# terms

id: PBO:0017839
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial Mpv17/PMP22 family protein 1 (predicted)","termid":"PBO:0017839"}


id: FYPO:0003160
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a cell is elongated, i.e. has a greater length and length:diameter ratio than normal, when the cell is in a culture in stationary phase.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"elongated cell","termid":"FYPO:0000017"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000005","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"elongated cell during stationary phase","synonyms":[{"name":"long cell during stationary phase","type":"exact"}],"termid":"FYPO:0003160"}


id: PBO:0075027
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 115-38","termid":"PBO:0075027"}


id: MONDO:0850150
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A kidney disease that is located in the kidney cortex.","definition_xrefs":["DOID:0080616"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kidney disorder","termid":"MONDO:0005240"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"kidney cortex disease","termid":"MONDO:0850150","xrefs":{"Monarch":{"xref_id":"0850150"}}}


id: MONDO:0013235
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any familial pancreatic carcinoma in which the cause of the disease is a mutation in the BRCA2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"familial pancreatic carcinoma","termid":"MONDO:0015278"},{"relation_name":"is_a","term_name":"BRCA2-related cancer predisposition","termid":"MONDO:0700269"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pancreatic cancer, susceptibility to, 2","secondary_identifiers":["MEDGEN:461896","OMIM:613347","UMLS:C3150546"],"synonyms":[{"name":"BRCA2 familial pancreatic carcinoma","type":"exact"},{"name":"Pnca2","type":"related"},{"name":"familial pancreatic carcinoma caused by mutation in BRCA2","type":"exact"},{"name":"pancreatic cancer 2","type":"exact"},{"name":"pancreatic cancer, susceptibility to, 2","type":"exact"},{"name":"pancreatic cancer, susceptibility to, type 2","type":"exact"},{"name":"susceptibility to pancreatic cancer 2","type":"related"}],"termid":"MONDO:0013235","xrefs":{"Monarch":{"xref_id":"0013235"}}}


id: FYPO:0007385
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the binding of one protein to another occurs for a longer time than normal. The relevant proteins may include the one encoded by the mutated gene, or may both be encoded by different genes.","definition_xrefs":["PomBase:mah","PMID:28366743"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein-protein interaction","termid":"FYPO:0000704"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000702"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000702","FYPO:0000707","FYPO:0000652"],"is_obsolete":false,"name":"increased duration of protein-protein interaction","synonyms":[{"name":"increased duration of protein binding","type":"exact"}],"termid":"FYPO:0007385"}


id: MONDO:0020644
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare non-Hodgkin lymphoma that arises in and is confined to the lung at the time of diagnosis. Representative examples include bronchial mucosa-associated lymphoid tissue lymphoma and diffuse large B-cell lymphoma.","definition_xrefs":["NCIT:C5684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lung lymphoma","termid":"MONDO:0003987"},{"relation_name":"is_a","term_name":"non-Hodgkin lymphoma","termid":"MONDO:0018908"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005570"],"is_obsolete":false,"name":"lung non-Hodgkin lymphoma","secondary_identifiers":["MEDGEN:235267","UMLS:C1334453"],"synonyms":[{"name":"lung non-Hodgkin lymphoma","type":"exact"},{"name":"lung non-Hodgkin's lymphoma","type":"exact"},{"name":"non-Hodgkin lymphoma of lung","type":"exact"},{"name":"primary lung non-Hodgkin's lymphoma","type":"exact"}],"termid":"MONDO:0020644","xrefs":{"Monarch":{"xref_id":"0020644"}}}


id: PBO:0080473
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vesicle transport through interaction with t-SNAREs 1B pseudogene 4","termid":"PBO:0080473"}


id: PBO:0000939
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CHCH domain","termid":"PBO:0000939"}


id: PBO:0084499
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Meiosis-specific protein required for chromosome synapsis; displays Red1p dependent localization to the unsynapsed axial-lateral elements of the synaptonemal complex; required for chiasma formation; in vitro, displays the ability to promote intra- and intermolecular synapsis between double-stranded DNA molecules and to fold DNA into rigid protein-DNA filaments","termid":"PBO:0084499"}


id: SO:0000373
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A recombinationally rearranged gene by inversion.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"inversion","termid":"SO:1000036"},{"relation_name":"is_a","term_name":"recombinationally_rearranged_gene","termid":"SO:0000456"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"recombinationally_inverted_gene","synonyms":[{"name":"recombinationally inverted gene","type":"exact"}],"termid":"SO:0000373"}


id: MONDO:0009307
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"chronic granulomatous disease","termid":"MONDO:0018305"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"granulomatous disease with defect in neutrophil chemotaxis","secondary_identifiers":["OMIM:233670","MEDGEN:383873","MESH:C565534","UMLS:C1856261"],"synonyms":[{"name":"granulomatous disease with defect in neutrophil chemotaxis","type":"exact"}],"termid":"MONDO:0009307","xrefs":{"Monarch":{"xref_id":"0009307"}}}


id: PBO:0055514
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2948","termid":"PBO:0055514"}


id: PBO:0053356
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 260","termid":"PBO:0053356"}


id: PR:Q9USZ4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rpa34 gene.","definition_xrefs":["UniProtKB:Q9USZ4","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-directed RNA polymerase I subunit rpa34 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC11G11.05","synonyms":[{"name":"RNA polymerase I subunit A34 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-rpa34","type":"exact"}],"termid":"PR:Q9USZ4"}


id: PBO:0028010
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_meiotic_telomere_clustering","termid":"PBO:0028010"}


id: GO:0052586
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of an oxidation-reduction (redox) reaction in which a nitrogenous group, excluding NH and NH2 groups, acts as a hydrogen or electron donor and reduces a quinone or similar compound.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete oxidoreductase activity, acting on other nitrogenous compounds as donors, with a quinone or similar compound as acceptor (obsolete GO:0052586)","termid":"GO:0052586"}


id: FYPO:0001343
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which DNA replication is abnormal in the vegetative growth phase of the life cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal DNA replication","termid":"FYPO:0000217"},{"relation_name":"is_a","term_name":"DNA metabolism phenotype during vegetative growth","termid":"FYPO:0001346"},{"relation_name":"is_a","term_name":"abnormal metabolic process during vegetative growth","termid":"FYPO:0001363"},{"relation_name":"is_a","term_name":"abnormal mitotic cell cycle process","termid":"FYPO:0002737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0000293","FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"abnormal mitotic DNA replication","synonyms":[{"name":"abnormal DNA replication during mitotic cell cycle","type":"exact"},{"name":"abnormal DNA replication during vegetative growth","type":"exact"},{"name":"abnormal DNA-dependent DNA replication during vegetative growth","type":"exact"}],"termid":"FYPO:0001343"}


id: PBO:0041293
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C2 antisense RNA 1","termid":"PBO:0041293"}


id: MONDO:0002860
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant mesenchymal tumor with skeletal muscle differentiation affecting the testis.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"testis sarcoma","termid":"MONDO:0002861"},{"relation_name":"is_a","term_name":"rhabdomyosarcoma","termid":"MONDO:0005212"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"testis rhabdomyosarcoma","secondary_identifiers":["UMLS:C1336726","MEDGEN:234942","NCIT:C6378","DOID:4061"],"synonyms":[{"name":"rhabdomyosarcoma (disease) of testis","type":"exact"},{"name":"rhabdomyosarcoma of testis","type":"exact"},{"name":"rhabdomyosarcoma of the testis","type":"exact"},{"name":"testicular rhabdomyosarcoma","type":"exact"},{"name":"testis rhabdomyosarcoma (disease)","type":"exact"}],"termid":"MONDO:0002860","xrefs":{"Monarch":{"xref_id":"0002860"}}}


id: FYPO:0000024
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which the cell diameter is larger than normal and the cell length is shorter than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"increased cell diameter","termid":"FYPO:0006615"},{"relation_name":"is_a","term_name":"abnormal vegetative cell shape","termid":"FYPO:0002196"},{"relation_name":"is_a","term_name":"increased cell diameter","termid":"FYPO:0006615"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0000005"],"is_obsolete":false,"name":"stubby vegetative cell","synonyms":[{"name":"cell morphology, stubby cells","type":"exact"},{"name":"stubby cell during mitotic cell cycle","type":"related"},{"name":"stubby cell during vegetative growth","type":"exact"},{"name":"watermelon-shaped vegetative cell","type":"exact"}],"termid":"FYPO:0000024"}


id: PBO:0015707
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U5 snRNP-associated ATP-dependent RNA helicase Prp28 (predicted)","termid":"PBO:0015707"}


id: MONDO:0003903
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A non-metastasizing, well circumscribed neoplasm that arises from the vagina and is characterized by the presence of a predominant benign mesenchymal component and benign glandular or squamous epithelial cells.","definition_xrefs":["NCIT:C40280"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benign vaginal mixed epithelial and mesenchymal neoplasm","termid":"MONDO:0001731"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benign vaginal mixed tumor","secondary_identifiers":["MEDGEN:267350","DOID:6505","UMLS:C1511107"],"synonyms":[{"name":"benign vaginal mixed tumor","type":"exact"},{"name":"vaginal spindle cell epithelioma","type":"exact"}],"termid":"MONDO:0003903","xrefs":{"Monarch":{"xref_id":"0003903"}}}


id: PBO:0071747
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L41 pseudogene 3","termid":"PBO:0071747"}


id: MONDO:0014495
data:
  {"annotated_genes":["SJAG_02623"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87061],"is_not":false,"summary":null,"term":"MONDO:0014495"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02623":null},"genotype_count":0,"is_obsolete":false,"name":"retinitis pigmentosa-juvenile cataract-short stature-intellectual disability syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C4015242","Orphanet:436245","GARD:17730","OMIM:616108","MEDGEN:863679"],"synonyms":[{"name":"RDJCSS","type":"related"},{"name":"retinal dystrophy, juvenile cataracts, and short stature syndrome","type":"related"},{"name":"retinal dystrophy-juvenile cataract-short stature syndrome","type":"exact"}],"termid":"MONDO:0014495","terms_by_termid":{"MONDO:0014495":null},"xrefs":{"Monarch":{"xref_id":"0014495"}}}


id: PBO:0074873
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 56","termid":"PBO:0074873"}


id: PBO:0030724
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_membrane_organization","termid":"PBO:0030724"}


id: PBO:0029815
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_vegetative_cell_population_after_spore_germination,_single_or_double_cell_division,_abnormal_cell_shape_(obsolete_FYPO:0002422)","termid":"PBO:0029815"}


id: MONDO:1010297
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Osteoarthritis that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inflammatory disease, non-human animal","termid":"MONDO:1011327"},{"relation_name":"is_a","term_name":"musculoskeletal system disorder, non-human animal","termid":"MONDO:1011335"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"osteoarthritis, non-human animal","secondary_identifiers":["OMIA:000747"],"termid":"MONDO:1010297","xrefs":{"Monarch":{"xref_id":"1010297"}}}


id: PR:O74741
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An uncharacterized protein YgiD that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02730"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4,5-DOPA dioxygenase extradiol-like protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1709.16c","secondary_identifiers":["UniProtKB:O74741"],"synonyms":[{"name":"Spom972h-ygiD","type":"exact"}],"termid":"PR:O74741"}


id: PBO:0043372
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"clustered mitochondria homolog pseudogene 2","termid":"PBO:0043372"}


id: MONDO:0023368
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cleft palate, micrognathia, Wormian bones, congenital heart disease, dislocated hips, absent tibiae, bowed fibulae, preaxial polydactyly of the feet","definition_xrefs":["GARD:0001266"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ho-Kaufman-McAlister syndrome","secondary_identifiers":["MEDGEN:419170","MESH:C538325","UMLS:C2931819"],"synonyms":[{"name":"Ho Kaufman McAlister syndrome","type":"related"},{"name":"cleft palate, micrognathia, Wormian bones, congenital heart disease, dislocated hips, absent tibiae, bowed fibulae, preaxial polydactyly of the feet","type":"related"}],"termid":"MONDO:0023368","xrefs":{"Monarch":{"xref_id":"0023368"}}}


id: PBO:0058118
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4421","termid":"PBO:0058118"}


id: MONDO:1011356
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Sensory ganglionopathy that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder, non-human animal","termid":"MONDO:1011336"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sensory ganglionopathy, non-human animal","termid":"MONDO:1011356","xrefs":{"Monarch":{"xref_id":"1011356"}}}


id: GO:0090560
data:
  {"annotated_genes":["SJAG_04085","SJAG_01058"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[66768,68543],"is_not":false,"summary":null,"term":"GO:0090560"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction S-adenosyl-L-methionine + L-histidine-[translation elongation factor 2] = S-methyl-5-thioadenosine + 2-[(3S)-3-amino-3-carboxypropyl]-L-histidine-[translation elongation factor 2].","definition_xrefs":["PMID:15485916","RHEA:36783","GOC:pde"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring alkyl or aryl (other than methyl) groups","termid":"GO:0016765"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01058":null,"SJAG_04085":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016765","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"2-(3-amino-3-carboxypropyl)histidine synthase activity","references_by_uniquename":{"GO_REF:0000003":null},"secondary_identifiers":["Reactome:R-HSA-5358494","EC:2.5.1.108","MetaCyc:RXN-11371"],"termid":"GO:0090560","terms_by_termid":{"GO:0090560":null}}


id: PBO:0066577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RHEB pseudogene 1","termid":"PBO:0066577"}


id: PBO:0028123
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-lateral_cortical_nodes_absent_from_cell","termid":"PBO:0028123"}


id: PBO:0086101
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for accurate chromosome segregation during meiosis; involved in meiotic telomere clustering (bouquet formation) and telomere-led rapid prophase movements; functions with meiosis-specific telomere-binding protein Ndj1p; CSM4 has a paralog, MPS2, that arose from the whole genome duplication","termid":"PBO:0086101"}


id: GO:0140409
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of mRNA alternative polyadenylation.","definition_xrefs":["PMID:29507755"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of mRNA 3'-end processing","termid":"GO:0031442"},{"relation_name":"is_a","term_name":"regulation of mRNA alternative polyadenylation","termid":"GO:0140408"},{"relation_name":"positively_regulates","term_name":"mRNA alternative polyadenylation","termid":"GO:0110104"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0016071"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0016071"}],"interesting_parent_ids":["GO:0008150","GO:0016071"],"is_obsolete":false,"name":"positive regulation of mRNA alternative polyadenylation","termid":"GO:0140409"}


id: MONDO:1012589
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Oculocutaneous albinism that occurs in Japanese medaka due to a mutation in the TYR gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oculocutaneous albinism, non-human animal","termid":"MONDO:1012579"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oculocutaneous albinism, TYR-related, Japanese medaka","secondary_identifiers":["OMIA:000202-8090"],"synonyms":[{"name":"coat/skin colour, oculocutaneous albinism type I (OCA1), TYR-related in Oryzias latipes (Japanese medaka)","type":"exact"}],"termid":"MONDO:1012589","xrefs":{"Monarch":{"xref_id":"1012589"}}}


id: PBO:0080035
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 17 like family member 21","termid":"PBO:0080035"}


id: PR:O13927
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tht2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13927"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"twin horsetail protein 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23C4.07","synonyms":[{"name":"Spom972h-tht2","type":"exact"},{"name":"meiotically up-regulated gene 22 protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13927"}


id: SO:0000075
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute to describe a gene when the 3' region overlaps with another gene's 3' region.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"overlapping","termid":"SO:0000068"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"three_prime_three_prime_overlap","synonyms":[{"name":"three prime-three prime overlap","type":"exact"}],"termid":"SO:0000075"}


id: MONDO:0020535
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"House allergic alveolitis is a hypersensitivity pneumonitis resulting from the inhalation of an antigen to which an individual has been previously sensitized in his/her domestic environment. House allergic alveolitis encompasses summer hypersensitivity pneumonitis, humidifier-induced lung diseases, hot tub lung and legionellosis.","definition_xrefs":["Orphanet:99907"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypersensitivity pneumonitis","termid":"MONDO:0017853"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"house allergic alveolitis","secondary_identifiers":["SCTID:725415009","icd11.foundation:1985023223","UMLS:C4511048","MEDGEN:1387737","GARD:19703"],"termid":"MONDO:0020535","xrefs":{"Monarch":{"xref_id":"0020535"}}}


id: MONDO:0100415
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any acute myeloid leukemia that has the chromosomal anomaly FLT3 internal tandem duplication. (A genetic abnormality that arises from duplications of the juxtamembrane portion of the gene and results in constitutive activation of the FLT3 receptor tyrosine kinase protein in early hematopoietic progenitor cells. It is associated with acute myelogenous leukemia where it appears to correlate with a poor prognosis.)","definition_xrefs":["NCIT:C67494"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute myeloid leukemia","termid":"MONDO:0018874"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"acute myeloid leukemia, FLT3 internal tandem duplication","secondary_identifiers":["NCIT:C126748"],"synonyms":[{"name":"AML, Activating FLT3-ITD Gene Mutation","type":"exact"},{"name":"AML, Activating FLT3-ITD Mutation","type":"exact"},{"name":"AML, FLT3 ITD","type":"exact"},{"name":"AML, FLT3 internal tandem duplication","type":"exact"},{"name":"AML, FLT3-ITD","type":"exact"},{"name":"AML, FLT3-ITD Activating Mutation","type":"exact"},{"name":"AML, FLT3-ITD Mutation","type":"exact"},{"name":"AML, FLT3/ITD Mutation","type":"exact"}],"termid":"MONDO:0100415","xrefs":{"Monarch":{"xref_id":"0100415"}}}


id: FYPO:0002332
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the Golgi apparatus is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization during vegetative growth","termid":"FYPO:0000644"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000002","FYPO:0000257","FYPO:0001312","FYPO:0001320"],"is_obsolete":false,"name":"normal protein localization to Golgi apparatus","synonyms":[{"name":"normal protein localisation to Golgi apparatus","type":"exact"},{"name":"normal protein localization to Golgi apparatus during mitotic cell cycle","type":"related"},{"name":"normal protein localization to Golgi apparatus during vegetative growth","type":"exact"}],"termid":"FYPO:0002332"}


id: GO:0016696
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which hydrogen acts as an electron donor and reduces NAD or NADP.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on hydrogen as donor","termid":"GO:0016695"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"oxidoreductase activity, acting on hydrogen as donor, NAD or NADP as acceptor","secondary_identifiers":["EC:1.12.1.-"],"termid":"GO:0016696"}


id: PBO:0031562
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_DNA_binding","termid":"PBO:0031562"}


id: PBO:0085411
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Plasma membrane riboflavin transporter; facilitates the uptake of vitamin B2; required for FAD-dependent processes; sequence similarity to mammalian monocarboxylate permeases, however mutants are not deficient in monocarboxylate transport","termid":"PBO:0085411"}


id: PBO:0062792
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"origin recognition complex subunit 6","termid":"PBO:0062792"}


id: PBO:0030013
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_Calcofluor_White","termid":"PBO:0030013"}


id: PBO:0080710
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Wnt family member 10B","termid":"PBO:0080710"}


id: GO:0047564
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-hydroxycyclohexanone + A = AH(2) + cyclohexane-1,3-dione.","definition_xrefs":["EC:1.1.99.26","RHEA:15905"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH-OH group of donors","termid":"GO:0016614"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"3-hydroxycyclohexanone dehydrogenase activity","secondary_identifiers":["KEGG_REACTION:R03212","MetaCyc:3-HYDROXYCYCLOHEXANONE-DEHYDROGENASE-RXN"],"synonyms":[{"name":"3-hydroxycyclohexanone:acceptor 1-oxidoreductase activity","type":"related"}],"termid":"GO:0047564"}


id: MONDO:0100460
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inherited susceptibility or predisposition to developing nicotine dependence.","definition_xrefs":["MONDO:patterns/inherited_susceptibility"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tobacco addiction, susceptibility to","secondary_identifiers":["MEDGEN:348778","OMIM:188890","UMLS:C1861063"],"synonyms":[{"name":"cigarette habituation, susceptibility to","type":"exact"},{"name":"nicotine addiction, protection from","type":"exact"},{"name":"nicotine addiction, susceptibility to","type":"exact"},{"name":"nicotine dependence, protection against","type":"exact"},{"name":"nicotine dependence, susceptibility to","type":"exact"},{"name":"smoking habit, susceptibility to","type":"exact"},{"name":"susceptibility to tobacco addiction","type":"exact"},{"name":"tobacco addiction, susceptibility to","type":"exact"}],"termid":"MONDO:0100460","xrefs":{"Monarch":{"xref_id":"0100460"}}}


id: PBO:0049647
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H4 clustered histone 1","termid":"PBO:0049647"}


id: PBO:0027176
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_spatial_extent_of_telomeric_heterochromatin_assembly","termid":"PBO:0027176"}


id: GO:0019309
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of mannose, the aldohexose manno-hexose, the C-2 epimer of glucose.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mannose metabolic process","termid":"GO:0006013"},{"relation_name":"is_a","term_name":"hexose catabolic process","termid":"GO:0019320"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0005975","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"mannose catabolic process","synonyms":[{"name":"mannose breakdown","type":"exact"},{"name":"mannose catabolism","type":"exact"},{"name":"mannose degradation","type":"exact"}],"termid":"GO:0019309"}


id: PBO:0052672
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 8 pseudogene 40","termid":"PBO:0052672"}


id: PBO:0070700
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L9 pseudogene 4","termid":"PBO:0070700"}


id: GO:0085004
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. An interaction with the host organism mediated by a substance released by the other (symbiont) organism via the haustorium, a projection from a cell or tissue that penetrates the host's cell wall. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete interaction with host via secreted substance released from haustorium (obsolete GO:0085004)","termid":"GO:0085004"}


id: MONDO:0006964
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Overproduction of parathyroid hormone in response to influence external to the parathyroid glands.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hyperparathyroidism","termid":"MONDO:0001741"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secondary hyperparathyroidism","secondary_identifiers":["UMLS:C0020503","HP:0000867","MEDGEN:9368","MESH:D006962","DOID:12466","icd11.foundation:1442752937","NCIT:C113335","MedDRA:10020708","EFO:1001173","SCTID:91478007"],"synonyms":[{"name":"secondary hyperparathyroidism","type":"exact"},{"name":"secondary hyperparathyroidism (disease)","type":"exact"},{"name":"secondary hyperparathyroidism NOS","type":"narrow"}],"termid":"MONDO:0006964","xrefs":{"Monarch":{"xref_id":"0006964"}}}


id: FYPO:0001057
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the import of one or more amino acids into the cell is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal transport","termid":"FYPO:0001720"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0000138"],"is_obsolete":false,"name":"abnormal amino acid import","synonyms":[{"name":"abnormal amino acid import across plasma membrane","type":"exact"},{"name":"abnormal amino acid import into cell","type":"exact"},{"name":"abnormal amino acid uptake","type":"exact"}],"termid":"FYPO:0001057"}


id: PBO:0071793
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPP38 divergent transcript","termid":"PBO:0071793"}


id: PBO:0017604
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anaphase-promoting complex ubiquitin -protein ligase E3 subunit Apc11","termid":"PBO:0017604"}


id: PBO:0039660
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AP2B1 pseudogene 1","termid":"PBO:0039660"}


id: GO:0019089
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The transfer of virions in order to create new infection.","definition_xrefs":["ISBN:0781702534"],"gene_count":0,"genotype_count":0,"name":"obsolete transmission of virus (obsolete GO:0019089)","synonyms":[{"name":"viral transmission","type":"exact"}],"termid":"GO:0019089"}


id: GO:0003131
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that mediates the transfer of information from mesodermal cells to endodermal cells.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell signaling","termid":"GO:0007267"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"mesodermal-endodermal cell signaling","synonyms":[{"name":"mesodermal-endodermal cell signalling","type":"exact"}],"termid":"GO:0003131"}


id: FYECO:0000258
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which arsenate was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ arsenate","termid":"FYECO:0000258"}


id: PATO:0000932
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000932 far red light sensitivity (obsolete PATO:0000932)","termid":"PATO:0000932"}


id: GO:0062131
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: gluconapin + a reduced electron acceptor + O2 = xi-progoitrin + an oxidized electron acceptor + H2O.","definition_xrefs":["PMID:18945935"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dioxygenase activity","termid":"GO:0051213"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"3-butenylglucosinolate 2-hydroxylase activity","secondary_identifiers":["MetaCyc:RXNQT-4343","RHEA:60628"],"synonyms":[{"name":"But-3-enyl Glucosinolate-2-hydroxylase activity","type":"exact"}],"termid":"GO:0062131"}


id: GO:0009968
data:
  {"annotated_genes":["SJAG_02000","SJAG_02392","SJAG_03592","SJAG_00266","SJAG_04910","SJAG_01983","SJAG_02336","SJAG_00526","SJAG_03974","SJAG_03508","SJAG_00883","SJAG_00457","SJAG_03355","SJAG_02426","SJAG_00975","SJAG_00289","SJAG_00610","SJAG_04249","SJAG_02765","SJAG_03893","SJAG_01679","SJAG_06270","SJAG_00229","SJAG_02379","SJAG_01790","SJAG_01464","SJAG_02231","SJAG_00642","SJAG_00824","SJAG_02514","SJAG_03678","SJAG_03353","SJAG_04825","SJAG_00875","SJAG_03501","SJAG_03263","SJAG_01297","SJAG_01253","SJAG_03126","SJAG_04259","SJAG_04206","SJAG_04551","SJAG_02169","SJAG_05346","SJAG_03486","SJAG_03799","SJAG_03185","SJAG_01245","SJAG_04455","SJAG_01184","SJAG_00991","SJAG_02481","SJAG_05000","SJAG_00424","SJAG_04522","SJAG_01114","SJAG_00209","SJAG_04462","SJAG_02858","SJAG_02451","SJAG_02233","SJAG_00293","SJAG_03072","SJAG_03681","SJAG_03089","SJAG_01386","SJAG_04943","SJAG_02013","SJAG_02311","SJAG_00169","SJAG_00990","SJAG_01142"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104255,114651,114164,99951,107600,112344,116281,108630,91085],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902426"},{"annotations":[100805,108343,92451,93115,116763],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0110034"},{"annotations":[101356,116509],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106057"},{"annotations":[96212,99799,107417,107982,104164,118700],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903138"},{"annotations":[102503,89798,103206],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902660"},{"annotations":[88564],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043409"},{"annotations":[94563],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140499"},{"annotations":[99801,95402,96332,92026,117462,118701],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903753"},{"annotations":[107506],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0180040"},{"annotations":[93688],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090029"},{"annotations":[72551],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046580"},{"annotations":[71958],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035024"},{"annotations":[93208,105411,91089,73155,96001,93292,99953,101635,116284,92095,107602,107467,93824,107909,110550],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031030"},{"annotations":[112095,106269,91602],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000639"},{"annotations":[73551],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032007"},{"annotations":[107518,101815,73963,99235,110051,114358,73984,105503,109646,93694,116866,99935,88380,96458,103375,113541,118615,80308,116510,117425,114959,118423],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904262"},{"annotations":[116656],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903940"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of signal transduction.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signal transduction","termid":"GO:0009966"},{"relation_name":"is_a","term_name":"negative regulation of cell communication","termid":"GO:0010648"},{"relation_name":"is_a","term_name":"negative regulation of signaling","termid":"GO:0023057"},{"relation_name":"is_a","term_name":"negative regulation of response to stimulus","termid":"GO:0048585"},{"relation_name":"negatively_regulates","term_name":"signal 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regulation of signal transduction","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0035467","Reactome:R-HSA-8849472"],"synonyms":[{"name":"down regulation of signal transduction","type":"exact"},{"name":"down-regulation of signal transduction","type":"exact"},{"name":"downregulation of signal transduction","type":"exact"},{"name":"inhibition of signal transduction","type":"narrow"},{"name":"negative regulation of signaling pathway","type":"related"},{"name":"negative regulation of signalling pathway","type":"related"}],"termid":"GO:0009968","terms_by_termid":{"GO:0031030":null,"GO:0032007":null,"GO:0035024":null,"GO:0043409":null,"GO:0046580":null,"GO:0090029":null,"GO:0106057":null,"GO:0110034":null,"GO:0140499":null,"GO:0180040":null,"GO:1902426":null,"GO:1902660":null,"GO:1903138":null,"GO:1903753":null,"GO:1903940":null,"GO:1904262":null,"GO:2000639":null}}


id: PBO:0004957
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acid phosphatase Pho1","termid":"PBO:0004957"}


id: MONDO:0037744
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"neoplasm of jaw","termid":"MONDO:0021580"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neoplasm of retromolar area","secondary_identifiers":["MEDGEN:577022","SCTID:126804008","UMLS:C0345590"],"synonyms":[{"name":"neoplasm of retromolar area","type":"exact"},{"name":"tumor of retromolar area","type":"related"},{"name":"tumour of retromolar area","type":"related"}],"termid":"MONDO:0037744","xrefs":{"Monarch":{"xref_id":"0037744"}}}


id: PBO:0072468
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S29 pseudogene 32","termid":"PBO:0072468"}


id: GO:0120146
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to sulfatide, also known as 3-O-sulfogalactosylceramide, SM4, or sulfated galactocerebroside. Sulfatide is a class of sulfoglycolipid, which are glycolipids that contain a sulfate group.","definition_xrefs":["Wikipedia:Sulfatide","GOC:krc","PMID:23574804","PMID:29497057","PMID:21525289","PMID:3549017","PMID:22619219","PMID:22977233"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycolipid binding","termid":"GO:0051861"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0008289"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0008289"],"is_obsolete":false,"name":"sulfatide binding","synonyms":[{"name":"3-O-sulfogalactosylceramide binding","type":"exact"},{"name":"SM4 binding","type":"exact"},{"name":"sulfated galactocerebroside binding","type":"exact"}],"termid":"GO:0120146"}


id: PBO:0057067
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 148b","termid":"PBO:0057067"}


id: MONDO:0000747
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A congenital defect in the muscles of the abdominal wall that results in the intestines and other abdominal organs developing outside the abdominal wall covered in a sac.","definition_xrefs":["NCIT:P378"],"gene_count":0,"genotype_count":0,"name":"obsolete umbilical hernia (obsolete MONDO:0000747)","secondary_identifiers":["ICD9:756.72","ICD9:553.1","NCIT:C118375","NCIT:C98997","SCTID:18735004","MESH:D006554","DOID:0060321","SCTID:396347007","HP:0001537"],"termid":"MONDO:0000747","xrefs":{"Monarch":{"xref_id":"0000747"}}}


id: MONDO:0012140
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete pulmonary function (obsolete MONDO:0012140)","secondary_identifiers":["OMIM:608852"],"synonyms":[{"name":"Plf","type":"related"},{"name":"lung function, accelerated rate of decline In, smoking-related","type":"related"},{"name":"pulmonary function","type":"related"}],"termid":"MONDO:0012140","xrefs":{"Monarch":{"xref_id":"0012140"}}}


id: PR:O94756
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- meu14 gene.","definition_xrefs":["UniProtKB:O94756","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic expression up-regulated protein 14 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1347.03","synonyms":[{"name":"Spom972h-meu14","type":"exact"}],"termid":"PR:O94756"}


id: PBO:0049098
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GPR155 divergent transcript","termid":"PBO:0049098"}


id: MOD:01783
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-serine residue to N,N-dimethyl-L-serine.","definition_xrefs":["PubMed:20668449","RESID:AA0534"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-amino dimethylated residue","termid":"MOD:01686"},{"relation_name":"is_a","term_name":"N-methylated serine","termid":"MOD:01800"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"N,N-dimethyl-L-serine","synonyms":[{"name":"(2S)-2-(dimethylamino)propanoic acid","type":"exact"},{"name":"MOD_RES N,N-dimethylserine","type":"exact"},{"name":"N,N-dimethyl-L-serine","type":"exact"},{"name":"N,N-dimethylserine","type":"exact"}],"termid":"MOD:01783"}


id: PBO:0066311
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RBPJ pseudogene 5","termid":"PBO:0066311"}


id: MONDO:0044725
data:
  {"annotated_genes":["SJAG_00874"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85456],"is_not":false,"summary":null,"term":"MONDO:0044725"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"combined immunodeficiency","termid":"MONDO:0015131"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00874":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"combined immunodeficiency due to GINS1 deficiency","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:617827","GARD:17941","MEDGEN:1799555","DOID:0111993","Orphanet:505227","UMLS:C5568132"],"synonyms":[{"name":"CID due to GINS1 deficiency","type":"exact"},{"name":"IMD55","type":"related"},{"name":"combined immunodeficiency with intrauterine growth retardation-NK cell deficiency-neutropenia","type":"exact"},{"name":"combined immunodeficiency with intrauterine growth retardation-natural killer cell deficiency-neutropenia","type":"exact"},{"name":"immunodeficiency 55","type":"related"}],"termid":"MONDO:0044725","terms_by_termid":{"MONDO:0044725":null},"xrefs":{"Monarch":{"xref_id":"0044725"}}}


id: GO:0001629
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete G-protein receptor 45-like receptor activity (obsolete GO:0001629)","synonyms":[{"name":"G protein receptor 45-like receptor activity","type":"exact"},{"name":"G-protein receptor 45-like receptor activity","type":"exact"},{"name":"GPR45-like receptor","type":"exact"}],"termid":"GO:0001629"}


id: MONDO:0010842
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Mucocutaneous venous malformations (VMCMs) are hereditary vascular malformations characterized by the presence of small, multifocal, bluish-purple venous lesions involving the skin and mucosa.","definition_xrefs":["Orphanet:2451"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"vascular disorder","termid":"MONDO:0005385"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"multiple cutaneous and mucosal venous malformations","secondary_identifiers":["DOID:0050792","MEDGEN:325026","MESH:C563977","SCTID:699301008","GARD:16600","UMLS:C1838437","OMIM:600195"],"synonyms":[{"name":"VENOUS malformations, multiple cutaneous and mucosal","type":"related"},{"name":"VMCM","type":"exact"},{"name":"Vmcm1","type":"related"},{"name":"cutaneous and mucosal venous malformation","type":"exact"},{"name":"mucocutaneous venous malformations","type":"related"}],"termid":"MONDO:0010842","xrefs":{"Monarch":{"xref_id":"0010842"}}}


id: MONDO:0003250
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A granular cell tumor that is confined to the site of origin, without metastatic potential.","definition_xrefs":["NCIT:C3252"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benign glioma","termid":"MONDO:0000638"},{"relation_name":"is_a","term_name":"granular cell tumor","termid":"MONDO:0006235"},{"relation_name":"is_a","term_name":"benign neoplasm of peripheral nervous system","termid":"MONDO:0056804"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benign granular cell tumor","secondary_identifiers":["DOID:5039","MESH:D009379","UMLS:C0027043","MEDGEN:44550"],"synonyms":[{"name":"benign granular cell myoblastoma","type":"exact"},{"name":"benign granular cell neoplasm","type":"exact"},{"name":"benign granular cell tumor","type":"exact"},{"name":"granular cell tumor, benign","type":"exact"},{"name":"myoblastoma","type":"exact"}],"termid":"MONDO:0003250","xrefs":{"Monarch":{"xref_id":"0003250"}}}


id: PBO:0060045
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4 pseudogene 33","termid":"PBO:0060045"}


id: MONDO:0018229
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Stevens-Johnson syndrome is a limited form of toxic epidermal necrolysis characterized by destruction and detachment of the skin epithelium and mucous membranes involving less than 10% of the body surface area.","definition_xrefs":["Orphanet:36426"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"severe cutaneous adverse reaction","termid":"MONDO:0005594"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"toxic epidermal necrolysis","termid":"MONDO:0019810"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"Stevens-Johnson syndrome","secondary_identifiers":["NANDO:1200245","MEDGEN:20955","NANDO:2201006","ICD9:695.13","UMLS:C0038325","GARD:7700","icd11.foundation:450167795","MedDRA:10042033","ICD9:695.12","NCIT:C79484","EFO:0004276","OMIM:608579","ICD9:695.15","MESH:D013262","SCTID:73442001","NANDO:2100290","ICD10CM:L51.1","DOID:0050426"],"synonyms":[{"name":"Dermatostomatitis, Stevens Johnson type","type":"exact"},{"name":"Stevens Johnson syndrome","type":"exact"},{"name":"Stevens-Johnson syndrome, susceptibility to","type":"related"},{"name":"erythema multiforme major","type":"related"},{"name":"hypersensitivity syndrome, carbamazepine-induced, susceptibility to","type":"related"},{"name":"severe cutaneous adverse reaction, susceptibility to","type":"related"},{"name":"toxic Epidermal necrolysis, susceptibility to","type":"related"}],"termid":"MONDO:0018229","xrefs":{"Monarch":{"xref_id":"0018229"}}}


id: GO:0014896
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The muscle system process that results in enlargement or overgrowth of all or part of a muscle organ due to an increase in the size of its muscle cells. Physiological hypertrophy is a normal process during development (it stops in cardiac muscle after adolescence) and can also be brought on in response to demand. In athletes cardiac and skeletal muscles undergo hypertrophy stimulated by increasing muscle activity on exercise. Smooth muscle cells in the uterus undergo hypertrophy during pregnancy.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"muscle system process","termid":"GO:0003012"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"muscle hypertrophy","secondary_identifiers":["Wikipedia:Muscle_hypertrophy"],"termid":"GO:0014896"}


id: PR:Q09865
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 50S ribosomal protein L6 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00126","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"54S ribosomal protein L6, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC12G12.08","secondary_identifiers":["UniProtKB:Q09865"],"synonyms":[{"name":"Spom972h-rplF","type":"exact"}],"termid":"PR:Q09865"}


id: MONDO:0020783
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"angioosteohypertrophic syndrome","termid":"MONDO:0007864"},{"relation_name":"is_a","term_name":"capillary malformation-arteriovenous malformation syndrome","termid":"MONDO:0012016"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"capillary malformation-arteriovenous malformation 1","secondary_identifiers":["SCTID:234143003","Orphanet:90307","UMLS:C4747394","GARD:9787","MEDGEN:1648501","OMIM:608354","OMIM:608355","ICD9:759.6"],"synonyms":[{"name":"CAPILLARY MALFORMATION-ARTERIOVENOUS MALFORMATION 1","type":"exact"},{"name":"CMAVM1","type":"exact"},{"name":"Capillary Malformation-Arteriovenous Malformation","type":"broad"},{"name":"PKWS","type":"exact"},{"name":"Parkes Weber syndrome","type":"exact"},{"name":"capillary malformation-arteriovenous malformation 1","type":"exact"}],"termid":"MONDO:0020783","xrefs":{"Monarch":{"xref_id":"0020783"}}}


id: MONDO:0018812
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete MSH3-related attenuated familial adenomatous polyposis (obsolete MONDO:0018812)","termid":"MONDO:0018812","xrefs":{"Monarch":{"xref_id":"0018812"}}}


id: PBO:0084437
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Malate synthase, enzyme of the glyoxylate cycle; involved in utilization of non-fermentable carbon sources; expression is subject to carbon catabolite repression; localizes in peroxisomes during growth on oleic acid, otherwise cytosolic; can accept butyryl-CoA as acyl-CoA donor in addition to traditional substrate acetyl-CoA","termid":"PBO:0084437"}


id: GO:0004504
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: peptidyl-glycine + ascorbate + O2 = peptidyl(2-hydroxyglycine) + dehydroascorbate + H2O.","definition_xrefs":["EC:1.14.17.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced ascorbate as one donor, and incorporation of one atom of oxygen","termid":"GO:0016715"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"peptidylglycine monooxygenase activity","secondary_identifiers":["MetaCyc:PEPTIDYLGLYCINE-MONOOXYGENASE-RXN","RHEA:21452"],"synonyms":[{"name":"PAM activity","type":"related"},{"name":"PAM-A","type":"related"},{"name":"PAM-B","type":"related"},{"name":"peptide alpha-amidating enzyme","type":"related"},{"name":"peptide alpha-amide synthase activity","type":"related"},{"name":"peptide-alpha-amide synthetase activity","type":"related"},{"name":"peptidyl alpha-amidating enzyme activity","type":"related"},{"name":"peptidylglycine 2-hydroxylase activity","type":"exact"},{"name":"peptidylglycine alpha-amidating monooxygenase activity","type":"related"},{"name":"peptidylglycine alpha-hydroxylase activity","type":"related"},{"name":"peptidylglycine,ascorbate:oxygen oxidoreductase (2-hydroxylating)","type":"related"},{"name":"synthase, peptide alpha-amide","type":"related"}],"termid":"GO:0004504"}


id: MONDO:0005904
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inflammatory process affecting the pericardium.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pericardium disorder","termid":"MONDO:0000474"},{"relation_name":"is_a","term_name":"inflammatory disease","termid":"MONDO:0021166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"pericarditis","secondary_identifiers":["EFO:0007427","MEDGEN:18377","MESH:D010493","SCTID:3238004","DOID:1787","Orphanet:58208","UMLS:C0031046","HP:0001701","NCIT:C34915","icd11.foundation:1296696944"],"synonyms":[{"name":"inflammation of pericardium","type":"exact"},{"name":"pericarditis","type":"exact"},{"name":"pericarditis (disease)","type":"exact"},{"name":"pericardium inflammation","type":"exact"}],"termid":"MONDO:0005904","xrefs":{"Monarch":{"xref_id":"0005904"}}}


id: PBO:0056979
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR29B2 and MIR29C host gene","termid":"PBO:0056979"}


id: MONDO:0016311
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"skin vascular disease","termid":"MONDO:0019293"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"Bockenheimer syndrome","secondary_identifiers":["Orphanet:217008","icd11.foundation:1659229633","MEDGEN:1843091","UMLS:C5679814","GARD:13063"],"synonyms":[{"name":"genuine diffuse phlebectasia","type":"exact"}],"termid":"MONDO:0016311","xrefs":{"Monarch":{"xref_id":"0016311"}}}


id: FYPO:0004373
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle checkpoint phenotype in which the mitotic G2 DNA damage checkpoint is abnormal. The mitotic G2 DNA damage checkpoint negatively regulates progression through the G2/M transition of the mitotic cell cycle in response to DNA damage. In a mutant, the checkpoint may fail to arrest or delay cell cycle progression under appropriate conditions, or the incidence or duration of arrest or delay may differ from wild type under any specified set of conditions.","definition_xrefs":["PomBase:mah","GO:0007095"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic DNA damage checkpoint","termid":"FYPO:0000006"},{"relation_name":"is_a","term_name":"abnormal regulation of G2/M transition of mitotic cell cycle","termid":"FYPO:0000166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000298","FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0000631"],"is_obsolete":false,"name":"abnormal mitotic G2 DNA damage checkpoint","synonyms":[{"name":"abnormal G2 DNA damage checkpoint during mitotic cell cycle","type":"exact"},{"name":"abnormal mitotic G2 DNA damage checkpoint activation","type":"related"},{"name":"abnormal mitotic G2 DNA damage checkpoint during vegetative growth","type":"exact"},{"name":"abnormal mitotic cell cycle G2/M transition DNA damage checkpoint","type":"exact"}],"termid":"FYPO:0004373"}


id: MONDO:0016909
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"partial deletion of chromosome 10","termid":"MONDO:0016875"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"partial monosomy of the long arm of chromosome 10","secondary_identifiers":["icd11.foundation:376045936","Orphanet:262083","GARD:20830","MEDGEN:162778","UMLS:C0795839"],"synonyms":[{"name":"partial deletion of chromosome 10q","type":"exact"},{"name":"partial deletion of the long arm of chromosome 10","type":"exact"},{"name":"partial monosomy of chromosome 10q","type":"exact"},{"name":"partial monosomy of the long arm of chromosome type 10","type":"exact"}],"termid":"MONDO:0016909","xrefs":{"Monarch":{"xref_id":"0016909"}}}


id: PBO:0034135
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_start_location","termid":"PBO:0034135"}


id: PBO:0065064
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteoglycan 2, pro eosinophil major basic protein","termid":"PBO:0065064"}


id: FYPO:0003167
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of protein farnesyltransferase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000652","FYPO:0000661","FYPO:0001985","FYPO:0000707"],"is_obsolete":false,"name":"abnormal protein farnesyltransferase activity","termid":"FYPO:0003167"}


id: SO:0005856
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A primary transcript encoding seryl tRNA (SO:000269).","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA_primary_transcript","termid":"SO:0000210"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"selenocysteine_tRNA_primary_transcript","synonyms":[{"name":"selenocysteine tRNA primary transcript","type":"exact"}],"termid":"SO:0005856"}


id: PBO:0067237
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 308, pseudogene","termid":"PBO:0067237"}


id: PBO:0089762
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-1,6- mannanase","termid":"PBO:0089762"}


id: PBO:0040400
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase H+ transporting V1 subunit G1 pseudogene 1","termid":"PBO:0040400"}


id: PBO:0053899
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1187","termid":"PBO:0053899"}


id: FYPO:0007568
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the mitotic spindle pole body is normal (i.e. indistinguishable from wild type) during anaphase.","definition_xrefs":["PMID:11384993","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to mitotic spindle pole body during mitosis","termid":"FYPO:0005709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000257","FYPO:0001312","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"normal protein localization to mitotic spindle pole body during anaphase","synonyms":[{"name":"normal protein localisation to mitotic spindle pole body during anaphase","type":"exact"},{"name":"normal protein localization to mitotic spindle pole body during anaphase during vegetative growth","type":"exact"},{"name":"normal protein localization to mitotic spindle pole body during anaphase of mitotic cell cycle","type":"exact"},{"name":"normal protein localization to spindle pole body during mitotic anaphase","type":"exact"}],"termid":"FYPO:0007568"}


id: PBO:0081241
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF8-ERVK3-1 readthrough (NMD candidate)","termid":"PBO:0081241"}


id: GO:0043877
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-galactosamine 6-phosphate + H2O = D-tagatose 6-phosphate + NH3.","definition_xrefs":["PMID:10931310"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity, interconverting aldoses and ketoses","termid":"GO:0016861"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016853","GO:0003674"],"is_obsolete":false,"name":"galactosamine-6-phosphate isomerase activity","synonyms":[{"name":"AgaI","type":"related"},{"name":"galactosamine-6-phosphate deaminase activity","type":"exact"}],"termid":"GO:0043877"}


id: PBO:0030774
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_hydrogen_peroxide","termid":"PBO:0030774"}


id: FYPO:0000249
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population phenotype in which cell growth is decreased relative to normal in a medium containing ammonia as the nitrogen source.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased vegetative cell population growth","termid":"FYPO:0001355"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0000139","FYPO:0005447","FYPO:0002058","FYPO:0001985","FYPO:0000003","FYPO:0002060"],"is_obsolete":false,"name":"decreased cell population growth on ammonia nitrogen source","secondary_identifiers":["FYPO:0000248"],"synonyms":[{"name":"decreased growth on ammonia nitrogen source","type":"broad"},{"name":"decreased vegetative cell growth on ammonia nitrogen source","type":"exact"},{"name":"growth defect, slow growth in minimal media","type":"related"},{"name":"growth defect, slow growth with ammonia nitrogen source","type":"narrow"},{"name":"reduced cell growth on ammonia nitrogen source","type":"exact"},{"name":"slow cell growth in minimal medium","type":"related"},{"name":"slow cell growth on ammonia nitrogen source","type":"narrow"}],"termid":"FYPO:0000249"}


id: PBO:0005218
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding protein (predicted)","termid":"PBO:0005218"}


id: GO:0005038
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete death receptor interacting protein activity (obsolete GO:0005038)","synonyms":[{"name":"death receptor interacting protein activity","type":"exact"}],"termid":"GO:0005038"}


id: GO:0052017
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways performed by an organism resulting in the breakdown of xylan within the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["ISBN:0198547684"],"gene_count":0,"genotype_count":0,"name":"obsolete catabolism by symbiont of host xylan (obsolete GO:0052017)","synonyms":[{"name":"catabolism by organism of host xylan","type":"exact"}],"termid":"GO:0052017"}


id: PBO:0064660
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A like 4C","termid":"PBO:0064660"}


id: MONDO:0022655
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"inborn errors of metabolism","termid":"MONDO:0019052"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"cardiomyopathy hypogonadism metabolic anomalies","secondary_identifiers":["GARD:1109"],"termid":"MONDO:0022655","xrefs":{"Monarch":{"xref_id":"0022655"}}}


id: PBO:0089826
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"seven transmembrane receptor-like protein","termid":"PBO:0089826"}


id: PATO:0000508
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000508 relative sensitivity value (obsolete PATO:0000508)","termid":"PATO:0000508"}


id: PBO:0043278
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-type lectin domain family 4 member A","termid":"PBO:0043278"}


id: GO:0010133
data:
  {"annotated_genes":["SJAG_02235","SJAG_01903"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[70667,78390],"is_not":false,"summary":null,"term":"GO:0010133"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of proline into other compounds, including glutamate.","definition_xrefs":["GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glutamate metabolic process","termid":"GO:0006536"},{"relation_name":"is_a","term_name":"proline catabolic process","termid":"GO:0006562"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01903":null,"SJAG_02235":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006520"],"is_obsolete":false,"name":"proline catabolic process to glutamate","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["GO:0019494","MetaCyc:PROUT-PWY"],"synonyms":[{"name":"proline breakdown to glutamate","type":"exact"},{"name":"proline degradation to glutamate","type":"exact"},{"name":"proline oxidation","type":"related"}],"termid":"GO:0010133","terms_by_termid":{"GO:0010133":null}}


id: FYPO:0004588
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which mitosis takes place abnormally after the cell has undergone a normal mitotic nuclear division and passed through the subsequent mitotic interphase.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitosis","termid":"FYPO:0000337"},{"relation_name":"is_a","term_name":"abnormal vegetative cell phenotype following normal mitosis","termid":"FYPO:0004593"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0001985","FYPO:0000337","FYPO:0005447","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"abnormal mitosis following normal mitosis","synonyms":[{"name":"abnormal mitosis following normal mitosis and interphase","type":"exact"},{"name":"abnormal mitosis following normal mitosis and passage through mitotic G1 phase","type":"exact"},{"name":"abnormal mitosis following normal mitosis during vegetative growth","type":"exact"},{"name":"abnormal mitotic nuclear division following normal mitotic nuclear division","type":"exact"},{"name":"abnormal nuclear division following normal nuclear division during mitotic cell cycle","type":"exact"}],"termid":"FYPO:0004588"}


id: GO:0032027
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a light chain of a myosin complex.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myosin binding","termid":"GO:0017022"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0008092"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0008092","GO:0003674"],"is_obsolete":false,"name":"myosin light chain binding","termid":"GO:0032027"}


id: PBO:0084030
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi membrane protein involved in manganese homeostasis; overproduction suppresses the sod1 (copper, zinc superoxide dismutase) null mutation","termid":"PBO:0084030"}


id: PR:O59676
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pdp1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O59676"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PWWP domain-containing protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC29A3.13","synonyms":[{"name":"Spom972h-pdp1","type":"exact"},{"name":"set9-associated factor pdp1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O59676"}


id: PBO:0043258
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"claudin 16","termid":"PBO:0043258"}


id: FYPO:0001017
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the switch from the monopolar to bipolar mode of cell growth (new end take-off; NETO) begins earlier than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal NETO","termid":"FYPO:0000147"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0005568"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0005568"],"is_obsolete":false,"name":"premature NETO","synonyms":[{"name":"advanced NETO","type":"exact"},{"name":"early NETO","type":"exact"},{"name":"premature NETO during mitotic cell cycle","type":"related"},{"name":"premature NETO during vegetative growth","type":"exact"},{"name":"premature activation of bipolar cell growth","type":"related"},{"name":"premature cell growth mode switching, monopolar to bipolar","type":"exact"},{"name":"premature new end take-off","type":"exact"},{"name":"premature switch from monopolar to bipolar cell growth","type":"exact"}],"termid":"FYPO:0001017"}


id: MONDO:0008413
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete schizophrenia (obsolete MONDO:0008413)","termid":"MONDO:0008413","xrefs":{"Monarch":{"xref_id":"0008413"}}}


id: MONDO:1012567
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"osseous choristoma of the ciliary body, non-human animal","termid":"MONDO:1012004"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"osseous choristoma of the ciliary body, domestic guinea pig","secondary_identifiers":["OMIA:002576-10141"],"termid":"MONDO:1012567","xrefs":{"Monarch":{"xref_id":"1012567"}}}


id: PBO:0030827
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_phosphoribosylformylglycinamidine_cyclo-ligase_activity","termid":"PBO:0030827"}


id: PBO:0012848
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.8.4.12","termid":"PBO:0012848"}


id: PBO:0085703
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in rRNA and ribosome biogenesis; activated in stochastic pulses of nuclear localization; binds polymerase A and C motif; subunit of the RPD3L histone deacetylase complex; has chromatin specific SANT domain; involved in telomeric gene silencing and filamentation; relative distribution to the nucleus increases upon DNA replication stress","termid":"PBO:0085703"}


id: MONDO:1011614
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Von Willebrand disease that occurs in horse.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Von Willebrand disease, non-human animal","termid":"MONDO:1011411"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Von Willebrand disease, horse","secondary_identifiers":["OMIA:001056-9796"],"termid":"MONDO:1011614","xrefs":{"Monarch":{"xref_id":"1011614"}}}


id: MONDO:0020571
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"epidemic louse-borne typhus","termid":"MONDO:0019362"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"relapsing epidemic typhus","secondary_identifiers":["UMLS:C5681812","Orphanet:99991","GARD:19726","MEDGEN:1826151"],"termid":"MONDO:0020571","xrefs":{"Monarch":{"xref_id":"0020571"}}}


id: PATO:0002152
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A curvature quality inhering in a bearer by virtue of the bearer's being curved outwards from the side.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"splayed","termid":"PATO:0001785"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splayed lateral","termid":"PATO:0002152"}


id: MONDO:1011433
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hyperkalemic periodic paralysis that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary neurological disease, non-human animal","termid":"MONDO:1012972"},{"relation_name":"is_a","term_name":"inborn errors of metabolism, non-human animal","termid":"MONDO:1012979"},{"relation_name":"is_a","term_name":"neuromuscular disease, non-human animal","termid":"MONDO:1012983"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyperkalemic periodic paralysis, non-human animal","secondary_identifiers":["OMIA:000785"],"synonyms":[{"name":"HYPP","type":"exact"}],"termid":"MONDO:1011433","xrefs":{"Monarch":{"xref_id":"1011433"}}}


id: GO:0072169
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the tubules of the posterior mesonephros acquire their identity.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anterior/posterior pattern specification involved in kidney development","termid":"GO:0072098"},{"relation_name":"is_a","term_name":"specification of mesonephric tubule identity","termid":"GO:0072167"},{"relation_name":"part_of","term_name":"posterior mesonephric tubule development","termid":"GO:0072166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"specification of posterior mesonephric tubule identity","termid":"GO:0072169"}


id: PBO:0067078
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 110, pseudogene","termid":"PBO:0067078"}


id: PBO:0011958
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase allele types","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"partial_amino_acid_deletion","termid":"PBO:0011958"}


id: PBO:0030916
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_level_of_substance_in_cell_during_vegetative_growth","termid":"PBO:0030916"}


id: MONDO:0001601
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An malaria caused by infection with Plasmodium ovale.","definition_xrefs":["MONDO:patterns/specific_infectious_disease_by_agent"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malaria","termid":"MONDO:0005136"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"Plasmodium ovale malaria","secondary_identifiers":["ICD10CM:B53.0","UMLS:C0152072","SCTID:19341001","DOID:12919","MEDGEN:508870","ICD9:084.3"],"synonyms":[{"name":"Malariaby Plasmodium ovale","type":"exact"},{"name":"ovale malaria","type":"exact"}],"termid":"MONDO:0001601","xrefs":{"Monarch":{"xref_id":"0001601"}}}


id: MONDO:0008747
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Type 3 oculocutaneous albinism (OCA3) is a form of oculocutaneous albinism (OCA) characterized by rufous or brown albinism and occurring mainly in the African population.","definition_xrefs":["Orphanet:79433"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oculocutaneous albinism","termid":"MONDO:0018910"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005093"],"is_obsolete":false,"name":"oculocutaneous albinism type 3","secondary_identifiers":["MEDGEN:87450","icd11.foundation:1565320806","OMIM:278400","DOID:0070097","ICD9:270.2","MESH:C537731","UMLS:C0342683","GARD:4039","SCTID:63450009","OMIM:203290"],"synonyms":[{"name":"OCA3","type":"exact"},{"name":"ROCA","type":"related"},{"name":"Red oculocutaneous albinism","type":"exact"},{"name":"TYRP1 oculocutaneous albinism","type":"exact"},{"name":"Xanthism","type":"related"},{"name":"albinism 3","type":"related"},{"name":"albinism, oculocutaneous, type 3","type":"related"},{"name":"albinism, oculocutaneous, type III","type":"related"},{"name":"oculocutaneous albinism caused by mutation in TYRP1","type":"exact"},{"name":"oculocutaneous albinism type 3","type":"exact"},{"name":"oculocutaneous albinism type III","type":"related"},{"name":"oculocutaneous albinism, type 3","type":"related"},{"name":"rufous OCA","type":"related"},{"name":"rufous oculocutaneous albinism","type":"exact"},{"name":"xanthous oculocutaneous albinism","type":"exact"}],"termid":"MONDO:0008747","xrefs":{"Monarch":{"xref_id":"0008747"}}}


id: PBO:0047447
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Fc gamma receptor IIc (gene/pseudogene)","termid":"PBO:0047447"}


id: MONDO:0017826
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"non-functioning pituitary adenoma","termid":"MONDO:0019613"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"null pituitary adenoma","secondary_identifiers":["ICD10CM:D35.2","MEDGEN:1813085","GARD:21393","NCIT:C45924","Orphanet:314790","UMLS:C5680967"],"termid":"MONDO:0017826","xrefs":{"Monarch":{"xref_id":"0017826"}}}


id: GO:2000135
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of regulation of secondary heart field cardioblast proliferation.","definition_xrefs":["GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of regulation of secondary heart field cardioblast proliferation (obsolete GO:2000135)","synonyms":[{"name":"positive regulation of regulation of second heart field cardioblast proliferation","type":"exact"},{"name":"positive regulation of regulation of secondary heart field cardioblast proliferation","type":"exact"}],"termid":"GO:2000135"}


id: MOD:00934
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Post-translational","definition_xrefs":["Unimod:506"],"direct_ancestors":[{"relation_name":"is_a","term_name":"levuglandinyl (prostaglandin H2) adduct","termid":"MOD:00846"},{"relation_name":"is_a","term_name":"modified L-arginine residue","termid":"MOD:00902"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Levuglandinyl - arginine hydroxylactam adduct","synonyms":[{"name":"LG-Hlactam-R","type":"related"},{"name":"Levuglandinyl - arginine hydroxylactam adduct","type":"related"}],"termid":"MOD:00934"}


id: GO:0019310
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of inositol, 1,2,3,4,5,6-cyclohexanehexol, a growth factor for animals and microorganisms.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inositol metabolic process","termid":"GO:0006020"},{"relation_name":"is_a","term_name":"polyol catabolic process","termid":"GO:0046174"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"inositol catabolic process","secondary_identifiers":["MetaCyc:P562-PWY"],"synonyms":[{"name":"inositol breakdown","type":"exact"},{"name":"inositol catabolism","type":"exact"},{"name":"inositol degradation","type":"exact"},{"name":"myo-inositol catabolic process","type":"narrow"},{"name":"myo-inositol catabolism","type":"narrow"},{"name":"vitamin Bh catabolic process","type":"exact"},{"name":"vitamin Bh catabolism","type":"exact"}],"termid":"GO:0019310"}


id: MONDO:1011132
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Atrophic rhinitis that occurs in cattle.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"atrophic rhinitis, non-human animal","termid":"MONDO:1010285"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"atrophic rhinitis, cattle","secondary_identifiers":["OMIA:000091-9913"],"termid":"MONDO:1011132","xrefs":{"Monarch":{"xref_id":"1011132"}}}


id: GO:0061295
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the occurrence or rate of mesenchymal stem cell death by apoptotic process that contributes to the shaping of the nephron in the mesonephros.","definition_xrefs":["GOC:mtg_kidney_jan10","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mesenchymal cell apoptotic process involved in nephron morphogenesis","termid":"GO:0072039"},{"relation_name":"regulates","term_name":"mesenchymal stem cell maintenance involved in mesonephric nephron morphogenesis","termid":"GO:0061235"},{"relation_name":"regulates","term_name":"mesenchymal cell apoptotic process involved in mesonephric nephron morphogenesis","termid":"GO:1901146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of mesenchymal cell apoptotic process involved in mesonephric nephron morphogenesis","synonyms":[{"name":"regulation of mesenchymal stem cell apoptosis involved in mesonephric nephron morphogenesis","type":"narrow"},{"name":"regulation of mesenchymal stem cell apoptotic process involved in mesonephric nephron morphogenesis","type":"exact"}],"termid":"GO:0061295"}


id: MONDO:0008065
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nasal groove, familial transverse","secondary_identifiers":["UMLS:C1834370","MEDGEN:322400","OMIM:161500"],"synonyms":[{"name":"nasal groove, familial transverse","type":"exact"}],"termid":"MONDO:0008065","xrefs":{"Monarch":{"xref_id":"0008065"}}}


id: GO:0060994
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter that contributes to the branching morphogenesis by which the kidney progresses from its initial formation to the mature state.","definition_xrefs":["GOC:mtg_kidney_jan10","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transcription from RNA polymerase II promoter involved in kidney development (obsolete GO:0060994)","termid":"GO:0060994"}


id: GO:0005301
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete valine/tyrosine/tryptophan permease activity (obsolete GO:0005301)","synonyms":[{"name":"hydrogen/valine-tyrosine-tryptophan transporter","type":"exact"},{"name":"valine/tyrosine/tryptophan permease activity","type":"exact"}],"termid":"GO:0005301"}


id: PR:Q9USP0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC11E10.07c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9USP0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation initiation factor eIF-2B subunit alpha (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC11E10.07c","synonyms":[{"name":"Spom972h-SPCC11E10.07c","type":"exact"},{"name":"eIF-2B GDP-GTP exchange factor subunit alpha (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9USP0"}


id: MONDO:0007234
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"branchial myoclonus with spastic paraparesis and cerebellar ataxia","secondary_identifiers":["OMIM:113610","MEDGEN:349424","MESH:C566188","UMLS:C1862071"],"synonyms":[{"name":"branchial myoclonus with spastic paraparesis and cerebellar ataxia","type":"exact"}],"termid":"MONDO:0007234","xrefs":{"Monarch":{"xref_id":"0007234"}}}


id: PBO:0046071
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 3 subunit L pseudogene 2","termid":"PBO:0046071"}


id: PBO:0077943
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ala (anticodon AGC) 3-1","termid":"PBO:0077943"}


id: PBO:0080918
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"YWHAQ pseudogene 7","termid":"PBO:0080918"}


id: GO:0005155
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. This term was not defined before being made obsolete.","definition_xrefs":["GOC:mah","GOC:dph","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete epidermal growth factor receptor activating ligand activity (obsolete GO:0005155)","synonyms":[{"name":"EGF receptor activating ligand activity","type":"exact"},{"name":"EGFR activating ligand activity","type":"exact"},{"name":"epidermal growth factor receptor activating ligand activity","type":"exact"}],"termid":"GO:0005155"}


id: GO:0033705
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: GDP-6-deoxy-D-mannose + NAD(P)+ = GDP-4-dehydro-6-deoxy-D-mannose + NAD(P)H + H+.","definition_xrefs":["EC:1.1.1.281"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"GDP-4-dehydro-6-deoxy-D-mannose reductase activity","synonyms":[{"name":"GDP-4-keto-6-deoxy-D-mannose reductase activity","type":"broad"},{"name":"GDP-6-deoxy-D-lyxo-4-hexulose reductase activity","type":"related"},{"name":"GDP-6-deoxy-D-mannose:NAD(P)+ 4-oxidoreductase (D-rhamnose-forming) activity","type":"related"},{"name":"Rmd","type":"related"}],"termid":"GO:0033705"}


id: GO:0048730
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the epidermis are generated and organized. The epidermis is the outer epithelial layer of an animal, it may be a single layer that produces an extracellular material (e.g. the cuticle of arthropods) or a complex stratified squamous epithelium, as in the case of many vertebrate species.","definition_xrefs":["UBERON:0001003","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"morphogenesis of an epithelium","termid":"GO:0002009"},{"relation_name":"part_of","term_name":"epidermis development","termid":"GO:0008544"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epidermis morphogenesis","synonyms":[{"name":"hypodermis morphogenesis","type":"related"}],"termid":"GO:0048730"}


id: PBO:0073185
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SELENOO antisense RNA 1","termid":"PBO:0073185"}


id: PBO:0028207
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_punctate_nuclear_protein_localization_during_cellular_response_to_ionizing_radiation","termid":"PBO:0028207"}


id: MONDO:0003978
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An aggressive, high-grade, and poorly differentiated carcinoma with neuroendocrine differentiation that arises from the colon. It is characterized by the presence of malignant small cells.","definition_xrefs":["NCIT:C6761"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small cell carcinoma","termid":"MONDO:0000402"},{"relation_name":"is_a","term_name":"colon carcinoma","termid":"MONDO:0002032"},{"relation_name":"is_a","term_name":"colon neuroendocrine neoplasm","termid":"MONDO:0002882"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"colon small cell neuroendocrine carcinoma","secondary_identifiers":["MEDGEN:232087","DOID:6727","UMLS:C1333099"],"synonyms":[{"name":"Oat cell carcinoma of colon","type":"exact"},{"name":"Oat cell carcinoma of the colon","type":"exact"},{"name":"Oat cell colon carcinoma","type":"exact"},{"name":"colon Oat cell carcinoma","type":"exact"},{"name":"colon small cell carcinoma","type":"exact"},{"name":"colon small cell neuroendocrine cancer","type":"exact"},{"name":"colon small cell neuroendocrine carcinoma","type":"exact"},{"name":"colonic Oat cell carcinoma","type":"exact"},{"name":"colonic small cell carcinoma","type":"exact"},{"name":"small cell carcinoma of colon","type":"exact"},{"name":"small cell carcinoma of the colon","type":"exact"},{"name":"small cell colon carcinoma","type":"exact"}],"termid":"MONDO:0003978","xrefs":{"Monarch":{"xref_id":"0003978"}}}


id: GO:0006920
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete commitment to apoptosis (obsolete GO:0006920)","synonyms":[{"name":"commitment to apoptosis","type":"exact"}],"termid":"GO:0006920"}


id: PBO:0061427
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear receptor subfamily 1 group D member 1","termid":"PBO:0061427"}


id: GO:2000068
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of defense response to insect.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to biotic stimulus","termid":"GO:0002831"},{"relation_name":"is_a","term_name":"regulation of defense response","termid":"GO:0031347"},{"relation_name":"is_a","term_name":"regulation of response to external stimulus","termid":"GO:0032101"},{"relation_name":"regulates","term_name":"defense response to insect","termid":"GO:0002213"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of defense response to insect","synonyms":[{"name":"regulation of physiological defense response to insect","type":"exact"}],"termid":"GO:2000068"}


id: GO:0050086
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-mannitol + NAD+ = D-fructose + NADH.","definition_xrefs":["EC:1.1.1.67","MetaCyc:MANNITOL-2-DEHYDROGENASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"mannitol 2-dehydrogenase activity","secondary_identifiers":["RHEA:12084"],"synonyms":[{"name":"D-mannitol dehydrogenase activity","type":"related"},{"name":"D-mannitol:NAD+ 2-oxidoreductase activity","type":"related"}],"termid":"GO:0050086"}


id: PBO:0079875
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF3A pseudogene 2","termid":"PBO:0079875"}


id: GO:2000881
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of starch catabolic process.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of carbohydrate catabolic process","termid":"GO:0043470"},{"relation_name":"is_a","term_name":"regulation of starch metabolic process","termid":"GO:2000904"},{"relation_name":"regulates","term_name":"starch catabolic process","termid":"GO:0005983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"regulation of starch catabolic process","synonyms":[{"name":"regulation of starch breakdown","type":"exact"},{"name":"regulation of starch catabolism","type":"exact"},{"name":"regulation of starch degradation","type":"exact"}],"termid":"GO:2000881"}


id: PBO:0026963
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-viable_elongated_vegetative_cell_during_phosphate_starvation","termid":"PBO:0026963"}


id: PBO:0077671
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TNF receptor superfamily member 17","termid":"PBO:0077671"}


id: GO:0061866
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of the addition of one or more phosphate groups to histone H3 on a serine residue at position 10.","definition_xrefs":["PMID:27521428"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of histone H3-S10 phosphorylation (obsolete GO:0061866)","termid":"GO:0061866"}


id: PBO:0003580
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-5 sterol desaturase Erg32","termid":"PBO:0003580"}


id: GO:0010677
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that decreases the rate, extent or frequency of the chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y, as carried out by individual cells.","definition_xrefs":["GOC:tb","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of cellular carbohydrate metabolic process (obsolete GO:0010677)","termid":"GO:0010677"}


id: GO:0072092
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the ureteric bud grows along its axis and contributes to the formation of the metanephros.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental growth involved in morphogenesis","termid":"GO:0060560"},{"relation_name":"part_of","term_name":"ureteric bud elongation","termid":"GO:0060677"},{"relation_name":"part_of","term_name":"metanephric renal vesicle formation","termid":"GO:0072093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ureteric bud invasion","termid":"GO:0072092"}


id: GO:0005643
data:
  {"annotated_genes":["SJAG_00962","SJAG_04379","SJAG_01833","SJAG_02757","SJAG_00641","SJAG_00093","SJAG_03593","SJAG_03847","SJAG_02274","SJAG_03299","SJAG_05243","SJAG_02210","SJAG_01293","SJAG_02424","SJAG_03182","SJAG_02425","SJAG_03200","SJAG_00375","SJAG_01065","SJAG_04284","SJAG_03281","SJAG_02661","SJAG_01460","SJAG_04721","SJAG_01185","SJAG_04645","SJAG_03986","SJAG_04148","SJAG_01584","SJAG_03103","SJAG_04017","SJAG_00178","SJAG_03729","SJAG_01374","SJAG_03795","SJAG_03300","SJAG_00471","SJAG_01013","SJAG_03907","SJAG_01834","SJAG_03449","SJAG_02520","SJAG_04656"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[68649,70461,74872,76083,77090,79047,79946,87729,96483,103965,106113,108134,112129,118401,119615,119637,119638,119639,119643,119662,119663,120016],"is_not":false,"summary":null,"term":"GO:0005643"},{"annotations":[71249,77352,101755,76482,80399,94348],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0044613"},{"annotations":[75844,94349,75099,103358],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0044614"},{"annotations":[70964,76772,75536],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0044611"},{"annotations":[103359],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0044612"},{"annotations":[76483,61027,115272,89357,95345,115930],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0044615"},{"annotations":[80787,73426,74022,70795,73220,72164,89367,74421,110237],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031080"},{"annotations":[74443,119969],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070762"}]},"cv_name":"cellular_component","definition":"A protein complex providing a discrete opening in the nuclear envelope of a eukaryotic cell, where the inner and outer nuclear membranes are joined.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"},{"relation_name":"part_of","term_name":"nuclear envelope","termid":"GO:0005635"}],"gene_count":43,"genes_by_uniquename":{"SJAG_00093":null,"SJAG_00178":null,"SJAG_00375":null,"SJAG_00471":null,"SJAG_00641":null,"SJAG_00962":null,"SJAG_01013":null,"SJAG_01065":null,"SJAG_01185":null,"SJAG_01293":null,"SJAG_01374":null,"SJAG_01460":null,"SJAG_01584":null,"SJAG_01833":null,"SJAG_01834":null,"SJAG_02210":null,"SJAG_02274":null,"SJAG_02424":null,"SJAG_02425":null,"SJAG_02520":null,"SJAG_02661":null,"SJAG_02757":null,"SJAG_03103":null,"SJAG_03182":null,"SJAG_03200":null,"SJAG_03281":null,"SJAG_03299":null,"SJAG_03300":null,"SJAG_03449":null,"SJAG_03593":null,"SJAG_03729":null,"SJAG_03795":null,"SJAG_03847":null,"SJAG_03907":null,"SJAG_03986":null,"SJAG_04017":null,"SJAG_04148":null,"SJAG_04284":null,"SJAG_04379":null,"SJAG_04645":null,"SJAG_04656":null,"SJAG_04721":null,"SJAG_05243":null},"genotype_count":0,"in_subsets":["cc_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005634","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"nuclear pore","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:21733045":null,"PMID:21802294":null,"PMID:24184107":null,"PMID:32109380":null,"PMID:33495454":null},"secondary_identifiers":["GO:0005644","NIF_Subcellular:sao220861693","Wikipedia:Nuclear_pore"],"synonyms":[{"name":"NPC","type":"exact"},{"name":"nuclear pore complex","type":"exact"},{"name":"nuclear pore membrane protein","type":"narrow"},{"name":"nucleopore","type":"exact"}],"termid":"GO:0005643","terms_by_termid":{"GO:0005643":null,"GO:0031080":null,"GO:0044611":null,"GO:0044612":null,"GO:0044613":null,"GO:0044614":null,"GO:0044615":null,"GO:0070762":null}}


id: PBO:0045493
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dermatan sulfate epimerase","termid":"PBO:0045493"}


id: MONDO:0016629
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete hemorrhagic disorder due to a platelet anomaly (obsolete MONDO:0016629)","secondary_identifiers":["Orphanet:248326"],"synonyms":[{"name":"rare bleeding disorder due to a platelet anomaly","type":"exact"},{"name":"rare bleeding disorder due to a thrombopathy and/or thrombocytopenia","type":"exact"},{"name":"rare coagulopathy due to a platelet anomaly","type":"exact"},{"name":"rare coagulopathy due to a thrombopathy and/or thrombocytopenia","type":"exact"},{"name":"rare hemorrhagic disorder due to a thrombopathy and/or thrombocytopenia","type":"exact"}],"termid":"MONDO:0016629","xrefs":{"Monarch":{"xref_id":"0016629"}}}


id: PBO:0071572
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L35 pseudogene 1","termid":"PBO:0071572"}


id: MONDO:0009964
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An asphyxiating thoracic dystrophy that has material basis in homozygous or compound heterozygous mutation in the IFT140 gene on chromosome 16p13.","definition_xrefs":["PMID:22503633","DOID:0110097"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"familial cystic renal disease","termid":"MONDO:0019741"},{"relation_name":"excluded_subClassOf","term_name":"obsolete syndromic retinitis pigmentosa (obsolete MONDO:0020240)","termid":"MONDO:0020240"},{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"Jeune syndrome","termid":"MONDO:0018770"},{"relation_name":"is_a","term_name":"acromelic dysplasia","termid":"MONDO:0019695"},{"relation_name":"is_a","term_name":"IFT140-related recessive ciliopathy","termid":"MONDO:0100509"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005240"],"is_obsolete":false,"name":"short-rib thoracic dysplasia 9 with or without polydactyly","secondary_identifiers":["Orphanet:140969","OMIM:266920","MEDGEN:341455","GARD:15227","ICD9:759.89","SCTID:254092004","UMLS:C1849437"],"synonyms":[{"name":"Conorenal syndrome","type":"exact"},{"name":"Mainzer Saldino syndrome","type":"exact"},{"name":"Mainzer-Saldino syndrome","type":"exact"},{"name":"SRTD9","type":"exact"},{"name":"Saldino-Mainzer syndrome","type":"exact"},{"name":"renal dysplasia, retinal pigmentary dystrophy, cerebellar ataxia and skeletal dysplasia","type":"exact"},{"name":"renal dysplasia, retinal pigmentary dystrophy, cerebellar ataxia, and skeletal dysplasia","type":"related"},{"name":"renal dysplasia-retinal pigmentary dystrophy-cerebellar ataxia-skeletal dysplasia syndrome","type":"exact"},{"name":"short-rib thoracic dysplasia 9 with or without polydactyly","type":"exact"}],"termid":"MONDO:0009964","xrefs":{"Monarch":{"xref_id":"0009964"}}}


id: PBO:0055667
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat and Ig domain containing 3","termid":"PBO:0055667"}


id: GO:0055055
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: D-glucose + H+ = D-glucose + H+. Symporter activity enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy. D-glucose is the dextrorotatory D-enantiomer of glucose.","definition_xrefs":["GOC:ct"],"gene_count":0,"genotype_count":0,"name":"obsolete glucose:proton symporter activity (obsolete GO:0055055)","synonyms":[{"name":"D-glucose:hydrogen symporter activity","type":"exact"}],"termid":"GO:0055055"}


id: PBO:0046066
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 3 subunit K pseudogene 1","termid":"PBO:0046066"}


id: PBO:0012286
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi membrane protein involved in vesicle-mediated transport (predicted)","termid":"PBO:0012286"}


id: GO:0075255
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The set of processes leading to the formation of a thick-walled resting or over-wintering spore produced by the rust fungi (Uredinales) and smut fungi (Ustilaginales) in which karyogamy occurs.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"asexual sporulation resulting in formation of a cellular spore","termid":"GO:0043936"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"teliospore formation","termid":"GO:0075255"}


id: MONDO:0002862
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A sarcoma that involves the bile duct.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"liver sarcoma","termid":"MONDO:0002397"},{"relation_name":"is_a","term_name":"bile duct cancer","termid":"MONDO:0003059"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0002515","MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"bile duct sarcoma","secondary_identifiers":["NCIT:C5029","DOID:4064"],"synonyms":[{"name":"bile duct sarcoma","type":"exact"},{"name":"sarcoma of bile duct","type":"exact"},{"name":"sarcoma of the bile duct","type":"exact"}],"termid":"MONDO:0002862","xrefs":{"Monarch":{"xref_id":"0002862"}}}


id: PBO:0030879
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cellular_component_assembly_during_vegetative_growth","termid":"PBO:0030879"}


id: SO:0000518
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Genomic DNA of immunoglobulin/T-cell receptor gene in rearranged configuration including at least one V-gene and one DJ-gene.","direct_ancestors":[{"relation_name":"has_part","term_name":"V_gene_segment","termid":"SO:0000466"},{"relation_name":"has_part","term_name":"DJ_gene_segment","termid":"SO:0000572"},{"relation_name":"is_a","term_name":"vertebrate_immunoglobulin_T_cell_receptor_rearranged_gene_cluster","termid":"SO:0000938"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V_DJ_cluster","synonyms":[{"name":"V DJ cluster","type":"exact"},{"name":"V-(DJ)-CLUSTER","type":"exact"}],"termid":"SO:0000518"}


id: GO:1990565
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein kinase chaperone complex required for the proper folding, maturation and stabilization of target proteins (mostly signaling protein kinases, some steroid hormone receptors), usually during or immediately after completion of translation. The highly conserved, phosphorylated CDC37-Ser13 (vertebrates) or cdc37-Ser14 (yeast) is essential for complex assembly and target protein binding. CDC37-Ser13 (Ser14) is phosphorylated by Casein kinase II (CK2), which in turn is a target of CDC37 creating a positive feedback loop. Complex binding also prevents rapid ubiquitin-dependent proteosomal degradation of target proteins.","definition_xrefs":["GOC:PARL","GOC:bhm","PMID:22939624","GOC:pad","PMID:21855797"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein folding chaperone complex","termid":"GO:0101031"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005737"],"is_obsolete":false,"name":"HSP90-CDC37 chaperone complex","termid":"GO:1990565"}


id: GO:0052637
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 1-18:3-3-16:0-phosphatidylglycerol = 1-18:3-3-trans-16:1-phosphatidylglycerol + 2 H+. This reaction is the formation of a trans double bond between carbon 3 and carbon 4 (counting from the carboxyl end) of palmitic acid, which is specifically esterified to the sn-2 glyceryl carbon of phosphatidylglycerol.","definition_xrefs":["PMID:19682287","GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete delta 3-trans-hexadecenoic acid phosphatidylglycerol desaturase activity (obsolete GO:0052637)","termid":"GO:0052637"}


id: PR:000050583
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein kinase byr1 (Schizosaccharomyces pombe) that has been phosphorylated at the position equivalent to Ser-22 of the amino acid sequence represented by UniProtKB:P10506. Example: UniProtKB:P10506, Ser-22, MOD:00046.","definition_xrefs":["PomBase:VW","PRO:DAN","PMID:33823663"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"byr1/Phos(S22)","pombase_gene_id":"SPAC1D4.13","synonyms":[{"name":"PomBase_original_PRO_term_name: protein kinase byr1 phosphorylated 1 (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-byr1/Phos:1","type":"exact"},{"name":"UniProtKB:P10506, Ser-22, MOD:00046","type":"narrow"},{"name":"byr1/Phos(S22)","type":"exact"}],"termid":"PR:000050583"}


id: MONDO:0013431
data:
  {"annotated_genes":["SJAG_02607"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87264],"is_not":false,"summary":null,"term":"MONDO:0013431"}]},"cv_name":"mondo","definition":"Any Meier-Gorlin syndrome in which the cause of the disease is a mutation in the CDT1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Meier-Gorlin syndrome","termid":"MONDO:0016817"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02607":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"Meier-Gorlin syndrome 4","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:15711","MEDGEN:462470","DOID:0080515","OMIM:613804","UMLS:C3151120"],"synonyms":[{"name":"CDT1 Meier-Gorlin syndrome","type":"exact"},{"name":"MGORS4","type":"related"},{"name":"Meier-GORLIN syndrome 4","type":"related"},{"name":"Meier-Gorlin syndrome 4","type":"exact"},{"name":"Meier-Gorlin syndrome caused by mutation in CDT1","type":"exact"},{"name":"Meier-Gorlin syndrome type 4","type":"exact"}],"termid":"MONDO:0013431","terms_by_termid":{"MONDO:0013431":null},"xrefs":{"Monarch":{"xref_id":"0013431"}}}


id: PBO:0081768
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 700","termid":"PBO:0081768"}


id: PBO:0079161
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetraspanin 19","termid":"PBO:0079161"}


id: PBO:0059721
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO2 pseudogene 29","termid":"PBO:0059721"}


id: GO:0005503
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to all-trans retinal, a compound that plays an important role in the visual process in most vertebrates. All-trans retinal (trans r., visual yellow) results from the bleaching of rhodopsin by light, in which the 11-cis form is converted to the all-trans form. Retinal is one of the forms of vitamin A.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinal binding","termid":"GO:0016918"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008289"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0008289"],"is_obsolete":false,"name":"all-trans retinal binding","synonyms":[{"name":"all-trans retinaldehyde binding","type":"exact"},{"name":"trans retinal binding","type":"exact"},{"name":"visual yellow binding","type":"exact"},{"name":"vitamin A binding","type":"broad"},{"name":"xanthopsin","type":"related"}],"termid":"GO:0005503"}


id: GO:0031086
data:
  {"annotated_genes":["SJAG_02370","SJAG_04640","SJAG_03023"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[79329,76332],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031087"},{"annotations":[92034],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0036450"}]},"cv_name":"biological_process","definition":"A pathway of degradation of nuclear-transcribed mRNAs that proceeds through a series of steps that is independent of deadenylation, but requires decapping followed by transcript decay, and that can regulate mRNA stability.","definition_xrefs":["PMID:15225542","PMID:15225544","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear-transcribed mRNA catabolic process","termid":"GO:0000956"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02370":null,"SJAG_03023":null,"SJAG_04640":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0016071"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0016071","GO:0010467"],"is_obsolete":false,"name":"nuclear-transcribed mRNA catabolic process, deadenylation-independent decay","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"deadenylation-independent mRNA decay","type":"exact"},{"name":"deadenylylation-independent mRNA decay","type":"exact"},{"name":"mRNA breakdown, deadenylation-independent decay","type":"exact"},{"name":"mRNA catabolic process, deadenylation-independent","type":"exact"},{"name":"mRNA catabolic process, deadenylylation-independent","type":"exact"},{"name":"mRNA catabolism, deadenylation-independent","type":"exact"},{"name":"mRNA catabolism, deadenylation-independent decay","type":"exact"},{"name":"mRNA catabolism, deadenylylation-independent","type":"exact"},{"name":"mRNA degradation, deadenylation-independent decay","type":"exact"},{"name":"nuclear mRNA catabolic process, deadenylation-independent decay","type":"exact"}],"termid":"GO:0031086","terms_by_termid":{"GO:0031087":null,"GO:0036450":null}}


id: GO:0070205
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-enolpyruvoyl-6-hydroxy-2-succinyl-cyclohex-3-ene-1-carboxylate = (1R,6R)-2-succinyl-6-hydroxycyclohexa-2,4-diene-1-carboxylate + pyruvate.","definition_xrefs":["EC:4.2.99.20","RHEA:25597"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity","termid":"GO:0016835"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase activity","secondary_identifiers":["KEGG_REACTION:R08166","MetaCyc:RXN-9310"],"synonyms":[{"name":"2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylic acid synthase activity","type":"related"},{"name":"6-hydroxy-2-succinylcyclohexa-2,4-diene-1-carboxylate synthase activity","type":"related"},{"name":"MenH","type":"related"},{"name":"SHCHC synthase activity","type":"related"},{"name":"YfbB","type":"related"}],"termid":"GO:0070205"}


id: MONDO:0015616
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare genetic intestinal disease (obsolete MONDO:0015616)","secondary_identifiers":["Orphanet:165655"],"synonyms":[{"name":"genetic intestinal disease","type":"exact"}],"termid":"MONDO:0015616","xrefs":{"Monarch":{"xref_id":"0015616"}}}


id: PBO:0077473
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 192","termid":"PBO:0077473"}


id: GO:0097457
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An axon of a hippocampal granule cell, including dentate gyrus granule cell and CA3 granule cell, characterized by expansions (mossy fiber expansions) giving the fibers a mossy appearance. These unmyelinated axons were first described by Ramon y Cajal.","definition_xrefs":["NIF_Subcellular:nlx_subcell_100312","PMID:20554881","PMID:24336151","PMID:17765709"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axon","termid":"GO:0030424"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"hippocampal mossy fiber","termid":"GO:0097457"}


id: GO:0070305
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cGMP (cyclic GMP, guanosine 3',5'-cyclophosphate) stimulus.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to purine-containing compound","termid":"GO:0014074"},{"relation_name":"is_a","term_name":"response to organophosphorus","termid":"GO:0046683"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to cGMP","synonyms":[{"name":"response to 3',5' cGMP","type":"exact"},{"name":"response to 3',5'-cGMP","type":"exact"},{"name":"response to cyclic GMP","type":"exact"},{"name":"response to guanosine 3',5'-cyclophosphate","type":"exact"}],"termid":"GO:0070305"}


id: GO:1903700
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a caecum over time, from its formation to the mature structure.","definition_xrefs":["GO_REF:0000094","ISBN:0-683-40008-8","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"caecum development","synonyms":[{"name":"blind intestine development","type":"related"},{"name":"blindgut development","type":"related"},{"name":"caeca development","type":"narrow"},{"name":"ceca development","type":"narrow"},{"name":"cecum development","type":"exact"},{"name":"intestinum caecum development","type":"related"},{"name":"intestinum crassum caecum development","type":"exact"},{"name":"intestinum crassum cecum development","type":"related"}],"termid":"GO:1903700"}


id: PBO:0053465
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 427","termid":"PBO:0053465"}


id: GO:0010681
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of cinnamic acid, 3-phenyl-2-propenoic acid, which is then utilized in the metabolism of stilbene.","definition_xrefs":["GOC:dph","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete cinnamic acid biosynthetic process involved in stilbene metabolism (obsolete GO:0010681)","termid":"GO:0010681"}


id: FYPO:0006371
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the duration of prophase of the first meiotic nuclear division is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cell cycle phase","termid":"FYPO:0003833"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal duration of meiotic prophase I","termid":"FYPO:0006371"}


id: FYPO:0009047
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of dimethyl sulfoxide than normal.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002682"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000139","FYPO:0000003","FYPO:0002682"],"is_obsolete":false,"name":"resistance to dimethyl sulfoxide","synonyms":[{"name":"resistance to dimethyl sulfoxide during mitotic cell cycle","type":"related"},{"name":"resistance to dimethyl sulfoxide during vegetative growth","type":"exact"},{"name":"resistant to dimethyl sulfoxide","type":"exact"}],"termid":"FYPO:0009047"}


id: MONDO:0005155
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disorder characterized by replacement of the liver parenchyma with fibrous tissue and regenerative nodules. It is usually caused by alcoholism, hepatitis B, and hepatitis C. Complications include the development of ascites, esophageal varices, bleeding, and hepatic encephalopathy.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"liver disorder","termid":"MONDO:0005154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0002515"],"is_obsolete":false,"name":"cirrhosis of liver","secondary_identifiers":["NANDO:2100268","SCTID:19943007","ICD9:571.5","MEDGEN:7368","NANDO:2200937","NCIT:C2951","MESH:D008103","UMLS:C0023890","EFO:0001422","DOID:5082"],"synonyms":[{"name":"cirrhosis","type":"exact"},{"name":"cirrhosis of liver","type":"exact"},{"name":"liver cirrhosis","type":"related"}],"termid":"MONDO:0005155","xrefs":{"Monarch":{"xref_id":"0005155"}}}


id: PBO:0082906
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cystathionine gamma-synthase, converts cysteine into cystathionine; STR2 has a paralog, YML082W, that arose from the whole genome duplication","termid":"PBO:0082906"}


id: PBO:0087846
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Topoisomerase I; nuclear enzyme that relieves torsional strain in DNA by cleaving and re-sealing the phosphodiester backbone; relaxes both positively and negatively supercoiled DNA; functions in replication, transcription, and recombination; role in processing ribonucleoside monophosphates in genomic DNA into irreversible single-strand breaks; enzymatic activity and interaction with Nsr1p are negatively regulated by polyphosphorylation","termid":"PBO:0087846"}


id: GO:0090138
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any cell-cell adhesion process that modulates the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins.","definition_xrefs":["GOC:ascb_2009","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of actin cytoskeleton organization","termid":"GO:0032956"},{"relation_name":"is_a","term_name":"cell-cell adhesion","termid":"GO:0098609"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0030036"},{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0030036","GO:0007010","GO:0007155","GO:0008150"],"is_obsolete":false,"name":"regulation of actin cytoskeleton organization by cell-cell adhesion","synonyms":[{"name":"regulation of actin cytoskeleton organisation by cell-cell adhesion","type":"exact"}],"termid":"GO:0090138"}


id: GO:0072731
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a papulacandin B stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to lipid","termid":"GO:0071396"},{"relation_name":"is_a","term_name":"response to papulacandin B","termid":"GO:0072730"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to papulacandin B","termid":"GO:0072731"}


id: PATO:0001935
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's being roundish, a little inclining to be oblong.","definition_xrefs":["ISBN:0881923214"],"direct_ancestors":[{"relation_name":"is_a","term_name":"circular","termid":"PATO:0000411"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"obtuse","synonyms":[{"name":"roundish","type":"exact"}],"termid":"PATO:0001935"}


id: GO:0044218
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The cell membrane of a secondary organism with which the first organism is interacting.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"other organism part","termid":"GO:0044217"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"other organism cell membrane","secondary_identifiers":["GO:0044279"],"synonyms":[{"name":"foreign membrane","type":"related"},{"name":"other organism membrane","type":"broad"}],"termid":"GO:0044218"}


id: GO:0034933
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 1-hydroxy-6-methoxypyrene + XCH3 = 1,6-dimethoxypyrene + HX.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 1-hydroxy-6-methoxypyrene methyltransferase activity (obsolete GO:0034933)","termid":"GO:0034933"}


id: PBO:0004812
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.4.1.117","termid":"PBO:0004812"}


id: MONDO:1012364
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Laron dwarfism, non-human animal","termid":"MONDO:1011958"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Laron dwarfism, pig","secondary_identifiers":["OMIA:001323-9823"],"termid":"MONDO:1012364","xrefs":{"Monarch":{"xref_id":"1012364"}}}


id: MONDO:0002940
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A basal cell carcinoma arising from the perianal skin. Local excision is the treatment of choice. Metastases are extremely rare.","definition_xrefs":["NCIT:C7473"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anal margin squamous cell carcinoma","termid":"MONDO:0001470"},{"relation_name":"is_a","term_name":"skin basal cell carcinoma","termid":"MONDO:0005341"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005093","MONDO:0004335"],"is_obsolete":false,"name":"anal margin basal cell carcinoma","secondary_identifiers":["MEDGEN:231371","UMLS:C1332269","DOID:4283"],"synonyms":[{"name":"anal margin basal cell carcinoma","type":"exact"},{"name":"basal cell carcinoma of anal margin","type":"exact"},{"name":"basal cell carcinoma of perianal skin","type":"exact"},{"name":"basal cell carcinoma of the anal margin","type":"exact"},{"name":"basal cell carcinoma of the perianal skin","type":"exact"},{"name":"perianal skin basal cell carcinoma","type":"exact"},{"name":"perianal skin skin basal cell carcinoma","type":"exact"},{"name":"skin basal cell carcinoma of perianal skin","type":"exact"}],"termid":"MONDO:0002940","xrefs":{"Monarch":{"xref_id":"0002940"}}}


id: FYPO:0000371
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which RNA modification does not occur. All RNA modification may be abolished, or one or more specific RNA modifications may be selectively affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal RNA modification","termid":"FYPO:0000370"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000294","FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"abolished RNA modification","synonyms":[{"name":"RNA modification abolished","type":"exact"},{"name":"RNA modification abolished during vegetative growth","type":"exact"},{"name":"RNA modification: absent","type":"related"},{"name":"abolished RNA modification during mitotic cell cycle","type":"related"},{"name":"absent RNA modification","type":"exact"}],"termid":"FYPO:0000371"}


id: PBO:0038537
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"abhydrolase domain containing 12B","termid":"PBO:0038537"}


id: PBO:0067389
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 494, pseudogene","termid":"PBO:0067389"}


id: PBO:0048154
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"forty-two-three domain containing 1 pseudogene 1","termid":"PBO:0048154"}


id: GO:1990589
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Transcription factor complex consisting of ATF4 and CREB1 subunits that is capable of binding to cAMP response element (CRE) (consensus: 5'-GTGACGT[AC][AG]-3') as part of the positive regulation of transcription. Regulatory targets include the GRP78 (HSPA5) promoter in humans, whose activation by this complex is part of the ER stress response pathway.","definition_xrefs":["GOC:bhm","PMID:12871976"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II transcription regulator complex","termid":"GO:0090575"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005634","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"ATF4-CREB1 transcription factor complex","termid":"GO:1990589"}


id: GO:0070740
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the posttranslational transfer of one or more glutamate residues to the gamma-carboxyl group(s) of one or more specific glutamate residues on a tubulin molecule.","definition_xrefs":["GOC:mah","PMID:19524510"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-glutamic acid ligase activity","termid":"GO:0070739"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0140096","GO:0016874","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"tubulin-glutamic acid ligase activity","secondary_identifiers":["Reactome:R-HSA-8955869","EC:6.3.2.61","Reactome:R-HSA-8865774"],"synonyms":[{"name":"tubulin glutamylase activity","type":"exact"},{"name":"tubulin-glutamate ligase activity","type":"exact"}],"termid":"GO:0070740"}


id: PBO:0084849
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial ribosomal protein of the large subunit; involved together with Mrp7p in assembly of cytochrome c oxidase","termid":"PBO:0084849"}


id: MONDO:0013638
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Warburg micro syndrome in which the cause of the disease is a mutation in the RAB18 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Warburg micro syndrome","termid":"MONDO:0016649"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0002320","MONDO:0006025"],"is_obsolete":false,"name":"Warburg micro syndrome 3","secondary_identifiers":["GARD:15778","DOID:0110718","MEDGEN:481833","OMIM:614222","UMLS:C3280203"],"synonyms":[{"name":"RAB18 Warburg micro syndrome","type":"exact"},{"name":"WARBM3","type":"exact"},{"name":"WARBURG micro syndrome 3","type":"related"},{"name":"Warburg micro syndrome 3","type":"exact"},{"name":"Warburg micro syndrome caused by mutation in RAB18","type":"exact"},{"name":"Warburg micro syndrome type 3","type":"exact"},{"name":"micro syndrome 3","type":"exact"}],"termid":"MONDO:0013638","xrefs":{"Monarch":{"xref_id":"0013638"}}}


id: PBO:0112906
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pig-X, glycosylphosphatidylinositol-mannosyltransferase I complex subunit pig-X","termid":"PBO:0112906"}


id: GO:0050531
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-(alpha-D-mannosyl)-3-phosphoglycerate + H2O = 2-(alpha-D-mannosyl)-D-glycerate + phosphate.","definition_xrefs":["RHEA:19309","EC:3.1.3.70"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase activity","termid":"GO:0016791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0016788","GO:0003824"],"is_obsolete":false,"name":"mannosyl-3-phosphoglycerate phosphatase activity","secondary_identifiers":["MetaCyc:3.1.3.70-RXN","KEGG_REACTION:R05790"],"synonyms":[{"name":"alpha-D-mannosyl-3-phosphoglycerate phosphohydrolase activity","type":"related"}],"termid":"GO:0050531"}


id: FYPO:0007100
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the first meiotic nuclear division is arrested in prophase I under conditions where arrest does not normally occur, and with telomeres clustered at the spindle pole body. Telomere clustering at the SPB indicates that the cell has reached or passed the pachytene stage.","definition_xrefs":["PomBase:mah","PMID:21449049"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormally arrested meiosis I","termid":"FYPO:0002817"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0000631"],"is_obsolete":false,"name":"abnormal cell cycle arrest in meiotic prophase I with clustered telomeres","synonyms":[{"name":"abnormal cell cycle arrest in meiotic prophase I at or after pachytene","type":"exact"},{"name":"abnormal cell cycle arrest in meiotic prophase I with telomeres clustered at SPB","type":"exact"},{"name":"abnormal cell cycle arrest in meiotic prophase I with telomeres clustered at spindle pole bodies","type":"exact"}],"termid":"FYPO:0007100"}


id: PBO:0063314
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prostate cancer associated HIP1 interacting lncRNA","termid":"PBO:0063314"}


id: FYPO:0002763
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of tRNA (guanine(9)-N(1))-methyltransferase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal tRNA methyltransferase activity","termid":"FYPO:0001771"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000707","FYPO:0001985","FYPO:0000654","FYPO:0000661"],"is_obsolete":false,"name":"abnormal tRNA (guanine(9)-N(1))-methyltransferase activity","termid":"FYPO:0002763"}


id: PBO:0084640
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Microsomal beta-keto-reductase; contains oleate response element (ORE) sequence in the promoter region; mutants exhibit reduced VLCFA synthesis, accumulate high levels of dihydrosphingosine, phytosphingosine and medium-chain ceramides","termid":"PBO:0084640"}


id: MONDO:0030473
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"developmental and epileptic encephalopathy","termid":"MONDO:0100062"},{"relation_name":"is_a","term_name":"ATP1A3-associated neurological disorder","termid":"MONDO:0700002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"},{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0005027","MONDO:0700092"],"is_obsolete":false,"name":"developmental and epileptic encephalopathy 99","secondary_identifiers":["OMIM:619606","MEDGEN:1794228","UMLS:C5562018","DOID:0070385"],"synonyms":[{"name":"DEE99","type":"exact"}],"termid":"MONDO:0030473","xrefs":{"Monarch":{"xref_id":"0030473"}}}


id: PBO:0000263
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase activating protein (predicted)","termid":"PBO:0000263"}


id: PBO:0049151
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione peroxidase 8 (putative)","termid":"PBO:0049151"}


id: GO:1902307
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of sodium ion transmembrane transport.","definition_xrefs":["GOC:rl","GOC:TermGenie","GOC:BHF","PMID:18591664","GOC:mtg_cardiac_conduct_nov11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of sodium ion transport","termid":"GO:0010765"},{"relation_name":"is_a","term_name":"regulation of sodium ion transmembrane transport","termid":"GO:1902305"},{"relation_name":"is_a","term_name":"positive regulation of cation transmembrane transport","termid":"GO:1904064"},{"relation_name":"positively_regulates","term_name":"sodium ion transmembrane transport","termid":"GO:0035725"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0055085","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of sodium ion transmembrane transport","synonyms":[{"name":"activation of sodium ion membrane transport","type":"narrow"},{"name":"activation of sodium ion transmembrane transport","type":"narrow"},{"name":"positive regulation of sodium ion membrane transport","type":"exact"},{"name":"up regulation of sodium ion membrane transport","type":"exact"},{"name":"up regulation of sodium ion transmembrane transport","type":"exact"},{"name":"up-regulation of sodium ion membrane transport","type":"exact"},{"name":"up-regulation of sodium ion transmembrane transport","type":"exact"},{"name":"upregulation of sodium ion membrane transport","type":"exact"},{"name":"upregulation of sodium ion transmembrane transport","type":"exact"}],"termid":"GO:1902307"}


id: GO:0008775
data:
  {"annotated_genes":["SJAG_02985","SJAG_02769"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[75933,77170],"is_not":false,"summary":null,"term":"GO:0008775"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: acyl-CoA + acetate = a fatty acid anion + acetyl-CoA.","definition_xrefs":["EC:2.8.3.8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CoA-transferase activity","termid":"GO:0008410"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02769":null,"SJAG_02985":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016782","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"acetate CoA-transferase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:ACECOATRANS-RXN","RHEA:13381","UM-BBD_enzymeID:r0012","Reactome:R-HSA-2066788"],"synonyms":[{"name":"acetate coenzyme A-transferase activity","type":"related"},{"name":"acetyl-CoA:acetoacetate CoA transferase activity","type":"related"},{"name":"acyl-CoA:acetate CoA-transferase activity","type":"related"},{"name":"butyryl CoA:acetate CoA transferase activity","type":"related"},{"name":"butyryl coenzyme A transferase activity","type":"related"},{"name":"succinyl-CoA:acetate CoA transferase activity","type":"related"}],"termid":"GO:0008775","terms_by_termid":{"GO:0008775":null}}


id: GO:1903724
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of centriole elongation.","definition_xrefs":["GOC:als","GO_REF:0000058","PMID:20616062","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of centriole replication","termid":"GO:0046601"},{"relation_name":"is_a","term_name":"regulation of centriole elongation","termid":"GO:1903722"},{"relation_name":"positively_regulates","term_name":"centriole elongation","termid":"GO:0061511"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"positively_regulates","termid":"GO:0007010"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0007010","GO:0007049"],"is_obsolete":false,"name":"positive regulation of centriole elongation","synonyms":[{"name":"activation of centriole elongation","type":"narrow"},{"name":"up regulation of centriole elongation","type":"exact"},{"name":"up-regulation of centriole elongation","type":"exact"},{"name":"upregulation of centriole elongation","type":"exact"}],"termid":"GO:1903724"}


id: PBO:0029218
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_rDNA","termid":"PBO:0029218"}


id: FYPO:0006465
data:
  {"alleles_by_uniquename":{"SJAG_03689:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03689","name":"dcr1delta","uniquename":"SJAG_03689:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[119540],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0004205"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of mature non-coding RNA (ncRNA) measured in a cell differs from normal when the cell is in the vegetative growth phase of the life cycle. Total ncRNA or a specific ncRNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered RNA level during vegetative growth","termid":"FYPO:0001326"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03689":null},"genotype_count":1,"genotypes_by_uniquename":{"dcr1delta":{"display_name":"dcr1delta","display_uniquename":"dcr1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03689:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0006551","FYPO:0000002"],"is_obsolete":false,"name":"altered mature ncRNA level during vegetative growth","references_by_uniquename":{"PMID:35226668":null},"single_locus_annotated_genes":["SJAG_03689"],"single_locus_genotype_uniquenames":["dcr1delta"],"synonyms":[{"name":"abnormal ncRNA level during vegetative growth","type":"broad"},{"name":"altered cellular mature ncRNA level during vegetative growth","type":"exact"},{"name":"altered mature ncRNA level during mitotic cell cycle","type":"related"},{"name":"altered mature ncRNA transcript level during vegetative growth","type":"exact"},{"name":"altered mature non-coding RNA level during vegetative growth","type":"exact"}],"termid":"FYPO:0006465","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000162":null,"FYPO:0004205":null,"FYPO_EXT:0000001":null}}


id: PBO:0085170
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Oleate-activated transcription factor; subunit of a heterodimeric complex with Pip2p, which binds to oleate-response elements (ORE) in the promoter of genes involved in beta-oxidation of fatty acids, peroxisome organization and biogenesis, activating transcription in the presence of oleate; regulates chromatin silencing at telomeres; involved in diauxic shift; OAF1 has a paralog, PIP2, that arose from the whole genome duplication","termid":"PBO:0085170"}


id: MOD:01521
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification reporter fragment produced by an Applied Biosystems iTRAQ4plex reagent derivatized residue.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modification reporter fragment","termid":"MOD:01520"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iTRAQ4plex reporter fragment","termid":"MOD:01521"}


id: PBO:0079506
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thioredoxin pseudogene 4","termid":"PBO:0079506"}


id: FYPO:0005219
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a transcript, i.e. an RNA molecule synthesized on a DNA template by RNA polymerase, is shorter than normal.","definition_xrefs":["PomBase:mah","SO:0000673","PMID:26582768"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal transcript length","termid":"FYPO:0003048"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0003048"},{"rel_name":"output_of","termid":"FYPO:0000294"}],"interesting_parent_ids":["FYPO:0000294","FYPO:0001985","FYPO:0003048"],"is_obsolete":false,"name":"decreased transcript length","synonyms":[{"name":"short transcript","type":"exact"},{"name":"shortened transcript","type":"exact"}],"termid":"FYPO:0005219"}


id: PBO:0001392
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial glycerol dehydrogenase Gld1","termid":"PBO:0001392"}


id: GO:0043328
data:
  {"annotated_genes":["SJAG_01981","SJAG_00821","SJAG_03783","SJAG_03756","SJAG_04349","SJAG_04489","SJAG_02117","SJAG_04936","SJAG_03250","SJAG_01242","SJAG_01586","SJAG_03892","SJAG_04024","SJAG_05303","SJAG_01281","SJAG_04912","SJAG_00416","SJAG_02584","SJAG_02912"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[71327,71395,72567,72708,73712,73733,78070,78586,78821,88314,88484,91868,92003,96325,98318,101253,106935,109752,115092],"is_not":false,"summary":null,"term":"GO:0043328"}]},"cv_name":"biological_process","definition":"The process of directing proteins towards the vacuole that contributes to protein catabolism via the multivesicular body (MVB) pathway.","definition_xrefs":["PMID:11511343","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein transport","termid":"GO:0006886"},{"relation_name":"is_a","term_name":"late endosome to vacuole transport via multivesicular body sorting pathway","termid":"GO:0032511"},{"relation_name":"is_a","term_name":"establishment of protein localization to vacuole","termid":"GO:0072666"},{"relation_name":"part_of","term_name":"ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway","termid":"GO:0043162"}],"gene_count":19,"genes_by_uniquename":{"SJAG_00416":null,"SJAG_00821":null,"SJAG_01242":null,"SJAG_01281":null,"SJAG_01586":null,"SJAG_01981":null,"SJAG_02117":null,"SJAG_02584":null,"SJAG_02912":null,"SJAG_03250":null,"SJAG_03756":null,"SJAG_03783":null,"SJAG_03892":null,"SJAG_04024":null,"SJAG_04349":null,"SJAG_04489":null,"SJAG_04912":null,"SJAG_04936":null,"SJAG_05303":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"part_of","termid":"GO:0030163"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810","GO:0030163","GO:0016192"],"is_obsolete":false,"name":"protein transport to vacuole involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"protein targeting to vacuole during ubiquitin-dependent protein breakdown via the MVB pathway","type":"exact"},{"name":"protein targeting to vacuole during ubiquitin-dependent protein catabolic process via the MVB pathway","type":"related"},{"name":"protein targeting to vacuole during ubiquitin-dependent protein degradation via the MVB pathway","type":"exact"},{"name":"protein vacuolar targeting during ubiquitin-dependent protein catabolic process via the MVB pathway","type":"exact"},{"name":"protein vacuolar targeting during ubiquitin-dependent protein catabolism via the MVB pathway","type":"exact"},{"name":"protein-vacuolar targeting during ubiquitin-dependent protein breakdown via the MVB pathway","type":"exact"},{"name":"protein-vacuolar targeting during ubiquitin-dependent protein degradation via the MVB pathway","type":"exact"},{"name":"protein-vacuole targeting during ubiquitin-dependent protein catabolic process via the MVB pathway","type":"exact"},{"name":"protein-vacuole targeting during ubiquitin-dependent protein catabolism via the MVB pathway","type":"exact"}],"termid":"GO:0043328","terms_by_termid":{"GO:0043328":null}}


id: GO:0047409
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: H2O + 1-(1-alkenyl)-sn-glycero-3-phosphoethanolamine = sn-glycero-3-phosphoethanolamine + an aldehyde.","definition_xrefs":["EC:3.3.2.5","MetaCyc:3.3.2.5-RXN"],"gene_count":0,"genotype_count":0,"name":"obsolete alkenylglycerophosphoethanolamine hydrolase activity (obsolete GO:0047409)","synonyms":[{"name":"1-(1-alkenyl)-sn-glycero-3-phosphoethanolamine aldehydohydrolase activity","type":"related"}],"termid":"GO:0047409"}


id: PBO:0110421
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TIAL1 pseudogene","termid":"PBO:0110421"}


id: PBO:0055011
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2426","termid":"PBO:0055011"}


id: PBO:0055068
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2484","termid":"PBO:0055068"}


id: PBO:0117102
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BLK antisense RNA 1","termid":"PBO:0117102"}


id: PBO:0088318
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"La protein, tRNA chaperone Sla1","termid":"PBO:0088318"}


id: MONDO:0016278
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Carcinosarcoma of the cervix uteri is a rare, malignant, mixed epithelial and mesenchymal tumor, located in the cervix uteri, composed of an admixture of carcinomatous and sarcomatous elements. It usually presents with abnormal vaginal bleeding and a round, well-defined, gray to yellowish-white, pedunculated polypoid mass protruding through the cervical canal. Association with HPV infection (especially serotype 16) has been frequently reported.","definition_xrefs":["Orphanet:213787"],"gene_count":0,"genotype_count":0,"name":"obsolete carcinosarcoma of the cervix uteri (obsolete MONDO:0016278)","termid":"MONDO:0016278","xrefs":{"Monarch":{"xref_id":"0016278"}}}


id: PBO:0051402
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda like polypeptide 2, pseudogene","termid":"PBO:0051402"}


id: GO:0060911
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The commitment of cells to specific cardiac cell fates and their capacity to differentiate into cardiac cells. Cardiac cells are cells that comprise the organ which pumps blood through the circulatory system.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate commitment","termid":"GO:0045165"},{"relation_name":"part_of","term_name":"cardiocyte differentiation","termid":"GO:0035051"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardiac cell fate commitment","synonyms":[{"name":"cardiocyte cell fate commitment","type":"exact"}],"termid":"GO:0060911"}


id: MONDO:1010910
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Muscular dystrophy that occurs in turkey.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bird disease","termid":"MONDO:0024905"},{"relation_name":"is_a","term_name":"muscular dystrophy, non-human animal","termid":"MONDO:0024965"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"muscular dystrophy, turkey","secondary_identifiers":["OMIA:000679-9103"],"termid":"MONDO:1010910","xrefs":{"Monarch":{"xref_id":"1010910"}}}


id: MONDO:0009531
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete lip prints (obsolete MONDO:0009531)","secondary_identifiers":["OMIM:247150"],"synonyms":[{"name":"lip prints","type":"exact"}],"termid":"MONDO:0009531","xrefs":{"Monarch":{"xref_id":"0009531"}}}


id: MONDO:1010272
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Renal agenesis that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of development or morphogenesis, non-human animal","termid":"MONDO:1011313"},{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"renal disease, non-human animal","termid":"MONDO:1011909"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"renal agenesis, non-human animal","secondary_identifiers":["OMIA:002007"],"termid":"MONDO:1010272","xrefs":{"Monarch":{"xref_id":"1010272"}}}


id: GO:0061941
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of c-di-GMP signaling.","definition_xrefs":["PMID:22864416"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell communication","termid":"GO:0010647"},{"relation_name":"is_a","term_name":"positive regulation of signaling","termid":"GO:0023056"},{"relation_name":"is_a","term_name":"regulation of c-di-GMP signaling","termid":"GO:0061940"},{"relation_name":"positively_regulates","term_name":"c-di-GMP signaling","termid":"GO:0061939"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of c-di-GMP signaling","termid":"GO:0061941"}


id: PBO:0113088
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytoplasmic RNA-binding protein; shuttles between nucleus and cytoplasm and is exported from the nucleus in an mRNA export-dependent manner; associates with translating ribosomes; involved in heme regulation of Hap1p as a component of the HMC complex, also involved in the organization of actin filaments; contains a La motif; role in preventing L-A mycovirus pathogenesis; SRO9 has a paralog, SLF1, that arose from the whole genome duplication","termid":"PBO:0113088"}


id: PBO:0087151
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA duplex-sensing translocase; ATP-dependent 3'-5' RNA helicase of the DExD/H family; involved in nuclear RNA processing and degradation as a component of TRAMP complex and in TRAMP-independent processes; TRAMP unwinds RNA duplexes, with Mtr4p unwinding activity stimulated by Pap2p/Air2p but not dependent on ongoing polyadenylation; contains an arch domain, with two coiled-coil arms/stalks and a globular fist/KOW domain, which has RNA binding activity and is required for 5.8S rRNA processing","termid":"PBO:0087151"}


id: GO:0006869
data:
  {"annotated_genes":["SJAG_00355","SJAG_03774","SJAG_04370","SJAG_03690","SJAG_01945","SJAG_02323","SJAG_01731","SJAG_03416","SJAG_03050","SJAG_00230","SJAG_01437","SJAG_03721","SJAG_02132","SJAG_05209","SJAG_00587","SJAG_03209","SJAG_01590","SJAG_02581","SJAG_01095","SJAG_01305","SJAG_00261","SJAG_06440","SJAG_01470","SJAG_01229","SJAG_02375","SJAG_00576","SJAG_03741","SJAG_03172","SJAG_03718","SJAG_00669","SJAG_05268","SJAG_03710","SJAG_04413","SJAG_02897","SJAG_01329","SJAG_01116","SJAG_01722","SJAG_01225","SJAG_03851","SJAG_03746","SJAG_01407","SJAG_02516","SJAG_02114","SJAG_00018","SJAG_02943","SJAG_00176","SJAG_04734","SJAG_02957","SJAG_03338","SJAG_00589","SJAG_16459"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[68999,102696],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140331"},{"annotations":[75142],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015917"},{"annotations":[73722,109997,74655,117895,73278,73936],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035621"},{"annotations":[94786,77371],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034203"},{"annotations":[108580,116601,109740,102973,111711,57501,94609],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120009"},{"annotations":[91265,116624,98988,109028,106220,107889,97848,97914,109902,104405,100892,89591,101643,108018,107113],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120010"},{"annotations":[106703],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120011"},{"annotations":[62384,77328,72367],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032366"},{"annotations":[90887,60066,99833,109888,90886,102575,90881,90884,101645,90879,90885,75161,90883,72517,90880,73238,90882,73398,74903],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045332"},{"annotations":[73574],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0017121"},{"annotations":[108583,116604,109742,94612,102975,111713],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015918"}]},"cv_name":"biological_process","definition":"The directed movement of lipids into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Lipids are compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transport","termid":"GO:0006810"},{"relation_name":"part_of","term_name":"lipid localization","termid":"GO:0010876"}],"gene_count":51,"genes_by_uniquename":{"SJAG_00018":null,"SJAG_00176":null,"SJAG_00230":null,"SJAG_00261":null,"SJAG_00355":null,"SJAG_00576":null,"SJAG_00587":null,"SJAG_00589":null,"SJAG_00669":null,"SJAG_01095":null,"SJAG_01116":null,"SJAG_01225":null,"SJAG_01229":null,"SJAG_01305":null,"SJAG_01329":null,"SJAG_01407":null,"SJAG_01437":null,"SJAG_01470":null,"SJAG_01590":null,"SJAG_01722":null,"SJAG_01731":null,"SJAG_01945":null,"SJAG_02114":null,"SJAG_02132":null,"SJAG_02323":null,"SJAG_02375":null,"SJAG_02516":null,"SJAG_02581":null,"SJAG_02897":null,"SJAG_02943":null,"SJAG_02957":null,"SJAG_03050":null,"SJAG_03172":null,"SJAG_03209":null,"SJAG_03338":null,"SJAG_03416":null,"SJAG_03690":null,"SJAG_03710":null,"SJAG_03718":null,"SJAG_03721":null,"SJAG_03741":null,"SJAG_03746":null,"SJAG_03774":null,"SJAG_03851":null,"SJAG_04370":null,"SJAG_04413":null,"SJAG_04734":null,"SJAG_05209":null,"SJAG_05268":null,"SJAG_06440":null,"SJAG_16459":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"lipid transport","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"secondary_identifiers":["Reactome:R-HSA-1369062"],"termid":"GO:0006869","terms_by_termid":{"GO:0015917":null,"GO:0015918":null,"GO:0017121":null,"GO:0032366":null,"GO:0034203":null,"GO:0035621":null,"GO:0045332":null,"GO:0120009":null,"GO:0120010":null,"GO:0120011":null,"GO:0140331":null}}


id: MONDO:0002979
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A well differentiated squamous cell carcinoma characterized by a papillary, exophytic growth pattern and hyperkeratosis. The most commonly affected anatomic sites are the larynx, penis, cervix, vagina, and vulva.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"squamous cell carcinoma","termid":"MONDO:0005096"},{"relation_name":"is_a","term_name":"papillary carcinoma","termid":"MONDO:0006509"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"papillary squamous carcinoma","secondary_identifiers":["ICDO:8052/3","UMLS:C0334244","DOID:4385","MEDGEN:83115","NCIT:C4102"],"synonyms":[{"name":"papillary epidermoid carcinoma","type":"exact"},{"name":"papillary epidermoid cell carcinoma","type":"exact"},{"name":"papillary squamous carcinoma","type":"exact"},{"name":"papillary squamous cell carcinoma","type":"exact"}],"termid":"MONDO:0002979","xrefs":{"Monarch":{"xref_id":"0002979"}}}


id: PBO:0017537
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae STE7","termid":"PBO:0017537"}


id: PBO:0064218
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase C beta 3","termid":"PBO:0064218"}


id: MONDO:1011984
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"vision disorder, non-human animal","termid":"MONDO:1011367"},{"relation_name":"is_a","term_name":"skeletal dysplasia, non-human animal","termid":"MONDO:1012973"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinal and skeletal dysplasia, non-human animal","secondary_identifiers":["OMIA:001182"],"termid":"MONDO:1011984","xrefs":{"Monarch":{"xref_id":"1011984"}}}


id: FYPO:0007572
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the cortical endoplasmic reticulum (ER) is dissociated from the plasma membrane. Normally, cortical ER tubules are closely juxtaposed to the plasma membrane.","definition_xrefs":["PomBase:mah","PMID:19571115"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal endoplasmic reticulum morphology","termid":"FYPO:0000354"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"cortical endoplasmic reticulum detached from plasma membrane","synonyms":[{"name":"cortical ER detached from plasma membrane","type":"exact"},{"name":"cortical endoplasmic reticulum detached from plasma membrane during mitotic cell cycle","type":"related"},{"name":"cortical endoplasmic reticulum detached from plasma membrane during vegetative growth","type":"exact"},{"name":"cortical endoplasmic reticulum dissociated from plasma membrane","type":"exact"}],"termid":"FYPO:0007572"}


id: PBO:0029960
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cytochrome-c_oxidase_activity","termid":"PBO:0029960"}


id: FYPO:0000704
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the binding of one protein to another is abnormal. The relevant proteins may include the one encoded by the mutated gene, or may both be encoded by different genes.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-protein interaction phenotype","termid":"FYPO:0000702"},{"relation_name":"is_a","term_name":"abnormal molecular function","termid":"FYPO:0000707"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000702"}],"interesting_parent_ids":["FYPO:0000702","FYPO:0000652","FYPO:0001985","FYPO:0000707"],"is_obsolete":false,"name":"abnormal protein-protein interaction","synonyms":[{"name":"abnormal protein binding","type":"exact"}],"termid":"FYPO:0000704"}


id: GO:0006099
data:
  {"annotated_genes":["SJAG_03920","SJAG_02464","SJAG_01671","SJAG_01922","SJAG_03163","SJAG_01630","SJAG_00260","SJAG_01524","SJAG_02398","SJAG_01895","SJAG_01753","SJAG_06382","SJAG_03588","SJAG_04843","SJAG_03813"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[61773,62886,64630,66526,70737,71174,72149,73535,74534,74699,75721,76187,77194,79671,107109],"is_not":false,"summary":null,"term":"GO:0006099"}]},"cv_name":"biological_process","definition":"A nearly universal metabolic pathway in which the acetyl group of acetyl coenzyme A is effectively oxidized to two CO2 and four pairs of electrons are transferred to coenzymes. The acetyl group combines with oxaloacetate to form citrate, which undergoes successive transformations to isocitrate, 2-oxoglutarate, succinyl-CoA, succinate, fumarate, malate, and oxaloacetate again, thus completing the cycle. In eukaryotes the tricarboxylic acid is confined to the mitochondria. See also glyoxylate cycle.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary metabolic process","termid":"GO:0044238"},{"relation_name":"part_of","term_name":"aerobic respiration","termid":"GO:0009060"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00260":null,"SJAG_01524":null,"SJAG_01630":null,"SJAG_01671":null,"SJAG_01753":null,"SJAG_01895":null,"SJAG_01922":null,"SJAG_02398":null,"SJAG_02464":null,"SJAG_03163":null,"SJAG_03588":null,"SJAG_03813":null,"SJAG_03920":null,"SJAG_04843":null,"SJAG_06382":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0008150","GO:0006091"],"is_obsolete":false,"name":"tricarboxylic acid cycle","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-71403","Wikipedia:Tricarboxylic_acid_cycle"],"synonyms":[{"name":"Krebs cycle","type":"exact"},{"name":"TCA cycle","type":"exact"},{"name":"citric acid cycle","type":"exact"},{"name":"oxidative TCA cycle","type":"exact"}],"termid":"GO:0006099","terms_by_termid":{"GO:0006099":null}}


id: MONDO:1010958
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ameloblastoma that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"canine neoplasm","termid":"MONDO:0700139"},{"relation_name":"is_a","term_name":"ameloblastoma, non-human animal","termid":"MONDO:1010220"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ameloblastoma, dog","secondary_identifiers":["OMIA:002171-9615"],"termid":"MONDO:1010958","xrefs":{"Monarch":{"xref_id":"1010958"}}}


id: FYPO:0001342
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype that affects a response to a stimulus in the vegetative growth phase of the life cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response phenotype","termid":"FYPO:0000298"},{"relation_name":"is_a","term_name":"cellular process phenotype during vegetative growth","termid":"FYPO:0001331"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000298"}],"interesting_parent_ids":["FYPO:0000298","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"cellular response phenotype during vegetative growth","synonyms":[{"name":"cellular response phenotype during mitotic cell cycle","type":"related"},{"name":"fission yeast cellular response phenotype during vegetative growth","type":"exact"}],"termid":"FYPO:0001342"}


id: PBO:0088694
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L32","termid":"PBO:0088694"}


id: MONDO:0011315
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Osebold skeletal dysplasia/osteolysis syndrome","secondary_identifiers":["UMLS:C1863922","MESH:C566380","MEDGEN:350300","OMIM:603389"],"synonyms":[{"name":"Osebold skeletal dysplasia/osteolysis syndrome","type":"exact"}],"termid":"MONDO:0011315","xrefs":{"Monarch":{"xref_id":"0011315"}}}


id: PBO:0091749
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"II:g.1950050_1950051insG","termid":"PBO:0091749"}


id: PR:O13612
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- nep2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13612"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NEDD8-specific protease 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC32H8.02c","synonyms":[{"name":"Spom972h-nep2","type":"exact"},{"name":"meiotically up-regulated gene 120 protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13612"}


id: PBO:0049431
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GUSB pseudogene 8","termid":"PBO:0049431"}


id: PBO:0015680
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation initiation factor eIF4E, 4F complex E subunit isoform 2, stress response factor","termid":"PBO:0015680"}


id: GO:0098679
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A regulation of transcription from RNA polymerase II promoter that results in regulation of carbohydrate catabloism.","definition_xrefs":["PMID:16408318"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of carbohydrate catabolic process by regulation of transcription from RNA polymerase II promoter (obsolete GO:0098679)","synonyms":[{"name":"regulation of carbohydrate catabolism by regulation of transcription from RNA polymerase II promoter","type":"exact"}],"termid":"GO:0098679"}


id: PBO:0030710
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_chromatin_binding","termid":"PBO:0030710"}


id: PBO:0089950
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lsm2-8 complex subunit Lsm4","termid":"PBO:0089950"}


id: MONDO:0007757
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hyperkeratosis-hyperpigmentation syndrome describes a very rare hyperpigmentation of the skin characterized by tiny hyperpigmented spots mainly on skin exposed to sunlight, together with mild punctate palmoplantar papular hyperkeratosis as a major feature. There have been no further descriptions in the literature since 1993.","definition_xrefs":["Orphanet:1336"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"hyperpigmentation of the skin","termid":"MONDO:0019289"},{"relation_name":"is_a","term_name":"hereditary skin disorder","termid":"MONDO:0100118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0005093"],"is_obsolete":false,"name":"hyperkeratosis-hyperpigmentation syndrome","secondary_identifiers":["MEDGEN:326735","GARD:16563","MESH:C564172","OMIM:144190","UMLS:C1840428"],"synonyms":[{"name":"hyperkeratosis-hyperpigmentation syndrome","type":"exact"}],"termid":"MONDO:0007757","xrefs":{"Monarch":{"xref_id":"0007757"}}}


id: GO:1902761
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of chondrocyte development.","definition_xrefs":["GO_REF:0000058","GOC:mr","GOC:TermGenie","PMID:16575901"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell development","termid":"GO:0010720"},{"relation_name":"is_a","term_name":"positive regulation of chondrocyte differentiation","termid":"GO:0032332"},{"relation_name":"is_a","term_name":"regulation of chondrocyte development","termid":"GO:0061181"},{"relation_name":"positively_regulates","term_name":"chondrocyte development","termid":"GO:0002063"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of chondrocyte development","synonyms":[{"name":"activation of chondrocyte development","type":"narrow"},{"name":"up regulation of chondrocyte development","type":"exact"},{"name":"up-regulation of chondrocyte development","type":"exact"},{"name":"upregulation of chondrocyte development","type":"exact"}],"termid":"GO:1902761"}


id: MONDO:0043982
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Compression of the ULNAR NERVE in the cubital tunnel, which is formed by the two heads of the flexor carpi ulnaris muscle, humeral-ulnar aponeurosis, and medial ligaments of the elbow. This condition may follow trauma or occur in association with processes which produce nerve enlargement or narrowing of the canal. Manifestations include elbow pain and PARESTHESIA radiating distally, weakness of ulnar innervated intrinsic hand muscles, and loss of sensation over the hypothenar region, fifth finger, and ulnar aspect of the ring finger. (Joynt, Clinical Neurology, 1995, Ch51, p43)","definition_xrefs":["MESH:D020430"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ulnar neuropathy","termid":"MONDO:0007006"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"cubital tunnel syndrome","secondary_identifiers":["SCTID:56177003","MEDGEN:104813","UMLS:C0206239"],"synonyms":[{"name":"cubital tunnel syndrome","type":"exact"},{"name":"cubital tunnel syndromes","type":"related"},{"name":"syndrome, cubital tunnel","type":"related"},{"name":"syndromes, cubital tunnel","type":"related"},{"name":"tunnel syndrome, cubital","type":"related"},{"name":"tunnel syndromes, cubital","type":"related"},{"name":"ulnar nerve compression, cubital tunnel","type":"related"},{"name":"ulnar nerve entrapment, elbow","type":"related"}],"termid":"MONDO:0043982","xrefs":{"Monarch":{"xref_id":"0043982"}}}


id: PR:O14265
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A V-type proton ATPase subunit H that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR10698:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V-type proton ATPase subunit H (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC7D4.10","secondary_identifiers":["UniProtKB:O14265"],"synonyms":[{"name":"SPAC7D4.10","type":"related"},{"name":"Spom972h-ATP6V1H","type":"exact"},{"name":"V-ATPase 54 kDa subunit (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"V-ATPase subunit H (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"vacuolar proton pump subunit H (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14265"}


id: PBO:0040454
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase phospholipid transporting 11B (putative)","termid":"PBO:0040454"}


id: GO:0000950
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving the catabolism of branched chain amino acids to produce branched chain alcohols with one carbon less than the starting amino acid. In S. cerevisiae, this is known to occur for leucine, isoleucine, valine, methionine, phenylalanine, tyrosine, or tryptophan. When a branched chain family amino acid, leucine, isoleucine, or valine, is used as the substrate, 3-methylbutanol, 2-methylbutanol, or 2-methylpropanol, respectively, is produced. Often referred to as the Ehrlich pathway, these reactions generally occur during fermentation to produce a variety of alcohols, often collectively referred to as fusel alcohols. Depending on the redox state of the cells, carboxylic acid derivatives may be produced instead of alcohols.","definition_xrefs":["GOC:krc","PMID:18281432"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid catabolic process to alcohol via Ehrlich pathway","termid":"GO:0000947"},{"relation_name":"is_a","term_name":"branched-chain amino acid catabolic process","termid":"GO:0009083"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006520"],"is_obsolete":false,"name":"branched-chain amino acid catabolic process to alcohol via Ehrlich pathway","synonyms":[{"name":"branched chain family amino acid catabolic process to alcohol via Ehrlich pathway","type":"exact"}],"termid":"GO:0000950"}


id: GO:0051888
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of timing of exogen, the shedding phase of the hair cycle.","definition_xrefs":["GOC:pr","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of hair follicle maturation","termid":"GO:0048818"},{"relation_name":"is_a","term_name":"regulation of timing of exogen","termid":"GO:0051887"},{"relation_name":"positively_regulates","term_name":"exogen","termid":"GO:0042638"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of timing of exogen","synonyms":[{"name":"activation of exogen","type":"narrow"},{"name":"positive regulation of exogen","type":"related"},{"name":"stimulation of exogen","type":"narrow"},{"name":"up regulation of exogen","type":"related"},{"name":"up-regulation of exogen","type":"related"},{"name":"upregulation of exogen","type":"related"}],"termid":"GO:0051888"}


id: PBO:0041285
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C1QTNF9 antisense RNA 1","termid":"PBO:0041285"}


id: PBO:0043477
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin Pas1/PHO80 domain containing 1","termid":"PBO:0043477"}


id: GO:0030502
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of bone mineralization.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of ossification","termid":"GO:0030279"},{"relation_name":"is_a","term_name":"regulation of bone mineralization","termid":"GO:0030500"},{"relation_name":"is_a","term_name":"negative regulation of biomineral tissue development","termid":"GO:0070168"},{"relation_name":"negatively_regulates","term_name":"bone mineralization","termid":"GO:0030282"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of bone mineralization","synonyms":[{"name":"down regulation of bone mineralization","type":"exact"},{"name":"down-regulation of bone mineralization","type":"exact"},{"name":"downregulation of bone mineralization","type":"exact"},{"name":"inhibition of bone mineralization","type":"narrow"}],"termid":"GO:0030502"}


id: PBO:0025481
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fluoride channel Fex2","termid":"PBO:0025481"}


id: PBO:0043161
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell death inducing DFFA like effector a","termid":"PBO:0043161"}


id: GO:1904712
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of Wnt-Frizzled-LRP5/6 complex assembly.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","GOC:bf","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein-containing complex assembly","termid":"GO:0031334"},{"relation_name":"is_a","term_name":"regulation of Wnt-Frizzled-LRP5/6 complex assembly","termid":"GO:1904711"},{"relation_name":"positively_regulates","term_name":"Wnt-Frizzled-LRP5/6 complex assembly","termid":"GO:1904701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0065003"],"is_obsolete":false,"name":"positive regulation of Wnt-Frizzled-LRP5/6 complex assembly","synonyms":[{"name":"activation of Frizzled-LRP5/6 complex assembly","type":"narrow"},{"name":"activation of Frizzled-LRP5/6 complex formation","type":"related"},{"name":"activation of WNT-FZD-LRP5 complex assembly","type":"narrow"},{"name":"activation of WNT-FZD-LRP5 complex formation","type":"narrow"},{"name":"activation of WNT-FZD-LRP6 complex assembly","type":"narrow"},{"name":"activation of WNT-FZD-LRP6 complex formation","type":"narrow"},{"name":"activation of Wnt-FZD-LRP5/6 trimeric complex assembly","type":"narrow"},{"name":"activation of Wnt-FZD-LRP5/6 trimeric complex formation","type":"narrow"},{"name":"activation of Wnt-induced Frizzled-LRP5/6 complex assembly","type":"related"},{"name":"activation of Wnt-induced Frizzled-LRP5/6 complex formation","type":"related"},{"name":"positive regulation of Frizzled-LRP5/6 complex assembly","type":"related"},{"name":"positive regulation of Frizzled-LRP5/6 complex formation","type":"related"},{"name":"positive regulation of WNT-FZD-LRP5 complex assembly","type":"narrow"},{"name":"positive regulation of WNT-FZD-LRP5 complex formation","type":"narrow"},{"name":"positive regulation of WNT-FZD-LRP6 complex assembly","type":"narrow"},{"name":"positive regulation of WNT-FZD-LRP6 complex formation","type":"narrow"},{"name":"positive regulation of Wnt-FZD-LRP5/6 trimeric complex assembly","type":"exact"},{"name":"positive regulation of Wnt-FZD-LRP5/6 trimeric complex formation","type":"exact"},{"name":"positive regulation of Wnt-induced Frizzled-LRP5/6 complex assembly","type":"related"},{"name":"positive regulation of Wnt-induced Frizzled-LRP5/6 complex formation","type":"related"},{"name":"up regulation of Frizzled-LRP5/6 complex assembly","type":"exact"},{"name":"up regulation of Frizzled-LRP5/6 complex formation","type":"related"},{"name":"up regulation of WNT-FZD-LRP5 complex assembly","type":"narrow"},{"name":"up regulation of WNT-FZD-LRP5 complex formation","type":"narrow"},{"name":"up regulation of WNT-FZD-LRP6 complex assembly","type":"narrow"},{"name":"up regulation of WNT-FZD-LRP6 complex formation","type":"narrow"},{"name":"up regulation of Wnt-FZD-LRP5/6 trimeric complex assembly","type":"exact"},{"name":"up regulation of Wnt-FZD-LRP5/6 trimeric complex formation","type":"exact"},{"name":"up regulation of Wnt-induced Frizzled-LRP5/6 complex assembly","type":"related"},{"name":"up regulation of Wnt-induced Frizzled-LRP5/6 complex formation","type":"related"},{"name":"up-regulation of Frizzled-LRP5/6 complex assembly","type":"exact"},{"name":"up-regulation of Frizzled-LRP5/6 complex formation","type":"related"},{"name":"up-regulation of WNT-FZD-LRP5 complex assembly","type":"narrow"},{"name":"up-regulation of WNT-FZD-LRP5 complex formation","type":"narrow"},{"name":"up-regulation of WNT-FZD-LRP6 complex assembly","type":"narrow"},{"name":"up-regulation of WNT-FZD-LRP6 complex formation","type":"narrow"},{"name":"up-regulation of Wnt-FZD-LRP5/6 trimeric complex assembly","type":"exact"},{"name":"up-regulation of Wnt-FZD-LRP5/6 trimeric complex formation","type":"exact"},{"name":"up-regulation of Wnt-induced Frizzled-LRP5/6 complex assembly","type":"related"},{"name":"up-regulation of Wnt-induced Frizzled-LRP5/6 complex formation","type":"related"},{"name":"upregulation of Frizzled-LRP5/6 complex assembly","type":"exact"},{"name":"upregulation of Frizzled-LRP5/6 complex formation","type":"related"},{"name":"upregulation of WNT-FZD-LRP5 complex assembly","type":"narrow"},{"name":"upregulation of WNT-FZD-LRP5 complex formation","type":"narrow"},{"name":"upregulation of WNT-FZD-LRP6 complex assembly","type":"narrow"},{"name":"upregulation of WNT-FZD-LRP6 complex formation","type":"narrow"},{"name":"upregulation of Wnt-FZD-LRP5/6 trimeric complex assembly","type":"exact"},{"name":"upregulation of Wnt-FZD-LRP5/6 trimeric complex formation","type":"exact"},{"name":"upregulation of Wnt-induced Frizzled-LRP5/6 complex assembly","type":"related"},{"name":"upregulation of Wnt-induced Frizzled-LRP5/6 complex formation","type":"related"}],"termid":"GO:1904712"}


id: PBO:0084178
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Histone acetyltransferase catalytic subunit of NuA3 complex; acetylates histone H3, involved in transcriptional silencing; homolog of the mammalian MOZ proto-oncogene; mutant has aneuploidy tolerance; sas3gcn5 double mutation is lethal","termid":"PBO:0084178"}


id: MONDO:0044634
data:
  {"annotated_genes":["SJAG_01521"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85608],"is_not":false,"summary":null,"term":"MONDO:0044634"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-variable intellectual disability syndrome","termid":"MONDO:0015160"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01521":null},"genotype_count":0,"is_obsolete":false,"name":"retinitis pigmentosa-hearing loss-premature aging-short stature-facial dysmorphism syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C4540367","MEDGEN:1615526","OMIM:617763","DOID:0081175","GARD:17903","Orphanet:494439"],"synonyms":[{"name":"retinitis pigmentosa-deafness-premature aging-short stature-facial dysmorphism syndrome","type":"exact"},{"name":"short stature, hearing loss, retinitis pigmentosa, and distinctive facies","type":"exact"}],"termid":"MONDO:0044634","terms_by_termid":{"MONDO:0044634":null},"xrefs":{"Monarch":{"xref_id":"0044634"}}}


id: GO:0048853
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the forebrain are generated and organized. The forebrain is the anterior of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions).","definition_xrefs":["GOC:cvs","GOC:jid","GOC:dgh","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"},{"relation_name":"part_of","term_name":"forebrain development","termid":"GO:0030900"},{"relation_name":"part_of","term_name":"brain morphogenesis","termid":"GO:0048854"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"forebrain morphogenesis","synonyms":[{"name":"prosencephalon morphogenesis","type":"exact"}],"termid":"GO:0048853"}


id: GO:1901583
data:
  {"annotated_genes":["SJAG_00922"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[108361],"is_not":false,"summary":null,"term":"GO:1901583"}]},"cv_name":"biological_process","definition":"The directed movement of a tetrapeptide from outside of a cell, across the plasma membrane and into the cytosol.","definition_xrefs":["PMID:22226946","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligopeptide import across plasma membrane","termid":"GO:0140205"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00922":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0006810","GO:0055085","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"tetrapeptide import across plasma membrane","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"tetrapeptide membrane transport","type":"exact"},{"name":"tetrapeptide transmembrane transport","type":"broad"}],"termid":"GO:1901583","terms_by_termid":{"GO:1901583":null}}


id: MONDO:0000896
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete chronic neutrophilic leukemia (obsolete MONDO:0000896)","termid":"MONDO:0000896","xrefs":{"Monarch":{"xref_id":"0000896"}}}


id: PBO:0109042
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"membrane palmitoyltransferase Pfa5","termid":"PBO:0109042"}


id: GO:0038110
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by interleukin-2 binding to its receptor on the surface of a cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:signaling","GOC:nhn"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine-mediated signaling pathway","termid":"GO:0019221"},{"relation_name":"part_of","term_name":"cellular response to interleukin-2","termid":"GO:0071352"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"interleukin-2-mediated signaling pathway","secondary_identifiers":["Reactome:R-HSA-9020558"],"synonyms":[{"name":"IL-2-mediated signaling pathway","type":"exact"},{"name":"interleukin-2-mediated signalling pathway","type":"exact"}],"termid":"GO:0038110"}


id: PBO:0064762
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase E like pseudogene","termid":"PBO:0064762"}


id: GO:0017012
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The linkage of the chromophore phytochromobilin to phycocyanin or allophycocyanin.","definition_xrefs":["RESID:AA0133"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-bilin linkage","termid":"GO:0017007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein-phytochromobilin linkage","termid":"GO:0017012"}


id: PBO:0050222
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosomal binding domain 2","termid":"PBO:0050222"}


id: MONDO:0006715
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Narrowing of the coronary artery lumen diameter.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"coronary artery disorder","termid":"MONDO:0005010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"coronary stenosis","secondary_identifiers":["NANDO:2200246","DOID:4248","MedDRA:10011089","SCTID:233970002","MEDGEN:66859","UMLS:C0242231","MESH:D023921"],"synonyms":[{"name":"coronary artery stenosis","type":"exact"}],"termid":"MONDO:0006715","xrefs":{"Monarch":{"xref_id":"0006715"}}}


id: GO:0018962
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving 3-phenylpropionate, the anion of phenylpropanoic acid. It is produced from putrefaction of proteins in soil or breakdown of several constituents of plants, such as lignin, various oils and resins.","definition_xrefs":["GOC:ai","UM-BBD_pathwayID:ppa"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid metabolic process","termid":"GO:0032787"},{"relation_name":"is_a","term_name":"benzene-containing compound metabolic process","termid":"GO:0042537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"3-phenylpropionate metabolic process","synonyms":[{"name":"3-phenylpropionate metabolism","type":"exact"},{"name":"hydrocinnamic acid metabolic process","type":"exact"},{"name":"hydrocinnamic acid metabolism","type":"exact"},{"name":"phenylpropanoate metabolic process","type":"exact"},{"name":"phenylpropanoate metabolism","type":"exact"}],"termid":"GO:0018962"}


id: GO:0070540
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to stearic acid, the 18-carbon saturated fatty acid octadecanoic acid.","definition_xrefs":["GOC:mah","GOC:lp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"long-chain fatty acid binding","termid":"GO:0036041"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0008289"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0008289","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"stearic acid binding","termid":"GO:0070540"}


id: PR:Q9HDW6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- vma5 gene.","definition_xrefs":["UniProtKB:Q9HDW6","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V-type proton ATPase subunit C (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPB2B4.05","synonyms":[{"name":"Spom972h-vma5","type":"exact"},{"name":"V-ATPase subunit C (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"vacuolar proton pump subunit C (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9HDW6"}


id: PBO:0075121
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 170","termid":"PBO:0075121"}


id: PBO:0079497
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thioredoxin interacting protein","termid":"PBO:0079497"}


id: MONDO:0044727
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare carcinoma with a poor prognosis, characterized by the presence of a mixture of exocrine and neuroendocrine malignant epithelial cells in both the pancreas and metastatic sites. Symptoms include jaundice, abdominal pain, and weight loss.","definition_xrefs":["NCIT:C45843"],"direct_ancestors":[{"relation_name":"is_a","term_name":"exocrine pancreatic carcinoma","termid":"MONDO:0005192"},{"relation_name":"is_a","term_name":"digestive system mixed adenoneuroendocrine carcinoma","termid":"MONDO:0006182"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"pancreatic carcinoma with mixed differentiation","secondary_identifiers":["Orphanet:506112","MEDGEN:353935","GARD:22057","UMLS:C1709050"],"synonyms":[{"name":"MiNEN of pancreas","type":"exact"},{"name":"mixed exocrine-endocrine carcinoma of the pancreas","type":"exact"},{"name":"mixed neuroendocrine-nonneuroendocrine neoplasm of pancreas","type":"related"},{"name":"pancreatic MiNEN","type":"exact"},{"name":"pancreatic carcinoma with mixed differentiation","type":"exact"},{"name":"pancreatic mixed neuroendocrine-nonneuroendocrine neoplasm","type":"exact"}],"termid":"MONDO:0044727","xrefs":{"Monarch":{"xref_id":"0044727"}}}


id: PBO:0091613
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription factor, zf-fungal binuclear cluster type Klf1","termid":"PBO:0091613"}


id: PBO:0000307
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase activating protein Gyp7 (predicted)","termid":"PBO:0000307"}


id: GO:0050380
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: di-trans,octa-cis-undecaprenyl diphosphate + H2O = di-trans,octa-cis-undecaprenyl phosphate + H+ + phosphate.","definition_xrefs":["RHEA:28094","PMID:18411271"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrophosphatase activity","termid":"GO:0016462"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"undecaprenyl-diphosphatase activity","secondary_identifiers":["MetaCyc:UNDECAPRENYL-DIPHOSPHATASE-RXN","EC:3.6.1.27","KEGG_REACTION:R05627"],"synonyms":[{"name":"C(55)-isoprenyl diphosphatase activity","type":"related"},{"name":"C(55)-isoprenyl pyrophosphatase activity","type":"related"},{"name":"C55-isoprenyl diphosphatase activity","type":"related"},{"name":"C55-isoprenyl pyrophosphatase activity","type":"related"},{"name":"isoprenyl pyrophosphatase activity","type":"related"},{"name":"undecaprenyl-diphosphate phosphohydrolase activity","type":"related"}],"termid":"GO:0050380"}


id: MONDO:0044965
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A disease or disorder that involves the abdominal segment of trunk.","definition_xrefs":["MONDO:design_pattern"],"gene_count":0,"genotype_count":0,"name":"obsolete abdominal and pelvic region disorder (obsolete MONDO:0044965)","secondary_identifiers":["SCTID:609618002"],"synonyms":[{"name":"abdominal segment of trunk disease","type":"exact"},{"name":"abdominal segment of trunk disease or disorder","type":"exact"},{"name":"disease of abdominal segment of trunk","type":"exact"},{"name":"disease or disorder of abdominal segment of trunk","type":"exact"},{"name":"disorder of abdominal segment of trunk","type":"exact"}],"termid":"MONDO:0044965","xrefs":{"Monarch":{"xref_id":"0044965"}}}


id: PBO:0034024
data:
  {"annotation_feature_type":"gene","cv_name":"pubprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"canto_approver_name","termid":"PBO:0034024"}


id: PBO:0050149
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 3 pseudogene 5","termid":"PBO:0050149"}


id: PBO:0015245
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BAG family molecular chaperone regulator Bag102","termid":"PBO:0015245"}


id: MONDO:0015013
data:
  {"annotated_genes":["SJAG_03795"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87199],"is_not":false,"summary":null,"term":"MONDO:0015013"}]},"cv_name":"mondo","definition":"Any retinitis pigmentosa in which the cause of the disease is a mutation in the REEP6 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinitis pigmentosa","termid":"MONDO:0019200"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03795":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0004736","MONDO:0005066"],"is_obsolete":false,"name":"retinitis pigmentosa 77","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C4310626","DOID:0080350","GARD:16221","MEDGEN:934593","OMIM:617304"],"synonyms":[{"name":"REEP6 retinitis pigmentosa","type":"exact"},{"name":"RP77","type":"related"},{"name":"retinitis pigmentosa 77","type":"exact"},{"name":"retinitis pigmentosa caused by mutation in REEP6","type":"exact"},{"name":"retinitis pigmentosa type 77","type":"exact"}],"termid":"MONDO:0015013","terms_by_termid":{"MONDO:0015013":null},"xrefs":{"Monarch":{"xref_id":"0015013"}}}


id: MONDO:0010448
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Moyamoya angiopathy - short stature - facial dysmorphism - hypergonadotropic hypogonadism is a very rare, hereditary, neurological, dysmorphic syndrome characterized by moyamoya disease, short stature of postnatal onset, and stereotyped facial dysmorphism.","definition_xrefs":["Orphanet:280679"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-variable intellectual disability syndrome","termid":"MONDO:0015160"},{"relation_name":"is_a","term_name":"Moyamoya disease","termid":"MONDO:0016820"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"moyamoya angiopathy-short stature-facial dysmorphism-hypergonadotropic hypogonadism syndrome","secondary_identifiers":["UMLS:C3151857","MEDGEN:463207","OMIM:300845","icd11.foundation:673174743","GARD:17301"],"synonyms":[{"name":"MYMY4","type":"related"},{"name":"Moyamoya disease 4 with short stature, hypergonadotropic hypogonadism, and facial dysmorphism","type":"related"},{"name":"Moyamoya disease-short stature-facial dysmorphism-hypergonadotropic hypogonadism","type":"exact"},{"name":"chromosome Xq28 deletion syndrome, 3.4-Kb","type":"related"},{"name":"moyamoya disease 4, X-linked recessive","type":"exact"},{"name":"syndromic Moyamoya disease","type":"related"}],"termid":"MONDO:0010448","xrefs":{"Monarch":{"xref_id":"0010448"}}}


id: PBO:0014294
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Suppressor of Choline Sensitivity homolog","termid":"PBO:0014294"}


id: GO:1902342
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of xylitol out of a cell or organelle.","definition_xrefs":["GOC:TermGenie","PMID:23475614"],"gene_count":0,"genotype_count":0,"name":"obsolete xylitol export (obsolete GO:1902342)","termid":"GO:1902342"}


id: PBO:0088302
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CENP-A histone disassembly chaperone Ccp1","termid":"PBO:0088302"}


id: PBO:0074905
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 77","termid":"PBO:0074905"}


id: RO:0002379
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"x spatially_coextensive_with y if and inly if x and y have the same location","direct_ancestors":[{"relation_name":"is_a","term_name":"overlaps","termid":"RO:0002131"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spatially_coextensive_with","termid":"RO:0002379"}


id: GO:0031828
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type 2C serotonin receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled serotonin receptor binding","termid":"GO:0031821"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"type 2C serotonin receptor binding","synonyms":[{"name":"5-hydroxytryptamine 2C receptor binding","type":"exact"},{"name":"type 2C serotonin receptor ligand","type":"narrow"}],"termid":"GO:0031828"}


id: PBO:0040759
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BEAN1 antisense RNA 1","termid":"PBO:0040759"}


id: GO:0035517
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A multimeric protein complex that removes monoubiquitin from histone H2A. In Drosophila and mammals, the core of the complex is composed of Calypso/BAP1 and Asx/ASXL1, respectively.","definition_xrefs":["PMID:20436459"],"direct_ancestors":[{"relation_name":"is_a","term_name":"PcG protein complex","termid":"GO:0031519"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005634","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"PR-DUB complex","synonyms":[{"name":"Polycomb repressive deubiquitinase complex","type":"exact"}],"termid":"GO:0035517"}


id: PBO:0018030
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"magnesium ion transmembrane transporter Mrs2 (predicted)","termid":"PBO:0018030"}


id: GO:0044148
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of the increase in size or mass of an organism occurring in, on or near the exterior of its host organism.","definition_xrefs":["GOC:jl","GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of growth of symbiont involved in interaction with host (obsolete GO:0044148)","synonyms":[{"name":"positive regulation of growth of symbiont during interaction with host","type":"related"}],"termid":"GO:0044148"}


id: PBO:0056446
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MARK2 pseudogene 19","termid":"PBO:0056446"}


id: PBO:0031350
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cell_population_growth_at_low_temperature","termid":"PBO:0031350"}


id: GO:0043129
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in the maintenance of a steady-state level of a surface-active agent that maintains the surface tension of a liquid.","definition_xrefs":["PMID:23708874","PMID:9751757"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal-level chemical homeostasis","termid":"GO:0140962"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"surfactant homeostasis","secondary_identifiers":["GO:0050828"],"synonyms":[{"name":"regulation of liquid surface tension","type":"related"},{"name":"regulation of surface tension of a liquid","type":"related"},{"name":"surfactant activity","type":"related"}],"termid":"GO:0043129"}


id: PBO:0082178
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP-ribosylation factor GTPase activating protein (ARF GAP); involved in ER-Golgi transport; required for prospore membrane formation; regulates phospholipase Spo14p; shares functional similarity with Glo3p; GCS1 has a paralog, SPS18, that arose from the whole genome duplication","termid":"PBO:0082178"}


id: PBO:0075686
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SRC proto-oncogene, non-receptor tyrosine kinase","termid":"PBO:0075686"}


id: MONDO:0019000
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Perineural (or Tarlov) cysts are cerebrospinal fluid-filled nerve root cysts most commonly found at the sacral level of the spine, although they can be found in any section of the spine, which can cause progressively painful radiculopathy.","definition_xrefs":["Orphanet:65250"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder","termid":"MONDO:0005071"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"perineural cyst","secondary_identifiers":["SCTID:81634008","GARD:9258","UMLS:C0520720","icd11.foundation:881909739","MEDGEN:105457","MESH:D052958"],"synonyms":[{"name":"Tarlov cyst","type":"exact"},{"name":"Tarlov cysts","type":"related"},{"name":"perineural cysts","type":"related"},{"name":"sacral Tarlov cysts","type":"related"},{"name":"sacral neural cysts","type":"related"},{"name":"sacral perineural cysts","type":"related"}],"termid":"MONDO:0019000","xrefs":{"Monarch":{"xref_id":"0019000"}}}


id: GO:0061322
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires the specialized structural and/or functional features of a disseminated nephrocyte. A disseminated nephrocyte is an insect renal cell that filters hemolymph and is found at scattered locations in the fat body or other tissues. Differentiation includes the processes involved in commitment of a cell to a specific fate and its subsequent development to the mature state.","definition_xrefs":["GOC:19783135","GOC:dph","CL:0002524","GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nephrocyte differentiation","termid":"GO:0061319"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"disseminated nephrocyte differentiation","termid":"GO:0061322"}


id: GO:0052599
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: N-methylputrescine + H2O + O2 = N-methylaminobutanal + NH3 + hydrogen peroxide + H+.","definition_xrefs":["PMID:17283012","PMID:24287136"],"gene_count":0,"genotype_count":0,"name":"obsolete methylputrescine oxidase activity (obsolete GO:0052599)","termid":"GO:0052599"}


id: GO:0009120
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving any one of a family of organic molecules consisting of a purine or pyrimidine base covalently bonded to a sugar deoxyribose (a deoxyribonucleoside).","definition_xrefs":["ISBN:0140512713","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside metabolic process","termid":"GO:0009116"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"deoxyribonucleoside metabolic process","synonyms":[{"name":"deoxyribonucleoside metabolism","type":"exact"}],"termid":"GO:0009120"}


id: PBO:0050540
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypoxanthine phosphoribosyltransferase 1 pseudogene 1","termid":"PBO:0050540"}


id: MONDO:0002876
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare malignant mixed epithelial and mesenchymal neoplasm that arises from the cervix and is characterized by the presence of malignant mesenchymal elements and benign epithelial elements.","definition_xrefs":["NCIT:C40229"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"cervical carcinosarcoma","termid":"MONDO:0002877"},{"relation_name":"is_a","term_name":"adenosarcoma","termid":"MONDO:0005636"},{"relation_name":"is_a","term_name":"malignant mixed epithelial and mesenchymal tumor of cervix uteri","termid":"MONDO:0016277"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"cervical adenosarcoma","secondary_identifiers":["DOID:4111","SCTID:764847000","UMLS:C1516426","GARD:20492","MEDGEN:308948","Orphanet:213792","ICD10CM:C53.0"],"synonyms":[{"name":"adenosarcoma of the cervix uteri","type":"exact"},{"name":"adenosarcoma of uterine cervix","type":"exact"},{"name":"cervical Muellerian adenosarcoma","type":"exact"},{"name":"cervical Mullerian adenosarcoma","type":"exact"},{"name":"cervical Müllerian adenosarcoma","type":"exact"},{"name":"cervical adenosarcoma","type":"exact"},{"name":"uterine cervix adenosarcoma","type":"exact"}],"termid":"MONDO:0002876","xrefs":{"Monarch":{"xref_id":"0002876"}}}


id: MONDO:0009212
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenital factor X deficiency is an inherited bleeding disorder with a decreased antigen and/or activity of factor X (FX) and characterized by mild to severe bleeding symptoms.","definition_xrefs":["Orphanet:328"],"direct_ancestors":[{"relation_name":"is_a","term_name":"factor X deficiency","termid":"MONDO:0002247"},{"relation_name":"is_a","term_name":"congenital vitamin K-dependent coagulation factors deficiency","termid":"MONDO:0015722"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"congenital factor X deficiency","secondary_identifiers":["DOID:2222","NCIT:C98940","SCTID:37350004","icd11.foundation:1886781445","GARD:6404","OMIM:227600","ICD9:286.3","UMLS:C0272327","MEDGEN:543976"],"synonyms":[{"name":"F10 deficiency","type":"related"},{"name":"Stuart factor deficiency, congenital","type":"related"},{"name":"Stuart-Prower Factor deficiency","type":"related"},{"name":"Stuart-Prower factor deficiency","type":"exact"},{"name":"congenital Stuart factor deficiency","type":"exact"},{"name":"congenital factor X deficiency","type":"exact"},{"name":"disease, Stuart-Prower","type":"exact"},{"name":"factor 10 deficiency","type":"related"},{"name":"factor X deficiency","type":"related"},{"name":"factor X deficiency, congenital","type":"related"},{"name":"hereditary Factor X deficiency","type":"exact"}],"termid":"MONDO:0009212","xrefs":{"Monarch":{"xref_id":"0009212"}}}


id: PBO:0050641
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock transcription factor Y-linked 6, pseudogene","termid":"PBO:0050641"}


id: PBO:0013836
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"choline transmembrane transporter family protein Ctl1","termid":"PBO:0013836"}


id: GO:0015200
data:
  {"annotated_genes":["SJAG_04731"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[99614],"is_not":false,"summary":null,"term":"GO:0015200"}]},"cv_name":"molecular_function","definition":"Enables directed movement of methylammonium, CH3NH2, from one side of a membrane to the other.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amine transmembrane transporter activity","termid":"GO:0005275"},{"relation_name":"is_a","term_name":"organic cation transmembrane transporter activity","termid":"GO:0015101"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04731":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"methylammonium transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0015200","terms_by_termid":{"GO:0015200":null}}


id: PBO:0066687
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"relaxin 2","termid":"PBO:0066687"}


id: MONDO:0002215
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete atypical teratoid rhabdoid tumor (obsolete MONDO:0002215)","termid":"MONDO:0002215","xrefs":{"Monarch":{"xref_id":"0002215"}}}


id: GO:0045191
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of isotype switching.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of DNA recombination","termid":"GO:0000018"},{"relation_name":"is_a","term_name":"regulation of immunoglobulin production","termid":"GO:0002637"},{"relation_name":"is_a","term_name":"regulation of immunoglobulin mediated immune response","termid":"GO:0002889"},{"relation_name":"is_a","term_name":"regulation of B cell activation","termid":"GO:0050864"},{"relation_name":"regulates","term_name":"isotype switching","termid":"GO:0045190"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0006310"}],"interesting_parent_ids":["GO:0008150","GO:0006310","GO:0006259","GO:0010467"],"is_obsolete":false,"name":"regulation of isotype switching","synonyms":[{"name":"regulation of class switch recombination","type":"exact"},{"name":"regulation of class switching","type":"exact"},{"name":"regulation of isotype switch recombination","type":"exact"}],"termid":"GO:0045191"}


id: PBO:0039733
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"apolipoprotein C4","termid":"PBO:0039733"}


id: GO:0071702
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of organic substances into, out of or within a cell, or between cells, or within a multicellular organism by means of some agent such as a transporter or pore. An organic substance is a molecular entity that contains carbon.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete organic substance transport (obsolete GO:0071702)","termid":"GO:0071702"}


id: GO:1903176
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of tyrosine 3-monooxygenase activity.","definition_xrefs":["GO_REF:0000059","GOC:PARL","GOC:TermGenie","GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of tyrosine 3-monooxygenase activity (obsolete GO:1903176)","synonyms":[{"name":"regulation of L-tyrosine hydroxylase activity","type":"exact"},{"name":"regulation of L-tyrosine,tetrahydrobiopterin:oxygen oxidoreductase (3-hydroxylating)","type":"exact"},{"name":"regulation of tyrosine 3-hydroxylase activity","type":"exact"},{"name":"regulation of tyrosine hydroxylase activity","type":"exact"}],"termid":"GO:1903176"}


id: PBO:0030311
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-loss_of_viability_at_high_temperature","termid":"PBO:0030311"}


id: MONDO:0012117
data:
  {"annotated_genes":["SJAG_00334"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86806],"is_not":false,"summary":null,"term":"MONDO:0012117"},{"annotations":[87615],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009890"}]},"cv_name":"mondo","definition":"A form of congenital disorders of N-linked glycosylation characterized by progressive microcephaly, hypotonia, developmental delay, drug-resistant infantile epilepsy, and hepatomegaly. Additional features that may be observed include failure to thrive, pericardial effusion, renal cysts, skeletal dysplasia, facial dysmorphism (frontal bossing, hypertelorism, depressed nasal bridge, low-seated ears, large mouth) and hydrops fetalis. The disease is caused by loss-of-function mutations in the gene ALG9 (11q23).","definition_xrefs":["Orphanet:79328"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital disorder of glycosylation type I","termid":"MONDO:0005500"},{"relation_name":"is_a","term_name":"disorder of protein N-glycosylation","termid":"MONDO:0017740"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00334":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0024322"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0024322"],"is_obsolete":false,"name":"ALG9-congenital disorder of glycosylation","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:9839","UMLS:C2931006","DOID:0080564","SCTID:720978005","MESH:C535750","OMIM:608776","MEDGEN:443955"],"synonyms":[{"name":"ALG9-CDG","type":"exact"},{"name":"ALG9-CDG (CDG-IL)","type":"related"},{"name":"ALG9-congenital disorder of glycosylation","type":"exact"},{"name":"CDG 1L","type":"related"},{"name":"CDG IL","type":"related"},{"name":"CDG syndrome type IL","type":"exact"},{"name":"CDG-IL","type":"exact"},{"name":"CDG1L","type":"exact"},{"name":"carbohydrate deficient glycoprotein syndrome type 1L","type":"exact"},{"name":"carbohydrate deficient glycoprotein syndrome type IL","type":"related"},{"name":"congenital disorder of glycosylation type 1L","type":"exact"},{"name":"congenital disorder of glycosylation type IL","type":"related"},{"name":"congenital disorder of glycosylation, type IL","type":"related"},{"name":"mannosyltransferase 7-9 deficiency","type":"exact"}],"termid":"MONDO:0012117","terms_by_termid":{"MONDO:0009890":null,"MONDO:0012117":null},"xrefs":{"Monarch":{"xref_id":"0012117"}}}


id: GO:0071221
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a bacterial lipopeptide stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to bacterial lipopeptide","termid":"GO:0070339"},{"relation_name":"is_a","term_name":"cellular response to bacterial lipoprotein","termid":"GO:0071220"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to bacterial lipopeptide","termid":"GO:0071221"}


id: GO:0005728
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Circular DNA molecules encoding ribosomal RNA that are replicated independently of chromosomal replication. These molecules originate in the chromosome but are excised and circularized, often by intramolecular homologous recombination between direct tandem repeats.","definition_xrefs":["GOC:mah","PMID:12044934"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extrachromosomal circular DNA","termid":"GO:0005727"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"extrachromosomal rDNA circle","synonyms":[{"name":"extrachromosomal ribosomal DNA circle","type":"exact"}],"termid":"GO:0005728"}


id: MONDO:0001787
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hepatic vascular disorder","termid":"MONDO:0002405"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0002515","MONDO:0004335"],"is_obsolete":false,"name":"hepatic infarction","secondary_identifiers":["MESH:D000081011","DOID:13738","ICD9:573.4","MEDGEN:508812","SCTID:17890003","UMLS:C0151731"],"synonyms":[{"name":"infarct of liver","type":"exact"}],"termid":"MONDO:0001787","xrefs":{"Monarch":{"xref_id":"0001787"}}}


id: PBO:0053591
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 618","termid":"PBO:0053591"}


id: PBO:0116647
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARF like GTPase 2 binding protein pseudogene 2","termid":"PBO:0116647"}


id: MONDO:0014357
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal dominant non-syndromic intellectual disability in which the cause of the disease is a mutation in the DEAF1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intellectual disability, autosomal dominant","termid":"MONDO:0100172"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"intellectual disability, autosomal dominant 24","secondary_identifiers":["DOID:0070054","GARD:16467","OMIM:615828","MEDGEN:862851","UMLS:C4014414"],"synonyms":[{"name":"DEAF1 autosomal dominant non-syndromic intellectual disability","type":"exact"},{"name":"MRD24","type":"exact"},{"name":"Vulto-van Silfout-de Vries syndrome","type":"exact"},{"name":"autosomal dominant intellectual disability 24","type":"exact"},{"name":"autosomal dominant mental retardation 24","type":"exact"},{"name":"autosomal dominant non-syndromic intellectual disability 24","type":"related"},{"name":"autosomal dominant non-syndromic intellectual disability caused by mutation in DEAF1","type":"exact"},{"name":"intellectual disability, autosomal dominant 24","type":"exact"},{"name":"intellectual disability, autosomal dominant type 24","type":"exact"},{"name":"mental retardation, autosomal dominant 24","type":"related"},{"name":"mental retardation, autosomal dominant type 24","type":"exact"}],"termid":"MONDO:0014357","xrefs":{"Monarch":{"xref_id":"0014357"}}}


id: GO:0034468
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The volume enclosed by the membrane of a glycosome.","definition_xrefs":["GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peroxisomal matrix","termid":"GO:0005782"},{"relation_name":"part_of","term_name":"glycosome","termid":"GO:0020015"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005777"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005777","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"glycosome lumen","termid":"GO:0034468"}


id: PBO:0049725
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HAUS augmin like complex subunit 6 pseudogene 3","termid":"PBO:0049725"}


id: MONDO:0017063
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spina bifida aperta","termid":"MONDO:0017062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"total spina bifida aperta","secondary_identifiers":["Orphanet:268377","GARD:20952","icd11.foundation:910194123"],"termid":"MONDO:0017063","xrefs":{"Monarch":{"xref_id":"0017063"}}}


id: FYPO:0003544
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the number of sites of double-strand breaks in DNA is greater than normal during a meiotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased number of double-strand break sites","termid":"FYPO:0003543"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002"],"is_obsolete":false,"name":"increased number of double-strand break sites during meiotic cell cycle","synonyms":[{"name":"accumulation of DNA damage foci during meiotic cell cycle","type":"related"},{"name":"accumulation of double-strand break sites during meiotic cell cycle","type":"exact"},{"name":"increased number of DNA damage foci during meiotic cell cycle","type":"related"},{"name":"increased number of double-strand break sites during meiosis","type":"related"},{"name":"increased number of meiotic double-strand break sites","type":"exact"},{"name":"increased number of meiotic double-strand breaks","type":"exact"}],"termid":"FYPO:0003544"}


id: PBO:0073300
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septin 14 pseudogene 22","termid":"PBO:0073300"}


id: GO:1905854
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of heparan sulfate binding.","definition_xrefs":["GOC:aruk","PMID:7683668","GOC:bc","GOC:TermGenie","GO_REF:0000059"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of heparan sulfate binding (obsolete GO:1905854)","synonyms":[{"name":"down regulation of heparan sulfate binding","type":"exact"},{"name":"down-regulation of heparan sulfate binding","type":"exact"},{"name":"downregulation of heparan sulfate binding","type":"exact"},{"name":"inhibition of heparan sulfate binding","type":"narrow"}],"termid":"GO:1905854"}


id: MONDO:0004472
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An invasive breast adenocarcinoma characterized by the presence of tall columnar neoplastic cells that contain intracytoplasmic mucin. Grossly, cystic changes are not identified.","definition_xrefs":["NCIT:C40355"],"direct_ancestors":[{"relation_name":"is_a","term_name":"breast mucinous carcinoma","termid":"MONDO:0002707"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"breast columnar cell mucinous carcinoma","secondary_identifiers":["UMLS:C1511305","DOID:8130","MEDGEN:307307"],"synonyms":[{"name":"breast columnar cell mucinous carcinoma","type":"exact"}],"termid":"MONDO:0004472","xrefs":{"Monarch":{"xref_id":"0004472"}}}


id: PBO:0074962
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 114-4","termid":"PBO:0074962"}


id: PBO:0088620
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleotide pyrophosphatase Npp1","termid":"PBO:0088620"}


id: MONDO:0004907
data:
  {"annotated_genes":["SJAG_02536","SJAG_00155","SJAG_01202","SJAG_03126","SJAG_03469"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85662],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014027"},{"annotations":[86809,86808],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014384"},{"annotations":[85883,85882],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054588"}]},"cv_name":"mondo","definition":"Hair loss usually from the scalp. It may result in bald spots or spread to the entire scalp or the entire epidermis. It may be androgenetic or caused by chemotherapeutic agents, compulsive hair pulling, autoimmune disorders or congenital conditions.","definition_xrefs":["NCIT:C50575"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"hypotrichosis","termid":"MONDO:0003037"},{"relation_name":"is_a","term_name":"hair anomaly","termid":"MONDO:0019278"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00155":null,"SJAG_01202":null,"SJAG_02536":null,"SJAG_03126":null,"SJAG_03469":null},"genotype_count":0,"is_obsolete":false,"name":"alopecia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:987","SCTID:56317004","UMLS:C0002170","ICD9:704.0","ICD9:704.09","MESH:D000505","ICD9:704.00","Orphanet:79364","MEDGEN:7982","icd11.foundation:1313926062"],"synonyms":[{"name":"alopecia","type":"exact"},{"name":"alopecia areata","type":"narrow"},{"name":"hair loss","type":"exact"},{"name":"loss Of hair","type":"exact"}],"termid":"MONDO:0004907","terms_by_termid":{"MONDO:0014027":null,"MONDO:0014384":null,"MONDO:0054588":null},"xrefs":{"Monarch":{"xref_id":"0004907"}}}


id: PBO:0075168
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear ribonucleoprotein D2 pseudogene 2","termid":"PBO:0075168"}


id: PBO:0030495
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-stabilized_iron-sulfur_cluster_binding","termid":"PBO:0030495"}


id: GO:0006425
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of coupling glutamine to glutaminyl-tRNA, catalyzed by glutaminyl-tRNA synthetase. The glutaminyl-tRNA synthetase is a class-I synthetase. The activated amino acid is transferred to the 2'-OH group of a glutamine-accetping tRNA. The 2'-O-aminoacyl-tRNA will ultimately migrate to the 3' position via transesterification.","definition_xrefs":["ISBN:0716730510","GOC:mcc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA aminoacylation for protein translation","termid":"GO:0006418"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006399"}],"interesting_parent_ids":["GO:0008150","GO:0006399","GO:0006520","GO:0010467"],"is_obsolete":false,"name":"glutaminyl-tRNA aminoacylation","termid":"GO:0006425"}


id: PBO:0015711
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"external invertase, beta-fructofuranosidase","termid":"PBO:0015711"}


id: PBO:0059451
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Myb/SANT DNA binding domain containing 3","termid":"PBO:0059451"}


id: GO:0061974
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which bones are generated and organized as a result of the conversion of initial connective tissue surrounding cartilage into bone.","definition_xrefs":["PMID:21901110"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane bone morphogenesis","termid":"GO:0061973"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"perichondral bone morphogenesis","termid":"GO:0061974"}


id: GO:0090274
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency, extent of the regulated release of somatostatin from secretory granules in the D cells of the pancreas.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of somatostatin secretion","termid":"GO:0090273"},{"relation_name":"is_a","term_name":"positive regulation of peptide hormone secretion","termid":"GO:0090277"},{"relation_name":"positively_regulates","term_name":"somatostatin secretion","termid":"GO:0070253"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0023052","GO:0006810"],"is_obsolete":false,"name":"positive regulation of somatostatin secretion","termid":"GO:0090274"}


id: PBO:0068655
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 36, pseudogene","termid":"PBO:0068655"}


id: PBO:0073519
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SH3 domain binding protein 1","termid":"PBO:0073519"}


id: GO:0072532
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the meta-hydroxylation of any of the three phenolic rings on triferuloyl spermidine or any of its mono- or di-(hydroxyferuloyl)-spermidine derivatives.","definition_xrefs":["PMID:19779199","GOC:kad"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"tri-(feruloyl or hydroxyferuloyl) spermidine meta-hydroxylase activity","termid":"GO:0072532"}


id: PBO:0004560
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat protein Lub1","termid":"PBO:0004560"}


id: PBO:0028114
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-snoRNA_guided_rRNA_2'-O-methylation_abolished_at_specific_site","termid":"PBO:0028114"}


id: PBO:0017477
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-contains_process","termid":"PBO:0017477"}


id: PBO:0060884
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nephrocan, pseudogene","termid":"PBO:0060884"}


id: PBO:0051381
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 6D-41 (non-functional)","termid":"PBO:0051381"}


id: PBO:0041018
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BPI fold containing family B member 1","termid":"PBO:0041018"}


id: GO:0004451
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: isocitrate = glyoxylate + succinate.","definition_xrefs":["EC:4.1.3.1","RHEA:13245"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxo-acid-lyase activity","termid":"GO:0016833"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"isocitrate lyase activity","secondary_identifiers":["MetaCyc:ISOCIT-CLEAV-RXN","KEGG_REACTION:R00479"],"synonyms":[{"name":"ICL activity","type":"related"},{"name":"isocitrase activity","type":"related"},{"name":"isocitratase activity","type":"related"},{"name":"isocitrate glyoxylate-lyase (succinate-forming)","type":"related"},{"name":"isocitrate glyoxylate-lyase activity","type":"related"},{"name":"isocitritase activity","type":"related"},{"name":"threo-DS-isocitrate glyoxylate-lyase activity","type":"related"}],"termid":"GO:0004451"}


id: PBO:0015695
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eighteen interacting centromere protein Eic2","termid":"PBO:0015695"}


id: PBO:0054270
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1656","termid":"PBO:0054270"}


id: PBO:0090170
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription factor, CBF1/Su(H)/LAG-1 family Cbf12","termid":"PBO:0090170"}


id: MONDO:0000950
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Term generally used to describe complaints related to refractive error, ocular muscle imbalance, including pain or aching around the eyes, burning and itchiness of the eyelids, ocular fatigue, and headaches.","definition_xrefs":["MESH:D001248"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eye disorder","termid":"MONDO:0005328"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"asthenopia","secondary_identifiers":["DOID:10141","MEDGEN:2108","UMLS:C0004095"],"synonyms":[{"name":"accommodative strain","type":"exact"}],"termid":"MONDO:0000950","xrefs":{"Monarch":{"xref_id":"0000950"}}}


id: GO:0090024
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate, or extent of neutrophil chemotaxis. Neutrophil chemotaxis is the directed movement of a neutrophil cell, the most numerous polymorphonuclear leukocyte found in the blood, in response to an external stimulus, usually an infection or wounding.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of granulocyte chemotaxis","termid":"GO:0071623"},{"relation_name":"is_a","term_name":"regulation of neutrophil chemotaxis","termid":"GO:0090022"},{"relation_name":"is_a","term_name":"negative regulation of neutrophil migration","termid":"GO:1902623"},{"relation_name":"negatively_regulates","term_name":"neutrophil chemotaxis","termid":"GO:0030593"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of neutrophil chemotaxis","termid":"GO:0090024"}


id: GO:0035325
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a Toll-like protein, a pattern recognition receptor that binds pattern motifs from a variety of microbial sources to initiate an innate immune response.","definition_xrefs":["PMID:19076341"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor binding","termid":"GO:0005102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"Toll-like receptor binding","synonyms":[{"name":"TLR binding","type":"exact"}],"termid":"GO:0035325"}


id: PBO:0070345
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNY4 pseudogene 18","termid":"PBO:0070345"}


id: GO:0008908
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + isochorismate = 2,3-dihydroxy-2,3-dihydrobenzoate + pyruvate.","definition_xrefs":["RHEA:11112","EC:3.3.2.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukotriene-A4 hydrolase activity","termid":"GO:0004463"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"isochorismatase activity","secondary_identifiers":["KEGG_REACTION:R03037","MetaCyc:ISOCHORMAT-RXN"],"synonyms":[{"name":"2,3 dihydro-2,3 dihydroxybenzoate synthase activity","type":"related"},{"name":"2,3-dihydro-2,3-dihydroxybenzoate synthase activity","type":"related"},{"name":"2,3-dihydroxy-2,3-dihydrobenzoate synthase activity","type":"related"},{"name":"2,3-dihydroxy-2,3-dihydrobenzoic synthase activity","type":"related"},{"name":"isochorismate pyruvate-hydrolase activity","type":"related"}],"termid":"GO:0008908"}


id: PBO:0032735
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific protein Meu43","termid":"PBO:0032735"}


id: PBO:0049908
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hexosaminidase subunit alpha","termid":"PBO:0049908"}


id: PR:O13898
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ogm1 gene.","definition_xrefs":["UniProtKB:O13898","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dolichyl-phosphate-mannose--protein mannosyltransferase 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22A12.07c","synonyms":[{"name":"Spom972h-ogm1","type":"exact"}],"termid":"PR:O13898"}


id: FYPO:0005369
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population growth phenotype in which a cell population does not grow at low temperatures.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished vegetative cell population growth","termid":"FYPO:0001575"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002060"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0002057","FYPO:0002058","FYPO:0001985","FYPO:0005447","FYPO:0002060","FYPO:0000003"],"is_obsolete":false,"name":"abolished cell population growth at low temperature","synonyms":[{"name":"abolished cell population growth at low temperature during mitotic cell cycle","type":"related"},{"name":"abolished growth at low temperature","type":"broad"},{"name":"abolished vegetative cell population growth at low temperature","type":"exact"},{"name":"cell population growth at low temperature abolished","type":"exact"},{"name":"cold sensitive","type":"related"},{"name":"hypersensitive to low temperature","type":"related"},{"name":"sensitive to cold","type":"related"},{"name":"sensitive to low temperature","type":"related"},{"name":"sensitive to low temperature during vegetative growth","type":"related"},{"name":"temperature sensitive","type":"related"}],"termid":"FYPO:0005369"}


id: PR:O74840
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cue2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74840"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Smr domain-containing protein C1235.03 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1235.03","synonyms":[{"name":"Spom972h-cue2","type":"exact"}],"termid":"PR:O74840"}


id: PBO:0041242
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 1 open reading frame 115","termid":"PBO:0041242"}


id: MONDO:0002912
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A primary or metastatic malignant neoplasm that affects the brain stem.","definition_xrefs":["NCIT:C3570"],"direct_ancestors":[{"relation_name":"is_a","term_name":"infratentorial cancer","termid":"MONDO:0003107"},{"relation_name":"is_a","term_name":"brainstem neoplasm","termid":"MONDO:0021228"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"brainstem cancer","secondary_identifiers":["NCIT:C5967","MESH:D020295","ICD9:191.7","DOID:4203","MEDGEN:57566","SCTID:363473003","UMLS:C0153641"],"synonyms":[{"name":"brain stem cancer","type":"related"},{"name":"brainstem cancer","type":"exact"},{"name":"cancer of brainstem","type":"exact"},{"name":"malignant brain stem neoplasm","type":"broad"},{"name":"malignant brain stem tumor","type":"broad"},{"name":"malignant brain stem tumour","type":"broad"},{"name":"malignant brainstem neoplasm","type":"broad"},{"name":"malignant brainstem tumor","type":"broad"},{"name":"malignant brainstem tumour","type":"broad"},{"name":"malignant neoplasm of brain stem","type":"exact"},{"name":"malignant neoplasm of brainstem","type":"exact"},{"name":"malignant neoplasm of the brain stem","type":"exact"},{"name":"malignant neoplasm of the brainstem","type":"exact"},{"name":"malignant tumor of brain stem","type":"exact"},{"name":"malignant tumor of brainstem","type":"exact"},{"name":"malignant tumor of the brain stem","type":"exact"},{"name":"malignant tumor of the brainstem","type":"exact"},{"name":"malignant tumour of brain stem","type":"exact"},{"name":"malignant tumour of brainstem","type":"exact"},{"name":"malignant tumour of the brain stem","type":"exact"},{"name":"malignant tumour of the brainstem","type":"exact"},{"name":"neoplasm of adult brain stem","type":"broad"},{"name":"neoplasm of brain stem","type":"broad"},{"name":"primary brain stem neoplasm","type":"broad"},{"name":"primary brain stem tumor","type":"broad"},{"name":"primary brain stem tumour","type":"broad"},{"name":"tumor of the brainstem","type":"broad"},{"name":"tumour of adult brainstem","type":"broad"},{"name":"tumour of the brainstem","type":"broad"}],"termid":"MONDO:0002912","xrefs":{"Monarch":{"xref_id":"0002912"}}}


id: PBO:0075541
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"speedy/RINGO cell cycle regulator family member E21","termid":"PBO:0075541"}


id: PBO:0036078
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_deactivation_of_mitotic_spindle_assembly_checkpoint","termid":"PBO:0036078"}


id: RO:0002301
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"results_in_ending_of","termid":"RO:0002552"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"results_in_developmental_regression_of","termid":"RO:0002301"}


id: MONDO:0007319
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A chronic inherited arthropathy characterized by chondrocalcinosis (CC; i.e. cartilage calcification), often associated with recurrent acute calcium pyrophosphate (CPP) crystal arthritis and polyarticular osteoarthritis (OA).","definition_xrefs":["Orphanet:1416"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chondrocalcinosis","termid":"MONDO:0001314"},{"relation_name":"is_a","term_name":"rheumatic disorder","termid":"MONDO:0005554"},{"relation_name":"is_a","term_name":"inborn errors of metabolism","termid":"MONDO:0019052"},{"relation_name":"is_a","term_name":"hereditary disorder of connective tissue","termid":"MONDO:0023603"},{"relation_name":"is_a","term_name":"abnormal mineralization disorder","termid":"MONDO:0800096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"chondrocalcinosis 2","secondary_identifiers":["MESH:C563162","OMIM:118600","UMLS:C0856830","MEDGEN:163633","GARD:1292"],"synonyms":[{"name":"CCAL2","type":"related"},{"name":"CPPDD","type":"related"},{"name":"Familial Calcium Pyrophosphate Deposition Disease","type":"exact"},{"name":"Pseudogout, familial","type":"related"},{"name":"calcium gout","type":"related"},{"name":"calcium gout, familial","type":"related"},{"name":"calcium pyrophosphate arthropathy","type":"related"},{"name":"calcium pyrophosphate arthropathy, familial","type":"related"},{"name":"calcium pyrophosphate dihydrate crystal deposition disease","type":"exact"},{"name":"calcium pyrophosphate dihydrate deposition disease","type":"related"},{"name":"chondrocalcinosis 2","type":"exact"},{"name":"chondrocalcinosis familial articular","type":"related"},{"name":"chondrocalcinosis type 2","type":"exact"},{"name":"chondrocalcinosis, familial articular","type":"related"},{"name":"familial CC","type":"exact"},{"name":"familial CPPD","type":"exact"},{"name":"familial articular chondrocalcinosis","type":"exact"},{"name":"familial calcium pyrophosphate deposition","type":"exact"},{"name":"familial calcium pyrophosphate dihydrate deposition disease","type":"exact"},{"name":"hereditary CC","type":"exact"},{"name":"hereditary articular chondrocalcinosis","type":"exact"},{"name":"hereditary calcium pyrophosphate deposition","type":"exact"}],"termid":"MONDO:0007319","xrefs":{"Monarch":{"xref_id":"0007319"}}}


id: PBO:0080703
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Wnt family member 7A","termid":"PBO:0080703"}


id: PBO:0005169
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase activator Mob2","termid":"PBO:0005169"}


id: PBO:0034492
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_biological_process","termid":"PBO:0034492"}


id: MONDO:0014883
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any hypertrophic cardiomyopathy in which the cause of the disease is a mutation in the FLNC gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial hypertrophic cardiomyopathy","termid":"MONDO:0024573"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"hypertrophic cardiomyopathy 26","secondary_identifiers":["MEDGEN:934716","UMLS:C4310749","DOID:0110327","OMIM:617047"],"synonyms":[{"name":"CMH26","type":"exact"},{"name":"FLNC hypertrophic cardiomyopathy","type":"exact"},{"name":"cardiomyopathy familial hypertrophic 26","type":"exact"},{"name":"cardiomyopathy, familial hypertrophic, 26","type":"exact"},{"name":"cardiomyopathy, familial hypertrophic, type 26","type":"exact"},{"name":"cardiomyopathy, familial restrictive 5","type":"exact"},{"name":"cardiomyopathy, familial restrictive, 5","type":"related"},{"name":"hypertrophic cardiomyopathy caused by mutation in FLNC","type":"exact"},{"name":"hypertrophic cardiomyopathy type 26","type":"exact"}],"termid":"MONDO:0014883","xrefs":{"Monarch":{"xref_id":"0014883"}}}


id: GO:0102518
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: (11Z)-eicosenoyl-CoA + NADH + O2 + H+ = lesqueroloyl-CoA + NAD + H2O.","definition_xrefs":["PMID:8784737","PMID:9680976","GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete (11Z)-eicosenoate 14-hydroxylase activity (obsolete GO:0102518)","termid":"GO:0102518"}


id: GO:0060261
data:
  {"annotated_genes":["SJAG_00909","SJAG_02551","SJAG_04647","SJAG_03622","SJAG_01771","SJAG_03421","SJAG_00297","SJAG_05341","SJAG_04820","SJAG_00904","SJAG_02391","SJAG_02849","SJAG_05203","SJAG_02494","SJAG_03573","SJAG_04099","SJAG_00342","SJAG_00766","SJAG_01952","SJAG_04705","SJAG_00150","SJAG_03590","SJAG_01403"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87810,90728,91042,94702,94813,95744,96224,99033,99384,102317,103780,104038,106065,106420,106610,106745,109100,109127,115115,115680,119317],"is_not":false,"summary":null,"term":"GO:0060261"},{"annotations":[79940,90072],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045899"}]},"cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of a process involved in starting transcription from an RNA polymerase II promoter.","definition_xrefs":["GOC:txnOH","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of transcription by RNA polymerase II","termid":"GO:0045944"},{"relation_name":"is_a","term_name":"regulation of transcription initiation by RNA polymerase II","termid":"GO:0060260"},{"relation_name":"is_a","term_name":"positive regulation of DNA-templated transcription initiation","termid":"GO:2000144"},{"relation_name":"positively_regulates","term_name":"transcription initiation at RNA polymerase II promoter","termid":"GO:0006367"}],"gene_count":23,"genes_by_uniquename":{"SJAG_00150":null,"SJAG_00297":null,"SJAG_00342":null,"SJAG_00766":null,"SJAG_00904":null,"SJAG_00909":null,"SJAG_01403":null,"SJAG_01771":null,"SJAG_01952":null,"SJAG_02391":null,"SJAG_02494":null,"SJAG_02551":null,"SJAG_02849":null,"SJAG_03421":null,"SJAG_03573":null,"SJAG_03590":null,"SJAG_03622":null,"SJAG_04099":null,"SJAG_04647":null,"SJAG_04705":null,"SJAG_04820":null,"SJAG_05203":null,"SJAG_05341":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0006351"}],"interesting_parent_ids":["GO:0006355","GO:0010467","GO:0006351","GO:0008150"],"is_obsolete":false,"name":"positive regulation of transcription initiation by RNA polymerase II","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"positive regulation of transcription initiation from RNA polymerase II promoter","type":"exact"}],"termid":"GO:0060261","terms_by_termid":{"GO:0045899":null,"GO:0060261":null}}


id: MONDO:0800222
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pelvic organ prolapse, susceptibility to, 1","synonyms":[{"name":"PVOP1","type":"exact"}],"termid":"MONDO:0800222","xrefs":{"Monarch":{"xref_id":"0800222"}}}


id: PBO:0071698
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPL38 pseudogene 4","termid":"PBO:0071698"}


id: GO:0090677
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A phenotypic switching process where a cell reversibly differentiates and dedifferentiates from one cell type into another.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenotypic switching","termid":"GO:0036166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"reversible differentiation","termid":"GO:0090677"}


id: PBO:0084923
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Monoglyceride lipase (MGL) that hydrolyzes fatty acid ethyl esters; required for removal of toxic metabolites in ethanol producing yeast cells; localizes to lipid particles and membranes; member of the eukaryotic serine hydrolase family; functional ortholog of mammalian MGL","termid":"PBO:0084923"}


id: PBO:0064575
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"periostin","termid":"PBO:0064575"}


id: GO:0099126
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex acting as ligand of the transforming growth factor beta receptor complex, typically a homodimer of any of the TFGbeta isoforms. The precursor of TGFbeta proteins is cleaved into mature TGFbeta and the latency-associated peptide (LAP), which remains non-covalently linked to mature TGFbeta rendering it inactive. TGFbeta is activated by dimerization and dissociation of the LAP.","definition_xrefs":["PMID:22943793","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"collagen-containing extracellular matrix","termid":"GO:0062023"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"transforming growth factor beta complex","synonyms":[{"name":"TGF-beta complex","type":"exact"},{"name":"TGF-beta dimer","type":"exact"},{"name":"TGFB complex","type":"exact"},{"name":"TGFB dimer","type":"exact"},{"name":"TGFbeta complex","type":"exact"},{"name":"TGFbeta dimer","type":"exact"}],"termid":"GO:0099126"}


id: GO:0001919
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of receptor recycling.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signaling","termid":"GO:0023051"},{"relation_name":"is_a","term_name":"regulation of macromolecule metabolic process","termid":"GO:0060255"},{"relation_name":"regulates","term_name":"receptor recycling","termid":"GO:0001881"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of receptor recycling","termid":"GO:0001919"}


id: SO:0000095
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A plastid gene from leucoplast sequence.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_origin","term_name":"leucoplast_sequence","termid":"SO:0000747"},{"relation_name":"is_a","term_name":"plastid_gene","termid":"SO:0000090"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucoplast_gene","synonyms":[{"name":"leucoplast gene","type":"exact"}],"termid":"SO:0000095"}


id: PBO:0078642
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA isopentenyltransferase 1","termid":"PBO:0078642"}


id: GO:0102500
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: beta-D-glucose + a plant soluble heteroglycan = a plant soluble heteroglycan + maltose.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete beta-maltose 4-alpha-glucanotransferase activity (obsolete GO:0102500)","termid":"GO:0102500"}


id: PBO:0080374
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar protein sorting 4 homolog A","termid":"PBO:0080374"}


id: FYPO:0001009
data:
  {"alleles_by_uniquename":{"SJAG_02592:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02592","name":"sty1delta","uniquename":"SJAG_02592:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[119698,119774],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0002998"}]},"cv_name":"fission_yeast_phenotype","definition":"A cytokinesis phenotype observed in the vegetative growth phase of the life cycle in which the assembly and distribution of actin filaments and associated proteins does not occur, resulting in the failure to form an actomyosin contractile ring.","definition_xrefs":["PomBase:mah","PMID:19713940"],"direct_ancestors":[{"relation_name":"has_output","term_name":"actomyosin contractile ring absent","termid":"FYPO:0001008"},{"relation_name":"is_a","term_name":"abnormal actomyosin contractile ring assembly","termid":"FYPO:0000161"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02592":null},"genotype_count":1,"genotypes_by_uniquename":{"sty1delta":{"display_name":"sty1delta","display_uniquename":"sty1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02592:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0004803"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000032","FYPO:0000002","FYPO:0004803","FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000631"],"is_obsolete":false,"name":"abolished actomyosin contractile ring assembly","references_by_uniquename":{"PMID:32915139":null,"PMID:33791858":null},"single_locus_annotated_genes":["SJAG_02592"],"single_locus_genotype_uniquenames":["sty1delta"],"synonyms":[{"name":"abolished actomyosin contractile ring assembly during mitotic cell cycle","type":"related"},{"name":"abolished actomyosin contractile ring assembly during vegetative growth","type":"exact"},{"name":"abolished actomyosin contractile ring formation","type":"related"},{"name":"abolished contractile ring assembly","type":"exact"},{"name":"abolished cytokinetic contractile ring assembly","type":"exact"},{"name":"abolished cytokinetic ring assembly","type":"related"},{"name":"abolished cytokinetic ring formation","type":"related"},{"name":"abolished mitotic contractile ring assembly","type":"exact"},{"name":"actomyosin contractile ring assembly abolished","type":"exact"},{"name":"cytokinesis defects, contractile ring actin, absent","type":"related"}],"termid":"FYPO:0001009","terms_by_termid":{"FYECO:0000248":null,"FYPO:0002998":null,"FYPO_EXT:0000001":null}}


id: FYPO:0006869
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which methylation of lysine at position 36 of histone H3 does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished biological process","termid":"FYPO:0005448"},{"relation_name":"is_a","term_name":"abnormal histone methylation","termid":"FYPO:0006870"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0002494","FYPO:0000002","FYPO:0002274"],"is_obsolete":false,"name":"abolished histone H3-K36 methylation","synonyms":[{"name":"abolished histone H3 K36 methylation","type":"exact"},{"name":"abolished histone H3K36me","type":"exact"},{"name":"abolished histone lysine H3 K36 methylation","type":"exact"},{"name":"histone H3-K36 methylation abolished","type":"exact"},{"name":"histone H3-K36 methylation absent","type":"exact"}],"termid":"FYPO:0006869"}


id: GO:0061156
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the pulmonary artery are generated and organized. The pulmonary artery is the artery that carries blood from the heart to the lungs.","definition_xrefs":["GOC:yaf","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"artery morphogenesis","termid":"GO:0048844"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pulmonary artery morphogenesis","termid":"GO:0061156"}


id: MONDO:0700150
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A tumor composed of mast cells that occurs in dogs.","definition_xrefs":["NCIT:C129077"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mast cell tumor, dog","termid":"MONDO:1011555"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"canine mastocytoma","termid":"MONDO:0700150","xrefs":{"Monarch":{"xref_id":"0700150"}}}


id: PBO:0064529
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase III subunit G pseudogene 1","termid":"PBO:0064529"}


id: GO:1902705
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of hexose to butyrate.","definition_xrefs":["GO_REF:0000093","PMID:18727018","GOC:TermGenie","PMID:19539744","GOC:mengo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete hexose catabolic process to butyrate (obsolete GO:1902705)","synonyms":[{"name":"acidogenesis","type":"broad"},{"name":"hexose breakdown to butyrate","type":"exact"},{"name":"hexose catabolism to butyrate","type":"exact"},{"name":"hexose degradation to butyrate","type":"exact"}],"termid":"GO:1902705"}


id: GO:0046117
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of queuosines, any of a series of nucleosides found in tRNA and having an additional pentenyl ring added via an NH group to the methyl group of 7-methylguanosine. The pentenyl ring may carry other substituents.","definition_xrefs":["ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete queuosine catabolic process (obsolete GO:0046117)","synonyms":[{"name":"queuosine breakdown","type":"exact"},{"name":"queuosine catabolism","type":"exact"},{"name":"queuosine degradation","type":"exact"}],"termid":"GO:0046117"}


id: MONDO:0007417
data:
  {"annotated_genes":["SJAG_04167"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87057],"is_not":false,"summary":null,"term":"MONDO:0007417"}]},"cv_name":"mondo","definition":"Darier disease (DD) is a keratinization disorder characterized by the development of keratotic papules in seborrheic areas and specific nail anomalies.","definition_xrefs":["Orphanet:218"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epidermal disease","termid":"MONDO:0019268"},{"relation_name":"is_a","term_name":"hereditary skin disorder","termid":"MONDO:0100118"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04167":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"Darier disease","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MedDRA:10023369","SCTID:48611009","NCIT:C84665","MEDGEN:5956","GARD:6243","DOID:2734","ICD9:757.39","MESH:D007644","OMIM:124200","UMLS:C0022595","Wikipedia:Darier%27s_disease","icd11.foundation:643994486"],"synonyms":[{"name":"DAR","type":"related"},{"name":"Darier White disease","type":"related"},{"name":"Darier disease","type":"exact"},{"name":"Darier disease, acral hemorrhagic type","type":"related"},{"name":"Darier disease, segmental","type":"related"},{"name":"Darier's disease","type":"exact"},{"name":"Darier-White disease","type":"exact"},{"name":"Keratosis Follicularis","type":"exact"},{"name":"dar","type":"related"},{"name":"keratosis follicularis","type":"exact"}],"termid":"MONDO:0007417","terms_by_termid":{"MONDO:0007417":null},"xrefs":{"Monarch":{"xref_id":"0007417"}}}


id: PBO:0002447
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonuclease II (RNB) family (predicted)","termid":"PBO:0002447"}


id: GO:0004653
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-N-acetyl-D-galactosamine + polypeptide = UDP + N-acetyl-D-galactosaminyl-polypeptide. This reaction is the modification of serine or threonine residues in polypeptide chains by the transfer of a N-acetylgalactose from UDP-N-acetylgalactose to the hydroxyl group of the amino acid; it is the first step in O-glycan biosynthesis.","definition_xrefs":["EC:2.4.1.41","ISBN:0879695595"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetylgalactosaminyltransferase activity","termid":"GO:0008376"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0003674","GO:0016757","GO:0003824","GO:0016740","GO:0140096"],"is_obsolete":false,"name":"polypeptide N-acetylgalactosaminyltransferase activity","secondary_identifiers":["Reactome:R-HSA-5096532","Reactome:R-HSA-8851619","MetaCyc:2.4.1.41-RXN","Reactome:R-HSA-5096537","Reactome:R-HSA-9683760","Reactome:R-HSA-9694438","Reactome:R-HSA-913675"],"synonyms":[{"name":"UDP-GalNAc:polypeptide N-acetylgalactosaminyl transferase activity","type":"related"},{"name":"UDP-GalNAc:polypeptide N-acetylgalactosaminyltransferase activity","type":"related"},{"name":"UDP-N-acetyl-D-galactosamine:polypeptide N-acetylgalactosaminyl-transferase activity","type":"related"},{"name":"UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase activity","type":"related"},{"name":"UDP-N-acetylgalactosamine-glycoprotein N-acetylgalactosaminyltransferase activity","type":"related"},{"name":"UDP-N-acetylgalactosamine-protein N-acetylgalactosaminyltransferase activity","type":"related"},{"name":"UDP-N-acetylgalactosamine:kappa-casein polypeptide N-acetylgalactosaminyltransferase activity","type":"related"},{"name":"UDP-N-acetylgalactosamine:polypeptide N-acetylgalactosaminyltransferase activity","type":"related"},{"name":"UDP-N-acetylgalactosamine:protein N-acetylgalactosaminyl transferase activity","type":"related"},{"name":"UDP-acetylgalactosamine-glycoprotein acetylgalactosaminyltransferase activity","type":"related"},{"name":"UDP-acetylgalactosamine:peptide-N-galactosaminyltransferase activity","type":"related"},{"name":"glycoprotein acetylgalactosaminyltransferase activity","type":"related"},{"name":"polypeptide-N-acetylgalactosamine transferase activity","type":"related"},{"name":"protein-UDP acetylgalactosaminyltransferase activity","type":"related"},{"name":"uridine diphosphoacetylgalactosamine-glycoprotein acetylgalactosaminyltransferase activity","type":"related"}],"termid":"GO:0004653"}


id: PBO:0038669
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ACSL3 pseudogene 1","termid":"PBO:0038669"}


id: GO:0043527
data:
  {"annotated_genes":["SJAG_04181","SJAG_04848","SJAG_02637","SJAG_02386","SJAG_04890","SJAG_04680"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[75289,74425],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031515"},{"annotations":[75804,104497],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043528"},{"annotations":[119372,116095],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106143"}]},"cv_name":"cellular_component","definition":"A multimeric protein complex involved in the methylation of specific nucleotides in tRNA.","definition_xrefs":["PMID:24904644","GOC:jl","PMID:9851972"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase complex","termid":"GO:0034708"}],"gene_count":6,"genes_by_uniquename":{"SJAG_02386":null,"SJAG_02637":null,"SJAG_04181":null,"SJAG_04680":null,"SJAG_04848":null,"SJAG_04890":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"tRNA methyltransferase complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0043527","terms_by_termid":{"GO:0031515":null,"GO:0043528":null,"GO:0106143":null}}


id: PATO:0000922
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000922 absolute width (obsolete PATO:0000922)","termid":"PATO:0000922"}


id: PBO:0058864
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 9851","termid":"PBO:0058864"}


id: PBO:0051983
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"jagged canonical Notch ligand 2","termid":"PBO:0051983"}


id: GO:0061709
data:
  {"annotated_genes":["SJAG_04655","SJAG_01135","SJAG_00004","SJAG_02852","SJAG_04502","SJAG_00053","SJAG_04435","SJAG_05289","SJAG_02539","SJAG_04232","SJAG_04219","SJAG_03851","SJAG_03100","SJAG_00059","SJAG_01382","SJAG_04991","SJAG_03170"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[73011,73498,73506,74983,77439,78591,80024,80056,80115,80475,90775,99760,104742,108943,111043,116980],"is_not":false,"summary":null,"term":"GO:0061709"},{"annotations":[89885],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0140501"}]},"cv_name":"biological_process","definition":"The selective autohagy process in which parts of the endoplasmic reticulum are loaded into autophagosomes, delivered to the vacuole, and degraded in response to changing cellular conditions.","definition_xrefs":["GOC:autophagy","PMID:26040717","PMID:22481944","GOC:dph","PMID:24060720"],"direct_ancestors":[{"relation_name":"is_a","term_name":"macroautophagy","termid":"GO:0016236"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00004":null,"SJAG_00053":null,"SJAG_00059":null,"SJAG_01135":null,"SJAG_01382":null,"SJAG_02539":null,"SJAG_02852":null,"SJAG_03100":null,"SJAG_03170":null,"SJAG_03851":null,"SJAG_04219":null,"SJAG_04232":null,"SJAG_04435":null,"SJAG_04502":null,"SJAG_04655":null,"SJAG_04991":null,"SJAG_05289":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006914"}],"interesting_parent_ids":["GO:0008150","GO:0006914"],"is_obsolete":false,"name":"reticulophagy","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:1990766"],"synonyms":[{"name":"ER autophagy","type":"exact"},{"name":"ER degradation","type":"related"},{"name":"ER-phagy","type":"exact"},{"name":"autophagy of the ER","type":"exact"},{"name":"autophagy of the endoplasmic reticulum","type":"exact"},{"name":"endoplasmic reticulum autophagy","type":"exact"},{"name":"endoplasmic reticulum degradation","type":"related"}],"termid":"GO:0061709","terms_by_termid":{"GO:0061709":null,"GO:0140501":null}}


id: PR:O59739
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- bag102 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O59739"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BAG family molecular chaperone regulator 1B (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC530.03c","synonyms":[{"name":"BAG-1B (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-bag102","type":"exact"}],"termid":"PR:O59739"}


id: GO:0050744
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of a protein-FMN linkage via 3'-(8alpha-FMN)-L-histidine.","definition_xrefs":["RESID:AA0353"],"gene_count":0,"genotype_count":0,"name":"obsolete protein-FMN linkage via 3'-(8alpha-FMN)-L-histidine (obsolete GO:0050744)","termid":"GO:0050744"}


id: GO:0050566
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-glutamine + aspartyl-tRNA(Asn) + ATP = L-glutamate + asparaginyl-tRNA(Asn) + phosphate + ADP.","definition_xrefs":["MetaCyc:6.3.5.6-RXN","EC:6.3.5.6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-nitrogen ligase activity, with glutamine as amido-N-donor","termid":"GO:0016884"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a tRNA","termid":"GO:0140101"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0140101","GO:0140098","GO:0016874","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"asparaginyl-tRNA synthase (glutamine-hydrolyzing) activity","secondary_identifiers":["RHEA:14513","Wikipedia:Asparaginyl-tRNA_synthase_(glutamine-hydrolysing)"],"synonyms":[{"name":"Asp-AdT activity","type":"related"},{"name":"Asp-tRNA(Asn) amidotransferase activity","type":"related"},{"name":"Asp-tRNAAsn amidotransferase activity","type":"related"},{"name":"Asp-tRNAAsn:L-glutamine amido-ligase (ADP-forming)","type":"related"},{"name":"asparaginyl-tRNA synthase (glutamine-hydrolysing)","type":"related"},{"name":"aspartyl-tRNA(Asn) amidotransferase activity","type":"related"},{"name":"aspartyl-tRNAAsn amidotransferase activity","type":"related"},{"name":"aspartyl-tRNAAsn:L-glutamine amido-ligase (ADP-forming)","type":"related"}],"termid":"GO:0050566"}


id: MONDO:0957481
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"pregnancy associated osteoporosis","termid":"MONDO:0100194"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"idiopathic pregnancy-associated osteoporosis","secondary_identifiers":["UMLS:C5782297","MEDGEN:1843391","Orphanet:647823"],"termid":"MONDO:0957481","xrefs":{"Monarch":{"xref_id":"0957481"}}}


id: SO:0000822
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A chromosome originating in a cyanelle.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_origin","term_name":"cyanelle_sequence","termid":"SO:0000746"},{"relation_name":"is_a","term_name":"chromosome","termid":"SO:0000340"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyanelle_chromosome","synonyms":[{"name":"cyanelle chromosome","type":"exact"}],"termid":"SO:0000822"}


id: PBO:0108919
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"STAG3 cohesin complex component like 5, pseudogene","termid":"PBO:0108919"}


id: MONDO:1012714
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any difference of sexual development that occurs in dogs with a XY karyotype.","definition_xrefs":["OMIA:001601-9615"],"direct_ancestors":[{"relation_name":"is_a","term_name":"difference of sexual differentiation, non-human animal","termid":"MONDO:0700105"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"XY difference of sexual development, dog","termid":"MONDO:1012714","xrefs":{"Monarch":{"xref_id":"1012714"}}}


id: GO:1902455
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of stem cell population maintenance.","definition_xrefs":["PMID:22969033","GOC:hjd","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"regulation of stem cell population maintenance","termid":"GO:2000036"},{"relation_name":"negatively_regulates","term_name":"stem cell population maintenance","termid":"GO:0019827"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of stem cell population maintenance","synonyms":[{"name":"down regulation of maintenance of pluripotency","type":"related"},{"name":"down regulation of stem cell maintenance","type":"exact"},{"name":"down-regulation of maintenance of pluripotency","type":"related"},{"name":"down-regulation of stem cell maintenance","type":"exact"},{"name":"downregulation of maintenance of pluripotency","type":"related"},{"name":"downregulation of stem cell maintenance","type":"exact"},{"name":"inhibition of maintenance of pluripotency","type":"related"},{"name":"inhibition of stem cell maintenance","type":"narrow"},{"name":"negative regulation of maintenance of pluripotency","type":"related"}],"termid":"GO:1902455"}


id: PBO:0066322
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RBX1 pseudogene 2","termid":"PBO:0066322"}


id: PBO:0030853
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_kinase_activity","termid":"PBO:0030853"}


id: GO:0097385
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A programmed necrotic cell death occurring as a result of a starvation stimulus (deprivation of nourishment).","definition_xrefs":["PMID:13679856","GOC:mtg_apoptosis","GOC:pg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to starvation","termid":"GO:0042594"},{"relation_name":"is_a","term_name":"programmed necrotic cell death","termid":"GO:0097300"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"programmed necrotic cell death in response to starvation","synonyms":[{"name":"necrotic cell death in response to starvation","type":"broad"}],"termid":"GO:0097385"}


id: PBO:0046360
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endosulfine alpha pseudogene 2","termid":"PBO:0046360"}


id: PBO:0080396
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VPS26 endosomal protein sorting factor C","termid":"PBO:0080396"}


id: MONDO:0024486
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete familial chronic mucocutaneous candidiasis (obsolete MONDO:0024486)","termid":"MONDO:0024486","xrefs":{"Monarch":{"xref_id":"0024486"}}}


id: PBO:0069460
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 725, pseudogene","termid":"PBO:0069460"}


id: PBO:0043503
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"contactin associated protein family member 3","termid":"PBO:0043503"}


id: GO:0030429
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-kynurenine + H2O = anthranilate + L-alanine + H+. Also acts on 3'-hydroxykynurenine and some other (3-arylcarbonyl)- alanines.","definition_xrefs":["PMID:17300176","EC:3.7.1.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on acid carbon-carbon bonds, in ketonic substances","termid":"GO:0016823"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"kynureninase activity","secondary_identifiers":["MetaCyc:KYNURENINASE-RXN","Reactome:R-HSA-71217"],"synonyms":[{"name":"L-kynurenine hydrolase activity","type":"related"},{"name":"kynurenine hydrolase activity","type":"related"}],"termid":"GO:0030429"}


id: GO:0071591
data:
  {"annotated_genes":["SJAG_03096"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[70223],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071592"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving nicotinic acid riboside, the product of the formation of a glycosidic bond between ribose and nicotinic acid.","definition_xrefs":["GOC:mah","PMID:19846558"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyridine nucleoside metabolic process","termid":"GO:0070637"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03096":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"nicotinic acid riboside metabolic process","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"D-ribosylnicotinic acid metabolic process","type":"exact"},{"name":"nicotinic acid riboside metabolism","type":"exact"}],"termid":"GO:0071591","terms_by_termid":{"GO:0071592":null}}


id: MONDO:0043094
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"inherited ichthyosis","termid":"MONDO:0015947"},{"relation_name":"is_a","term_name":"ichthyosis","termid":"MONDO:0019269"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"ichthyosis, follicular","secondary_identifiers":["MEDGEN:98025","GARD:2355","NANDO:1200628","SCTID:238627002","UMLS:C0406344"],"synonyms":[{"name":"follicular ichthyosis","type":"exact"}],"termid":"MONDO:0043094","xrefs":{"Monarch":{"xref_id":"0043094"}}}


id: GO:2000900
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving a cyclodextrin.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligosaccharide metabolic process","termid":"GO:0009311"},{"relation_name":"is_a","term_name":"glucan metabolic process","termid":"GO:0044042"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"cyclodextrin metabolic process","synonyms":[{"name":"cyclodextrin metabolism","type":"exact"}],"termid":"GO:2000900"}


id: PBO:0056616
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MTOR associated protein, eak-7 homolog","termid":"PBO:0056616"}


id: PBO:0064796
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase, Mg2+/Mn2+ dependent 1N (putative)","termid":"PBO:0064796"}


id: GO:0061787
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A peptidoglycan endopeptidase activity that acts on a peptidoglycan cross-bridge.","definition_xrefs":["PMID:22748813","GOC:dph","GOC:jh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidoglycan endopeptidase activity","termid":"GO:0061785"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0008233"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0140096","GO:0003674","GO:0008233","GO:0016787"],"is_obsolete":false,"name":"peptidoglycan cross-bridge peptide endopeptidase activity","synonyms":[{"name":"lysostaphin activity","type":"narrow"}],"termid":"GO:0061787"}


id: PBO:0053940
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1241","termid":"PBO:0053940"}


id: PBO:0077856
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TPM1 antisense RNA","termid":"PBO:0077856"}


id: GO:0140523
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A GTPase activity that mediates the joining of two lipid bilayers to form a single membrane.","definition_xrefs":["PMID:29663589"],"direct_ancestors":[{"relation_name":"is_a","term_name":"GTPase activity","termid":"GO:0003924"},{"relation_name":"is_a","term_name":"fusogenic activity","termid":"GO:0140522"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003924"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0003924","GO:0016787"],"is_obsolete":false,"name":"GTPase-dependent fusogenic activity","synonyms":[{"name":"membrane fusion GTPase activity","type":"exact"}],"termid":"GO:0140523"}


id: PBO:0064953
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRAME family member 5","termid":"PBO:0064953"}


id: GO:0001312
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Replication of rDNA following its excision from the chromosome of dividing cells as they age. Extrachromosomal rDNA forms a circle that contains at least one autonomously replicating sequence (ARS), which supports replication independent of chromosomal replication.","definition_xrefs":["GOC:jh","PMID:12044934"],"gene_count":0,"genotype_count":0,"name":"obsolete replication of extrachromosomal rDNA circles involved in replicative cell aging (obsolete GO:0001312)","synonyms":[{"name":"replication of extrachromosomal rDNA circles during replicative cell ageing","type":"related"},{"name":"replication of extrachromosomal rDNA circles during replicative cell aging","type":"related"},{"name":"replication of extrachromosomal ribosomal DNA circles during replicative cell aging","type":"related"}],"termid":"GO:0001312"}


id: GO:1901762
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of oxytetracycline.","definition_xrefs":["PMID:8163168","GOC:yaf","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyketide catabolic process","termid":"GO:0030640"},{"relation_name":"is_a","term_name":"oxytetracycline metabolic process","termid":"GO:1901761"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"oxytetracycline catabolic process","synonyms":[{"name":"oxytetracycline breakdown","type":"exact"},{"name":"oxytetracycline catabolism","type":"exact"},{"name":"oxytetracycline degradation","type":"exact"}],"termid":"GO:1901762"}


id: FYPO:0002062
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the growth of a cell is normal (i.e. indistinguishable from wild type). Cell growth is the process in which a cell irreversibly increases in size over time by accretion and biosynthetic production of matter similar to that already present.","definition_xrefs":["GO:0016049","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process","termid":"FYPO:0000627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal cell growth","termid":"FYPO:0002062"}


id: MONDO:0000891
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A fibrolamellar carcinoma that is characterized by the presence of both pure fibrolamellar hepatocellular carcinoma and and conventional hepatocellular carcinoma components.","definition_xrefs":["DOID:0080182"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fibrolamellar hepatocellular carcinoma","termid":"MONDO:0006210"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0002515","MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"mixed fibrolamellar hepatocellular carcinoma","termid":"MONDO:0000891","xrefs":{"Monarch":{"xref_id":"0000891"}}}


id: FYPO:0006093
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate or other property of a microfilament motor activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal molecular function","termid":"FYPO:0000707"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0001985","FYPO:0000707"],"is_obsolete":false,"name":"abnormal microfilament motor activity","synonyms":[{"name":"abnormal actin filament motor activity","type":"exact"},{"name":"abnormal microfilament motor (ATPase) activity","type":"exact"},{"name":"abnormal myosin ATPase activity","type":"related"}],"termid":"FYPO:0006093"}


id: GO:0030897
data:
  {"annotated_genes":["SJAG_00204","SJAG_00380","SJAG_05184","SJAG_01598","SJAG_05194","SJAG_03005","SJAG_04966","SJAG_01772"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[94678,105004,71645,80555,80181,77493,71561,75471],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902500"}]},"cv_name":"cellular_component","definition":"A multimeric protein complex that associates with the vacuolar membrane, late endosomal (multivesicular body) and lysosomal membranes. HOPS is a tethering complex involved in vesicle fusion.","definition_xrefs":["PMID:10944212","PMID:23645161"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"is_a","term_name":"vesicle tethering complex","termid":"GO:0099023"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00204":null,"SJAG_00380":null,"SJAG_01598":null,"SJAG_01772":null,"SJAG_03005":null,"SJAG_04966":null,"SJAG_05184":null,"SJAG_05194":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"HOPS complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0030897","terms_by_termid":{"GO:1902500":null}}


id: MONDO:0013703
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive non-syndromic intellectual disability","termid":"MONDO:0019502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0037792"}],"interesting_parent_ids":["MONDO:0037792","MONDO:0006025","MONDO:0005066"],"is_obsolete":false,"name":"intellectual disability, autosomal recessive 33","secondary_identifiers":["MEDGEN:482169","OMIM:614341","DOID:0081194","UMLS:C3280539","GARD:22556"],"synonyms":[{"name":"MRT33","type":"exact"},{"name":"intellectual disability, autosomal recessive 33","type":"exact"},{"name":"mental retardation, autosomal recessive 33","type":"related"}],"termid":"MONDO:0013703","xrefs":{"Monarch":{"xref_id":"0013703"}}}


id: GO:0008770
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: [acyl-carrier protein] + H2O = 4'-phosphopantetheine + apoprotein.","definition_xrefs":["EC:3.1.4.14"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphoric diester hydrolase activity","termid":"GO:0008081"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0140096","GO:0016787","GO:0016788"],"is_obsolete":false,"name":"[acyl-carrier-protein] phosphodiesterase activity","secondary_identifiers":["MetaCyc:3.1.4.14-RXN","RHEA:20537"],"synonyms":[{"name":"ACP hydrolyase activity","type":"related"},{"name":"ACP phosphodiesterase activity","type":"exact"},{"name":"AcpH","type":"related"},{"name":"[acyl-carrier protein] phosphodiesterase activity","type":"exact"},{"name":"[acyl-carrier-protein] 4'-pantetheine-phosphohydrolase activity","type":"related"},{"name":"acyl-carrier-protein 4'-pantetheine-phosphohydrolase activity","type":"related"},{"name":"acyl-carrier-protein phosphodiesterase activity","type":"related"},{"name":"holo-acyl-carrier-protein 4'-pantetheine-phosphohydrolase activity","type":"related"}],"termid":"GO:0008770"}


id: GO:0052403
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism stops, prevents, or reduces the frequency, rate or extent of symbiont enzyme activity. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation by host of symbiont catalytic activity (obsolete GO:0052403)","synonyms":[{"name":"down regulation by host of symbiont enzyme activity","type":"exact"},{"name":"down regulation by host of symbiont protein function","type":"broad"},{"name":"down-regulation by host of symbiont enzyme activity","type":"exact"},{"name":"down-regulation by host of symbiont protein function","type":"broad"},{"name":"downregulation by host of symbiont enzyme activity","type":"exact"},{"name":"downregulation by host of symbiont protein function","type":"broad"},{"name":"inhibition by host of symbiont enzyme activity","type":"narrow"},{"name":"inhibition by host of symbiont protein function","type":"narrow"},{"name":"inhibition of symbiont enzyme activity","type":"exact"},{"name":"inhibition of symbiont protein function","type":"broad"},{"name":"negative regulation by host of symbiont enzyme activity","type":"exact"},{"name":"negative regulation by host of symbiont molecular function","type":"broad"}],"termid":"GO:0052403"}


id: PBO:0082050
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3'-5' DNA helicase involved in error-free bypass of DNA lesions; binds flap DNA, stimulates activity of Rad27p and Dna2p; prevents crossovers between ectopic sequences by removing substrates for Mus81-Mms4 or Rad1-Rad10 cleavage; homolog of human FANCM Fanconi anemia protein that is involved in stabilizing and remodeling blocked replication forks; member of SF2 DExD/H superfamily of helicases; nonsense or missense mutations in FANCM can make people more likely to get cancer","termid":"PBO:0082050"}


id: PBO:0089732
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial DNA polymerase, gamma subunit Pog1","termid":"PBO:0089732"}


id: PBO:0050042
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major histocompatibility complex, class I, E","termid":"PBO:0050042"}


id: MONDO:0015450
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare congenital abnormality of the heart characterized by the presence of three atria. The right or left atrium is divided into two parts by fibromuscular tissue or a membrane. It may be associated with other heart congenital abnormalities.","definition_xrefs":["NCIT:C84651"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital heart malformation","termid":"MONDO:0019512"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"triatrial heart","secondary_identifiers":["NANDO:2100083","NORD:1007","UMLS:C0009995","ICD9:746.82","MEDGEN:3238","SCTID:55510008","Orphanet:1463","GARD:6194","NANDO:2200263"],"synonyms":[{"name":"Cor Triatriatum","type":"exact"},{"name":"Cor triatriatum","type":"exact"}],"termid":"MONDO:0015450","xrefs":{"Monarch":{"xref_id":"0015450"}}}


id: PBO:0059617
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ATP6 pseudogene 29","termid":"PBO:0059617"}


id: PBO:0073552
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SH3 and multiple ankyrin repeat domains 3","termid":"PBO:0073552"}


id: MONDO:0017636
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hemiparkinsonism-hemiatrophy syndrome is a rare parkinsonian disorder characterized by unilateral body atrophy and slowly progressive, ipsilateral hemiparkinsonian signs (bradykinesia, rigidity, and tremor). Patients typically present with unilateral, action-induced dystonia, in upper or lower limbs, that progresses and becomes bilateral or with tremor which occurs predominantly at rest and progresses to hemiparkinsonism. Scoliosis, scapular winging, raised shoulders, brisk reflexes and extensor plantars are frequently associated.","definition_xrefs":["Orphanet:306669"],"direct_ancestors":[{"relation_name":"is_a","term_name":"parkinsonian disorder","termid":"MONDO:0021095"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hemiparkinsonism-hemiatrophy syndrome","secondary_identifiers":["icd11.foundation:193784690","UMLS:C4545231","MEDGEN:1627807","GARD:21262"],"synonyms":[{"name":"Hp-HA syndrome","type":"exact"}],"termid":"MONDO:0017636","xrefs":{"Monarch":{"xref_id":"0017636"}}}


id: PBO:0050072
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homeobox containing 1","termid":"PBO:0050072"}


id: GO:0035960
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of ergosterol biosynthetic process by modulating the frequency, rate or extent of transcription from an RNA polymerase II promoter.","definition_xrefs":["PMID:16055745","GOC:dgf","PMID:11533229"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of ergosterol biosynthetic process by regulation of transcription from RNA polymerase II promoter (obsolete GO:0035960)","synonyms":[{"name":"regulation of ergosterol anabolism by regulation of transcription from Pol II promoter","type":"exact"},{"name":"regulation of ergosterol anabolism by regulation of transcription from RNA polymerase II promoter","type":"related"},{"name":"regulation of ergosterol biosynthesis by regulation of transcription from Pol II promoter","type":"exact"},{"name":"regulation of ergosterol biosynthesis by regulation of transcription from RNA polymerase II promoter","type":"related"},{"name":"regulation of ergosterol biosynthetic process by regulation of transcription from Pol II promoter","type":"related"},{"name":"regulation of ergosterol formation by regulation of transcription from Pol II promoter","type":"exact"},{"name":"regulation of ergosterol formation by regulation of transcription from RNA polymerase II promoter","type":"related"},{"name":"regulation of ergosterol synthesis by regulation of transcription from Pol II promoter","type":"exact"},{"name":"regulation of ergosterol synthesis by regulation of transcription from RNA polymerase II promoter","type":"related"}],"termid":"GO:0035960"}


id: GO:0009036
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the endonucleolytic cleavage of DNA to give specific double-stranded fragments with terminal 5'-phosphates and 3' hydroxyls. Cleavage is dependent on the presence in the DNA of a specific recognition site; cleavage occurs at or very near this recognition site.","definition_xrefs":["EC:3.1.21.4","PMID:12654995"],"direct_ancestors":[{"relation_name":"is_a","term_name":"restriction endodeoxyribonuclease activity","termid":"GO:0015666"},{"relation_name":"is_a","term_name":"DNA endonuclease activity, producing 5'-phosphomonoesters","termid":"GO:0016888"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0140097"}],"interesting_parent_ids":["GO:0016788","GO:0140097","GO:0003824","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"type II site-specific deoxyribonuclease activity","secondary_identifiers":["MetaCyc:3.1.21.4-RXN"],"synonyms":[{"name":"type II restriction enzyme activity","type":"exact"}],"termid":"GO:0009036"}


id: MONDO:0100356
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A severe form of a genetic disease.","direct_ancestors":[{"relation_name":"is_a","term_name":"classic or non-classic genetic disease presentation","termid":"MONDO:0100355"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"classic presentation","termid":"MONDO:0100356","xrefs":{"Monarch":{"xref_id":"0100356"}}}


id: GO:1902456
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of stomatal opening.","definition_xrefs":["GOC:TermGenie","PMID:23766366"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of stomatal movement","termid":"GO:0010119"},{"relation_name":"regulates","term_name":"stomatal opening","termid":"GO:1990069"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of stomatal opening","termid":"GO:1902456"}


id: PBO:0084595
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Merged open reading frame; does not encode a discrete protein; YJL017W was originally annotated as an independent ORF, but as a result of a sequence change, it was merged with an adjacent ORF into a single reading frame, designated YJL016W","termid":"PBO:0084595"}


id: GO:0044759
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont inhibits or disrupts the normal execution of synaptic transmission, communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse, in its host organism.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host synaptic transmission","termid":"GO:0044758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host synaptic transmission","synonyms":[{"name":"negative regulation by symbiont of host synaptic transmission","type":"exact"}],"termid":"GO:0044759"}


id: GO:0160077
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process by which a single lipid droplet is created from the fusion of two or more lipid droplets.","definition_xrefs":["PMID:34508658","PMID:36477540"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid droplet organization","termid":"GO:0034389"},{"relation_name":"is_a","term_name":"organelle fusion","termid":"GO:0048284"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lipid droplet fusion","termid":"GO:0160077"}


id: GO:0097420
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Intracytoplasmic filamentous structure frequently encountered in preparations immunostained for ubiquitin.","definition_xrefs":["NIF_Subcellular:nlx_subcell_20090103","PMID:18026741"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inclusion body","termid":"GO:0016234"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"skein-like inclusion","termid":"GO:0097420"}


id: PBO:0062733
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 52 subfamily D member 1","termid":"PBO:0062733"}


id: MONDO:0005328
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id: PBO:0061630
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id: GO:0051607
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id: MONDO:0018417
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id: GO:1900644
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id: MONDO:0018735
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id: GO:0050276
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1-amino-1-deoxy-scyllo-inositol + ATP = 1-amino-1-deoxy-scyllo-inositol 4-phosphate + ADP + 2 H+.","definition_xrefs":["EC:2.7.1.65","RHEA:18605"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016301","GO:0016740"],"is_obsolete":false,"name":"scyllo-inosamine 4-kinase activity","secondary_identifiers":["KEGG_REACTION:R03384","MetaCyc:SCYLLO-INOSAMINE-KINASE-RXN"],"synonyms":[{"name":"ATP:1-amino-1-deoxy-scyllo-inositol 4-phosphotransferase activity","type":"related"},{"name":"ATP:inosamine phosphotransferase activity","type":"related"},{"name":"scyllo-inosamine kinase (phosphorylating)","type":"related"},{"name":"scyllo-inosamine kinase activity","type":"exact"}],"termid":"GO:0050276"}


id: PBO:0028992
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_proline_import","termid":"PBO:0028992"}


id: PBO:0085730
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in the regulation of endocytosis; transiently recruited to actin cortical patches in a SLA1-dependent manner after late coat component assembly; GFP-fusion protein localizes to the periphery, cytoplasm, bud, and bud neck","termid":"PBO:0085730"}


id: GO:0140997
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of a phosphate group to a histone H4.","definition_xrefs":["PMID:25303536"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone kinase activity","termid":"GO:0035173"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0016301","GO:0003824","GO:0004672","GO:0003674","GO:0016740","GO:0140096"],"is_obsolete":false,"name":"histone H4 kinase activity","termid":"GO:0140997"}


id: GO:1901335
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of lactone.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catabolic process","termid":"GO:0009056"},{"relation_name":"is_a","term_name":"lactone metabolic process","termid":"GO:1901334"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lactone catabolic process","synonyms":[{"name":"lactone breakdown","type":"exact"},{"name":"lactone catabolism","type":"exact"},{"name":"lactone degradation","type":"exact"}],"termid":"GO:1901335"}


id: PBO:0056655
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit 22","termid":"PBO:0056655"}


id: MONDO:0044339
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any degenerative disorder affecting one or more vertebral disks of the lumbar spine.","definition_xrefs":["NCIT:C27154"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intervertebral disk degenerative disorder","termid":"MONDO:0011385"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lumbar disk degenerative disorder","secondary_identifiers":["SCTID:26538006","MESH:C535531","MEDGEN:57852","UMLS:C0158252"],"synonyms":[{"name":"IDD","type":"broad"},{"name":"degeneration of lumbar intervertebral disc","type":"exact"},{"name":"degeneration of lumbar intervertebral disk","type":"exact"},{"name":"degenerative disc disease","type":"broad"},{"name":"degenerative disc disorder","type":"broad"},{"name":"degenerative disk disease","type":"broad"},{"name":"degenerative disk disorder","type":"broad"},{"name":"intervertebral DISC disease","type":"broad"},{"name":"intervertebral disc degenerative disorder of lumbar region of vertebral column","type":"exact"},{"name":"intervertebral disc disease","type":"broad"},{"name":"intervertebral disc disease, susceptibility to","type":"exact"},{"name":"intervertebral disk degenerative disorder of lumbar region of vertebral column","type":"exact"},{"name":"intervertebral disk disease","type":"broad"},{"name":"intervertebral disk disease, susceptibility to","type":"exact"},{"name":"lumbar Disc Degeneration","type":"exact"},{"name":"lumbar Disc degenerative disease","type":"exact"},{"name":"lumbar Disc degenerative disorder","type":"exact"},{"name":"lumbar disc degeneration, susceptibility to","type":"related"},{"name":"lumbar disc disease","type":"related"},{"name":"lumbar disc disease, susceptibility to","type":"exact"},{"name":"lumbar disc herniation, susceptibility to","type":"related"},{"name":"lumbar disk degeneration, susceptibility to","type":"related"},{"name":"lumbar disk disease","type":"related"},{"name":"lumbar disk disease, susceptibility to","type":"exact"},{"name":"lumbar disk herniation, susceptibility to","type":"related"},{"name":"lumbar region of vertebral column intervertebral disc degenerative disorder","type":"exact"},{"name":"lumbar region of vertebral column intervertebral disk degenerative disorder","type":"exact"}],"termid":"MONDO:0044339","xrefs":{"Monarch":{"xref_id":"0044339"}}}


id: PBO:0034601
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_iron_ion_binding","termid":"PBO:0034601"}


id: PR:O42971
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An anaphase-promoting complex subunit 10 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR12936:SF0","PRO:DNx","OMA:SCHPO03073"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anaphase-promoting complex subunit 10 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1A4.01","secondary_identifiers":["UniProtKB:O42971"],"synonyms":[{"name":"20S cyclosome/APC complex protein apc10 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ANAPC10","type":"exact"}],"termid":"PR:O42971"}


id: MONDO:0020110
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An uncommon congenital abnormality characterized by either lethal complete absence of the lungs or varying degrees of underdevelopment of the lung parenchyma. It may be associated with other congenital abnormalities.","definition_xrefs":["NCIT:C99028"],"direct_ancestors":[{"relation_name":"is_a","term_name":"respiratory system disorder","termid":"MONDO:0005087"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pulmonary agenesis","secondary_identifiers":["MEDGEN:82722","MedDRA:10037322","UMLS:C0265780","icd11.foundation:134836096","MESH:C562992","Orphanet:984","ICD9:748.5","GARD:9119","SCTID:66489009"],"synonyms":[{"name":"congenital absence of lung","type":"exact"},{"name":"congenital lung agenesis","type":"related"},{"name":"unilateral lobar pulmonary agenesis","type":"related"},{"name":"unilateral lung agenesis","type":"related"}],"termid":"MONDO:0020110","xrefs":{"Monarch":{"xref_id":"0020110"}}}


id: GO:0070419
data:
  {"annotated_genes":["SJAG_02527","SJAG_02237","SJAG_04199"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[100303,116704,80460],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032807"}]},"cv_name":"cellular_component","definition":"A protein complex that plays a role in DNA double-strand break repair via nonhomologous end joining. Such complexes typically contain a specialized DNA ligase (e.g. Lig4 in eukaryotes) and one or more proteins that bind to DNA ends.","definition_xrefs":["GOC:mah","PMID:17072889","PMID:17938628"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"},{"relation_name":"is_a","term_name":"DNA repair complex","termid":"GO:1990391"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02237":null,"SJAG_02527":null,"SJAG_04199":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"nonhomologous end joining complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"NHEJ complex","type":"exact"},{"name":"non-homologous end joining complex","type":"exact"}],"termid":"GO:0070419","terms_by_termid":{"GO:0032807":null}}


id: MONDO:0002779
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An extraskeletal chondroma usually arising from the dura.","definition_xrefs":["NCIT:C7001"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system organ benign neoplasm","termid":"MONDO:0000628"},{"relation_name":"is_a","term_name":"soft tissue chondroma","termid":"MONDO:0006423"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"central nervous system chondroma","secondary_identifiers":["MEDGEN:272474","DOID:3813","UMLS:C1333019"],"synonyms":[{"name":"CNS chondroma","type":"exact"},{"name":"CNS osteochondroma","type":"exact"},{"name":"central nervous system chondroma","type":"exact"},{"name":"central nervous system osteochondroma","type":"exact"},{"name":"chondroma of CNS","type":"exact"},{"name":"chondroma of central nervous system","type":"exact"},{"name":"chondroma of the CNS","type":"exact"},{"name":"chondroma of the central nervous system","type":"exact"},{"name":"osteochondroma of CNS","type":"exact"},{"name":"osteochondroma of central nervous system","type":"exact"},{"name":"osteochondroma of the CNS","type":"exact"},{"name":"osteochondroma of the central nervous system","type":"exact"}],"termid":"MONDO:0002779","xrefs":{"Monarch":{"xref_id":"0002779"}}}


id: PBO:0072822
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sterile alpha motif domain containing 15","termid":"PBO:0072822"}


id: MONDO:0017952
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete non-familial rare disease with dilated cardiomyopathy (obsolete MONDO:0017952)","secondary_identifiers":["Orphanet:324767"],"termid":"MONDO:0017952","xrefs":{"Monarch":{"xref_id":"0017952"}}}


id: GO:0015344
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: siderophore-iron(ferrioxamine)(out) + H+(out) = siderophore-iron(ferrioxamine)(in) + H+(in).","definition_xrefs":["TC:2.A.1.16.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"siderophore-iron transmembrane transporter activity","termid":"GO:0015343"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"siderophore uptake transmembrane transporter activity","synonyms":[{"name":"ferrioxamine uptake transmembrane transporter activity","type":"related"},{"name":"siderochrome-iron (ferrioxamine) uptake transporter","type":"narrow"},{"name":"siderophore-iron uptake transmembrane transporter activity","type":"related"}],"termid":"GO:0015344"}


id: GO:1901147
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any mesenchymal cell apoptotic process that is involved in metanephric nephron morphogenesis.","definition_xrefs":["GOC:TermGenie","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesenchymal cell apoptotic process involved in metanephros development","termid":"GO:1900200"},{"relation_name":"is_a","term_name":"mesenchymal cell apoptotic process involved in nephron morphogenesis","termid":"GO:1901145"},{"relation_name":"part_of","term_name":"metanephric nephron morphogenesis","termid":"GO:0072273"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesenchymal cell apoptotic process involved in metanephric nephron morphogenesis","termid":"GO:1901147"}


id: MONDO:0957999
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive non-syndromic intellectual disability","termid":"MONDO:0019502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0037792"}],"interesting_parent_ids":["MONDO:0037792","MONDO:0005066","MONDO:0006025"],"is_obsolete":false,"name":"intellectual developmental disorder, autosomal recessive 80, with variant lissencephaly","secondary_identifiers":["MEDGEN:1850178","OMIM:620653","UMLS:C5882733"],"termid":"MONDO:0957999","xrefs":{"Monarch":{"xref_id":"0957999"}}}


id: GO:0072113
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the head kidney over time, from its formation to the mature structure. The head kidney is a pronephros that consists of fused bilateral lobes located in the anterior part of the kidney. It is analogous to the mammalian bone marrow and the primary site of definitive hematopoiesis.","definition_xrefs":["ZFA:0000669","GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hematopoietic or lymphoid organ development","termid":"GO:0048534"},{"relation_name":"is_a","term_name":"pronephros development","termid":"GO:0048793"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"head kidney development","termid":"GO:0072113"}


id: MONDO:0009690
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any congenital myasthenic syndrome in which the cause of the disease is a mutation in the DOK7 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital muscular dystrophy","termid":"MONDO:0019950"},{"relation_name":"is_a","term_name":"postsynaptic congenital myasthenic syndrome","termid":"MONDO:0020344"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0005336","MONDO:0002320"],"is_obsolete":false,"name":"congenital myasthenic syndrome 10","secondary_identifiers":["GARD:15206","MEDGEN:376880","DOID:0110668","MESH:C563716","OMIM:254300","SCTID:230687001","ICD9:358.00","DOID:0110638","UMLS:C1850792","OMIM:609456"],"synonyms":[{"name":"CMS Ib","type":"related"},{"name":"CMS10","type":"exact"},{"name":"CMS1B","type":"related"},{"name":"Cms Ib","type":"related"},{"name":"Cms Ib, formerly","type":"related"},{"name":"DOK7 congenital myasthenic syndrome","type":"exact"},{"name":"LGM","type":"exact"},{"name":"congenital muscular dystrophy merosin-positive","type":"exact"},{"name":"congenital myasthenic syndrome 10","type":"exact"},{"name":"congenital myasthenic syndrome caused by mutation in DOK7","type":"exact"},{"name":"congenital myasthenic syndrome type 10","type":"exact"},{"name":"congenital myasthenic syndrome type IB","type":"related"},{"name":"congenital myasthenic syndrome type IB, formerly","type":"related"},{"name":"familial limb-girdle myasthenia","type":"exact"},{"name":"muscular dystrophy, congenital, merosin-POSITIVE","type":"related"},{"name":"myasthenia, limb-girdle, familial","type":"related"},{"name":"myasthenia, limb-girdle, familial, formerly","type":"related"},{"name":"myasthenic myopathy","type":"related"},{"name":"myasthenic myopathy, formerly","type":"related"},{"name":"myasthenic syndrome, congenital, 10","type":"related"},{"name":"myasthenic syndrome, congenital, type 10","type":"exact"}],"termid":"MONDO:0009690","xrefs":{"Monarch":{"xref_id":"0009690"}}}


id: PBO:0070466
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L5 pseudogene 1","termid":"PBO:0070466"}


id: PBO:0091560
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial Morphology and Distribution","termid":"PBO:0091560"}


id: MOD:00546
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes two (18)O atom for the two (16)O atoms of an alpha-carboxyl (1-carboxyl) group.","definition_xrefs":["Unimod:193","OMSSA:88","PubMed:11467524"],"direct_ancestors":[{"relation_name":"is_a","term_name":"(18)O disubstituted residue","termid":"MOD:00847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"(18)O label at both C-terminal oxygens","synonyms":[{"name":"Label:18O(2)","type":"related"},{"name":"O18 label at both C-terminal oxygens","type":"related"},{"name":"ctermpepdio18","type":"exact"}],"termid":"MOD:00546"}


id: PBO:0063053
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"presequence translocase associated motor 16","termid":"PBO:0063053"}


id: PBO:0088385
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAD-dependent oxidoreductase involved in late endosome to Golgi transport","termid":"PBO:0088385"}


id: MONDO:0017858
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An acute myeloid leukemia characterized by a predominant immature erythroid population. There are two subtypes recognized: erythroleukemia and pure erythroid leukemia. (WHO, 2001)","definition_xrefs":["NCIT:C8923"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute myeloid leukemia by FAB classification","termid":"MONDO:0015667"},{"relation_name":"is_a","term_name":"erythroid neoplasm","termid":"MONDO:0020703"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"acute erythroid leukemia","secondary_identifiers":["SCTID:93451002","ICD9:205.80","UMLS:C0023440","ICD9:207.00","DOID:0080780","GARD:9620","MESH:D004915","Orphanet:318","icd11.foundation:631263622","EFO:0000218","icd11.foundation:538743484","ICDO:9840/3","MEDGEN:7316","NANDO:2200010"],"synonyms":[{"name":"AEL","type":"exact"},{"name":"AML M6","type":"exact"},{"name":"AML-M6","type":"related"},{"name":"Di Guglielmo syndrome","type":"related"},{"name":"Di Guglielmo's syndrome","type":"related"},{"name":"Erythroleukemia","type":"related"},{"name":"FAB M6","type":"exact"},{"name":"M6 acute myeloid leukaemia","type":"exact"},{"name":"M6 acute myeloid leukemia","type":"exact"},{"name":"acute erythroblastic leukaemia","type":"exact"},{"name":"acute erythroblastic leukemia","type":"exact"},{"name":"acute erythroid leukemia","type":"exact"},{"name":"acute erythroleukemia","type":"related"},{"name":"acute erythroleukemia M6a subtype","type":"related"},{"name":"acute erythroleukemia M6b subtype","type":"related"},{"name":"acute myeloid leukaemia FAB-M6","type":"related"},{"name":"acute myeloid leukaemia M6","type":"exact"},{"name":"acute myeloid leukemia FAB-M6","type":"related"},{"name":"acute myeloid leukemia M6","type":"exact"},{"name":"erythroblastic leukaemia","type":"exact"},{"name":"erythroblastic leukemia","type":"exact"},{"name":"leukemia, erythroid, malignant","type":"exact"}],"termid":"MONDO:0017858","xrefs":{"Monarch":{"xref_id":"0017858"}}}


id: GO:0051121
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving hepoxilins, a class of bioactive icosanoids with roles in the regulation of cell physiology.","definition_xrefs":["PMID:15123652"],"direct_ancestors":[{"relation_name":"is_a","term_name":"long-chain fatty acid metabolic process","termid":"GO:0001676"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006629"],"is_obsolete":false,"name":"hepoxilin metabolic process","secondary_identifiers":["Reactome:R-HSA-2142696"],"synonyms":[{"name":"hepoxilin metabolism","type":"exact"}],"termid":"GO:0051121"}


id: GO:0042809
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a nuclear vitamin D receptor, a nuclear receptor that mediates the action of vitamin D by binding DNA and controlling the transcription of hormone-sensitive genes.","definition_xrefs":["PMID:12637589","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear receptor binding","termid":"GO:0016922"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"nuclear vitamin D receptor binding","synonyms":[{"name":"VDR binding","type":"exact"},{"name":"calciferol receptor binding","type":"narrow"},{"name":"vitamin D receptor binding","type":"broad"}],"termid":"GO:0042809"}


id: PBO:0062782
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 56 subfamily B member 4","termid":"PBO:0062782"}


id: GO:1901480
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of oleate from one side of a membrane to the other.","definition_xrefs":["GOC:TermGenie","PMID:19493158"],"direct_ancestors":[{"relation_name":"is_a","term_name":"long-chain fatty acid transmembrane transporter activity","termid":"GO:0005324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"oleate transmembrane transporter activity","synonyms":[{"name":"oleate transporter activity","type":"related"}],"termid":"GO:1901480"}


id: GO:0015095
data:
  {"annotated_genes":["SJAG_01639","SJAG_04111","SJAG_03516","SJAG_02484","SJAG_02578","SJAG_00211"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[56948,70573,74821,75862,77698,117357],"is_not":false,"summary":null,"term":"GO:0015095"}]},"cv_name":"molecular_function","definition":"Enables the transfer of magnesium (Mg) ions from one side of a membrane to the other.","definition_xrefs":["GOC:dgf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metal ion transmembrane transporter activity","termid":"GO:0046873"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00211":null,"SJAG_01639":null,"SJAG_02484":null,"SJAG_02578":null,"SJAG_03516":null,"SJAG_04111":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"magnesium ion transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-442661","Reactome:R-HSA-5336466","MetaCyc:TRANS-RXN-141","Reactome:R-HSA-5336453","Reactome:R-HSA-5336454","Reactome:R-HSA-5339538","Reactome:R-HSA-5339528"],"termid":"GO:0015095","terms_by_termid":{"GO:0015095":null}}


id: GO:1900471
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of inositol biosynthetic process by stopping, preventing, or reducing the frequency, rate or extent of transcription from an RNA polymerase II promoter.","definition_xrefs":["PMID:8614637","GOC:TermGenie","PMID:8056324","GOC:dgf"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of inositol biosynthetic process by negative regulation of transcription from RNA polymerase II promoter (obsolete GO:1900471)","synonyms":[{"name":"negative regulation of inositol anabolism by negative regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"negative regulation of inositol biosynthesis by negative regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"negative regulation of inositol formation by negative regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"negative regulation of inositol synthesis by negative regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"negative regulation of myo-inositol biosynthesis by negative regulation of transcription from RNA polymerase II promoter","type":"narrow"},{"name":"negative regulation of myo-inositol biosynthetic process by negative regulation of transcription from RNA polymerase II promoter","type":"narrow"},{"name":"negative regulation of vitamin Bh biosynthesis by negative regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"negative regulation of vitamin Bh biosynthetic process by negative regulation of transcription from RNA polymerase II promoter","type":"exact"}],"termid":"GO:1900471"}


id: GO:0016093
data:
  {"annotated_genes":["SJAG_05219","SJAG_04954","SJAG_02163","SJAG_00554"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[100373,74847,72347],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019408"},{"annotations":[63690],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019348"},{"annotations":[61727],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016095"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving polyprenols, prenols with more than 4 isoprenoid residues, which may be all-trans, or a mixture of cis and trans.","definition_xrefs":["PMID:11108713"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alcohol metabolic process","termid":"GO:0006066"},{"relation_name":"is_a","term_name":"isoprenoid metabolic process","termid":"GO:0006720"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00554":null,"SJAG_02163":null,"SJAG_04954":null,"SJAG_05219":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"polyprenol metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"synonyms":[{"name":"polyprenol metabolism","type":"exact"}],"termid":"GO:0016093","terms_by_termid":{"GO:0016095":null,"GO:0019348":null,"GO:0019408":null}}


id: MONDO:0012780
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"celiac disease","termid":"MONDO:0005130"},{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"celiac disease, susceptibility to, 11","secondary_identifiers":["OMIM:612009","UMLS:C2677603","MEDGEN:393782"],"synonyms":[{"name":"CELIAC11","type":"exact"},{"name":"celiac disease, susceptibility to, 11","type":"exact"},{"name":"gluten-sensitive enteropathy, susceptibility to, 11","type":"related"}],"termid":"MONDO:0012780","xrefs":{"Monarch":{"xref_id":"0012780"}}}


id: MONDO:0012520
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Type A insulin-resistance syndrome belongs to the group of extreme insulin-resistance syndromes (which includes leprechaunism, the lipodystrophies, Rabson-Mendenhall syndrome and type B insulin resistance syndrome) and is characterized by the triad of hyperinsulinemia, acanthosis nigricans (skin lesions associated with insulin resistance), and signs of hyperandrogenism in females without lipodystrophy and who are not overweight.","definition_xrefs":["Orphanet:2297"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"diabetes mellitus","termid":"MONDO:0005015"},{"relation_name":"is_a","term_name":"endocrine pancreas disorder","termid":"MONDO:0001933"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"insulin-resistance syndrome type A","secondary_identifiers":["icd11.foundation:343459534","MEDGEN:501111","MESH:C562710","NCIT:C131836","OMIM:610549","UMLS:C0342278","GARD:3008"],"synonyms":[{"name":"Iran, type a","type":"related"},{"name":"diabetes mellitus, insulin-resistant, with acanthosis nigricans","type":"related"},{"name":"diabetes mellitus, insulin-resistant, with acanthosis nigricans, type a","type":"related"},{"name":"insulin receptor, defect in, with insulin-resistant diabetes mellitus and acanthosis nigricans","type":"related"},{"name":"insulin resistant diabetes mellitus with acanthosis nigricans and hyperandrogenism","type":"exact"},{"name":"insulin-resistant acanthosis nigricans, type A","type":"related"},{"name":"type A insulin resistance syndrome","type":"exact"}],"termid":"MONDO:0012520","xrefs":{"Monarch":{"xref_id":"0012520"}}}


id: PBO:0057785
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3065","termid":"PBO:0057785"}


id: SO:0001470
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A match against an UST sequence.","definition_xrefs":["SO:nlw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"expressed_sequence_match","termid":"SO:0000102"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UST_match","synonyms":[{"name":"UST match","type":"exact"}],"termid":"SO:0001470"}


id: PBO:0065816
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB4A antisense RNA 1","termid":"PBO:0065816"}


id: PBO:0075635
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small proline rich protein 2E","termid":"PBO:0075635"}


id: PBO:0090875
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane ferric-chelate reductase","termid":"PBO:0090875"}


id: PBO:0081453
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 320","termid":"PBO:0081453"}


id: PATO:0000629
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A positional quality inhering in a bearer by virtue of the bearer's having mistakenly taken course, way, or passage; ill-routed.","definition_xrefs":["NDI:NDI"],"direct_ancestors":[{"relation_name":"is_a","term_name":"position","termid":"PATO:0000140"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"misrouted","termid":"PATO:0000629"}


id: PBO:0070436
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rabphilin 3A","termid":"PBO:0070436"}


id: PBO:0087168
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase III subunit C53","termid":"PBO:0087168"}


id: MONDO:0859187
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with hypotonia and brain abnormalities","secondary_identifiers":["UMLS:C5561977","MEDGEN:1794187","OMIM:619512"],"termid":"MONDO:0859187","xrefs":{"Monarch":{"xref_id":"0859187"}}}


id: MONDO:0023868
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Melanoma-associated retinopathy (MAR) is a rare autoimmune condition that occurs in some people with melanoma (a type of skin cancer) and can affect the vision.","definition_xrefs":["GARD:0012041"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinal disorder","termid":"MONDO:0005283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"melanoma associated retinopathy","secondary_identifiers":["icd11.foundation:2011212045","MEDGEN:452708","SCTID:312941005","GARD:12041","UMLS:C0730308"],"synonyms":[{"name":"Melanoma Associated Retinopathy","type":"related"},{"name":"Melanoma associated retinopathy","type":"related"},{"name":"Melanoma-Associated Retinopathies","type":"related"},{"name":"Melanoma-Associated Retinopathy","type":"related"},{"name":"Melanoma-associated retinopathy","type":"related"},{"name":"Retinopathies, Melanoma-Associated","type":"related"},{"name":"Retinopathy, Melanoma-Associated","type":"related"}],"termid":"MONDO:0023868","xrefs":{"Monarch":{"xref_id":"0023868"}}}


