is_a","term_name":"pteridine-containing compound metabolic process","termid":"GO:0042558"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pteridine-containing compound catabolic process","synonyms":[{"name":"pteridine and derivative catabolic process","type":"exact"},{"name":"pteridine and derivative catabolism","type":"exact"},{"name":"pteridine-containing compound breakdown","type":"exact"},{"name":"pteridine-containing compound catabolism","type":"exact"},{"name":"pteridine-containing compound degradation","type":"exact"},{"name":"pterin catabolic process","type":"narrow"},{"name":"pterin catabolism","type":"narrow"}],"termid":"GO:0042560"}


id: PBO:0069218
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 473, pseudogene","termid":"PBO:0069218"}


id: PBO:0056846
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-6-methylguanine-DNA methyltransferase","termid":"PBO:0056846"}


id: MONDO:0060777
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A usually solitary polypoid lesion that arises from the cervix. It usually affects women in their reproductive years. It is characterized by the presence of a connective tissue core and overlying epithelium.","definition_xrefs":["NCIT:C40200"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cervical polyp","termid":"MONDO:0000751"},{"relation_name":"is_a","term_name":"fibroepithelial polyp","termid":"MONDO:0060765"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cervical fibroepithelial polyp","secondary_identifiers":["MEDGEN:308945","UMLS:C1516413"],"synonyms":[{"name":"Cervical fibroepithelial polyp","type":"exact"},{"name":"uterine cervix fibroepithelial polyp","type":"exact"}],"termid":"MONDO:0060777","xrefs":{"Monarch":{"xref_id":"0060777"}}}


id: PR:Q9Y7Y1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC365.07c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9Y7Y1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein sgm1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC365.07c","synonyms":[{"name":"Spom972h-SPBC365.07c","type":"exact"}],"termid":"PR:Q9Y7Y1"}


id: MONDO:0004301
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A conventional osteosarcoma characterized by the presence of spindle shaped cells.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"conventional osteosarcoma","termid":"MONDO:0002631"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"fibrosarcomatous osteosarcoma","secondary_identifiers":["ICDO:9182/3","UMLS:C0279602","NCIT:C4020","ONCOTREE:FIOS","MEDGEN:79012","DOID:7603"],"synonyms":[{"name":"FIOS","type":"related"},{"name":"fibroblastic osteogenic sarcoma","type":"exact"},{"name":"fibroblastic osteosarcoma","type":"exact"},{"name":"fibroblastic osteosarcoma (morphologic abnormality)","type":"exact"},{"name":"fibrosarcomatous osteogenic sarcoma","type":"exact"},{"name":"fibrosarcomatous osteosarcoma","type":"exact"}],"termid":"MONDO:0004301","xrefs":{"Monarch":{"xref_id":"0004301"}}}


id: GO:0032124
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the macronucleus.","definition_xrefs":["GOC:jl","GOC:dph","GOC:mah","PMID:10503190"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleus organization","termid":"GO:0006997"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"macronucleus organization","synonyms":[{"name":"macronuclear organization","type":"exact"},{"name":"macronuclear organization and biogenesis","type":"related"},{"name":"macronucleus organisation","type":"exact"}],"termid":"GO:0032124"}


id: GO:0001761
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of beta-alanine from one side of a membrane to the other. Beta-alanine is 3-aminopropanoic acid.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neutral L-amino acid transmembrane transporter activity","termid":"GO:0015175"},{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transporter activity","termid":"GO:0046943"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"beta-alanine transmembrane transporter activity","synonyms":[{"name":"beta-alanine transporter activity","type":"broad"}],"termid":"GO:0001761"}


id: PBO:0061904
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"opiorphin prepropeptide","termid":"PBO:0061904"}


id: GO:0047380
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: H2O + a medium-chain acyl-CoA = a medium-chain carboxylate + CoA. Requires ADP.","definition_xrefs":["MetaCyc:3.1.2.19-RXN","EC:3.1.2.19"],"gene_count":0,"genotype_count":0,"name":"obsolete ADP-dependent medium-chain-acyl-CoA hydrolase activity (obsolete GO:0047380)","synonyms":[{"name":"ADP-dependent medium-chain acyl coenzyme A hydrolase activity","type":"related"},{"name":"ADP-dependent medium-chain acyl-CoA hydrolase activity","type":"related"},{"name":"ADP-dependent medium-chain acyl-thioester hydrolase activity","type":"related"},{"name":"ADP-dependent medium-chain hydrolase activity","type":"related"},{"name":"ADP-dependent myristoyl-CoA thioesterase activity","type":"narrow"},{"name":"ADP-dependent-medium-chain-acyl-CoA hydrolase activity","type":"related"}],"termid":"GO:0047380"}


id: PBO:0003969
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rab geranylgeranyltransferase escort protein (predicted)","termid":"PBO:0003969"}


id: PBO:0000983
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cysteine synthase Cys12","termid":"PBO:0000983"}


id: GO:0045548
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-phenylalanine = NH4 + trans-cinnamate.","definition_xrefs":["RHEA:21384"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ammonia-lyase activity","termid":"GO:0016841"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"phenylalanine ammonia-lyase activity","secondary_identifiers":["EC:4.3.1.24"],"synonyms":[{"name":"L-phenylalanine ammonia-lyase activity","type":"related"},{"name":"PAL activity","type":"broad"},{"name":"phe ammonia-lyase activity","type":"related"},{"name":"phenylalanine ammonium-lyase activity","type":"related"},{"name":"phenylalanine deaminase activity","type":"related"}],"termid":"GO:0045548"}


id: PBO:0113429
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Serine/threonine protein kinase; inhibits the mitotic exit network (MEN) when the spindle position checkpoint (SPOC) is activated; regulates peroxisomal transport and vacuolar inheritance along with Frk1p; protects the peroxisomal Myo2p receptor Inp2p from degradation in mother cells along with Frk1p; localizes asymmetrically to mother cell cortex, spindle pole body and bud neck; KIN4 has a paralog, FRK1, that arose from the whole genome duplication","termid":"PBO:0113429"}


id: PBO:0080414
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar protein sorting 45 homolog","termid":"PBO:0080414"}


id: PBO:0119274
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. cerevisiae YOR152C","termid":"PBO:0119274"}


id: PBO:0072859
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAP domain containing ribonucleoprotein","termid":"PBO:0072859"}


id: PBO:0075800
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SS18 like 2 pseudogene 1","termid":"PBO:0075800"}


id: PBO:0051014
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"insulin like growth factor 2 mRNA binding protein 1","termid":"PBO:0051014"}


id: PBO:0049351
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"general transcription factor IIi pseudogene 9","termid":"PBO:0049351"}


id: PATO:0001898
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A circumference which is relatively high.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"circumference","termid":"PATO:0001648"},{"relation_name":"is_a","term_name":"increased perimeter","termid":"PATO:0001712"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased circumference","termid":"PATO:0001898"}


id: GO:0009303
data:
  {"annotated_genes":["SJAG_03956","SJAG_01948","SJAG_01444","SJAG_02871","SJAG_03578","SJAG_02101","SJAG_01765","SJAG_01698","SJAG_01313","SJAG_02070","SJAG_02653","SJAG_01128","SJAG_03144","SJAG_02815","SJAG_00139","SJAG_04106","SJAG_02813","SJAG_00731","SJAG_04261","SJAG_00202","SJAG_02747","SJAG_04766","SJAG_01562","SJAG_00692"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[74152],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042791"},{"annotations":[60021,76084,79743,79538,80233],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042790"},{"annotations":[115910,113897,114184,77896,70435,103707,106167,75552,74947,113898,105254,114598,111061,113519,90742,95578,92398,103046],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006362"}]},"cv_name":"biological_process","definition":"The synthesis of ribosomal RNA (rRNA), any RNA that forms part of the ribosomal structure, from a DNA template.","definition_xrefs":["GOC:jl","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA-templated transcription","termid":"GO:0006351"},{"relation_name":"is_a","term_name":"rRNA metabolic process","termid":"GO:0016072"}],"gene_count":24,"genes_by_uniquename":{"SJAG_00139":null,"SJAG_00202":null,"SJAG_00692":null,"SJAG_00731":null,"SJAG_01128":null,"SJAG_01313":null,"SJAG_01444":null,"SJAG_01562":null,"SJAG_01698":null,"SJAG_01765":null,"SJAG_01948":null,"SJAG_02070":null,"SJAG_02101":null,"SJAG_02653":null,"SJAG_02747":null,"SJAG_02813":null,"SJAG_02815":null,"SJAG_02871":null,"SJAG_03144":null,"SJAG_03578":null,"SJAG_03956":null,"SJAG_04106":null,"SJAG_04261":null,"SJAG_04766":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006351"}],"interesting_parent_ids":["GO:0010467","GO:0006351","GO:0008150"],"is_obsolete":false,"name":"rRNA transcription","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"rRNA biosynthesis","type":"broad"},{"name":"rRNA biosynthetic process","type":"broad"},{"name":"rRNA synthesis","type":"broad"}],"termid":"GO:0009303","terms_by_termid":{"GO:0006362":null,"GO:0042790":null,"GO:0042791":null}}


id: PATO:0000006
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000006 process (obsolete PATO:0000006)","termid":"PATO:0000006"}


id: PBO:0013077
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"does not functionally complement E. coli hisB","termid":"PBO:0013077"}


id: GO:0030679
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A ribonuclease P complex located in the cyanelle, where it catalyzes the 5' endonucleolytic cleavage of precursor tRNAs to yield mature tRNAs. The best characterized cyanelle ribonuclease P complex, from the alga Cyanophora paradoxa, contains a single RNA molecule that is necessary but not sufficient for catalysis, and several protein molecules.","definition_xrefs":["GOC:mah","PMID:12045094"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multimeric ribonuclease P complex","termid":"GO:0030681"},{"relation_name":"part_of","term_name":"cyanelle","termid":"GO:0009842"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"cyanelle ribonuclease P complex","synonyms":[{"name":"cyanelle RNase P complex","type":"exact"}],"termid":"GO:0030679"}


id: GO:0032164
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A faint structure formed of septins found at the leading edge of growth in hyphae of fungal cells growing filamentously. This cap of septins colocalizes with a region of the plasma membrane that is rich in ergosterol.","definition_xrefs":["GOC:krc","PMID:16151244"],"direct_ancestors":[{"relation_name":"is_a","term_name":"septin cap","termid":"GO:0032159"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"hyphal septin cap","termid":"GO:0032164"}


id: PBO:0077586
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thymopoietin","termid":"PBO:0077586"}


id: GO:0004839
data:
  {"annotated_genes":["SJAG_00853"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[74287],"is_not":false,"summary":null,"term":"GO:0004839"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: E1 + ubiquitin + ATP--> E1-ubiquitin + AMP + PPi, where the E1-ubiquitin linkage is a thioester bond between the C-terminal glycine of Ub and a sulfhydryl side group of an E1 cysteine residue. This is the first step in a cascade of reactions in which ubiquitin is ultimately added to a protein substrate.","definition_xrefs":["GOC:BioGRID","Wikipedia:Ubiquitin-activating_enzyme"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ubiquitin-like modifier activating enzyme activity","termid":"GO:0008641"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00853":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0016874","GO:0003824","GO:0140096","GO:0003674"],"is_obsolete":false,"name":"ubiquitin activating enzyme activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-8852134","Reactome:R-HSA-8865098","Reactome:R-HSA-8852132","Reactome:R-HSA-8865050","Reactome:R-HSA-8852133","EC:6.2.1.45","Reactome:R-HSA-8865090"],"synonyms":[{"name":"E1 ubiquitin-activating enzyme","type":"related"}],"termid":"GO:0004839","terms_by_termid":{"GO:0004839":null}}


id: PBO:0003057
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenine deaminase Dea2","termid":"PBO:0003057"}


id: GO:0052823
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (2Z,4E,7E)-2-hydroxy-6-oxonona-2,4,7-trienedioate + H2O = (2Z)-2-hydroxypenta-2,4-dienoate + fumarate + H+.","definition_xrefs":["RHEA:34191"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on acid carbon-carbon bonds, in ketonic substances","termid":"GO:0016823"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"2-hydroxy-6-oxonona-2,4,7-trienedioate hydrolase activity","secondary_identifiers":["MetaCyc:RXN-12070","UM-BBD_reactionID:r1622","KEGG_REACTION:R06789"],"synonyms":[{"name":"(2E,4Z,7E)-2-hydroxy-6-oxonona-2,4,7-trienedioate fumarylhydrolase activity","type":"exact"},{"name":"2-hydroxy-6-ketonona-2,4,7-trienedoic acid hydrolase activity","type":"exact"}],"termid":"GO:0052823"}


id: GO:0045051
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process of protein insertion into the endoplasmic reticulum (ER) membrane in which signal anchor sequences function as both ER signal sequences and membrane anchor sequences.","definition_xrefs":["ISBN:0716731363"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein insertion into ER membrane","termid":"GO:0045048"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0008150","GO:0061024","GO:0051179"],"is_obsolete":false,"name":"protein insertion into ER membrane by internal uncleaved signal-anchor sequence","synonyms":[{"name":"internal uncleaved signal-anchor sequence mediated protein insertion into ER membrane","type":"exact"},{"name":"protein insertion into ER membrane, internal uncleaved signal-anchor sequence mediated","type":"exact"},{"name":"protein insertion into endoplasmic reticulum membrane by internal uncleaved signal-anchor sequence","type":"exact"},{"name":"protein-ER insertion by internal uncleaved signal-anchor sequence","type":"exact"},{"name":"protein-endoplasmic reticulum insertion by internal uncleaved signal-anchor sequence","type":"exact"}],"termid":"GO:0045051"}


id: PBO:0056451
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microtubule affinity regulating kinase 3 pseudogene 3","termid":"PBO:0056451"}


id: GO:0022898
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of transmembrane transporter activity.","definition_xrefs":["GOC:mtg_transport","GOC:mtg_cardio","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transporter activity","termid":"GO:0032409"},{"relation_name":"is_a","term_name":"regulation of transmembrane transport","termid":"GO:0034762"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0006810","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"regulation of transmembrane transporter activity","termid":"GO:0022898"}


id: GO:0006011
data:
  {"annotated_genes":["SJAG_01209","SJAG_02178","SJAG_01089"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72944,80416,109280],"is_not":false,"summary":null,"term":"GO:0006011"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving UDP-alpha-D-glucose, a substance composed of alpha-D-glucose in glycosidic linkage with uridine diphosphate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide-sugar metabolic process","termid":"GO:0009225"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01089":null,"SJAG_01209":null,"SJAG_02178":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"UDP-alpha-D-glucose metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"UDP-glucose metabolism","type":"exact"}],"termid":"GO:0006011","terms_by_termid":{"GO:0006011":null}}


id: PBO:0082736
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the Rpd3L histone deacetylase complex; zinc-finger inhibitor of HO transcription; mRNA is localized and translated in the distal tip of anaphase cells, resulting in accumulation of Ash1p in daughter cell nuclei and inhibition of HO expression; potential Cdc28p substrate","termid":"PBO:0082736"}


id: PBO:0073947
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC20A1 divergent transcript","termid":"PBO:0073947"}


id: GO:0018934
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving nitrilotriacetate, an aminotricarboxylic acid that binds bivalent metal ions in a ratio of 1:1. As an important industrial chelating agent, NTA has been widely used for various radionuclide processing and decontamination procedures, such as textile, paper and pulp processing and water treatment.","definition_xrefs":["UM-BBD_pathwayID:nta"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xenobiotic metabolic process","termid":"GO:0006805"},{"relation_name":"is_a","term_name":"tricarboxylic acid metabolic process","termid":"GO:0072350"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"nitrilotriacetate metabolic process","synonyms":[{"name":"nitrilotriacetate metabolism","type":"exact"}],"termid":"GO:0018934"}


id: PBO:0047711
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"flavin containing dimethylaniline monoxygenase 2","termid":"PBO:0047711"}


id: GO:0008440
data:
  {"annotated_genes":["SJAG_02321","SJAG_03409"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[71637,75959],"is_not":false,"summary":null,"term":"GO:0008440"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 1D-myo-inositol 1,4,5-trisphosphate + ATP = 1D-myo-inositol 1,3,4,5-tetrakisphosphate + ADP + H+.","definition_xrefs":["RHEA:11020"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inositol trisphosphate kinase activity","termid":"GO:0051766"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02321":null,"SJAG_03409":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016301","GO:0003674"],"is_obsolete":false,"name":"inositol-1,4,5-trisphosphate 3-kinase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["EC:2.7.1.127","KEGG_REACTION:R03433","Reactome:R-HSA-1855153","Reactome:R-HSA-1855233","MetaCyc:2.7.1.127-RXN"],"synonyms":[{"name":"1D-myo-inositol-trisphosphate 3-kinase activity","type":"broad"},{"name":"IP3 3-kinase activity","type":"narrow"},{"name":"IP3K activity","type":"narrow"},{"name":"Ins(1,4,5)P3 3-kinase activity","type":"related"},{"name":"inositol trisphosphate 3-kinase activity","type":"broad"},{"name":"inositol-trisphosphate 3-kinase activity","type":"broad"}],"termid":"GO:0008440","terms_by_termid":{"GO:0008440":null}}


id: GO:0032377
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the directed movement of lipids within cells.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of lipid transport","termid":"GO:0032368"},{"relation_name":"is_a","term_name":"regulation of intracellular transport","termid":"GO:0032386"},{"relation_name":"regulates","term_name":"intracellular lipid transport","termid":"GO:0032365"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of intracellular lipid transport","termid":"GO:0032377"}


id: PR:C6Y4A5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC6F6.19 gene.","definition_xrefs":["PRO:DNx","UniProtKB:C6Y4A5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C6F6.19 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6F6.19","synonyms":[{"name":"Spom972h-SPAC6F6.19","type":"exact"}],"termid":"PR:C6Y4A5"}


id: PBO:0063747
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PHB1 pseudogene 12","termid":"PBO:0063747"}


id: PATO:0000941
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a cytoplasm that contains fluid filled cavities.","definition_xrefs":["PATOC:mh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure, cavities","termid":"PATO:0002014"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolated","termid":"PATO:0000941"}


id: FYPO:0003634
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which U1 snRNP binding by a gene product is decreased. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein-protein interaction","termid":"FYPO:0001645"},{"relation_name":"is_a","term_name":"abnormal ribonucleoprotein complex binding","termid":"FYPO:0003632"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000702"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0001985","FYPO:0000707","FYPO:0000702"],"is_obsolete":false,"name":"decreased U1 snRNP binding","synonyms":[{"name":"reduced U1 snRNP binding","type":"exact"}],"termid":"FYPO:0003634"}


id: PBO:0091045
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CwfJ family protein, splicing factor","termid":"PBO:0091045"}


id: MONDO:0012416
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Devriendt syndrome","secondary_identifiers":["UMLS:C1857830","MEDGEN:341860","OMIM:610136","MESH:C535947"],"synonyms":[{"name":"Devriendt syndrome","type":"exact"},{"name":"severe short stature, hyperphalangy of the index fingers, intellectual disability and facial dysmorphism","type":"related"},{"name":"severe short stature, hyperphalangy of the index fingers, mental retardation and facial dysmorphism","type":"related"}],"termid":"MONDO:0012416","xrefs":{"Monarch":{"xref_id":"0012416"}}}


id: SO:0001800
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The sequence of a 21 nucleotide double stranded, polyadenylated non coding RNA, transcribed from the TAS gene.","definition_xrefs":["PMID:16145017"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"tasiRNA_primary_transcript","termid":"SO:0001801"},{"relation_name":"is_a","term_name":"ncRNA","termid":"SO:0000655"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tasiRNA","synonyms":[{"name":"trans acting small interfering RNA","type":"related"}],"termid":"SO:0001800"}


id: MONDO:0001374
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant mesenchymal cell neoplasm that affects the urinary bladder.","definition_xrefs":["NCIT:C4669"],"direct_ancestors":[{"relation_name":"is_a","term_name":"urinary bladder cancer","termid":"MONDO:0001187"},{"relation_name":"is_a","term_name":"soft tissue sarcoma","termid":"MONDO:0018078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"bladder sarcoma","secondary_identifiers":["SCTID:278046008","DOID:11812","MEDGEN:87612","UMLS:C0349666"],"synonyms":[{"name":"bladder sarcoma","type":"exact"},{"name":"sarcoma of bladder","type":"exact"},{"name":"sarcoma of the bladder","type":"exact"},{"name":"sarcoma of the urinary bladder","type":"exact"},{"name":"sarcoma of urinary bladder","type":"exact"},{"name":"urinary bladder sarcoma","type":"exact"}],"termid":"MONDO:0001374","xrefs":{"Monarch":{"xref_id":"0001374"}}}


id: GO:0000717
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The unwinding, or local denaturation, of the DNA duplex to create a bubble around the site of the DNA damage.","definition_xrefs":["PMID:10197977","GOC:elh"],"gene_count":0,"genotype_count":0,"name":"obsolete nucleotide-excision repair, DNA duplex unwinding (obsolete GO:0000717)","termid":"GO:0000717"}


id: FYPO:0005941
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which meiotic DNA double-strand break clipping is normal (i.e. indistinguishable from wild type). Meiotic DNA double-strand break clipping is the process by which SPO11/Rec12-oligonucleotide complexes are removed from 5' DNA double-strand breaks induced during meiosis.","definition_xrefs":["PomBase:mah","GO:1990898"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal meiotic cell cycle process","termid":"FYPO:0007078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal meiotic DNA double-strand break clipping","termid":"FYPO:0005941"}


id: GO:0010410
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving hemicelluloses, plant cell wall polysaccharides that have a backbone of 1,4-linked beta-D-pyranosyl residues in which O4 is in the equatorial orientation. Many different hemicelluloses usually occur intermixed with each molecular type representing different degrees of polymerization and contain many different sugar monomers, which can include glucose, xylose, mannose, galactose, and arabinose. Hemicelluloses also contain most of the D-pentose sugars and occasionally small amounts of L-sugars as well. Xylose is always the sugar monomer present in the largest amount, but mannuronic acid and galacturonic acid also tend to be present.","definition_xrefs":["GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell wall polysaccharide metabolic process","termid":"GO:0010383"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0071554"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0071554","GO:0008150"],"is_obsolete":false,"name":"hemicellulose metabolic process","synonyms":[{"name":"hemicellulose metabolism","type":"exact"}],"termid":"GO:0010410"}


id: PBO:0065847
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB11B, member RAS oncogene family","termid":"PBO:0065847"}


id: GO:0046171
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of octanol, the 8-carbon alcohol with the formula C8H17OH.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"octanol metabolic process","termid":"GO:0006070"},{"relation_name":"is_a","term_name":"primary alcohol biosynthetic process","termid":"GO:0034309"},{"relation_name":"is_a","term_name":"fatty alcohol biosynthetic process","termid":"GO:1903175"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0044281","GO:0006629","GO:0008150"],"is_obsolete":false,"name":"octanol biosynthetic process","synonyms":[{"name":"octanol anabolism","type":"exact"},{"name":"octanol biosynthesis","type":"exact"},{"name":"octanol formation","type":"exact"},{"name":"octanol synthesis","type":"exact"}],"termid":"GO:0046171"}


id: GO:0000222
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The V0 domain of a proton-transporting V-type ATPase found in the plasma membrane.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proton-transporting V-type ATPase, V0 domain","termid":"GO:0033179"},{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"},{"relation_name":"part_of","term_name":"plasma membrane proton-transporting V-type ATPase complex","termid":"GO:0033181"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005886"],"is_obsolete":false,"name":"plasma membrane proton-transporting V-type ATPase, V0 domain","synonyms":[{"name":"plasma membrane hydrogen ion-transporting ATPase V0 domain","type":"exact"}],"termid":"GO:0000222"}


id: GO:0140835
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + RNA polymerase II large subunit CTD heptapeptide repeat (consensus YSPTSPS) = ADP + H+ + RNA polymerase II large subunit phosphothreonine (position 4).","definition_xrefs":["PMID:28248323"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II CTD heptapeptide repeat kinase activity","termid":"GO:0008353"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0004672","GO:0016740","GO:0016301","GO:0140096","GO:0003824"],"is_obsolete":false,"name":"RNA polymerase II CTD heptapeptide repeat T4 kinase activity","synonyms":[{"name":"RNA polymerase II C-terminal domain T4 kinase activity","type":"exact"}],"termid":"GO:0140835"}


id: PBO:0089848
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"blue light photoreceptor Wcs1","termid":"PBO:0089848"}


id: GO:0061872
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The actin filament-based process in which cytoplasmic actin filaments slide past one another resulting in contraction of a hepatic stellate cell.","definition_xrefs":["PMID:24204762"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actin-mediated cell contraction","termid":"GO:0070252"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hepatic stellate cell contraction","termid":"GO:0061872"}


id: GO:0005230
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of an ion by a channel that opens when a specific extracellular ligand has been bound by the channel complex or one of its constituent parts.","definition_xrefs":["GOC:mtg_transport","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligand-gated monoatomic ion channel activity","termid":"GO:0015276"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"extracellular ligand-gated monoatomic ion channel activity","synonyms":[{"name":"extracellular ligand-gated ion channel activity","type":"broad"}],"termid":"GO:0005230"}


id: SO:0001834
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The constant region of an immunoglobulin polypeptide sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immunoglobulin_region","termid":"SO:0001832"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"C_region","synonyms":[{"name":"C region","type":"exact"}],"termid":"SO:0001834"}


id: PBO:0031149
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_polysaccharide_level","termid":"PBO:0031149"}


id: PBO:0011128
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar amino acid import transporter Avt5","termid":"PBO:0011128"}


id: GO:1902014
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of poly(glycerol phosphate) teichoic acid.","definition_xrefs":["PMID:11882717","GOC:TermGenie","UniPathway:UPA00827"],"direct_ancestors":[{"relation_name":"is_a","term_name":"teichoic acid biosynthetic process","termid":"GO:0019350"},{"relation_name":"is_a","term_name":"poly(glycerol phosphate) teichoic acid metabolic process","termid":"GO:1902013"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0071554"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0044281","GO:0071554"],"is_obsolete":false,"name":"poly(glycerol phosphate) teichoic acid biosynthetic process","synonyms":[{"name":"poly(glycerol phosphate) teichoic acid anabolism","type":"exact"},{"name":"poly(glycerol phosphate) teichoic acid biosynthesis","type":"exact"},{"name":"poly(glycerol phosphate) teichoic acid formation","type":"exact"},{"name":"poly(glycerol phosphate) teichoic acid synthesis","type":"exact"}],"termid":"GO:1902014"}


id: PBO:0048031
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fascin actin-bundling protein 2, retinal","termid":"PBO:0048031"}


id: GO:0006207
data:
  {"annotated_genes":["SJAG_00694","SJAG_03164","SJAG_00197","SJAG_00392","SJAG_00444","SJAG_00779","SJAG_05024","SJAG_00964"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[57593,70145,70407,72012,72318,73745,74360,88142],"is_not":false,"summary":null,"term":"GO:0006207"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of pyrimidine nucleobases, 1,3-diazine, organic nitrogenous bases, beginning with the synthesis of a pyrimidine ring from simpler precursors.","definition_xrefs":["GOC:mah","ISBN:0716720094"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleobase biosynthetic process","termid":"GO:0019856"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00197":null,"SJAG_00392":null,"SJAG_00444":null,"SJAG_00694":null,"SJAG_00779":null,"SJAG_00964":null,"SJAG_03164":null,"SJAG_05024":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"'de novo' pyrimidine nucleobase biosynthetic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"'de novo' pyrimidine base anabolism","type":"exact"},{"name":"'de novo' pyrimidine base biosynthesis","type":"exact"},{"name":"'de novo' pyrimidine base biosynthetic process","type":"exact"},{"name":"'de novo' pyrimidine base formation","type":"exact"},{"name":"'de novo' pyrimidine base synthesis","type":"exact"}],"termid":"GO:0006207","terms_by_termid":{"GO:0006207":null}}


id: PR:O14291
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC9E9.05 gene.","definition_xrefs":["UniProtKB:O14291","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C9E9.05 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC9E9.05","synonyms":[{"name":"Spom972h-SPAC9E9.05","type":"exact"}],"termid":"PR:O14291"}


id: FYPO:0004063
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to all or part of the cytoplasm is normal (i.e. indistinguishable from wild type) during a cellular response to salt stress.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to cytoplasm","termid":"FYPO:0001788"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000257","FYPO:0000138","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"normal protein localization to cytoplasm during cellular response to salt stress","synonyms":[{"name":"normal protein localisation to cytoplasm during cellular response to salt stress","type":"exact"},{"name":"normal protein localization to cytoplasm during cellular response to salt stress during mitotic cell cycle","type":"related"},{"name":"normal protein localization to cytoplasm during cellular response to salt stress during vegetative growth","type":"exact"},{"name":"normal protein localization to cytoplasm during salt stress","type":"exact"}],"termid":"FYPO:0004063"}


id: MONDO:0005569
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Softening and degeneration of the CARTILAGE. Pathological processes involving the chondral tissue (CARTILAGE).","definition_xrefs":["EFO:0005802"],"gene_count":0,"genotype_count":0,"name":"obsolete cartilage disease (obsolete MONDO:0005569)","secondary_identifiers":["ICD9:733.99","SCTID:50927007","MESH:D002357","DOID:1222"],"synonyms":[{"name":"cartilage disorder","type":"exact"},{"name":"cartilage tissue disease","type":"exact"},{"name":"cartilage tissue disease or disorder","type":"exact"},{"name":"chondropathy","type":"exact"},{"name":"disease of cartilage tissue","type":"exact"},{"name":"disease or disorder of cartilage tissue","type":"exact"},{"name":"disorder of cartilage tissue","type":"exact"}],"termid":"MONDO:0005569","xrefs":{"Monarch":{"xref_id":"0005569"}}}


id: PBO:0117023
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3144","termid":"PBO:0117023"}


id: PBO:0058993
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MTOR associated protein, LST8 homolog","termid":"PBO:0058993"}


id: PBO:0017064
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific protein Mug174","termid":"PBO:0017064"}


id: PBO:0060452
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-acetyl-alpha-glucosaminidase","termid":"PBO:0060452"}


id: PBO:0069510
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 778, pseudogene","termid":"PBO:0069510"}


id: PBO:0004844
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar membrane alkaline phosphatase (predicted)","termid":"PBO:0004844"}


id: PBO:0063723
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"progesterone receptor membrane component 1","termid":"PBO:0063723"}


id: GO:0032467
data:
  {"annotated_genes":["SJAG_05290","SJAG_03704","SJAG_01188","SJAG_03342","SJAG_02392","SJAG_04666","SJAG_01805","SJAG_03936","SJAG_01787","SJAG_03581","SJAG_04776","SJAG_02838","SJAG_01114","SJAG_00514","SJAG_04597","SJAG_03631","SJAG_00845","SJAG_04468","SJAG_00082"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94774,90360],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903501"},{"annotations":[87891,94775,110904,94944,113746],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903473"},{"annotations":[91131,111147,119581,104065],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903617"},{"annotations":[107418,115854,90232,105552,106758,118273,113747,78290,92783,94169],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140281"},{"annotations":[92784,87892,94778],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905758"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the division of the cytoplasm of a cell, and its separation into two daughter cells.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokinesis","termid":"GO:0032465"},{"relation_name":"is_a","term_name":"positive regulation of cell division","termid":"GO:0051781"},{"relation_name":"is_a","term_name":"positive regulation of cell cycle process","termid":"GO:0090068"},{"relation_name":"positively_regulates","term_name":"cytokinesis","termid":"GO:0000910"}],"gene_count":19,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_00514":null,"SJAG_00845":null,"SJAG_01114":null,"SJAG_01188":null,"SJAG_01787":null,"SJAG_01805":null,"SJAG_02392":null,"SJAG_02838":null,"SJAG_03342":null,"SJAG_03581":null,"SJAG_03631":null,"SJAG_03704":null,"SJAG_03936":null,"SJAG_04468":null,"SJAG_04597":null,"SJAG_04666":null,"SJAG_04776":null,"SJAG_05290":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"positive regulation of cytokinesis","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:25866389":null},"secondary_identifiers":["GO:0071777"],"synonyms":[{"name":"activation of cytokinesis","type":"narrow"},{"name":"positive regulation of cell cycle cytokinesis","type":"related"},{"name":"stimulation of cytokinesis","type":"narrow"},{"name":"up regulation of cytokinesis","type":"exact"},{"name":"up-regulation of cytokinesis","type":"exact"},{"name":"upregulation of cytokinesis","type":"exact"}],"termid":"GO:0032467","terms_by_termid":{"GO:0140281":null,"GO:1903473":null,"GO:1903501":null,"GO:1903617":null,"GO:1905758":null}}


id: PBO:0064764
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase G","termid":"PBO:0064764"}


id: PBO:0005562
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Gtr1/RagA G protein Gtr2 (predicted)","termid":"PBO:0005562"}


id: PBO:0068882
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 122, pseudogene","termid":"PBO:0068882"}


id: MONDO:0016475
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Beckwith-Wiedemann syndrome","termid":"MONDO:0007534"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"Beckwith-Wiedemann syndrome due to imprinting defect of 11p15","secondary_identifiers":["Orphanet:231117","MEDGEN:1842606","UMLS:C5680922","GARD:20600"],"synonyms":[{"name":"Beckwith-Wiedemann syndrome due to imprinting defect of type 11p15","type":"exact"}],"termid":"MONDO:0016475","xrefs":{"Monarch":{"xref_id":"0016475"}}}


id: MONDO:0008207
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Familial chondromalacia patellae is an inherited bone disorder described in 5 families in 1963 and is characterized by localized patellar pain and male-to-male transmission.","definition_xrefs":["Orphanet:1428"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chondromalacia","termid":"MONDO:0002342"},{"relation_name":"is_a","term_name":"skeletal dysplasia","termid":"MONDO:0018230"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chondromalacia patellae","secondary_identifiers":["ICD10CM:M22.4","MEDGEN:939","OMIM:168900","MESH:D046789","ICD9:717.7","DOID:13357","icd11.foundation:1589625540","SCTID:36071006","UMLS:C0008475"],"synonyms":[{"name":"chondromalacia of patella","type":"exact"},{"name":"chondromalacia patellae","type":"exact"},{"name":"familial chondromalacia patellae","type":"related"},{"name":"patella chondromalacia","type":"exact"},{"name":"patella, chondromalacia OF","type":"related"},{"name":"softening of articular cartilage of patella","type":"exact"}],"termid":"MONDO:0008207","xrefs":{"Monarch":{"xref_id":"0008207"}}}


id: GO:0050638
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + taxa-4(20),11-dien-5alpha-ol = CoA + taxa-4(20),11-dien-5alpha-yl acetate.","definition_xrefs":["RHEA:22028","EC:2.3.1.162"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-acetyltransferase activity","termid":"GO:0016413"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0016746"],"is_obsolete":false,"name":"taxadien-5-alpha-ol O-acetyltransferase activity","secondary_identifiers":["MetaCyc:2.3.1.162-RXN","KEGG_REACTION:R06307"],"synonyms":[{"name":"acetyl coenzyme A: taxa-4(20),11(12)-dien-5alpha-ol O-acetyl transferase activity","type":"related"},{"name":"acetyl coenzyme A:taxa-4(20),11(12)-dien-5-alpha-ol O-acetyl transferase activity","type":"related"},{"name":"acetyl-CoA:taxa-4(20),11-dien-5alpha-ol O-acetyltransferase activity","type":"related"},{"name":"taxa-4(20),11(12)-dien-5alpha-ol-O-acetyltransferase activity","type":"related"},{"name":"taxadien-5a-ol O-acetyltransferase activity","type":"exact"},{"name":"taxadien-5alpha-ol O-acetyltransferase activity","type":"related"},{"name":"taxadienol acetyltransferase activity","type":"related"}],"termid":"GO:0050638"}


id: GO:0045604
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of epidermal cell differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of epithelial cell differentiation","termid":"GO:0030856"},{"relation_name":"is_a","term_name":"regulation of epidermis development","termid":"GO:0045682"},{"relation_name":"regulates","term_name":"epidermal cell differentiation","termid":"GO:0009913"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of epidermal cell differentiation","synonyms":[{"name":"regulation of hypodermal cell differentiation","type":"related"}],"termid":"GO:0045604"}


id: FYPO:0003399
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of 27S ribosomal RNA precursor measured in a cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal rRNA or precursor level","termid":"FYPO:0006000"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0001312","FYPO:0001320"],"is_obsolete":false,"name":"normal 27S rRNA precursor level","synonyms":[{"name":"normal 27S rRNA precursor accumulation","type":"related"},{"name":"normal 27S rRNA precursor level during mitotic cell cycle","type":"related"},{"name":"normal 27S rRNA precursor level during vegetative growth","type":"exact"},{"name":"normal 27S rRNA precursor transcript level","type":"exact"}],"termid":"FYPO:0003399"}


id: PR:Q9UUF2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A methionine--tRNA ligase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02850","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methionine--tRNA ligase, cytoplasmic (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC17A3.04c","secondary_identifiers":["UniProtKB:Q9UUF2"],"synonyms":[{"name":"MetRS (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-metG","type":"exact"},{"name":"methionyl-tRNA synthetase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UUF2"}


id: FYPO:0003881
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of mitochondrial DNA measured in a cell is too low to detect.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"substance absent from cell during vegetative growth","termid":"FYPO:0001208"},{"relation_name":"is_a","term_name":"decreased cellular mtDNA level","termid":"FYPO:0003769"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"mtDNA absent from cell","synonyms":[{"name":"absent mtDNA","type":"exact"},{"name":"mitochondrial DNA absent from cell","type":"exact"},{"name":"mtDNA absent from cell during mitotic cell cycle","type":"related"},{"name":"mtDNA absent from cell during vegetative growth","type":"exact"}],"termid":"FYPO:0003881"}


id: GO:0062174
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of brexanolone.","definition_xrefs":["PMID:24390875"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid biosynthetic process","termid":"GO:0006694"},{"relation_name":"is_a","term_name":"ketone biosynthetic process","termid":"GO:0042181"},{"relation_name":"is_a","term_name":"brexanolone metabolic process","termid":"GO:0062173"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629","GO:0044281"],"is_obsolete":false,"name":"brexanolone biosynthetic process","synonyms":[{"name":"allopregnanolone anabolism","type":"exact"},{"name":"allopregnanolone biosynthesis","type":"exact"},{"name":"allopregnanolone biosynthetic process","type":"exact"},{"name":"allopregnanolone synthesis","type":"exact"},{"name":"allotetrahydroprogesterone anabolism","type":"exact"},{"name":"allotetrahydroprogesterone biosynthesis","type":"exact"},{"name":"allotetrahydroprogesterone biosynthetic process","type":"exact"},{"name":"allotetrahydroprogesterone synthesis","type":"exact"},{"name":"brexanolone anabolism","type":"exact"},{"name":"brexanolone biosynthesis","type":"exact"},{"name":"brexanolone synthesis","type":"exact"}],"termid":"GO:0062174"}


id: GO:0007172
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a complex capable of relaying a signal within a cell.","definition_xrefs":["GOC:signaling","PMID:9646862","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signal transduction","termid":"GO:0009966"},{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0065003","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"signal complex assembly","synonyms":[{"name":"signal complex formation","type":"exact"}],"termid":"GO:0007172"}


id: MONDO:0007511
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ectodermal dysplasia, trichoodontoonychial type is a form of ectodermal dysplasia with hair, teeth and nail involvement characterized predominantly by hypodontia, hypotrichosis, delayed hair growth and brittle nails. Additionally, focal dermal hypoplasia, irregular hyperpigmentation, hypoplastic or absent nipples, amastia, hearing impairment, congenital hip dislocation and asthma have been associated. There have been no further descriptions in the literature since 1996.","definition_xrefs":["Orphanet:1818"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ectodermal dysplasia syndrome","termid":"MONDO:0019287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"ectodermal dysplasia, trichoodontoonychial type","secondary_identifiers":["UMLS:C1851858","OMIM:129510","SCTID:734018003","GARD:2055","MEDGEN:338798","MESH:C565068"],"synonyms":[{"name":"ectodermal dysplasia trichoodontoonychial type","type":"related"},{"name":"ectodermal dysplasia, trichoodontoonychial type","type":"exact"}],"termid":"MONDO:0007511","xrefs":{"Monarch":{"xref_id":"0007511"}}}


id: FYPO:0007996
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in mitotic interphase in which cells form actin cables that are thinner than normal. This is evidence by lower actin fluorescence signal and is likely due to the presence of fewer actin filaments than normal.","definition_xrefs":["PomBase:mlr","PMID:15184402"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal actin cable morphology","termid":"FYPO:0002031"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0004803"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0004803","FYPO:0000002"],"is_obsolete":false,"name":"thin actin cables","termid":"FYPO:0007996"}


id: PBO:0012219
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sodium","termid":"PBO:0012219"}


id: PBO:0089869
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF1754 family, human FAM32A homolog, implicated in mRNA splicing","termid":"PBO:0089869"}


id: FYPO:0001042
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce a cell of normal morphology that undergoes one or two rounds of cell division, and then dies.","definition_xrefs":["PomBase:al","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable after spore germination","termid":"FYPO:0000316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000004"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000004"],"is_obsolete":false,"name":"inviable after spore germination, single or double cell division","synonyms":[{"name":"inviable following spore germination, single or double cell division","type":"exact"},{"name":"inviable germinated spore, single or double cell division","type":"exact"},{"name":"lethal after spore germination, single or double cell division","type":"exact"}],"termid":"FYPO:0001042"}


id: GO:0051415
data:
  {"annotated_genes":["SJAG_02886","SJAG_07018","SJAG_00856","SJAG_01756","SJAG_02737","SJAG_02761"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[100450,100747,101348,106821,117329,117574],"is_not":false,"summary":null,"term":"GO:0051415"}]},"cv_name":"biological_process","definition":"The 'de novo' formation of a microtubule by the interphase microtubule organizing center during interphase, the stage of cell cycle between successive rounds of chromosome segregation.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule nucleation by microtubule organizing center","termid":"GO:0051418"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00856":null,"SJAG_01756":null,"SJAG_02737":null,"SJAG_02761":null,"SJAG_02886":null,"SJAG_07018":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0000226"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0000226"},{"rel_name":"is_a","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0007010","GO:0008150","GO:0065003","GO:0044085","GO:0000226"],"is_obsolete":false,"name":"microtubule nucleation by interphase microtubule organizing center","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"IMTOC-mediated microtubule nucleation during interphase","type":"exact"},{"name":"interphase microtubule nucleation by interphase microtubule organising centre","type":"exact"},{"name":"interphase microtubule nucleation by interphase microtubule organizing center","type":"exact"},{"name":"interphase microtubule organizing center-mediated microtubule nucleation during interphase","type":"exact"},{"name":"microtubule nucleation during interphase by IMTOC","type":"exact"},{"name":"microtubule nucleation during interphase by interphase microtubule organizing center","type":"exact"}],"termid":"GO:0051415","terms_by_termid":{"GO:0051415":null}}


id: MONDO:0017104
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete central nervous system cystic malformation (obsolete MONDO:0017104)","secondary_identifiers":["Orphanet:269194"],"termid":"MONDO:0017104","xrefs":{"Monarch":{"xref_id":"0017104"}}}


id: FYPO:0004798
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the second meiotic nuclear division does not occur during a cycle of azygotic meiosis and sporulation. Azygotic meiosis and sporulation occur when meiosis takes place within a diploid cell rather than in a zygote produced by sporulation. Zygotes can resume vegetative growth and form colonies of diploid cells if returned to rich media before commitment to meiosis; under nitrogen starvation, diploid cells heterozygous for mating type will undergo azygotic meiosis. Azygotic asci have a characteristic linear morphology resembling that of a single vegetatively growing cell.","definition_xrefs":["PomBase:mah","PMID:22558440","PMID:25891897"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished meiosis II","termid":"FYPO:0003379"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0000631"],"is_obsolete":false,"name":"abolished azygotic meiosis II","synonyms":[{"name":"abolished azygotic second meiotic nuclear division","type":"exact"},{"name":"abolished meiosis II during azygotic meiosis","type":"exact"}],"termid":"FYPO:0004798"}


id: RO:0002112
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Relation between a muscle and a motor neuron that synapses to it via a type Is bouton.","direct_ancestors":[{"relation_name":"is_a","term_name":"synapsed_by","termid":"RO:0002103"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synapsed_by_via_type_Is_bouton","termid":"RO:0002112"}


id: PBO:0117001
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IER2 antisense RNA 1","termid":"PBO:0117001"}


id: PBO:0076802
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tektin 3","termid":"PBO:0076802"}


id: GO:1900483
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein targeting to vacuolar membrane.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intracellular protein transport","termid":"GO:0033157"},{"relation_name":"is_a","term_name":"regulation of protein targeting to membrane","termid":"GO:0090313"},{"relation_name":"is_a","term_name":"regulation of vacuolar transport","termid":"GO:1903335"},{"relation_name":"regulates","term_name":"protein targeting to vacuolar membrane","termid":"GO:0044395"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006605"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0006605","GO:0008150"],"is_obsolete":false,"name":"regulation of protein targeting to vacuolar membrane","termid":"GO:1900483"}


id: SO:0000650
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Cytosolic SSU rRNA is an RNA component of the small subunit of cytosolic ribosomes.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"rRNA_small_subunit_primary_transcript","termid":"SO:0000255"},{"relation_name":"is_a","term_name":"cytosolic_rRNA","termid":"SO:0002343"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytosolic_SSU_rRNA","synonyms":[{"name":"cytosolic SSU rRNA","type":"exact"},{"name":"cytosolic SSU ribosomal RNA","type":"exact"},{"name":"cytosolic small subunit rRNA","type":"exact"}],"termid":"SO:0000650"}


id: null:local:computer file
data:
  {"annotation_feature_type":"gene","cv_name":"null","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"computer file","termid":"null:local:computer file"}


id: PBO:0086683
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; identified by homology to <i>Ashbya gossypii</i>","termid":"PBO:0086683"}


id: MONDO:0030346
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"primary ciliary dyskinesia","termid":"MONDO:0016575"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ciliary dyskinesia, primary, 47, and lissencephaly","secondary_identifiers":["MEDGEN:1794161","OMIM:619466","UMLS:C5561951"],"synonyms":[{"name":"CILD47","type":"exact"},{"name":"ciliary dyskinesia, primary, 47, and lissencephaly","type":"exact"}],"termid":"MONDO:0030346","xrefs":{"Monarch":{"xref_id":"0030346"}}}


id: PBO:0075924
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ST13, Hsp70 interacting protein pseudogene 16","termid":"PBO:0075924"}


id: PBO:0088944
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding forkhead transcription factor Fhl1","termid":"PBO:0088944"}


id: MONDO:1011986
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"progressive retinal atrophy, non-human animal","termid":"MONDO:1011977"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"progressive rod-cone degeneration, non-human animal","secondary_identifiers":["OMIA:001298"],"termid":"MONDO:1011986","xrefs":{"Monarch":{"xref_id":"1011986"}}}


id: FYPO:0000534
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which spindle pole body localization is abnormal. Spindle pole body localization is the process in which a whole spindle pole body is transported to, or maintained in, a specific location.","definition_xrefs":["PomBase:mah","GO:0070631"],"direct_ancestors":[{"relation_name":"is_a","term_name":"localization phenotype during vegetative growth","termid":"FYPO:0001337"},{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000138","FYPO:0001320","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abnormal mitotic spindle pole body localization","synonyms":[{"name":"abnormal mitotic SPB localization","type":"exact"},{"name":"abnormal mitotic spindle pole body localisation","type":"exact"},{"name":"abnormal position of mitotic spindle pole body","type":"related"},{"name":"abnormal spindle pole body localization during mitotic cell cycle","type":"related"},{"name":"abnormal spindle pole body localization during vegetative growth","type":"exact"},{"name":"position of spindle pole body: abnormal","type":"related"}],"termid":"FYPO:0000534"}


id: FYECO:0000334
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which phloxine B was added to the medium or assay buffer in excess.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ phloxine B","termid":"FYECO:0000334"}


id: GO:0098532
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H3 by addition of three methyl groups to lysine at position 27 of the histone.","definition_xrefs":["PMID:19270745"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H3-K27 trimethylation (obsolete GO:0098532)","termid":"GO:0098532"}


id: MONDO:0005851
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autoimmune process characterized by the clinical triad of ophthalmoplegia, ataxia, and areflexia.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autoimmune disorder of central nervous system","termid":"MONDO:0000568"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"cerebellar disorder","termid":"MONDO:0002427"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"Miller Fisher syndrome","secondary_identifiers":["DOID:12889","MESH:D019846","Orphanet:98919","EFO:0007371","GARD:3668","NCIT:C116958","SCTID:1767005","UMLS:C0393799","icd11.foundation:134795253","MedDRA:10049567","MEDGEN:95994"],"synonyms":[{"name":"Fisher syndrome","type":"exact"},{"name":"Fisher's syndrome","type":"exact"},{"name":"Guillain Barre syndrome, Miller Fisher variant","type":"exact"},{"name":"Guillain-Barre syndrome, Miller Fisher variant","type":"exact"},{"name":"Miller Fisher variant of Guillain Barre syndrome","type":"exact"},{"name":"Miller-Fisher syndrome","type":"exact"},{"name":"Miller-Fisher variant of Guillain-Barre syndrome","type":"exact"},{"name":"cranial variant of GBS","type":"exact"},{"name":"cranial variant of Guillain-Barre syndrome","type":"exact"},{"name":"cranial variant of Guillain-Barré syndrome","type":"exact"},{"name":"ophthalmoplegia, ataxia and areflexia syndrome","type":"exact"},{"name":"syndrome, Fisher","type":"exact"},{"name":"syndrome, Miller Fisher","type":"exact"},{"name":"syndrome, Miller-Fisher","type":"exact"}],"termid":"MONDO:0005851","xrefs":{"Monarch":{"xref_id":"0005851"}}}


id: PBO:0056288
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MANEAL pseudogene 1","termid":"PBO:0056288"}


id: GO:1901338
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to catecholamine.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"binding","termid":"GO:0005488"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"catecholamine binding","termid":"GO:1901338"}


id: PBO:0057660
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1252","termid":"PBO:0057660"}


id: MONDO:0008504
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"SupraValvar Aortic Stenosis (SVAS) is characterized by the narrowing of the aorta lumen (close to its origin) or other arteries (branch pulmonary arteries, coronary arteries). This narrowing of the aorta or pulmonary branches may impede blood flow, resulting in heart murmur and ventricular hypertrophy (in case of aorta involvement). The narrowing results from a thickening of the artery wall, which is not related to atherosclerosis.","definition_xrefs":["Orphanet:3193"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aortic valve stenosis","termid":"MONDO:0042981"},{"relation_name":"is_a","term_name":"cardiogenetic disease","termid":"MONDO:0100547"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"supravalvular aortic stenosis","secondary_identifiers":["UMLS:C0003499","MedDRA:10042598","HP:0004381","GARD:743","DOID:1929","icd11.foundation:1066595728","SCTID:268185002","MEDGEN:2001","NANDO:2200285","NCIT:C85176","OMIM:185500"],"synonyms":[{"name":"SVAS","type":"exact"},{"name":"aortic supravalvular stenosis","type":"related"},{"name":"supra-valvular aortic stenosis","type":"exact"},{"name":"supravalvar aortic stenosis","type":"exact"},{"name":"supravalvar aortic stenosis, Eisenberg type","type":"related"},{"name":"supravalvular aortic stenosis","type":"exact"},{"name":"supravalvular aortic stenosis (disease)","type":"exact"}],"termid":"MONDO:0008504","xrefs":{"Monarch":{"xref_id":"0008504"}}}


id: PBO:0051440
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable 3-25","termid":"PBO:0051440"}


id: MONDO:0011261
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A spondyloepiphyseal dysplasia characterized by spondyloepiphyseal dysplasia, craniosynostosis, cataracts, cleft palate and intellectual deficit. This is an n-of-1 use case where only one patient or family has been described with this disorder.","definition_xrefs":["Orphanet:163649"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"spondyloepiphyseal dysplasia","termid":"MONDO:0016761"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"spondyloepiphyseal dysplasia with coronal craniosynostosis, cataracts, cleft palate, and intellectual disability","secondary_identifiers":["UMLS:C1865134","DOID:0112294","MEDGEN:355919","GARD:16993","MESH:C566515","OMIM:602611","SCTID:718766002"],"synonyms":[{"name":"spondyloepiphyseal dysplasia with coronal craniosynostosis, cataracts, cleft palate, and intellectual disability","type":"exact"},{"name":"spondyloepiphyseal dysplasia with coronal craniosynostosis, cataracts, cleft palate, and mental retardation","type":"exact"},{"name":"spondyloepiphyseal dysplasia-craniosynostosis-cleft palate-cataract-intellectual disability syndrome","type":"exact"}],"termid":"MONDO:0011261","xrefs":{"Monarch":{"xref_id":"0011261"}}}


id: MONDO:0011593
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"benign familial infantile epilepsy","termid":"MONDO:0017615"},{"relation_name":"is_a","term_name":"PRRT2-associated paroxysmal movement disorder","termid":"MONDO:0100556"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"seizures, benign familial infantile, 2","secondary_identifiers":["MEDGEN:381313","GARD:16504","DOID:0081115","UMLS:C1853995","OMIM:605751","MESH:C565296"],"synonyms":[{"name":"BFIS2","type":"related"},{"name":"convulsions, benign familial infantile, 2","type":"related"},{"name":"seizures, benign familial infantile, 2","type":"exact"},{"name":"seizures, benign familial infantile, type 2","type":"exact"}],"termid":"MONDO:0011593","xrefs":{"Monarch":{"xref_id":"0011593"}}}


id: PBO:0064531
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase III subunit H","termid":"PBO:0064531"}


id: PBO:0055887
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 8 VRAC subunit D","termid":"PBO:0055887"}


id: PBO:0063610
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PFDN1 pseudogene 1","termid":"PBO:0063610"}


id: MONDO:0026771
data:
  {"annotated_genes":["SJAG_01831"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86262],"is_not":false,"summary":null,"term":"MONDO:0026771"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"developmental and epileptic encephalopathy","termid":"MONDO:0100062"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01831":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"},{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0005027","MONDO:0700092"],"is_obsolete":false,"name":"developmental and epileptic encephalopathy, 85, with or without midline brain defects","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C5393312","OMIM:301044","DOID:0070380","MEDGEN:1708832"],"synonyms":[{"name":"DEE85, with or without midline brain defects","type":"exact"},{"name":"EIEE85","type":"exact"},{"name":"developmental and epileptic encephalopathy 85, with or without midline brain defects, X-linked dominant","type":"exact"},{"name":"epileptic encephalopathy, early infantile, 85, with or without midline brain defects","type":"exact"}],"termid":"MONDO:0026771","terms_by_termid":{"MONDO:0026771":null},"xrefs":{"Monarch":{"xref_id":"0026771"}}}


id: MONDO:0005963
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A condition resulting from infection with the second stage larvae of the parasite Spirometra.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Cestode infectious disease","termid":"MONDO:0042488"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sparganosis","secondary_identifiers":["ICD9:123.5","MEDGEN:52426","NCIT:C35030","UMLS:C0037753","icd11.foundation:22873958","MESH:D013031","DOID:10080","SCTID:31659000","ICD10CM:B70.1","EFO:0007488"],"synonyms":[{"name":"Spirometra caused disease or disorder","type":"exact"},{"name":"Spirometra disease or disorder","type":"exact"},{"name":"Spirometra infectious disease","type":"exact"},{"name":"infection by sparganum","type":"exact"},{"name":"sparganosis [larval diphyllobothriasis]","type":"exact"}],"termid":"MONDO:0005963","xrefs":{"Monarch":{"xref_id":"0005963"}}}


id: GO:0031261
data:
  {"annotated_genes":["SJAG_05301","SJAG_01762","SJAG_00536","SJAG_03451","SJAG_02394","SJAG_04210","SJAG_00884","SJAG_00327","SJAG_02800","SJAG_02667","SJAG_00696","SJAG_04341","SJAG_00857","SJAG_03927","SJAG_02348","SJAG_01354","SJAG_01267","SJAG_04995","SJAG_02098","SJAG_01624","SJAG_00874"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[57179,58464,61157,61381,62849,66346,72428,74168,77375,78549,94298,108200,108420,111763,112020,113553,113943],"is_not":false,"summary":null,"term":"GO:0031261"},{"annotations":[79583,80685,80350,70732],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000811"}]},"cv_name":"cellular_component","definition":"A protein-DNA complex assembled at eukaryotic DNA replication origins immediately prior to the initiation of DNA replication. The preinitiation complex is formed by the assembly of additional proteins onto an existing prereplicative complex. In budding yeast, the additional proteins might include Cdc45p, Sld2p, Sld3p, Dpb11p, DNA polymerases, and others; in fission yeast the GINS complex is present.","definition_xrefs":["PMID:17230184","GOC:bf","PMID:12694535","PMID:15194812","GOC:jl","GOC:hjd","GOC:vw","GOC:pr","GOC:rb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-DNA complex","termid":"GO:0032993"},{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"},{"relation_name":"part_of","term_name":"nucleoplasm","termid":"GO:0005654"}],"gene_count":21,"genes_by_uniquename":{"SJAG_00327":null,"SJAG_00536":null,"SJAG_00696":null,"SJAG_00857":null,"SJAG_00874":null,"SJAG_00884":null,"SJAG_01267":null,"SJAG_01354":null,"SJAG_01624":null,"SJAG_01762":null,"SJAG_02098":null,"SJAG_02348":null,"SJAG_02394":null,"SJAG_02667":null,"SJAG_02800":null,"SJAG_03451":null,"SJAG_03927":null,"SJAG_04210":null,"SJAG_04341":null,"SJAG_04995":null,"SJAG_05301":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005654"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005575","GO:0005654","GO:0032991","GO:0005634"],"is_obsolete":false,"name":"DNA replication preinitiation complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"pre-IC","type":"exact"}],"termid":"GO:0031261","terms_by_termid":{"GO:0000811":null,"GO:0031261":null}}


id: PBO:0044953
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deoxyhypusine synthase","termid":"PBO:0044953"}


id: GO:0039714
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A viral factory located in the cytoplasm of a host cell.","definition_xrefs":["VZ:1951"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell cytoplasm part","termid":"GO:0033655"},{"relation_name":"is_a","term_name":"viral factory","termid":"GO:0039713"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"cytoplasmic viral factory","termid":"GO:0039714"}


id: MONDO:1010413
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Epilepsy that occurs in horse.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epilepsy, non-human animal","termid":"MONDO:1010001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epilepsy, horse","secondary_identifiers":["OMIA:000344-9796"],"termid":"MONDO:1010413","xrefs":{"Monarch":{"xref_id":"1010413"}}}


id: PBO:0071493
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L32 pseudogene 34","termid":"PBO:0071493"}


id: FYPO:0003686
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which formation of the mature 3' end of a box C/D snoRNA molecule is abnormal.","definition_xrefs":["GO:0034472","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal RNA 3'-end processing","termid":"FYPO:0007918"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000294","FYPO:0001320","FYPO:0006551","FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abnormal box C/D snoRNA 3'-end processing","synonyms":[{"name":"abnormal box C/D snoRNA 3'-end processing during mitotic cell cycle","type":"related"},{"name":"abnormal box C/D snoRNA 3'-end processing during vegetative growth","type":"exact"}],"termid":"FYPO:0003686"}


id: PBO:0030214
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cellular_response_to_nutrient","termid":"PBO:0030214"}


id: PBO:0036379
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitofusin, mitochondrial dynamin family fusion GTPase protein (predicted)","termid":"PBO:0036379"}


id: PBO:0082083
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5-oxoprolinase; enzyme is ATP-dependent and functions as a dimer; similar to mouse Oplah gene; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm; protein abundance increases in response to DNA replication stress","termid":"PBO:0082083"}


id: MONDO:0020671
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete susceptibility to ischemic stroke (obsolete MONDO:0020671)","secondary_identifiers":["OMIM:601367"],"synonyms":[{"name":"cerebral infarction","type":"related"},{"name":"cerebral infarction, susceptibility to","type":"exact"},{"name":"cerebrovascular accident","type":"related"},{"name":"ischemic stroke, susceptibility to","type":"exact"},{"name":"stroke, ischemic","type":"related"},{"name":"stroke, ischemic, susceptibility to","type":"exact"},{"name":"stroke, susceptibility to","type":"exact"}],"termid":"MONDO:0020671","xrefs":{"Monarch":{"xref_id":"0020671"}}}


id: GO:0036310
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"An ATP-dependent activity that facilitates the formation of a complementary double-stranded DNA molecule.","definition_xrefs":["PMID:21078962","PMID:22705370","PMID:22704558","PMID:22759634","PMID:22888405"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ATP-dependent activity, acting on DNA","termid":"GO:0008094"},{"relation_name":"is_a","term_name":"DNA/DNA annealing activity","termid":"GO:1990814"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003677"}],"interesting_parent_ids":["GO:0003824","GO:0003677","GO:0003674","GO:0140097","GO:0005488","GO:0016853"],"is_obsolete":false,"name":"ATP-dependent DNA/DNA annealing activity","synonyms":[{"name":"ATP-dependent DNA annealing activity","type":"related"},{"name":"DNA rewinding activity","type":"related"},{"name":"annealing helicase activity","type":"related"},{"name":"nucleoside-triphosphatase activity involved in DNA annealing","type":"exact"}],"termid":"GO:0036310"}


id: MONDO:0018737
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"antiphospholipid syndrome","termid":"MONDO:8000010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"catastrophic antiphospholipid syndrome","secondary_identifiers":["NANDO:1200270","MEDGEN:783641","GARD:9820","ICD9:289.81","Orphanet:464343","SCTID:609329007","UMLS:C3662487"],"synonyms":[{"name":"CAPS","type":"exact"},{"name":"caps","type":"exact"},{"name":"catastrophic APS","type":"exact"}],"termid":"MONDO:0018737","xrefs":{"Monarch":{"xref_id":"0018737"}}}


id: MONDO:0016677
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenital abnormalities caused by medicinal substances or drugs of abuse given to or taken by the mother, or to which she is inadvertently exposed during the manufacture of such substances. The concept excludes abnormalities resulting from exposure to non-medicinal chemicals in the environment.","definition_xrefs":["MESH:D000014"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental defect during embryogenesis","termid":"MONDO:0019755"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"toxic or drug-related embryofetopathy","secondary_identifiers":["UMLS:C5680710","icd11.foundation:293076727","MEDGEN:1843068","Orphanet:251529"],"termid":"MONDO:0016677","xrefs":{"Monarch":{"xref_id":"0016677"}}}


id: PBO:0004068
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Clr6 histone deacetylase complex subunit Pst1","termid":"PBO:0004068"}


id: PBO:0071088
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 90","termid":"PBO:0071088"}


id: GO:0015355
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the movement of a monocarboxylate, any compound containing a single carboxyl group (COOH or COO-), by uniport, symport or antiport across a membrane by a carrier-mediated mechanism.","definition_xrefs":["GOC:jl","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid transmembrane transporter activity","termid":"GO:0008028"},{"relation_name":"is_a","term_name":"secondary active transmembrane transporter activity","termid":"GO:0015291"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"secondary active monocarboxylate transmembrane transporter activity","synonyms":[{"name":"monocarboxylate porter activity","type":"related"}],"termid":"GO:0015355"}


id: GO:0034789
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2-hydroxy-6-oxo-6-(2-carboxyphenyl)-hexa-2,4-dienoate + H2O = cis-2-hydroxypenta-2,4-dienoate + phthalate + H+.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 2-hydroxy-6-oxo-6-(2-carboxyphenyl)-hexa-2,4-dienoate hydrolase activity (obsolete GO:0034789)","termid":"GO:0034789"}


id: PBO:0026819
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-elongated_vegetative_cell_with_central_constriction","termid":"PBO:0026819"}


id: MONDO:0015214
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete syndromic visceral malformation (obsolete MONDO:0015214)","secondary_identifiers":["Orphanet:108973"],"termid":"MONDO:0015214","xrefs":{"Monarch":{"xref_id":"0015214"}}}


id: MONDO:0004118
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A reactive inflammatory disorder affecting the bladder. It is characterized by the development of small cysts in the bladder wall. The cysts are lined by urothelial cells.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cystitis","termid":"MONDO:0006032"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cystitis cystica","secondary_identifiers":["SCTID:13285005","MEDGEN:472898","UMLS:C0152262","DOID:7138","ICD9:595.81","NCIT:C96230"],"termid":"MONDO:0004118","xrefs":{"Monarch":{"xref_id":"0004118"}}}


id: PBO:0060264
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MYG1 exonuclease","termid":"PBO:0060264"}


id: MOD:00616
data:
  {"annotated_genes":["SJAG_03524","SJAG_03012","SJAG_02592","SJAG_02980","SJAG_02763","SJAG_03632","SJAG_02902"],"annotation_feature_type":"gene","cv_annotations":{"PSI-MOD":[{"annotations":[119493,80835,119709,119706,119708,119492,80836,119707],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MOD:00046"},{"annotations":[81130,81129,80870,81031],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MOD:01154"}]},"cv_name":"PSI-MOD","definition":"Natural or modified residues that are isobaric at a resolution below 0.1 Da.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification categorized by isobaric sets","termid":"MOD:00538"}],"gene_count":7,"genes_by_uniquename":{"SJAG_02592":null,"SJAG_02763":null,"SJAG_02902":null,"SJAG_02980":null,"SJAG_03012":null,"SJAG_03524":null,"SJAG_03632":null},"genotype_count":0,"is_obsolete":false,"name":"residues isobaric at a resolution below 0.1 Da","references_by_uniquename":{"PMID:26774782":null,"PMID:31150379":null,"PMID:36408920":null},"termid":"MOD:00616","terms_by_termid":{"GO:0034599":null,"GO:0034605":null,"GO:0071475":null,"GO:1904547":null,"MOD:00046":null,"MOD:01154":null}}


id: GO:0046720
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The controlled release of citric acid, 2-hydroxy-1,2,3-propanetricarboxylic acid, by a cell or a tissue.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"citrate transport","termid":"GO:0015746"},{"relation_name":"is_a","term_name":"acid secretion","termid":"GO:0046717"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"citric acid secretion","synonyms":[{"name":"citrate secretion","type":"exact"}],"termid":"GO:0046720"}


id: GO:0018686
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2 6-hydroxypseudooxynicotine + O2 = 2 2,6-dihydroxypseudooxynicotine.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 6-hydroxy pseudo-oxynicotine monooxygenase activity (obsolete GO:0018686)","termid":"GO:0018686"}


id: GO:0046064
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of dCMP, deoxycytidine monophosphate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine deoxyribonucleoside monophosphate biosynthetic process","termid":"GO:0009177"},{"relation_name":"is_a","term_name":"pyrimidine deoxyribonucleotide biosynthetic process","termid":"GO:0009221"},{"relation_name":"is_a","term_name":"dCMP metabolic process","termid":"GO:0046063"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"dCMP biosynthetic process","synonyms":[{"name":"dCMP anabolism","type":"exact"},{"name":"dCMP biosynthesis","type":"exact"},{"name":"dCMP formation","type":"exact"},{"name":"dCMP synthesis","type":"exact"}],"termid":"GO:0046064"}


id: MONDO:0100494
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autosomal dominant form of TTN-related myopathy.","definition_xrefs":["MONDO:patterns/autosomal_dominant"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"TTN-related myopathy","termid":"MONDO:0100175"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0005336","MONDO:0000426"],"is_obsolete":false,"name":"autosomal dominant titinopathy","synonyms":[{"name":"TTN-related myopathy, autosomal dominant","type":"exact"}],"termid":"MONDO:0100494","xrefs":{"Monarch":{"xref_id":"0100494"}}}


id: GO:0009919
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The division of a cell into two daughter cells with cell walls.","definition_xrefs":["GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete cytokinesis (sensu Viridiplantae) (obsolete GO:0009919)","synonyms":[{"name":"cytokinesis (sensu Viridiplantae)","type":"exact"}],"termid":"GO:0009919"}


id: MONDO:0011127
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Bartter disease type 1 (obsolete MONDO:0011127)","termid":"MONDO:0011127","xrefs":{"Monarch":{"xref_id":"0011127"}}}


id: GO:0007203
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete phosphatidylinositol-4,5-bisphosphate hydrolysis (obsolete GO:0007203)","synonyms":[{"name":"phosphatidylinositol-4,5-bisphosphate hydrolysis","type":"exact"}],"termid":"GO:0007203"}


id: PBO:0056645
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit 15 pseudogene 6","termid":"PBO:0056645"}


id: GO:0038137
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals transmitted by a heterodimeric complex of the tyrosine kinase receptors EGFR (epidermal growth factor receptor/ERBB1) and ERBB4. The pathway begins with binding of a ligand to either cell surface receptor, or the dimeric receptor complex, and ends with regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["PMID:16460914","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epidermal growth factor receptor signaling pathway","termid":"GO:0007173"},{"relation_name":"is_a","term_name":"ERBB4 signaling pathway","termid":"GO:0038130"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"ERBB4-EGFR signaling pathway","synonyms":[{"name":"ERBB1-ERBB4 signaling pathway","type":"exact"},{"name":"ERBB4-EGFR signalling pathway","type":"exact"},{"name":"HER1-HER4 signaling pathway","type":"exact"}],"termid":"GO:0038137"}


id: GO:0017046
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a peptide with hormonal activity in animals.","definition_xrefs":["ISBN:0198506732","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amide binding","termid":"GO:0033218"},{"relation_name":"is_a","term_name":"hormone binding","termid":"GO:0042562"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"peptide hormone binding","synonyms":[{"name":"polypeptide hormone binding","type":"exact"}],"termid":"GO:0017046"}


id: PBO:0028644
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_dehydrodolichyl_diphosphate_synthase_activity","termid":"PBO:0028644"}


id: PBO:0069063
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 310, pseudogene","termid":"PBO:0069063"}


id: GO:0140938
data:
  {"annotated_genes":["SJAG_04574","SJAG_00769","SJAG_02873","SJAG_03487","SJAG_01193"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[95846],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140954"},{"annotations":[78964],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046975"},{"annotations":[64488],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140955"},{"annotations":[58214],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0062122"},{"annotations":[78963],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042800"},{"annotations":[58726],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140999"},{"annotations":[110874],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140948"},{"annotations":[63106],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140949"},{"annotations":[110876],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140947"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + a histone H3 = S-adenosyl-L-homocysteine + a methylated histone H3. Histone methylation generally occurs on either an arginine or a lysine residue.","definition_xrefs":["PMID:28450737"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone methyltransferase activity","termid":"GO:0042054"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00769":null,"SJAG_01193":null,"SJAG_02873":null,"SJAG_03487":null,"SJAG_04574":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0008276"}],"interesting_parent_ids":["GO:0016740","GO:0016741","GO:0003674","GO:0003824","GO:0008276","GO:0140096"],"is_obsolete":false,"name":"histone H3 methyltransferase activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000003":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-5205799","Reactome:R-HSA-5244692","Reactome:R-HSA-5661117","Reactome:R-HSA-5159245","Reactome:R-HSA-5634802","Reactome:R-HSA-8936584","Reactome:R-HSA-5634750","Reactome:R-HSA-5649802","Reactome:R-HSA-5638141","Reactome:R-HSA-5649764","Reactome:R-HSA-4827383","Reactome:R-HSA-5634729","Reactome:R-HSA-3788745","Reactome:R-HSA-3788748","Reactome:R-HSA-5649800","Reactome:R-HSA-5638332","Reactome:R-HSA-5638333","Reactome:R-HSA-5649801","Reactome:R-HSA-5637686","Reactome:R-HSA-8936608","Reactome:R-HSA-5638157","Reactome:R-HSA-8937113","Reactome:R-HSA-9842833","Reactome:R-HSA-9844006","Reactome:R-HSA-5649799","Reactome:R-HSA-9844057","Reactome:R-HSA-4827382","Reactome:R-HSA-8937022"],"synonyms":[{"name":"histone H3 methylase activity","type":"exact"},{"name":"histone H3 methylation","type":"related"}],"termid":"GO:0140938","terms_by_termid":{"GO:0042800":null,"GO:0046975":null,"GO:0062122":null,"GO:0140947":null,"GO:0140948":null,"GO:0140949":null,"GO:0140954":null,"GO:0140955":null,"GO:0140999":null}}


