# terms

id: FYPO:0001891
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in late meiosis in which the amount of RNA transcribed from middle meiotic genes measured in a cell is higher than normal. Middle meiotic genes are normally transcribed during meiotic nuclear division.","definition_xrefs":["PomBase:mah","PomBase:al","PMID:22558440"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA level during meiotic cell cycle","termid":"FYPO:0005120"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0006551","FYPO:0001985"],"is_obsolete":false,"name":"increased level of middle meiotic gene mRNA during late meiosis","synonyms":[{"name":"increased RNA level of middle meiotic genes during late meiosis","type":"exact"},{"name":"increased level of middle meiosis gene mRNA during late meiosis","type":"exact"},{"name":"increased level of middle meiotic gene RNA during late meiosis","type":"exact"},{"name":"increased level of middle meiotic gene RNA during late meiotic nuclear division","type":"exact"},{"name":"increased level of middle meiotic gene transcripts during late meiosis","type":"exact"}],"termid":"FYPO:0001891"}


id: GO:0052886
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 9,9'-di-cis-zeta-carotene + a quinone = 7,9,9'-tri-cis-neurosporene + a quinol.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 9,9'-dicis-carotene:quinone oxidoreductase activity (obsolete GO:0052886)","termid":"GO:0052886"}


id: GO:0085002
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. An interaction with the host organism mediated by a symbiont secreted substance released by specialized structures generated in either organisms as a result of the symbiotic interaction. The term host is used for the larger (macro) of the two members of a symbiosis.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete interaction with host mediated by secreted substance released by symbiont from symbiotic structure (obsolete GO:0085002)","termid":"GO:0085002"}


id: SO:0001915
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region defined by a cluster of experimentally determined transcription starting sites.","definition_xrefs":["PMID:21372179","SO:andrewgibson","PMID:19624849"],"direct_ancestors":[{"relation_name":"is_a","term_name":"experimental_feature","termid":"SO:0001410"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription_start_cluster","synonyms":[{"name":"TSC","type":"exact"},{"name":"TSS cluster","type":"exact"},{"name":"transcriptional initiation cluster","type":"exact"},{"name":"transcriptional start site cluster","type":"exact"}],"termid":"SO:0001915"}


id: PBO:0071119
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 121","termid":"PBO:0071119"}


id: PBO:0031809
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-cell_cycle_arrest_at_mitotic_START","termid":"PBO:0031809"}


id: PBO:0041830
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CASC3 exon junction complex subunit","termid":"PBO:0041830"}


id: PBO:0064591
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POTE ankyrin domain family member J","termid":"PBO:0064591"}


id: PBO:0078354
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Glu (anticodon TTC) 1-2","termid":"PBO:0078354"}


id: PBO:0072570
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonucleotide reductase catalytic subunit M1","termid":"PBO:0072570"}


id: MONDO:1011462
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Alzheimer disease that occurs in domestic cat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Alzheimer disease, non-human animal","termid":"MONDO:1011443"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alzheimer disease, domestic cat","secondary_identifiers":["OMIA:000033-9685"],"termid":"MONDO:1011462","xrefs":{"Monarch":{"xref_id":"1011462"}}}


id: PBO:0079594
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 D N-terminal like (pseudogene)","termid":"PBO:0079594"}


id: PBO:0056117
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LYR motif containing 2","termid":"PBO:0056117"}


id: MONDO:0700083
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Chromosomal disorder in which (part or full) chromosome 21 has been exchange with another chromosome, resulting in the presence of a third copy of (part or full) chromosome 21 genetic material. A reciprocal translocation is a chromosome abnormality caused by exchange of parts between non-homologous chromosomes.","definition_xrefs":["PMID:134161","PMID:29956287"],"direct_ancestors":[{"relation_name":"is_a","term_name":"translocation Down syndrome","termid":"MONDO:0700128"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"reciprocal translocation down syndrome","termid":"MONDO:0700083","xrefs":{"Monarch":{"xref_id":"0700083"}}}


id: GO:0047336
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2'-deoxy-5-methyl-5'-cytidylate + ATP = 5-methyldeoxycytidine diphosphate + ADP + H+.","definition_xrefs":["EC:2.7.4.19","RHEA:11396"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, phosphate group as acceptor","termid":"GO:0016776"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"}],"interesting_parent_ids":["GO:0016301","GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"5-methyldeoxycytidine-5'-phosphate kinase activity","secondary_identifiers":["MetaCyc:2.7.4.19-RXN","KEGG_REACTION:R04235"],"synonyms":[{"name":"ATP:5-methyldeoxycytidine-5'-phosphate phosphotransferase activity","type":"related"}],"termid":"GO:0047336"}


id: FYPO:0005772
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which histone H2A phosphorylation occurs to a greater extent than normal at tRNA genes. All histone H2A phosphorylation may be affected, or phosphorylation of specific sites on histone H2A may be increased.","definition_xrefs":["PMID:27611590","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone H2A phosphorylation during vegetative growth","termid":"FYPO:0002596"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0002274","FYPO:0002494"],"is_obsolete":false,"name":"increased histone H2A phosphorylation at tRNA genes during vegetative growth","synonyms":[{"name":"increased histone H2A phosphorylation at tRNA genes during mitotic cell cycle","type":"related"},{"name":"increased histone H2A phosphorylation at transfer RNA genes during vegetative growth","type":"exact"}],"termid":"FYPO:0005772"}


id: GO:0016827
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of any acid carbon-phosphorus bond.","definition_xrefs":["EC:3.11.-.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity","termid":"GO:0016787"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"hydrolase activity, acting on acid carbon-phosphorus bonds","termid":"GO:0016827"}


id: PBO:0072144
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S15a pseudogene 21","termid":"PBO:0072144"}


id: PBO:0040258
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy related 12 pseudogene 1","termid":"PBO:0040258"}


id: GO:0090391
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly of a granum. A granum is a distinct stack of lamellae seen within chloroplasts.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component assembly","termid":"GO:0022607"},{"relation_name":"part_of","term_name":"chloroplast organization","termid":"GO:0009658"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"granum assembly","synonyms":[{"name":"grana formation","type":"exact"}],"termid":"GO:0090391"}


id: PATO:0001375
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A ploidy quality inhering in a bearer by virtue of the bearer's containing a single set of homologous chromosomes.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Haploid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"euploid","termid":"PATO:0001393"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"haploid","termid":"PATO:0001375"}


id: MONDO:0005884
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infection with flukes of the genus Opisthorchis.","definition_xrefs":["MESH:D009889"],"direct_ancestors":[{"relation_name":"is_a","term_name":"helminthiasis","termid":"MONDO:0004664"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"opisthorchiasis","secondary_identifiers":["MEDGEN:10453","icd11.foundation:1401769984","ICD9:121.0","SCTID:1059007","DOID:13768","UMLS:C0029106","ICD10CM:B66.0","EFO:0007404"],"synonyms":[{"name":"infection by Opisthorchis","type":"exact"},{"name":"infection due to Opisthorchis (felineus)(viverrini)","type":"related"},{"name":"infection due to cat liver fluke","type":"related"}],"termid":"MONDO:0005884","xrefs":{"Monarch":{"xref_id":"0005884"}}}


id: PBO:0000330
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ATP synthase complex assembly protein Atp25 (predicted)","termid":"PBO:0000330"}


id: PBO:0083538
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified ORF YBR175W; null mutant is viable and sporulation defective","termid":"PBO:0083538"}


id: SO:0001586
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant whereby at least one base of a codon is changed resulting in a codon that encodes for an amino acid with different biochemical properties.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"missense_variant","termid":"SO:0001583"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non_conservative_missense_variant","synonyms":[{"name":"non conservative missense codon","type":"exact"},{"name":"non conservative missense variant","type":"exact"}],"termid":"SO:0001586"}


id: GO:0002293
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an antigenically naive alpha-beta T cell acquires the specialized features of an effector, regulatory, or memory T cell during an immune response. Effector T cells include cells which provide T cell help or exhibit cytotoxicity towards other cells.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-beta T cell activation involved in immune response","termid":"GO:0002287"},{"relation_name":"is_a","term_name":"T cell differentiation involved in immune response","termid":"GO:0002292"},{"relation_name":"is_a","term_name":"alpha-beta T cell differentiation","termid":"GO:0046632"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"alpha-beta T cell differentiation involved in immune response","synonyms":[{"name":"alpha-beta T cell development involved in immune response","type":"related"},{"name":"alpha-beta T cell differentiation during immune response","type":"related"},{"name":"alpha-beta T lymphocyte differentiation during immune response","type":"related"},{"name":"alpha-beta T-cell differentiation during immune response","type":"related"},{"name":"alpha-beta T-lymphocyte differentiation during immune response","type":"related"}],"termid":"GO:0002293"}


id: PBO:0054086
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1438","termid":"PBO:0054086"}


id: PBO:0001311
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human CLN3","termid":"PBO:0001311"}


id: GO:0023066
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which a signal is conveyed via the vascular system.","definition_xrefs":["GOC:mtg_signal"],"gene_count":0,"genotype_count":0,"name":"obsolete signal transmission via vascular system (obsolete GO:0023066)","synonyms":[{"name":"signal transmission via vascular system","type":"exact"}],"termid":"GO:0023066"}


id: GO:0002636
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of germinal center formation.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of germinal center formation","termid":"GO:0002634"},{"relation_name":"is_a","term_name":"positive regulation of adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains","termid":"GO:0002824"},{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"positively_regulates","term_name":"germinal center formation","termid":"GO:0002467"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of germinal center formation","synonyms":[{"name":"activation of germinal center formation","type":"narrow"},{"name":"stimulation of germinal center formation","type":"narrow"},{"name":"up regulation of germinal center formation","type":"exact"},{"name":"up-regulation of germinal center formation","type":"exact"},{"name":"upregulation of germinal center formation","type":"exact"}],"termid":"GO:0002636"}


id: GO:0016977
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the endohydrolysis of beta-1,4-linkages between N-acetyl-D-glucosamine and D-glucosamine residues in a partly acetylated chitosan.","definition_xrefs":["EC:3.2.1.132"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0003674","GO:0016798"],"is_obsolete":false,"name":"chitosanase activity","secondary_identifiers":["MetaCyc:3.2.1.132-RXN"],"synonyms":[{"name":"chitosan N-acetylglucosaminohydrolase activity","type":"related"}],"termid":"GO:0016977"}


id: PBO:0048606
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GRB10 interacting GYF protein 2","termid":"PBO:0048606"}


id: PBO:0078112
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha variable 1-2","termid":"PBO:0078112"}


id: PBO:0060949
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear factor I C","termid":"PBO:0060949"}


id: PBO:0061031
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ninjurin 2","termid":"PBO:0061031"}


id: PBO:0050826
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydroxypyruvate isomerase (putative)","termid":"PBO:0050826"}


id: PR:Q9P7G6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tos4 gene.","definition_xrefs":["UniProtKB:Q9P7G6","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor P14E8.02 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAP14E8.02","synonyms":[{"name":"Spom972h-tos4","type":"exact"}],"termid":"PR:Q9P7G6"}


id: MONDO:0021505
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign neoplasm that involves the endocardium.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neoplasm of endocardium","termid":"MONDO:0021378"},{"relation_name":"is_a","term_name":"benign neoplasm of heart","termid":"MONDO:0021450"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"benign neoplasm of endocardium","secondary_identifiers":["MEDGEN:83863","UMLS:C0347254","NCIT:C4608","SCTID:92083007","icd11.foundation:1776419379"],"synonyms":[{"name":"benign endocardial neoplasm","type":"exact"},{"name":"benign endocardial tumor","type":"exact"},{"name":"benign endocardial tumour","type":"exact"},{"name":"benign neoplasm of the endocardium","type":"exact"},{"name":"benign tumor of endocardium","type":"exact"},{"name":"benign tumor of the endocardium","type":"exact"},{"name":"benign tumour of endocardium","type":"exact"},{"name":"benign tumour of the endocardium","type":"exact"},{"name":"endocardium benign neoplasm","type":"exact"}],"termid":"MONDO:0021505","xrefs":{"Monarch":{"xref_id":"0021505"}}}


id: PBO:0064290
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasminogen like B1","termid":"PBO:0064290"}


id: PBO:0028440
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-growth_auxotrophic_for_sulfur-containing_amino_acid","termid":"PBO:0028440"}


id: SO:0002109
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A processed_pseudogene overlapped by locus-specific evidence of transcription.","definition_xrefs":["GENCODE:http://www.gencodegenes.org/gencode_biotypes.html"],"direct_ancestors":[{"relation_name":"is_a","term_name":"processed_pseudogene","termid":"SO:0000043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcribed_processed_pseudogene","synonyms":[{"name":"transcribed processed pseudogene","type":"exact"}],"termid":"SO:0002109"}


id: PBO:0063559
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pellino E3 ubiquitin protein ligase family member 3","termid":"PBO:0063559"}


id: PBO:0029314
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_pre-autophagosomal_structure","termid":"PBO:0029314"}


id: PBO:0043643
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COP9 signalosome subunit 5","termid":"PBO:0043643"}


id: GO:0102610
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (+)-secoisolariciresinol + UDP-alpha-D-glucose = (+)-secoisolariciresinol monoglucoside + UDP + H+.","definition_xrefs":["GOC:pz","PMID:24678929"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0016757","GO:0003824"],"is_obsolete":false,"name":"(+)-secoisolariciresinol glucosyltransferase activity","secondary_identifiers":["MetaCyc:RXN-15442"],"termid":"GO:0102610"}


id: GO:0002291
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The change in morphology and behavior of a mature or immature T cell resulting from exposure to an antigen for which its T cell receptor is specific bound to an MHC molecule on an antigen presenting cell, leading to the initiation or perpetuation of an immune response.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T cell activation involved in immune response","termid":"GO:0002286"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"T cell activation via T cell receptor contact with antigen bound to MHC molecule on antigen presenting cell","synonyms":[{"name":"T lymphocyte activation via T cell receptor contact with antigen bound to MHC molecule on antigen presenting cell","type":"exact"},{"name":"T-cell activation via T cell receptor contact with antigen bound to MHC molecule on antigen presenting cell","type":"exact"},{"name":"T-lymphocyte activation via T cell receptor contact with antigen bound to MHC molecule on antigen presenting cell","type":"exact"}],"termid":"GO:0002291"}


id: GO:0051997
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-hydroxy-2-oxo-4-ureido-2,5-dihydro-1H imidazole-5-carboxylate + H+ = S-allantoin + CO2.","definition_xrefs":["MetaCyc:RXN-6201"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase activity","secondary_identifiers":["EC:4.1.1.97","KEGG_REACTION:R06604","RHEA:26301"],"synonyms":[{"name":"4-(carbamoylamino)-5-hydroxy-2-oxo-2,5-dihydro-1H-imidazole-5-carboxylate decarboxylase activity","type":"exact"},{"name":"OHCU decarboxylase activity","type":"exact"}],"termid":"GO:0051997"}


id: PBO:0058549
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6128","termid":"PBO:0058549"}


id: PBO:0074638
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 31","termid":"PBO:0074638"}


id: CHEBI:16811
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methionine","termid":"CHEBI:16811"}


id: FYPO:0007278
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to euchromatin is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PMID:17289569","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to chromatin during vegetative growth","termid":"FYPO:0001509"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000138","FYPO:0000002","FYPO:0001312","FYPO:0000257"],"is_obsolete":false,"name":"normal protein localization to euchromatin","synonyms":[{"name":"normal protein localisation to euchromatin","type":"exact"},{"name":"normal protein localization to euchromatin during mitotic cell cycle","type":"related"},{"name":"normal protein localization to euchromatin during vegetative growth","type":"exact"}],"termid":"FYPO:0007278"}


id: MONDO:0045057
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disorder characterized by confusion; inattentiveness; disorientation; illusions; hallucinations; agitation; and in some instances autonomic nervous system overactivity. It may result from toxic/metabolic conditions or structural brain lesions. (From Adams et al., Principles of Neurology, 6th ed, pp411-2)","definition_xrefs":["MESH:D003693"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cognitive disorder","termid":"MONDO:0002039"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002039"}],"interesting_parent_ids":["MONDO:0002039"],"is_obsolete":false,"name":"delirium","secondary_identifiers":["ICD9:293.0","SCTID:2776000","UMLS:C0011206","EFO:0009267","icd11.foundation:897917531","MEDGEN:41445","NCIT:C2981"],"synonyms":[{"name":"OBS syndrome","type":"related"},{"name":"organic brain syndrome","type":"related"}],"termid":"MONDO:0045057","xrefs":{"Monarch":{"xref_id":"0045057"}}}


id: GO:2001096
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a cellotrioseacetate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trisaccharide transport","termid":"GO:2001088"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"cellotriose transport","termid":"GO:2001096"}


id: MONDO:0010937
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isoproterenol-mediated vasodilatation","secondary_identifiers":["MEDGEN:331475","OMIM:600801","UMLS:C1833276"],"synonyms":[{"name":"isoproterenol-mediated vasodilatation","type":"exact"}],"termid":"MONDO:0010937","xrefs":{"Monarch":{"xref_id":"0010937"}}}


id: GO:0042806
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to fucose, the pentose 6-deoxygalactose.","definition_xrefs":["ISBN:0582227089"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monosaccharide binding","termid":"GO:0048029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"fucose binding","termid":"GO:0042806"}


id: PBO:0075477
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPATA31 subfamily A member 5","termid":"PBO:0075477"}


id: PBO:0087961
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transmembrane protein with a role in cell wall polymer composition; localizes on inner surface of plasma membrane at bud and in daughter cell; SKG1 has a paralog, AIM20, that arose from the whole genome duplication","termid":"PBO:0087961"}


id: GO:0006018
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of deoxyribose 1-phosphate, the phosphorylated sugar 1-phospho-2-deoxyribose.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-deoxyribose 1-phosphate metabolic process","termid":"GO:0046384"},{"relation_name":"is_a","term_name":"deoxyribose phosphate catabolic process","termid":"GO:0046386"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"2-deoxyribose 1-phosphate catabolic process","synonyms":[{"name":"2-deoxyribose 1-phosphate breakdown","type":"exact"},{"name":"2-deoxyribose 1-phosphate catabolism","type":"exact"},{"name":"2-deoxyribose 1-phosphate degradation","type":"exact"},{"name":"deoxyribose 1-phosphate catabolic process","type":"exact"}],"termid":"GO:0006018"}


id: PBO:0071111
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 113","termid":"PBO:0071111"}


id: PBO:0031478
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_actin_cortical_patch","termid":"PBO:0031478"}


id: FYPO:0004820
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the number of DNA replication pause sites in ribosomal DNA at which the protein Rad52 (also called Rad22) accumulates is greater than normal.","definition_xrefs":["PomBase:mah","PMID:25417108"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased number of Rad52 foci during vegetative growth","termid":"FYPO:0000972"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"increased number of Rad52 foci at rDNA replication pause sites","synonyms":[{"name":"increased number of Rad22 foci at rDNA replication fork barrier","type":"exact"},{"name":"increased number of Rad22 foci at rDNA replication pause sites","type":"exact"},{"name":"increased number of Rad52 foci at rDNA replication pause sites during mitotic cell cycle","type":"related"},{"name":"increased number of Rad52 foci at rDNA replication pause sites during vegetative growth","type":"exact"}],"termid":"FYPO:0004820"}


id: PR:Q9P7H8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A proteasome-associated protein ECM29 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome component ecm29 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1782.01","secondary_identifiers":["UniProtKB:Q9P7H8"],"synonyms":[{"name":"SPAC1782.01","type":"related"},{"name":"Spom972h-ECM29","type":"exact"}],"termid":"PR:Q9P7H8"}


id: PBO:0077142
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tight junction protein 2","termid":"PBO:0077142"}


id: PBO:0041076
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BRCA1 interacting helicase 1","termid":"PBO:0041076"}


id: PBO:0080320
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 84 pseudogene","termid":"PBO:0080320"}


id: GO:0060201
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer surrounding a clathrin-sculpted acetylcholine transport vesicle.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transport vesicle membrane","termid":"GO:0030658"},{"relation_name":"is_a","term_name":"clathrin-coated vesicle membrane","termid":"GO:0030665"},{"relation_name":"part_of","term_name":"clathrin-sculpted acetylcholine transport vesicle","termid":"GO:0060200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0031410","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"clathrin-sculpted acetylcholine transport vesicle membrane","synonyms":[{"name":"clathrin sculpted acetylcholine constitutive secretory pathway transport vesicle membrane","type":"exact"},{"name":"clathrin sculpted acetylcholine transport vesicle membrane","type":"exact"}],"termid":"GO:0060201"}


id: PBO:0046984
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 86 member H, pseudogene","termid":"PBO:0046984"}


id: GO:2000193
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of fatty acid transport.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of lipid transport","termid":"GO:0032370"},{"relation_name":"is_a","term_name":"positive regulation of organic acid transport","termid":"GO:0032892"},{"relation_name":"is_a","term_name":"regulation of fatty acid transport","termid":"GO:2000191"},{"relation_name":"positively_regulates","term_name":"fatty acid transport","termid":"GO:0015908"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of fatty acid transport","termid":"GO:2000193"}


id: FYPO:0001734
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which duplicated mitotic spindle pole bodies do not separate.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic spindle pole body separation","termid":"FYPO:0001733"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000641","FYPO:0000054","FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0000631","FYPO:0000337"],"is_obsolete":false,"name":"abolished mitotic spindle pole body separation","synonyms":[{"name":"abolished spindle pole body separation during mitotic cell cycle","type":"related"},{"name":"clustered mitotic spindle pole bodies","type":"related"},{"name":"mitotic SPB separation abolished","type":"exact"},{"name":"mitotic spindle pole body separation abolished","type":"exact"},{"name":"spindle pole body separation abolished during vegetative growth","type":"exact"}],"termid":"FYPO:0001734"}


id: PBO:0061462
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"negative regulator of antiviral response","termid":"PBO:0061462"}


id: GO:0071175
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of the intracellular domain of Notch1 (ICN1), the DNA-binding transcription factor RBP-Jkappa, and the transcriptional coactivator Mastermind-like-2 (MAML2); the complex is involved in transcriptional activation in response to Notch-mediated signaling.","definition_xrefs":["PMID:12370315"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005634","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"MAML2-RBP-Jkappa-ICN1 complex","synonyms":[{"name":"MAML2-RBP-Jkappa-Notch1 complex","type":"exact"}],"termid":"GO:0071175"}


id: GO:0016910
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete SAP kinase 3 activity (obsolete GO:0016910)","synonyms":[{"name":"SAP kinase 3 activity","type":"exact"},{"name":"SAPK3","type":"exact"}],"termid":"GO:0016910"}


id: PBO:0030273
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_negative_regulation_of_mitotic_DNA_replication_initiation_resulting_in_complete_rereplication","termid":"PBO:0030273"}


id: MONDO:0001370
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Fluid collection within the pericardial sac, usually due to inflammation.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pericardium disorder","termid":"MONDO:0000474"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"pericardial effusion","secondary_identifiers":["UMLS:C0031039","DOID:118","MEDGEN:10653","NCIT:C3319","SCTID:373945007","HP:0001698","icd11.foundation:2002014072","MESH:D010490"],"synonyms":[{"name":"fluid, pericardial","type":"exact"},{"name":"pericardial effusion","type":"exact"},{"name":"pericardial effusion (disease)","type":"exact"},{"name":"pericardial fluid","type":"exact"}],"termid":"MONDO:0001370","xrefs":{"Monarch":{"xref_id":"0001370"}}}


id: GO:0120161
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cold-induced thermogenesis.","definition_xrefs":["PMID:27876809"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of metabolic process","termid":"GO:0019222"},{"relation_name":"is_a","term_name":"regulation of multicellular organismal process","termid":"GO:0051239"},{"relation_name":"regulates","term_name":"cold-induced thermogenesis","termid":"GO:0106106"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cold-induced thermogenesis","synonyms":[{"name":"regulation of CIT","type":"related"}],"termid":"GO:0120161"}


id: GO:0106143
data:
  {"annotated_genes":["SJAG_04848","SJAG_04680"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[116095,119372],"is_not":false,"summary":null,"term":"GO:0106143"}]},"cv_name":"cellular_component","definition":"A protein complex involved in the catalysis of the formation of the modified nucleotide 7-methylguanine (at position 46 in certain tRNAs, such as tRNA(phe) and tRNA(met). In yeast, it is a heterotetramer of two subunits, Trm8 (catalytic) and Trm82 (WD repeat).","definition_xrefs":["PMID:18184583","PMID:18164779","PMID:15811913","PMID:1738232","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA methyltransferase complex","termid":"GO:0043527"}],"gene_count":2,"genes_by_uniquename":{"SJAG_04680":null,"SJAG_04848":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"tRNA (m7G46) methyltransferase complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"Trm8-Trm82 complex","type":"exact"},{"name":"tRNA (m7G46) methyltransferase","type":"exact"},{"name":"tRNA m7G methylation complex","type":"exact"}],"termid":"GO:0106143","terms_by_termid":{"GO:0106143":null}}


id: PBO:0079598
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBE2E2 divergent transcript","termid":"PBO:0079598"}


id: MOD:01994
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-tryptophan residue to N1'-formyl-L-tryptophan.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-formyl-L-tryptophan","termid":"MOD:01106"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N1'-formyl-L-tryptophan","synonyms":[{"name":"N1'FoTrp","type":"exact"}],"termid":"MOD:01994"}


id: PBO:0070013
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1310, pseudogene","termid":"PBO:0070013"}


id: GO:0014727
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the frequency, rate or extent of extraocular skeletal muscle development. Extraocular skeletal muscle development is the process whose specific outcome is the progression of the extraocular skeletal muscle over time, from its formation to the mature structure. The extraocular muscle is derived from cranial mesoderm and controls eye movements. The muscle begins its development with the differentiation of the muscle cells and ends with the mature muscle.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of extraocular skeletal muscle development","termid":"GO:0014725"},{"relation_name":"is_a","term_name":"positive regulation of skeletal muscle tissue development","termid":"GO:0048643"},{"relation_name":"positively_regulates","term_name":"extraocular skeletal muscle development","termid":"GO:0002074"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of extraocular skeletal muscle development","termid":"GO:0014727"}


id: MONDO:0034987
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"pancreatic neoplasm","termid":"MONDO:0021040"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"intraductal tubulopapillary neoplasm of pancreas","secondary_identifiers":["UMLS:C2987189","GARD:22331","MEDGEN:459415","NCIT:C95506","Orphanet:580572"],"termid":"MONDO:0034987","xrefs":{"Monarch":{"xref_id":"0034987"}}}


id: GO:0006551
data:
  {"annotated_genes":["SJAG_04149","SJAG_04098","SJAG_02841","SJAG_03562","SJAG_06635","SJAG_03985","SJAG_03243","SJAG_00396"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[111480],"is_not":false,"summary":null,"term":"GO:0006551"},{"annotations":[113637,77316,103660,59379,80310,91048,75204],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009098"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving L-leucine, 2-amino-4-methylpentanoic acid.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyruvate family amino acid metabolic process","termid":"GO:0009078"},{"relation_name":"is_a","term_name":"branched-chain amino acid metabolic process","termid":"GO:0009081"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00396":null,"SJAG_02841":null,"SJAG_03243":null,"SJAG_03562":null,"SJAG_03985":null,"SJAG_04098":null,"SJAG_04149":null,"SJAG_06635":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0006520","GO:0044281"],"is_obsolete":false,"name":"L-leucine metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000107":null},"synonyms":[{"name":"L-leucine metabolism","type":"exact"},{"name":"leucine metabolic process","type":"broad"}],"termid":"GO:0006551","terms_by_termid":{"GO:0006551":null,"GO:0009098":null}}


id: PBO:0073815
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 6 member 17","termid":"PBO:0073815"}


id: MONDO:0008914
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cardioauditory syndrome of Sanchez Cascos","secondary_identifiers":["OMIM:212100","MEDGEN:395233","MESH:C535577","UMLS:C1859329"],"synonyms":[{"name":"Sanchez Cascos cardioauditory syndrome","type":"related"},{"name":"cardioauditory syndrome of Sanchez Cascos","type":"exact"}],"termid":"MONDO:0008914","xrefs":{"Monarch":{"xref_id":"0008914"}}}


id: MONDO:0008147
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Osteogenesis imperfecta type II is a lethal type of osteogenesis imperfecta (OI), a genetic disorder characterized by increased bone fragility, low bone mass and susceptibility to bone fractures. Patients with type II present multiple rib and long bone fractures at birth, marked deformities, broad long bones, low density on skull X-rays, and dark sclera.","definition_xrefs":["Orphanet:216804"],"direct_ancestors":[{"relation_name":"is_a","term_name":"osteogenesis imperfecta and a reduction of bone mineral density.","termid":"MONDO:0800064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"osteogenesis imperfecta type 2","secondary_identifiers":["MEDGEN:75673","OMIM:166210","icd11.foundation:2024049157","NCIT:C99001","UMLS:C0268358","DOID:0110341","GARD:10142","SCTID:86470003","MESH:C536042"],"synonyms":[{"name":"OI type 2","type":"exact"},{"name":"OI, type 2","type":"related"},{"name":"OI2","type":"exact"},{"name":"Perinatally lethal OI","type":"related"},{"name":"Vrolik type of osteogenesis imperfecta","type":"exact"},{"name":"lethal osteogenesis imperfecta","type":"exact"},{"name":"osteogenesis imperfecta congenita","type":"related"},{"name":"osteogenesis imperfecta congenita perinatal lethal form","type":"related"},{"name":"osteogenesis imperfecta congenita, perinatal lethal form","type":"related"},{"name":"osteogenesis imperfecta type 2","type":"exact"},{"name":"osteogenesis imperfecta type II","type":"exact"},{"name":"osteogenesis imperfecta, type 2","type":"related"},{"name":"osteogenesis imperfecta, type II","type":"related"},{"name":"perinatal lethal osteogenesis imperfecta congenita","type":"exact"}],"termid":"MONDO:0008147","xrefs":{"Monarch":{"xref_id":"0008147"}}}


id: GO:1902779
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an alkane stimulus.","definition_xrefs":["PMID:23826995","GOC:mengo_curators","PMID:22958739","GOC:TermGenie","GO_REF:0000071"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to chemical stimulus","termid":"GO:0070887"},{"relation_name":"is_a","term_name":"response to alkane","termid":"GO:1902778"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to alkane","termid":"GO:1902779"}


id: PBO:0040285
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase Na+/K+ transporting subunit beta 1","termid":"PBO:0040285"}


id: GO:0001064
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1). Utilizes a DNA template that contains a single-subunit-type RNA polymerase-specific promoter to direct initiation and catalyses DNA-template-directed extension of the 3'-end of an RNA strand by one nucleotide at a time. Can initiate a chain 'de novo'.","definition_xrefs":["GOC:txnOH"],"gene_count":0,"genotype_count":0,"name":"obsolete single subunit type RNA polymerase activity (obsolete GO:0001064)","synonyms":[{"name":"T3/T7 type RNA polymerase activity","type":"exact"}],"termid":"GO:0001064"}


id: PR:Q10343
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 5'-AMP-activated protein kinase subunit gamma-1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01573","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5'-AMP-activated protein kinase subunit gamma (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1556.08c","secondary_identifiers":["UniProtKB:Q10343"],"synonyms":[{"name":"AMPK gamma (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"AMPK subunit gamma (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-PRKAG1","type":"exact"}],"termid":"PR:Q10343"}


id: GO:1901078
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of relaxation of muscle.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"regulation of relaxation of muscle","termid":"GO:1901077"},{"relation_name":"negatively_regulates","term_name":"relaxation of muscle","termid":"GO:0090075"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of relaxation of muscle","synonyms":[{"name":"down regulation of relaxation of muscle","type":"exact"},{"name":"down-regulation of relaxation of muscle","type":"exact"},{"name":"downregulation of relaxation of muscle","type":"exact"},{"name":"inhibition of relaxation of muscle","type":"narrow"}],"termid":"GO:1901078"}


id: GO:0044613
data:
  {"annotated_genes":["SJAG_01013","SJAG_02425","SJAG_02210","SJAG_03593","SJAG_04721","SJAG_02274"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[71249,76482,77352,80399,94348,101755],"is_not":false,"summary":null,"term":"GO:0044613"}]},"cv_name":"cellular_component","definition":"The central substructure of the nuclear pore complex (NPC), through which nucleocytoplasmic transport of RNAs, proteins and small molecules occurs. The central transport channel is filled with FG-nucleoporins, which form a selective barrier and provide a series of binding sites for transporter proteins. Characterized S. cerevisiae FG-nucleoporins include Nup159p, Nup145Np, Nup116p, Nup100p, Nsp1p, Nup57p, Nup49p, Nup42p, Nup53p, Nup59p/Asm4p, Nup60p and Nup1. Characterized vertebrate FG-nucleoporins include Nup214, Nup98, Nup62, Nup54, Nup58/45, NLP1, and Nup153.","definition_xrefs":["PMID:19524430","PMID:20947011","PMID:22419078","GOC:dgf","PMID:18046406"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"},{"relation_name":"part_of","term_name":"nuclear pore","termid":"GO:0005643"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01013":null,"SJAG_02210":null,"SJAG_02274":null,"SJAG_02425":null,"SJAG_03593":null,"SJAG_04721":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"part_of","termid":"GO:0005643"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005643","GO:0005575","GO:0032991","GO:0005634"],"is_obsolete":false,"name":"nuclear pore central transport channel","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"karyopherin docking complex","type":"related"},{"name":"nuclear pore central channel","type":"exact"},{"name":"nuclear pore central plug","type":"exact"},{"name":"nuclear pore transport channel","type":"exact"}],"termid":"GO:0044613","terms_by_termid":{"GO:0044613":null}}


id: PR:O42925
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC16C6.01c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O42925"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C16C6.01c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16C6.01c","synonyms":[{"name":"Spom972h-SPBC16C6.01c","type":"exact"}],"termid":"PR:O42925"}


id: GO:0031788
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a motilin receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor binding","termid":"GO:0001664"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"motilin receptor binding","synonyms":[{"name":"motilin receptor ligand","type":"narrow"}],"termid":"GO:0031788"}


id: PBO:0050246
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosomal binding domain 2 pseudogene 24","termid":"PBO:0050246"}


id: PBO:0049834
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HDHD5 antisense RNA 1","termid":"PBO:0049834"}


id: GO:1904893
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of receptor signaling via STAT.","definition_xrefs":["GO_REF:0000058","PMID:24587195","GOC:TermGenie","GOC:rjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of signal transduction","termid":"GO:0009968"},{"relation_name":"is_a","term_name":"regulation of receptor signaling pathway via STAT","termid":"GO:1904892"},{"relation_name":"negatively_regulates","term_name":"cell surface receptor signaling pathway via STAT","termid":"GO:0097696"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of receptor signaling pathway via STAT","synonyms":[{"name":"down regulation of STAT cascade","type":"exact"},{"name":"down regulation of STAT signalling pathway","type":"exact"},{"name":"down regulation of kinase activated-STAT cascade","type":"exact"},{"name":"down regulation of kinase-STAT cascade","type":"exact"},{"name":"down-regulation of STAT cascade","type":"exact"},{"name":"down-regulation of STAT signalling pathway","type":"exact"},{"name":"down-regulation of kinase activated-STAT cascade","type":"exact"},{"name":"down-regulation of kinase-STAT cascade","type":"exact"},{"name":"downregulation of STAT cascade","type":"exact"},{"name":"downregulation of STAT signalling pathway","type":"exact"},{"name":"downregulation of kinase activated-STAT cascade","type":"exact"},{"name":"downregulation of kinase-STAT cascade","type":"exact"},{"name":"inhibition of STAT cascade","type":"narrow"},{"name":"inhibition of STAT signalling pathway","type":"narrow"},{"name":"inhibition of kinase activated-STAT cascade","type":"narrow"},{"name":"inhibition of kinase-STAT cascade","type":"narrow"},{"name":"negative regulation of STAT signalling pathway","type":"exact"},{"name":"negative regulation of kinase activated-STAT cascade","type":"exact"},{"name":"negative regulation of kinase-STAT cascade","type":"exact"}],"termid":"GO:1904893"}


id: PBO:0081870
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 812, pseudogene","termid":"PBO:0081870"}


id: GO:0050357
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: atropine + H2O = H+ + tropate + tropine.","definition_xrefs":["EC:3.1.1.10","RHEA:23304"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0003824","GO:0016788"],"is_obsolete":false,"name":"tropinesterase activity","secondary_identifiers":["MetaCyc:TROPINESTERASE-RXN","KEGG_REACTION:R03563"],"synonyms":[{"name":"atropinase activity","type":"related"},{"name":"atropine acylhydrolase activity","type":"related"},{"name":"atropine esterase activity","type":"related"},{"name":"atropinesterase activity","type":"related"},{"name":"tropine esterase activity","type":"related"}],"termid":"GO:0050357"}


id: GO:2000222
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of pseudohyphal growth.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell growth","termid":"GO:0030307"},{"relation_name":"is_a","term_name":"positive regulation of growth of unicellular organism as a thread of attached cells","termid":"GO:0070786"},{"relation_name":"is_a","term_name":"regulation of pseudohyphal growth","termid":"GO:2000220"},{"relation_name":"positively_regulates","term_name":"pseudohyphal growth","termid":"GO:0007124"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of pseudohyphal growth","termid":"GO:2000222"}


id: PBO:0084519
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Member of DUP240 gene family but contains no transmembrane domains; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm in a punctate pattern","termid":"PBO:0084519"}


id: GO:0140820
data:
  {"annotated_genes":["SJAG_03528","SJAG_01960","SJAG_00328"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93703],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036085"},{"annotations":[75115,104675],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904257"}]},"cv_name":"biological_process","definition":"The directed movement of substances from the cytosol into the Golgi apparatus of a cell.","definition_xrefs":["PMID:28373556"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transport","termid":"GO:0055085"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00328":null,"SJAG_01960":null,"SJAG_03528":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0055085","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"cytosol to Golgi apparatus transport","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0140820","terms_by_termid":{"GO:0036085":null,"GO:1904257":null}}


id: PBO:0018093
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA specific adenosine-37 deaminase Tad1 (predicted)","termid":"PBO:0018093"}


id: PBO:0031346
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_6-azauracil","termid":"PBO:0031346"}


id: PBO:0063603
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxisomal biogenesis factor 16","termid":"PBO:0063603"}


id: PBO:0072174
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S16 pseudogene 1","termid":"PBO:0072174"}


id: PBO:0062653
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 13 subfamily C member 3","termid":"PBO:0062653"}


id: FYPO:0004233
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which cell cycle arrest in response to nitrogen starvation occurs in G1 phase, but its occurrence is decreased and begins later than normal.","definition_xrefs":["PomBase:mah","PMID:21118960"],"direct_ancestors":[{"relation_name":"is_a","term_name":"delayed onset of cell cycle arrest in mitotic G1 phase in response to nitrogen starvation","termid":"FYPO:0000712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000298","FYPO:0001320","FYPO:0005447","FYPO:0000631","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased and delayed cell cycle arrest in mitotic G1 phase in response to nitrogen starvation","synonyms":[{"name":"decreased and delayed cell cycle arrest in mitotic G1 phase during cellular response to nitrogen starvation","type":"exact"},{"name":"decreased and delayed cell cycle arrest in mitotic G1 phase in response to nitrogen depletion","type":"exact"},{"name":"decreased and delayed cell cycle arrest in mitotic G1 phase in response to nitrogen deprivation","type":"exact"},{"name":"decreased and delayed mitotic G1 arrest in response to nitrogen starvation","type":"exact"},{"name":"decreased and delayed mitotic cell cycle arrest in G1 phase in response to nitrogen starvation","type":"exact"},{"name":"decreased and delayed nitrogen deprivation-induced G1 arrest","type":"exact"},{"name":"reduced and delayed cell cycle arrest in mitotic G1 phase in response to nitrogen starvation","type":"exact"}],"termid":"FYPO:0004233"}


id: GO:0004413
data:
  {"annotated_genes":["SJAG_03141"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[70117],"is_not":false,"summary":null,"term":"GO:0004413"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: L-homoserine + ATP = O-phospho-L-homoserine + ADP + 2 H+.","definition_xrefs":["RHEA:13985","EC:2.7.1.39"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"},{"relation_name":"is_a","term_name":"amino acid kinase activity","termid":"GO:0019202"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03141":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016301","GO:0016740"],"is_obsolete":false,"name":"homoserine kinase activity","references_by_uniquename":{"GO_REF:0000003":null},"secondary_identifiers":["MetaCyc:HOMOSERKIN-RXN","KEGG_REACTION:R01771"],"synonyms":[{"name":"ATP:L-homoserine O-phosphotransferase activity","type":"related"},{"name":"HSK","type":"related"},{"name":"homoserine kinase (phosphorylating)","type":"related"}],"termid":"GO:0004413","terms_by_termid":{"GO:0004413":null}}


id: PR:P58234
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rps1901 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P58234"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S19-A (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC21C3.13","synonyms":[{"name":"S16-A (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-rps1901","type":"exact"}],"termid":"PR:P58234"}


id: PBO:0078942
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Arg (anticodon CCT) 9-1","termid":"PBO:0078942"}


id: PBO:0000841
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CTP synthase Cts1 (predicted)","termid":"PBO:0000841"}


id: PBO:0050110
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 1 pseudogene 20","termid":"PBO:0050110"}


id: MONDO:0005621
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Damage to the blood vessels of the brain","definition_xrefs":["EFO:0006791"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cerebrovascular disorder","termid":"MONDO:0011057"},{"relation_name":"is_a","term_name":"brain injury","termid":"MONDO:0043510"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vascular brain injury","secondary_identifiers":["MESH:D020214"],"synonyms":[{"name":"Brain Vascular injury","type":"related"},{"name":"Brain Vascular trauma","type":"related"},{"name":"Brain injury, Vascular","type":"related"},{"name":"Vascular Brain Injuries","type":"related"},{"name":"Vascular Brain injury","type":"related"},{"name":"Vascular Traumas, Brain","type":"related"},{"name":"Vascular injury, Brain","type":"related"},{"name":"Vascular trauma, Brain","type":"related"},{"name":"injury, Brain Vascular","type":"related"},{"name":"injury, Vascular Brain","type":"related"},{"name":"injury, Vascular, Brain","type":"related"},{"name":"trauma, Brain Vascular","type":"related"},{"name":"trauma, cerebrovascular","type":"related"}],"termid":"MONDO:0005621","xrefs":{"Monarch":{"xref_id":"0005621"}}}


id: PBO:0041878
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ciliogenesis associated TTC17 interacting protein","termid":"PBO:0041878"}


id: MONDO:0017126
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oculo-skeletal-renal syndrome","secondary_identifiers":["Orphanet:2716"],"synonyms":[{"name":"oculo skeletal renal syndrome","type":"related"}],"termid":"MONDO:0017126","xrefs":{"Monarch":{"xref_id":"0017126"}}}


id: MONDO:0015889
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare hypothalamic or pituitary disease (obsolete MONDO:0015889)","secondary_identifiers":["Orphanet:181384"],"termid":"MONDO:0015889","xrefs":{"Monarch":{"xref_id":"0015889"}}}


id: PBO:0047408
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box protein 46","termid":"PBO:0047408"}


id: PBO:0086097
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein proposed to be involved in vacuolar functions; mutant shows defect in CPY processing and fragmented vacuoles; deletion mutant has increased glycogen accumulation and displays elongated buds; green fluorescent protein (GFP)-fusion protein localizes to the nucleus; ENV11 has a paralog, VID22, that arose from the whole genome duplication","termid":"PBO:0086097"}


id: MONDO:0001131
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete duodenum adenocarcinoma (obsolete MONDO:0001131)","termid":"MONDO:0001131","xrefs":{"Monarch":{"xref_id":"0001131"}}}


id: MONDO:0020513
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare variant of seminoma characterized by the presence of three cell types: round cells with eosinophilic cytoplasm, small cells with dark nucleus and a small amount of cytoplasm, and mono-or multinucleated giant cells. The neoplastic cells are not cohesive. There is an edematous stroma present; lymphocytic infiltrates are rarely seen. Most patients are older males.","definition_xrefs":["NCIT:C39921"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete spermatocytoma (obsolete MONDO:0003667)","termid":"MONDO:0003667"},{"relation_name":"is_a","term_name":"testicular seminoma","termid":"MONDO:0003669"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"spermatocytic seminoma","secondary_identifiers":["UMLS:C0334517","MEDGEN:83159","DOID:7891","Orphanet:99865","DOID:5834","ICDO:9063/3","GARD:16921"],"synonyms":[{"name":"spermatocytic seminoma","type":"exact"},{"name":"spermatocytoma","type":"related"},{"name":"testicular spermatocytic seminoma","type":"exact"}],"termid":"MONDO:0020513","xrefs":{"Monarch":{"xref_id":"0020513"}}}


id: MONDO:1012864
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A spongy encephalopathy that occurs in cats due to a mutation in the ASPA gene.","definition_xrefs":["PMID:33779415"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary neurological disease, non-human animal","termid":"MONDO:1012972"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"encephalopathy, ASPA-related, domestic cat","secondary_identifiers":["OMIA:002325-9685"],"synonyms":[{"name":"feline spongy encephalopathy","type":"related"}],"termid":"MONDO:1012864","xrefs":{"Monarch":{"xref_id":"1012864"}}}


id: FYPO:0005305
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle phenotype in which the duration of interphase of the mitotic cell cycle is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal mitotic cell cycle phase","termid":"FYPO:0002740"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000002","FYPO:0000257","FYPO:0001320"],"is_obsolete":false,"name":"normal duration of mitotic interphase","termid":"FYPO:0005305"}


id: PBO:0063471
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyruvate dehydrogenase complex component X","termid":"PBO:0063471"}


id: GO:1903307
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of regulated secretory pathway.","definition_xrefs":["GOC:pad","GOC:TermGenie","GO_REF:0000058","GOC:PARL","PMID:12526776"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of exocytosis","termid":"GO:0045921"},{"relation_name":"is_a","term_name":"regulation of regulated secretory pathway","termid":"GO:1903305"},{"relation_name":"positively_regulates","term_name":"regulated exocytosis","termid":"GO:0045055"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"positively_regulates","termid":"GO:0016192"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0016192","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of regulated secretory pathway","synonyms":[{"name":"activation of regulated secretory pathway","type":"narrow"},{"name":"up regulation of regulated secretory pathway","type":"exact"},{"name":"up-regulation of regulated secretory pathway","type":"exact"},{"name":"upregulation of regulated secretory pathway","type":"exact"}],"termid":"GO:1903307"}


id: FYPO:0005910
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of protein measured in a cell during a cellular response to endoplasmic reticulum stress is lower than normal. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein level during vegetative growth","termid":"FYPO:0001324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0006551","FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"decreased protein level during cellular response to endoplasmic reticulum stress","synonyms":[{"name":"decreased protein accumulation during cellular response to endoplasmic reticulum stress","type":"related"},{"name":"decreased protein level during cellular response to ER stress","type":"exact"},{"name":"decreased protein level during cellular response to endoplasmic reticulum stress during mitotic cell cycle","type":"related"},{"name":"decreased protein level during cellular response to endoplasmic reticulum stress during vegetative growth","type":"exact"},{"name":"reduced protein level during cellular response to endoplasmic reticulum stress","type":"exact"}],"termid":"FYPO:0005910"}


id: GO:0070478
data:
  {"annotated_genes":["SJAG_04084","SJAG_03805","SJAG_04153","SJAG_03179","SJAG_05014","SJAG_03886","SJAG_01218","SJAG_04321","SJAG_04824","SJAG_04006","SJAG_01521","SJAG_04118","SJAG_00854","SJAG_04056","SJAG_00226","SJAG_01818","SJAG_04818"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[75814,89116,90162,91886,93443,96278,97603,101598,102445,104767,105634,106842,107829,109206,116268,116530,118688],"is_not":false,"summary":null,"term":"GO:0070478"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of the nuclear-transcribed mRNA transcript body of an mRNA in which an amino-acid codon has changed to a nonsense codon; occurs when the 3' end is not protected by a 3'-poly(A) tail; degradation proceeds in the 3' to 5' direction.","definition_xrefs":["PMID:12769863"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear-transcribed mRNA catabolic process, nonsense-mediated decay","termid":"GO:0000184"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00226":null,"SJAG_00854":null,"SJAG_01218":null,"SJAG_01521":null,"SJAG_01818":null,"SJAG_03179":null,"SJAG_03805":null,"SJAG_03886":null,"SJAG_04006":null,"SJAG_04056":null,"SJAG_04084":null,"SJAG_04118":null,"SJAG_04153":null,"SJAG_04321":null,"SJAG_04818":null,"SJAG_04824":null,"SJAG_05014":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0016071"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0016071"],"is_obsolete":false,"name":"nuclear-transcribed mRNA catabolic process, 3'-5' exonucleolytic nonsense-mediated decay","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"3'-5' NMD","type":"exact"},{"name":"3'-5' nonsense-mediated decay","type":"exact"},{"name":"3'-5' nonsense-mediated mRNA decay","type":"exact"},{"name":"nuclear-transcribed mRNA breakdown, 3'-5' exonucleolytic nonsense-mediated decay","type":"exact"},{"name":"nuclear-transcribed mRNA catabolism, 3'-5' exonucleolytic nonsense-mediated decay","type":"exact"},{"name":"nuclear-transcribed mRNA degradation, 3'-5' exonucleolytic nonsense-mediated decay","type":"exact"}],"termid":"GO:0070478","terms_by_termid":{"GO:0070478":null}}


id: PBO:0059072
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"molybdenum cofactor synthesis 2","termid":"PBO:0059072"}


id: GO:0047527
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + 2,3-dihydroxybenzoate + L-serine = products of ATP breakdown + N-(2,3-dihydroxybenzoyl)-L-serine.","definition_xrefs":["EC:6.3.2.14"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acid-amino acid ligase activity","termid":"GO:0016881"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0016874","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"2,3-dihydroxybenzoate-serine ligase activity","secondary_identifiers":["RHEA:30571","MetaCyc:ENTMULTI-RXN"],"synonyms":[{"name":"2,3-dihydroxybenzoate:L-serine ligase activity","type":"related"},{"name":"2,3-dihydroxybenzoylserine synthetase activity","type":"related"},{"name":"N-(2,3-dihydroxybenzoyl)-serine synthetase activity","type":"related"}],"termid":"GO:0047527"}


id: PBO:0067119
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 164, pseudogene","termid":"PBO:0067119"}


id: PBO:0040888
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bone morphogenetic protein 10","termid":"PBO:0040888"}


id: MONDO:0009799
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete pachydermoperiostosis (obsolete MONDO:0009799)","secondary_identifiers":["NANDO:1200642","NANDO:2100288","NANDO:2201004"],"termid":"MONDO:0009799","xrefs":{"Monarch":{"xref_id":"0009799"}}}


id: PBO:0068443
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 17, pseudogene","termid":"PBO:0068443"}


id: PBO:0082364
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Autoregulatory, oleate-activated transcription factor; subunit of a heterodimeric complex with Oaf1p, which binds to oleate-response elements (ORE) in the promoter of genes involved in beta-oxidation of fatty acids, peroxisome organization and biogenesis, activating transcription in the presence of oleate; PIP2 has a paralog, OAF1, that arose from the whole genome duplication","termid":"PBO:0082364"}


id: PBO:0048675
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GLCCI1 divergent transcript","termid":"PBO:0048675"}


id: GO:1903271
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cytoplasmic translational elongation through polyproline stretches.","definition_xrefs":["PMID:24923804","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cytoplasmic translational elongation","termid":"GO:1900248"},{"relation_name":"is_a","term_name":"regulation of cytoplasmic translational elongation through polyproline stretches","termid":"GO:1903270"},{"relation_name":"negatively_regulates","term_name":"cytoplasmic translational elongation through polyproline stretches","termid":"GO:0097622"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0002181"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0002181"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0002181","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"negative regulation of cytoplasmic translational elongation through polyproline stretches","synonyms":[{"name":"down regulation of cytoplasmic translational elongation through polyproline stretches","type":"exact"},{"name":"down-regulation of cytoplasmic translational elongation through polyproline stretches","type":"exact"},{"name":"downregulation of cytoplasmic translational elongation through polyproline stretches","type":"exact"},{"name":"inhibition of cytoplasmic translational elongation through polyproline stretches","type":"narrow"}],"termid":"GO:1903271"}


id: PBO:0070550
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 16","termid":"PBO:0070550"}


id: GO:0071378
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a growth hormone stimulus. Growth hormone is a peptide hormone that binds to the growth hormone receptor and stimulates growth.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to growth hormone","termid":"GO:0060416"},{"relation_name":"is_a","term_name":"cellular response to peptide hormone stimulus","termid":"GO:0071375"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to growth hormone stimulus","termid":"GO:0071378"}


id: MONDO:0006827
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A syndrome caused by an infarct in the vertebral or posterior inferior cerebellar artery. It is characterized by sensory defects affecting the same side of the face as the infarct and the opposite side of the trunk as the infarct. Patients experience difficulty swallowing and/or speaking.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"brain stem infarction","termid":"MONDO:0006686"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lateral medullary syndrome","secondary_identifiers":["MESH:D014854","EFO:1001011","MEDGEN:53057","icd11.foundation:1606151456","ICD9:437.1","MedDRA:10024033","DOID:3522","NCIT:C84807","UMLS:C0043019","SCTID:78569004"],"synonyms":[{"name":"Lateral medullary syndrome","type":"related"},{"name":"PICA syndrome","type":"related"},{"name":"Posterior inferior cerebellar artery syndrome","type":"exact"},{"name":"Vertebral artery syndrome","type":"related"},{"name":"Wallenberg syndrome","type":"exact"},{"name":"Wallenberg's syndrome","type":"exact"}],"termid":"MONDO:0006827","xrefs":{"Monarch":{"xref_id":"0006827"}}}


id: MONDO:0013229
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hot water reflex epilepsy is a rare neurologic disease characterized by the onset of generalized or focal seizures following immersion of the head in hot water, or with hot water being poured over the head. Primary generalized tonic-clonic seizures have been reported in rare cases.","definition_xrefs":["Orphanet:166412"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited reflex epilepsy","termid":"MONDO:0023224"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"hot water reflex epilepsy","secondary_identifiers":["DOID:0081104","GARD:17028","MEDGEN:1631373","SCTID:230454005","OMIMPS:613339","ICD9:345.10","UMLS:C4706506"],"synonyms":[{"name":"bathing epilepsy","type":"related"},{"name":"epilepsy, hot water","type":"exact"},{"name":"hot water epilepsy","type":"exact"},{"name":"water immersion epilepsy","type":"related"}],"termid":"MONDO:0013229","xrefs":{"Monarch":{"xref_id":"0013229"}}}


id: FYPO:0006836
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to magnesium chloride. Cells stop growing (and may die) at a concentration of magnesium chloride that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0002683","FYPO:0000139","FYPO:0005447","FYPO:0000003","FYPO:0001985"],"is_obsolete":false,"name":"sensitive to magnesium chloride","synonyms":[{"name":"hypersensitive to magnesium chloride","type":"exact"},{"name":"sensitive to MgCl2","type":"exact"},{"name":"sensitive to magnesium chloride during mitotic cell cycle","type":"related"},{"name":"sensitive to magnesium chloride during vegetative growth","type":"exact"}],"termid":"FYPO:0006836"}


id: GO:0000374
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The splicing of Group III introns. This occurs by a ribozymic mechanism where the intron sequence forms a distinct 3D structure, characteristic of Group III introns, that is involved in catalyzing the splicing reactions, though protein factors are also required in vivo. Splicing occurs by a series of two transesterification reactions begun by a bulged adenosine residue within the intron sequence as the initiating nucleophile. The intron is excised as a lariat. Though very similar in structure and mechanism to Group II introns, Group III introns are smaller and more streamlined and the splice site consensus sequences are not as well conserved.","definition_xrefs":["GOC:krc","PMID:11377794"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA splicing, via transesterification reactions with bulged adenosine as nucleophile","termid":"GO:0000377"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"Group III intron splicing","synonyms":[{"name":"mRNA splicing","type":"related"}],"termid":"GO:0000374"}


id: GO:0010773
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of strand exchange proteins (recombinases) to form higher order oligomers on single-stranded DNA resulting in meiotic gene conversion. Meiotic gene conversion is the cell cycle process in which genetic information is transferred from one helix to another.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic DNA recombinase assembly","termid":"GO:0000707"},{"relation_name":"part_of","term_name":"meiotic gene conversion","termid":"GO:0006311"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006310"},{"rel_name":"part_of","termid":"GO:0006281"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006259","GO:0006310","GO:0006281","GO:0008150","GO:0065003","GO:0044085","GO:0007049"],"is_obsolete":false,"name":"meiotic DNA recombinase assembly involved in meiotic gene conversion","termid":"GO:0010773"}


id: PBO:0050285
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H6 family homeobox 2","termid":"PBO:0050285"}


id: GO:0031877
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a somatostatin receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuropeptide receptor binding","termid":"GO:0071855"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"somatostatin receptor binding","synonyms":[{"name":"somatostatin receptor ligand","type":"narrow"}],"termid":"GO:0031877"}


id: PBO:0059369
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MRPS18C pseudogene 2","termid":"PBO:0059369"}


id: PBO:0085080
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nuclear and mitochondrial glycosylase/lyase; specifically excises 7,8-dihydro-8-oxoguanine residues located opposite cytosine or thymine residues in DNA, repairs oxidative damage to mitochondrial DNA, contributes to UVA resistance","termid":"PBO:0085080"}


id: MONDO:0957388
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autoimmune disease, multisystem, infantile-onset","termid":"MONDO:0000213"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"autoimmune disease, multisystem, infantile-onset, 3","secondary_identifiers":["OMIM:620430","UMLS:C5830600","MEDGEN:1841236"],"termid":"MONDO:0957388","xrefs":{"Monarch":{"xref_id":"0957388"}}}


id: GO:0032103
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the rate of a response to an external stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to external stimulus","termid":"GO:0032101"},{"relation_name":"is_a","term_name":"positive regulation of response to stimulus","termid":"GO:0048584"},{"relation_name":"positively_regulates","term_name":"response to external stimulus","termid":"GO:0009605"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of response to external stimulus","synonyms":[{"name":"activation of response to external stimulus","type":"narrow"},{"name":"stimulation of response to external stimulus","type":"narrow"},{"name":"up regulation of response to external stimulus","type":"exact"},{"name":"up-regulation of response to external stimulus","type":"exact"},{"name":"upregulation of response to external stimulus","type":"exact"}],"termid":"GO:0032103"}


id: MOD:02068
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that contains an L-glutamic acid residue coordinated to one or more metal atoms or metal clusters.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-glutamic acid residue","termid":"MOD:00906"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metal or metal cluster coordinated L-glutamic acid residue","termid":"MOD:02068"}


id: PBO:0000001
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene characterisation status","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"biological role published","termid":"PBO:0000001"}


id: GO:0150128
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of interleukin-33 production.","definition_xrefs":["PMID:29778524","GOC:aruk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cytokine production","termid":"GO:0001818"},{"relation_name":"is_a","term_name":"regulation of interleukin-33 production","termid":"GO:0150127"},{"relation_name":"negatively_regulates","term_name":"interleukin-33 production","termid":"GO:0072639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"negative regulation of interleukin-33 production","secondary_identifiers":["GO:0150124","GO:0150131"],"synonyms":[{"name":"negative regulation of interleukin-33 biosynthetic process","type":"narrow"},{"name":"negative regulation of interleukin-33 secretion","type":"narrow"}],"termid":"GO:0150128"}


id: GO:0044862
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a protein out of a plasma membrane raft.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein transport out of membrane raft","termid":"GO:0032599"},{"relation_name":"is_a","term_name":"establishment of protein localization to membrane","termid":"GO:0090150"},{"relation_name":"is_a","term_name":"protein transport within plasma membrane","termid":"GO:0099632"},{"relation_name":"is_a","term_name":"protein localization to cell periphery","termid":"GO:1990778"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0061024","GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"protein transport out of plasma membrane raft","termid":"GO:0044862"}


id: PBO:0048868
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgin A4","termid":"PBO:0048868"}


id: PBO:0058007
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3934","termid":"PBO:0058007"}


id: PR:O13602
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mrps28 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13602"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"37S ribosomal protein S28, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC11B10.04c","synonyms":[{"name":"Spom972h-mrps28","type":"exact"}],"termid":"PR:O13602"}


id: PBO:0040110
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ASAP1 intronic transcript 1","termid":"PBO:0040110"}


id: GO:0009488
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. A copper-containing protein that acts as an electron carrier between methylamine dehydrogenase and cytochrome c.","definition_xrefs":["PMID:1655423"],"gene_count":0,"genotype_count":0,"name":"obsolete amicyanin (obsolete GO:0009488)","synonyms":[{"name":"amicyanin","type":"exact"}],"termid":"GO:0009488"}


id: GO:0030965
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The transfer of electrons from NADH to the quinone pool that occurs during oxidative phosphorylation and results in the generation of a proton gradient, mediated by the enzyme known as NADH-quinone oxidoreductase.","definition_xrefs":["GOC:sd","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"respiratory electron transport chain","termid":"GO:0022904"},{"relation_name":"part_of","term_name":"plasma membrane ATP synthesis coupled electron transport","termid":"GO:0042774"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006091"},{"rel_name":"part_of","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006091","GO:0008150"],"is_obsolete":false,"name":"plasma membrane electron transport, NADH to quinone","termid":"GO:0030965"}


id: PBO:0065149
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein arginine methyltransferase 1 pseudogene 1","termid":"PBO:0065149"}


id: PBO:0082842
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Constitutively expressed DL-glycerol-3-phosphate phosphatase; also known as glycerol-1-phosphatase; involved in glycerol biosynthesis, induced in response to both anaerobic and osmotic stress; GPP1 has a paralog, GPP2, that arose from the whole genome duplication","termid":"PBO:0082842"}


id: GO:0033055
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving D-arginine, the D-enantiomer of the amino acid arginine, i.e. (2R)-2-amino-5-(carbamimidamido)pentanoic acid.","definition_xrefs":["GOC:jsg","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"arginine metabolic process","termid":"GO:0006525"},{"relation_name":"is_a","term_name":"D-amino acid metabolic process","termid":"GO:0046416"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0006520","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"D-arginine metabolic process","synonyms":[{"name":"D-arginine metabolism","type":"exact"}],"termid":"GO:0033055"}


id: MOD:00535
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative","definition_xrefs":["PubMed:12216740","Unimod:178"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphorylation to amine thiol","synonyms":[{"name":"DAET","type":"related"},{"name":"phosphorylation to amine thiol","type":"related"}],"termid":"MOD:00535"}


id: FYPO:0004299
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which polynucleotide 5'-phosphatase activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal polynucleotide 5'-phosphatase activity","termid":"FYPO:0004298"},{"relation_name":"is_a","term_name":"abolished phosphatase activity","termid":"FYPO:0004303"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000652","FYPO:0000661","FYPO:0000654","FYPO:0001985"],"is_obsolete":false,"name":"abolished polynucleotide 5'-phosphatase activity","synonyms":[{"name":"polynucleotide 5'-phosphatase activity abolished","type":"exact"}],"termid":"FYPO:0004299"}


id: PBO:0028961
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_glycoprotein_glycan_structure","termid":"PBO:0028961"}


id: PBO:0045542
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dihydrouridine synthase 2","termid":"PBO:0045542"}


id: MONDO:0023003
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double fingernail of fifth finger","termid":"MONDO:0023003","xrefs":{"Monarch":{"xref_id":"0023003"}}}


id: MONDO:0019736
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Dense deposit disease, a histological subtype of MPGN is an idiopathic chronic progressive kidney disorder distinguished by the presence of intra-membranous dense deposits in addition to immune complex subendothelial deposits in the glomerular capillary walls. This form often has a higher recurrence rate after a kidney transplant and is associated with extra-renal manifestations such as familial drusen.","definition_xrefs":["Orphanet:93571"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"non-immunoglobulin-mediated membranoproliferative glomerulonephritis","termid":"MONDO:0018013"},{"relation_name":"is_a","term_name":"primary membranoproliferative glomerulonephritis","termid":"MONDO:0018904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"dense deposit disease","secondary_identifiers":["GARD:8555","NCIT:C123039","MEDGEN:124345","SCTID:722760002","UMLS:C0268743","NANDO:1200739"],"synonyms":[{"name":"MPGN 2","type":"related"},{"name":"Mesangiocapillary glomerulonephritis type 2","type":"exact"},{"name":"glomerulonephritis membranoproliferative type 2","type":"related"},{"name":"membranoproliferative glomerulonephritis type 2","type":"exact"},{"name":"membranoproliferative glomerulonephritis type II","type":"related"}],"termid":"MONDO:0019736","xrefs":{"Monarch":{"xref_id":"0019736"}}}


id: GO:0046414
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of organomercury compounds, any organic compound containing a mercury atom.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete organomercury biosynthetic process (obsolete GO:0046414)","synonyms":[{"name":"organomercury anabolism","type":"exact"},{"name":"organomercury biosynthesis","type":"exact"},{"name":"organomercury formation","type":"exact"},{"name":"organomercury synthesis","type":"exact"}],"termid":"GO:0046414"}


id: GO:0060738
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in the transfer of information from an epithelial cell to a mesenchymal cell where it is interpreted and contributes to the progression of the prostate gland over time.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial-mesenchymal cell signaling","termid":"GO:0060684"},{"relation_name":"part_of","term_name":"prostate gland development","termid":"GO:0030850"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"epithelial-mesenchymal signaling involved in prostate gland development","synonyms":[{"name":"epithelial-mesenchymal signalling involved in prostate gland development","type":"exact"}],"termid":"GO:0060738"}


id: MONDO:0022939
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete deafness hyperuricemia neurologic ataxia (obsolete MONDO:0022939)","termid":"MONDO:0022939","xrefs":{"Monarch":{"xref_id":"0022939"}}}


id: PBO:0065054
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRELI domain containing 3B pseudogene 8","termid":"PBO:0065054"}


id: PBO:0075528
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"speedy/RINGO cell cycle regulator family member E8","termid":"PBO:0075528"}


id: GO:0043982
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H4 by the addition of an acetyl group to a lysine residue at position 8 of the histone.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H4-K8 acetylation (obsolete GO:0043982)","synonyms":[{"name":"histone H4 acetylation at K8","type":"exact"}],"termid":"GO:0043982"}


id: MONDO:0800415
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited susceptibility to asthma","termid":"MONDO:0010940"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"asthma, aspirin-induced, susceptibility to","secondary_identifiers":["MEDGEN:362637","UMLS:C1876174"],"termid":"MONDO:0800415","xrefs":{"Monarch":{"xref_id":"0800415"}}}


id: FYPO:0007080
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the initial release of duplicated spindle pole bodies that begins with the nucleation of microtubules from each SPB within the nucleus, and occurs as part of the first meiotic nuclear division, is abnormal.","definition_xrefs":["PomBase:mah","PMID:31532702"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal spindle pole body organization","termid":"FYPO:0003560"},{"relation_name":"is_a","term_name":"abnormal meiosis I","termid":"FYPO:0003603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0000054"],"is_obsolete":false,"name":"abnormal initial meiotic spindle pole body separation in meiosis I","synonyms":[{"name":"abnormal initial meiotic spindle pole body separation in first meiotic nuclear division","type":"exact"},{"name":"abnormal initial mitotic SPB separation in meiosis I","type":"exact"}],"termid":"FYPO:0007080"}


id: MONDO:0100403
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any acute myeloid leukemia that has the chromosomal anomaly loss of chromosome 17p. (A cytogenetic abnormality that refers to the loss of all or part of the short arm of chromosome 17 (17p).)","definition_xrefs":["NCIT:C36499"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute myeloid leukemia","termid":"MONDO:0018874"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570","MONDO:0004992"],"is_obsolete":false,"name":"acute myeloid leukemia, loss of chromosome 17p","synonyms":[{"name":"AML, del(17p)","type":"exact"},{"name":"AML, loss of chromosome 17p","type":"exact"}],"termid":"MONDO:0100403","xrefs":{"Monarch":{"xref_id":"0100403"}}}


id: GO:0021946
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a deep nuclear neuron from the ventricular zone to the deep hindbrain nuclei.","definition_xrefs":["PMID:15157725","GOC:cls","GOC:dgh","GO_REF:0000021","GOC:dph","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell migration in hindbrain","termid":"GO:0021535"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"deep nuclear neuron cell migration","termid":"GO:0021946"}


id: PBO:0066446
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"REV3L intronic transcript 1","termid":"PBO:0066446"}


id: GO:0070168
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of biomineral tissue development, the formation of hard tissues that consist mainly of inorganic compounds.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"regulation of biomineral tissue development","termid":"GO:0070167"},{"relation_name":"negatively_regulates","term_name":"biomineral tissue development","termid":"GO:0031214"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of biomineral tissue development","termid":"GO:0070168"}


id: GO:0042103
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the rate or extent of resting T cell proliferation.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of T cell proliferation","termid":"GO:0042102"},{"relation_name":"is_a","term_name":"regulation of T cell homeostatic proliferation","termid":"GO:0046013"},{"relation_name":"positively_regulates","term_name":"T cell homeostatic proliferation","termid":"GO:0001777"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"positively_regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"positive regulation of T cell homeostatic proliferation","synonyms":[{"name":"activation of T cell homeostatic proliferation","type":"narrow"},{"name":"positive regulation of T lymphocyte homeostatic proliferation","type":"exact"},{"name":"positive regulation of T-cell homeostatic proliferation","type":"exact"},{"name":"positive regulation of T-lymphocyte homeostatic proliferation","type":"exact"},{"name":"positive regulation of resting T cell proliferation","type":"exact"},{"name":"stimulation of T cell homeostatic proliferation","type":"narrow"},{"name":"up regulation of T cell homeostatic proliferation","type":"exact"},{"name":"up-regulation of T cell homeostatic proliferation","type":"exact"},{"name":"upregulation of T cell homeostatic proliferation","type":"exact"}],"termid":"GO:0042103"}


id: PR:P41831
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC4A8.14 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P41831"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribose-phosphate pyrophosphokinase 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4A8.14","synonyms":[{"name":"Spom972h-SPAC4A8.14","type":"exact"},{"name":"phosphoribosyl pyrophosphate synthase 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P41831"}


id: SO:0002310
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The promoter of a cryptic gene.","definition_xrefs":["GREEKC:cl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"promoter","termid":"SO:0000167"},{"relation_name":"part_of","term_name":"cryptic_gene","termid":"SO:0001431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cryptic_promoter","synonyms":[{"name":"cryptic promoter","type":"exact"}],"termid":"SO:0002310"}


id: GO:0099074
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Vesicle-mediated transport of cargo from the mitochondrion to the lysosome, mediated by a mitochondrion-derived vesicle.","definition_xrefs":["GOC:pad","GOC:bc","GOC:PARL-UCL","PMID:20619655"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lysosomal transport","termid":"GO:0007041"},{"relation_name":"is_a","term_name":"mitochondrion-derived vesicle mediated transport","termid":"GO:0099075"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0016192","GO:0008150"],"is_obsolete":false,"name":"mitochondrion to lysosome vesicle-mediated transport","synonyms":[{"name":"mitochondrion to lysosome transport","type":"exact"}],"termid":"GO:0099074"}


id: PBO:0067235
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 306, pseudogene","termid":"PBO:0067235"}


id: PBO:0027206
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_mitotic_cell_cycle_arrest_with_condensed_chromosomes,_septated_cell","termid":"PBO:0027206"}


id: GO:1903904
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of establishment of T cell polarity.","definition_xrefs":["GO_REF:0000058","PMID:23575248","GOC:als","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of T cell activation","termid":"GO:0050868"},{"relation_name":"is_a","term_name":"regulation of establishment of T cell polarity","termid":"GO:1903903"},{"relation_name":"negatively_regulates","term_name":"establishment of T cell polarity","termid":"GO:0001768"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007163"},{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0007163"},{"rel_name":"negatively_regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007163","GO:0007155","GO:0008150"],"is_obsolete":false,"name":"negative regulation of establishment of T cell polarity","synonyms":[{"name":"down regulation of T cell polarization","type":"exact"},{"name":"down regulation of T lymphocyte polarization","type":"exact"},{"name":"down regulation of T-cell polarization","type":"exact"},{"name":"down regulation of establishment of T cell polarity","type":"exact"},{"name":"down regulation of establishment of T lymphocyte polarity","type":"exact"},{"name":"down regulation of establishment of T-cell polarity","type":"exact"},{"name":"down regulation of establishment of T-lymphocyte polarity","type":"exact"},{"name":"down-regulation of T cell polarization","type":"exact"},{"name":"down-regulation of T lymphocyte polarization","type":"exact"},{"name":"down-regulation of T-cell polarization","type":"exact"},{"name":"down-regulation of establishment of T cell polarity","type":"exact"},{"name":"down-regulation of establishment of T lymphocyte polarity","type":"exact"},{"name":"down-regulation of establishment of T-cell polarity","type":"exact"},{"name":"down-regulation of establishment of T-lymphocyte polarity","type":"exact"},{"name":"downregulation of T cell polarization","type":"exact"},{"name":"downregulation of T lymphocyte polarization","type":"exact"},{"name":"downregulation of T-cell polarization","type":"exact"},{"name":"downregulation of establishment of T cell polarity","type":"exact"},{"name":"downregulation of establishment of T lymphocyte polarity","type":"exact"},{"name":"downregulation of establishment of T-cell polarity","type":"exact"},{"name":"downregulation of establishment of T-lymphocyte polarity","type":"exact"},{"name":"inhibition of T cell polarization","type":"narrow"},{"name":"inhibition of T lymphocyte polarization","type":"narrow"},{"name":"inhibition of T-cell polarization","type":"narrow"},{"name":"inhibition of establishment of T cell polarity","type":"narrow"},{"name":"inhibition of establishment of T lymphocyte polarity","type":"narrow"},{"name":"inhibition of establishment of T-cell polarity","type":"narrow"},{"name":"inhibition of establishment of T-lymphocyte polarity","type":"narrow"},{"name":"negative regulation of T cell polarization","type":"exact"},{"name":"negative regulation of T lymphocyte polarization","type":"exact"},{"name":"negative regulation of T-cell polarization","type":"exact"},{"name":"negative regulation of establishment of T lymphocyte polarity","type":"exact"},{"name":"negative regulation of establishment of T-cell polarity","type":"exact"},{"name":"negative regulation of establishment of T-lymphocyte polarity","type":"exact"}],"termid":"GO:1903904"}


id: GO:0103113
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: glucosyl-oleandomycin + ATP + H2O = glucosyl-oleandomycin + ADP + hydrogenphosphate + H+.","definition_xrefs":["EC:3.6.3.-","GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete glucosyl-oleandomycin-exporting ATPase activity (obsolete GO:0103113)","termid":"GO:0103113"}


id: MONDO:0700160
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An adenoma arising from the mammary gland of a dog.","definition_xrefs":["NCIT:C147073"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mammary neoplasms, animal","termid":"MONDO:0025483"},{"relation_name":"is_a","term_name":"adenoma, non-human","termid":"MONDO:0700133"},{"relation_name":"is_a","term_name":"canine neoplasm","termid":"MONDO:0700139"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"canine mammary adenoma","termid":"MONDO:0700160","xrefs":{"Monarch":{"xref_id":"0700160"}}}


id: PBO:0032728
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_transcription_from_MCB_promoter","termid":"PBO:0032728"}


id: MONDO:0005140
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant neoplasm originating from the surface ovarian epithelium. It accounts for the greatest number of deaths from malignancies of the female genital tract and is the fifth leading cause of cancer fatalities in women. It is predominantly a disease of older white women of northern European extraction, but it is seen in all ages and ethnic groups. Adenocarcinomas constitute the vast majority of ovarian carcinomas. The pattern of metastatic spread in ovarian carcinoma is similar regardless of the microscopic type. The most common sites of involvement are the contralateral ovary, peritoneal cavity, para-aortic and pelvic lymph nodes, and liver. Lung and pleura are the most common sites of extra-abdominal spread. The primary form of therapy is surgical. The overall prognosis of ovarian carcinoma remains poor, a direct result of its rapid growth rate and the lack of early symptoms. --2002","definition_xrefs":["NCIT:C4908"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malignant epithelial tumor of ovary","termid":"MONDO:0018364"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"ovarian carcinoma","secondary_identifiers":["EFO:0001075","MEDGEN:1648335","UMLS:C4721610","DOID:4001"],"synonyms":[{"name":"carcinoma of ovary","type":"exact"},{"name":"carcinoma of the ovary","type":"exact"},{"name":"epithelial ovarian cancer","type":"exact"},{"name":"ovarian cancer","type":"broad"},{"name":"ovarian carcinoma","type":"exact"},{"name":"ovarian epithelial cancer","type":"broad"},{"name":"ovary carcinoma","type":"exact"}],"termid":"MONDO:0005140","xrefs":{"Monarch":{"xref_id":"0005140"}}}


id: FYECO:0000101
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Any experimental condition specifying the physical texture of the growth medium.","definition_xrefs":["PomBase:al"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE FYECO:0000101 medium texture (obsolete FYECO:0000101)","termid":"FYECO:0000101"}


id: MONDO:0000377
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A Leydig cell tumor characterized by large tumor size, the presence of cytologic atypia, increased mitotic activity, necrosis, and vascular invasion. Approximately 10% of the testicular Leydig cell tumors show malignant characteristics and metastasize. Leydig cell tumors of the ovary follow a benign clinical course.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reproductive system cancer","termid":"MONDO:0002149"},{"relation_name":"is_a","term_name":"Leydig cell tumor","termid":"MONDO:0006266"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"malignant Leydig cell tumor","secondary_identifiers":["MEDGEN:83143","NCIT:C4213","DOID:0050616","UMLS:C0334410","ICDO:8650/3"],"synonyms":[{"name":"Leydig cell cancer","type":"exact"},{"name":"Leydig cell tumor, malignant","type":"exact"},{"name":"cancer of Leydig cell","type":"exact"},{"name":"malignant Leydig cell neoplasm","type":"exact"},{"name":"malignant interstitial cell neoplasm","type":"exact"},{"name":"malignant interstitial cell tumor","type":"related"},{"name":"malignant interstitial cell tumour","type":"related"},{"name":"malignant neoplasm of Leydig cell","type":"exact"}],"termid":"MONDO:0000377","xrefs":{"Monarch":{"xref_id":"0000377"}}}


id: GO:0018762
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: R-CN + H2O = R-COOH + NH3.","definition_xrefs":["EC:3.5.5.7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nitrilase activity","termid":"GO:0000257"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016810"}],"interesting_parent_ids":["GO:0016810","GO:0003824","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"aliphatic nitrilase activity","secondary_identifiers":["RHEA:46188","MetaCyc:3.5.5.7-RXN","UM-BBD_reactionID:r0622"],"synonyms":[{"name":"aliphatic nitrile aminohydrolase activity","type":"related"}],"termid":"GO:0018762"}


id: MONDO:0014518
data:
  {"annotated_genes":["SJAG_04312"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87091],"is_not":false,"summary":null,"term":"MONDO:0014518"}]},"cv_name":"mondo","definition":"Any isolated hereditary giant platelet disorder in which the cause of the disease is a mutation in the PRKACG gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited bleeding disorder, platelet-type","termid":"MONDO:0000009"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04312":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"platelet-type bleeding disorder 19","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:616176","Orphanet:438207","GARD:17738","DOID:0111048","MEDGEN:863842","UMLS:C4015405"],"synonyms":[{"name":"BDPLT19","type":"exact"},{"name":"PRKACG isolated hereditary giant platelet disorder","type":"exact"},{"name":"bleeding disorder, platelet-type, 19","type":"related"},{"name":"isolated hereditary giant platelet disorder caused by mutation in PRKACG","type":"exact"},{"name":"severe autosomal recessive macrothrombocytopenia","type":"exact"}],"termid":"MONDO:0014518","terms_by_termid":{"MONDO:0014518":null},"xrefs":{"Monarch":{"xref_id":"0014518"}}}


id: GO:0016823
data:
  {"annotated_genes":["SJAG_00493"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73237],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0018773"},{"annotations":[107155],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0047621"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of any acid carbon-carbon bond in a ketonic substance, a substance containing a keto (C=O) group.","definition_xrefs":["EC:3.7.1.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on acid carbon-carbon bonds","termid":"GO:0016822"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00493":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"hydrolase activity, acting on acid carbon-carbon bonds, in ketonic substances","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0016823","terms_by_termid":{"GO:0018773":null,"GO:0047621":null}}


id: FYPO:0003980
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of glutathione transferase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0001985","FYPO:0000707","FYPO:0000654","FYPO:0000652"],"is_obsolete":false,"name":"abnormal glutathione transferase activity","termid":"FYPO:0003980"}


id: GO:1905566
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of receptor-mediated endocytosis of low-density lipoprotein particle involved in cholesterol transport.","definition_xrefs":["GO_REF:0000058","GOC:BHF","GOC:nc","GOC:TermGenie","PMID:22848640"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of receptor-mediated endocytosis of low-density lipoprotein particle involved in cholesterol transport (obsolete GO:1905566)","synonyms":[{"name":"down regulation of receptor-mediated endocytosis of LDL","type":"exact"},{"name":"down regulation of receptor-mediated endocytosis of low-density lipoprotein involved in cholesterol transport","type":"related"},{"name":"down regulation of receptor-mediated endocytosis of low-density lipoprotein particle involved in cholesterol transport","type":"exact"},{"name":"down-regulation of receptor-mediated endocytosis of LDL","type":"exact"},{"name":"down-regulation of receptor-mediated endocytosis of low-density lipoprotein involved in cholesterol transport","type":"related"},{"name":"down-regulation of receptor-mediated endocytosis of low-density lipoprotein particle involved in cholesterol transport","type":"exact"},{"name":"downregulation of receptor-mediated endocytosis of LDL","type":"exact"},{"name":"downregulation of receptor-mediated endocytosis of low-density lipoprotein involved in cholesterol transport","type":"related"},{"name":"downregulation of receptor-mediated endocytosis of low-density lipoprotein particle involved in cholesterol transport","type":"exact"},{"name":"inhibition of receptor-mediated endocytosis of LDL","type":"narrow"},{"name":"inhibition of receptor-mediated endocytosis of low-density lipoprotein involved in cholesterol transport","type":"related"},{"name":"inhibition of receptor-mediated endocytosis of low-density lipoprotein particle involved in cholesterol transport","type":"narrow"},{"name":"negative regulation of receptor-mediated endocytosis of LDL","type":"exact"},{"name":"negative regulation of receptor-mediated endocytosis of low-density lipoprotein involved in cholesterol transport","type":"related"}],"termid":"GO:1905566"}


id: PBO:0065175
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prominin 1","termid":"PBO:0065175"}


id: GO:2001084
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to L-arabinofuranose.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monosaccharide binding","termid":"GO:0048029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"L-arabinofuranose binding","termid":"GO:2001084"}


id: GO:0018713
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-ketopimeloyl-CoA + CoA = glutaryl-CoA + acetyl-CoA.","definition_xrefs":["UM-BBD_reactionID:r0197"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0016746","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"3-ketopimelyl-CoA thiolase activity","secondary_identifiers":["MetaCyc:RXN-8032"],"termid":"GO:0018713"}


id: PBO:0067654
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 831, pseudogene","termid":"PBO:0067654"}


id: PBO:0065977
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rap associating with DIL domain","termid":"PBO:0065977"}


id: GO:0002809
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of antibacterial peptide biosynthesis.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of antibacterial peptide production","termid":"GO:0002787"},{"relation_name":"is_a","term_name":"negative regulation of antimicrobial peptide biosynthetic process","termid":"GO:0002806"},{"relation_name":"is_a","term_name":"regulation of antibacterial peptide biosynthetic process","termid":"GO:0002808"},{"relation_name":"negatively_regulates","term_name":"antibacterial peptide biosynthetic process","termid":"GO:0002780"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"negative regulation of antibacterial peptide biosynthetic process","synonyms":[{"name":"down regulation of antibacterial peptide biosynthetic process","type":"exact"},{"name":"down-regulation of antibacterial peptide biosynthetic process","type":"exact"},{"name":"downregulation of antibacterial peptide biosynthetic process","type":"exact"},{"name":"inhibition of antibacterial peptide biosynthetic process","type":"narrow"}],"termid":"GO:0002809"}


id: MONDO:0000651
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A non-neoplastic or neoplastic disorder that affects the thorax and/or the organs of the thoracic cavity. Representative examples include pleural infection, mediastinitis, thymoma, mediastinal lymphoma, and pleural mesothelioma.","definition_xrefs":["NCIT:C35742"],"gene_count":0,"genotype_count":0,"name":"obsolete thoracic disorder (obsolete MONDO:0000651)","secondary_identifiers":["SCTID:118946009","MESH:D013896","DOID:0060118"],"synonyms":[{"name":"disease of thoracic segment of trunk","type":"exact"},{"name":"disease or disorder of thoracic segment of trunk","type":"exact"},{"name":"disorder of thoracic segment of trunk","type":"exact"},{"name":"disorder of thorax","type":"exact"},{"name":"thoracic disease","type":"exact"},{"name":"thoracic disorder","type":"exact"},{"name":"thoracic segment of trunk disease","type":"exact"},{"name":"thoracic segment of trunk disease or disorder","type":"exact"}],"termid":"MONDO:0000651","xrefs":{"Monarch":{"xref_id":"0000651"}}}


id: GO:0000767
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The change in form (cell shape and size) that occurs during sexual reproduction in order to facilitate direct contact between the compatible mating types.","definition_xrefs":["GOC:elh"],"gene_count":0,"genotype_count":0,"name":"obsolete cell morphogenesis involved in conjugation (obsolete GO:0000767)","termid":"GO:0000767"}


id: PBO:0075336
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sortilin related VPS10 domain containing receptor 1","termid":"PBO:0075336"}


id: GO:0018308
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The transient modification of lysine by pyruvate to form N6-pyruvic acid 2-iminyl-L-lysine, found in the active site of dihydrodipicolinate synthase.","definition_xrefs":["RESID:AA0287","PMID:1463470"],"gene_count":0,"genotype_count":0,"name":"obsolete enzyme active site formation via N6-pyruvic acid 2-iminyl-L-lysine (obsolete GO:0018308)","synonyms":[{"name":"enzyme active site formation via N6-pyruvic acid 2-iminyl-L-lysine","type":"exact"}],"termid":"GO:0018308"}


id: PBO:0078540
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 32","termid":"PBO:0078540"}


id: GO:1903860
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of dendrite extension.","definition_xrefs":["GO_REF:0000058","PMID:24898855","GOC:TermGenie","GOC:PARL","GOC:pad"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell growth","termid":"GO:0030308"},{"relation_name":"is_a","term_name":"negative regulation of developmental growth","termid":"GO:0048640"},{"relation_name":"is_a","term_name":"regulation of dendrite extension","termid":"GO:1903859"},{"relation_name":"negatively_regulates","term_name":"dendrite extension","termid":"GO:0097484"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of dendrite extension","synonyms":[{"name":"down regulation of dendrite extension","type":"exact"},{"name":"down-regulation of dendrite extension","type":"exact"},{"name":"downregulation of dendrite extension","type":"exact"},{"name":"inhibition of dendrite extension","type":"narrow"},{"name":"up regulation of dendrite retraction","type":"exact"},{"name":"up-regulation of dendrite retraction","type":"exact"}],"termid":"GO:1903860"}


id: PBO:0049477
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H1.1 linker histone, cluster member","termid":"PBO:0049477"}


id: PBO:0084762
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial mitophagy-specific protein; required primarily for mitophagy induced at post-log phase; not required for other types of selective autophagy or macroautophagy; conserved within fungi, but not in higher eukaryotes; ATG33 has a paralog, SCM4, that arose from the whole genome duplication","termid":"PBO:0084762"}


id: PBO:0013839
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"controlled curation, orthologous to S. cerevisiae YIL026C","termid":"PBO:0013839"}


id: PBO:0083936
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Galactokinase; phosphorylates alpha-D-galactose to alpha-D-galactose-1-phosphate in the first step of galactose catabolism; expression regulated by Gal4p; human homolog GALK2 complements yeast null mutant; GAL1 has a paralog, GAL3, that arose from the whole genome duplication","termid":"PBO:0083936"}


id: MONDO:0012267
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A holoprosencephaly that has material basis in variation in the chromosome region 14q13.","definition_xrefs":["DOID:0110879","PMID:15820313"],"direct_ancestors":[{"relation_name":"is_a","term_name":"holoprosencephaly","termid":"MONDO:0016296"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"holoprosencephaly 8","secondary_identifiers":["MESH:C563723","UMLS:C1836254","OMIM:609408","MEDGEN:322873"],"synonyms":[{"name":"HPE8","type":"exact"},{"name":"holoprosencephaly 8","type":"exact"},{"name":"holoprosencephaly type 8","type":"exact"}],"termid":"MONDO:0012267","xrefs":{"Monarch":{"xref_id":"0012267"}}}


id: PBO:0088105
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Uridine nucleosidase (uridine-cytidine N-ribohydrolase); cleaves N-glycosidic bonds in nucleosides; involved in the pyrimidine salvage and nicotinamide riboside salvage pathways","termid":"PBO:0088105"}


id: PBO:0058598
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6730","termid":"PBO:0058598"}


id: FYPO:0009071
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to itraconazole. Cells stop growing (and may die) at a concentration of itraconazole that allows wild type cells to grow.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0002683","FYPO:0001985","FYPO:0000139","FYPO:0005447"],"is_obsolete":false,"name":"sensitive to itraconazole","synonyms":[{"name":"hypersensitive to itraconazole","type":"exact"},{"name":"sensitive to itraconazole during mitotic cell cycle","type":"related"},{"name":"sensitive to itraconazole during vegetative growth","type":"exact"}],"termid":"FYPO:0009071"}


id: GO:1901038
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving cyanidin 3-O-beta-D-glucoside.","definition_xrefs":["GOC:TermGenie","PMID:21899608"],"direct_ancestors":[{"relation_name":"is_a","term_name":"flavonoid metabolic process","termid":"GO:0009812"},{"relation_name":"is_a","term_name":"beta-glucoside metabolic process","termid":"GO:1901804"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cyanidin 3-O-glucoside metabolic process","synonyms":[{"name":"cyanidin 3-O-beta-D-glucoside metabolic process","type":"exact"},{"name":"cyanidin 3-O-beta-D-glucoside metabolism","type":"exact"}],"termid":"GO:1901038"}


id: GO:1904352
data:
  {"annotated_genes":["SJAG_04990"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[99753],"is_not":false,"summary":null,"term":"GO:1904352"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of protein catabolic process in the vacuole.","definition_xrefs":["GOC:BHF","GOC:TermGenie","PMID:25635054","GO_REF:0000058","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein catabolic process","termid":"GO:0045732"},{"relation_name":"is_a","term_name":"regulation of protein catabolic process in the vacuole","termid":"GO:1904350"},{"relation_name":"positively_regulates","term_name":"protein catabolic process in the vacuole","termid":"GO:0007039"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04990":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0030163"},{"rel_name":"regulates","termid":"GO:0030163"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0030163","GO:0008150"],"is_obsolete":false,"name":"positive regulation of protein catabolic process in the vacuole","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of protein catabolic process in the vacuole","type":"narrow"},{"name":"activation of vacuolar protein breakdown","type":"related"},{"name":"activation of vacuolar protein catabolic process","type":"related"},{"name":"activation of vacuolar protein catabolism","type":"related"},{"name":"activation of vacuolar protein degradation","type":"related"},{"name":"positive regulation of vacuolar protein breakdown","type":"related"},{"name":"positive regulation of vacuolar protein catabolic process","type":"related"},{"name":"positive regulation of vacuolar protein catabolism","type":"related"},{"name":"positive regulation of vacuolar protein degradation","type":"related"},{"name":"up regulation of protein catabolic process in the vacuole","type":"exact"},{"name":"up regulation of vacuolar protein breakdown","type":"related"},{"name":"up regulation of vacuolar protein catabolic process","type":"related"},{"name":"up regulation of vacuolar protein catabolism","type":"related"},{"name":"up regulation of vacuolar protein degradation","type":"related"},{"name":"up-regulation of protein catabolic process in the vacuole","type":"exact"},{"name":"up-regulation of vacuolar protein breakdown","type":"related"},{"name":"up-regulation of vacuolar protein catabolic process","type":"related"},{"name":"up-regulation of vacuolar protein catabolism","type":"related"},{"name":"up-regulation of vacuolar protein degradation","type":"related"},{"name":"upregulation of protein catabolic process in the vacuole","type":"exact"},{"name":"upregulation of vacuolar protein breakdown","type":"related"},{"name":"upregulation of vacuolar protein catabolic process","type":"related"},{"name":"upregulation of vacuolar protein catabolism","type":"related"},{"name":"upregulation of vacuolar protein degradation","type":"related"}],"termid":"GO:1904352","terms_by_termid":{"GO:1904352":null}}


id: PBO:0068408
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein, transmembrane 1","termid":"PBO:0068408"}


id: PBO:0113167
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Integral ER membrane protein with type-III transmembrane domains; promotes ER membrane expansion by inhibiting the Nem1-Spo7 phosphatase complex, resulting in reduced dephosphorylation and activation of Pah1p; maintains homeostasis during ER stress; required for post-translational SRP-independent protein translocation into the ER; necessary for efficient targeting of the Trm1p to the inner nuclear membrane; mutations cause defects in cortical ER morphology; member of the SERINC superfamily","termid":"PBO:0113167"}


id: GO:1902276
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of pancreatic amylase secretion.","definition_xrefs":["GOC:TermGenie","GOC:jc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein secretion","termid":"GO:0050708"},{"relation_name":"regulates","term_name":"pancreatic amylase secretion","termid":"GO:0036395"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of pancreatic amylase secretion","termid":"GO:1902276"}


id: GO:0005121
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a Toll protein, a transmembrane receptor.","definition_xrefs":["GOC:ceb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor binding","termid":"GO:0005102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"Toll binding","synonyms":[{"name":"Tl binding","type":"exact"},{"name":"Toll ligand","type":"narrow"},{"name":"Toll receptor binding","type":"exact"}],"termid":"GO:0005121"}


id: MONDO:0011701
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inflammatory bowel disease that has material basis in variation in the chromosome region 14q11-q12.","definition_xrefs":["DOID:0110903","PMID:10747815"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inflammatory bowel disease","termid":"MONDO:0005265"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0004335"],"is_obsolete":false,"name":"inflammatory bowel disease 4","secondary_identifiers":["MEDGEN:339822","MESH:C564680","OMIM:606675","UMLS:C1847691"],"synonyms":[{"name":"IBD4","type":"exact"},{"name":"inflammatory bowel disease 4","type":"exact"},{"name":"inflammatory bowel disease type 4","type":"exact"}],"termid":"MONDO:0011701","xrefs":{"Monarch":{"xref_id":"0011701"}}}


id: MONDO:0019179
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Interstitial 9q22.3 microdeletion is associated with a phenotype including macrocephaly, overgrowth and trigonocephaly. Psychomotor delay, hyperactivity and distinctive facial features were also observed. It has been described in two unrelated children.","definition_xrefs":["Orphanet:77301"],"direct_ancestors":[{"relation_name":"is_a","term_name":"partial monosomy of the long arm of chromosome 9","termid":"MONDO:0016908"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"monosomy 9q22.3","secondary_identifiers":["GARD:18934","MEDGEN:777998","SCTID:724098008","UMLS:C3711390","MESH:C579873"],"synonyms":[{"name":"microdeletion 9q22.3","type":"exact"}],"termid":"MONDO:0019179","xrefs":{"Monarch":{"xref_id":"0019179"}}}


id: GO:0032026
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a magnesium ion stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to metal ion","termid":"GO:0010038"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to magnesium ion","termid":"GO:0032026"}


id: GO:0071454
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating a decline in oxygen levels to trace amounts, <0.1%.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to stress","termid":"GO:0033554"},{"relation_name":"is_a","term_name":"response to anoxia","termid":"GO:0034059"},{"relation_name":"is_a","term_name":"cellular response to decreased oxygen levels","termid":"GO:0036294"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to anoxia","synonyms":[{"name":"cellular response to anaerobic conditions","type":"exact"},{"name":"cellular response to anoxic stress","type":"exact"}],"termid":"GO:0071454"}


id: PBO:0049371
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"general transcription factor IIIA pseudogene 1","termid":"PBO:0049371"}


id: MOD:01971
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-glutamic acid residue to N2-ornithine.","definition_xrefs":["PubMed:23434852","ChEBI:136763","RESID:AA0613"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amidated residue","termid":"MOD:00674"},{"relation_name":"is_a","term_name":"modified L-glutamic acid residue","termid":"MOD:00906"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5-glutamyl N2-ornithine","synonyms":[{"name":"(2S)-5-amino-2-([(4S)-4-amino-4-carboxybutanoyl]amino)pentanoic acid","type":"exact"},{"name":"(2S)-5-amino-2-[(4S)-4-amino-4-carboxybutanamido]pentanoic acid","type":"exact"},{"name":"4-amino-5-[(4-amino-1-carboxy-butyl)amino]-5-ketovaleric acid","type":"exact"},{"name":"4-amino-5-[(4-amino-1-carboxy-butyl)amino]-5-oxopentanoic acid","type":"exact"},{"name":"5-glutamyl N2-ornithine","type":"exact"},{"name":"MOD_RES 5-glutamyl N2-ornithine","type":"exact"},{"name":"N2-(L-isoglutamyl)-L-ornithine","type":"exact"},{"name":"N2-(gamma-glutamyl)ornithine","type":"exact"},{"name":"gamma-glutamylornithine","type":"exact"}],"termid":"MOD:01971"}


id: MONDO:0035370
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any inflammatory bowel disease in which the cause of the disease is a mutation in the ALPI gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene","PMID:29567797"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inflammatory bowel disease","termid":"MONDO:0005265"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0005046"],"is_obsolete":false,"name":"ALPI-related inflammatory bowel disease","secondary_identifiers":["Orphanet:597887","MEDGEN:1842198","GARD:22400","UMLS:C5681586"],"termid":"MONDO:0035370","xrefs":{"Monarch":{"xref_id":"0035370"}}}


id: GO:0071356
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a tumor necrosis factor stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to tumor necrosis factor","termid":"GO:0034612"},{"relation_name":"is_a","term_name":"cellular response to cytokine stimulus","termid":"GO:0071345"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to tumor necrosis factor","synonyms":[{"name":"cellular response to TNF","type":"exact"}],"termid":"GO:0071356"}


id: PBO:0079267
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetratricopeptide repeat domain 39A","termid":"PBO:0079267"}


id: PBO:0061010
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"niban apoptosis regulator 3","termid":"PBO:0061010"}


id: GO:0097697
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-carboxymethoxyuridine34 in tRNA + S-adenosyl-L-methionine = 5-methoxycarbonylmethoxyuridine34 in tRNA + S-adenosyl-L-homocysteine.","definition_xrefs":["RHEA:54080","PMID:26681692"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA (uridine) methyltransferase activity","termid":"GO:0016300"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0140098","GO:0140101","GO:0003674","GO:0016740","GO:0016741","GO:0003824"],"is_obsolete":false,"name":"tRNA (5-carboxymethoxyuridine(34)-5-O)-methyltransferase activity","synonyms":[{"name":"tRNA 5-carboxymethoxyuridine methyltransferase activity","type":"related"}],"termid":"GO:0097697"}


id: GO:0000740
data:
  {"annotated_genes":["SJAG_00810"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[79007],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048288"}]},"cv_name":"biological_process","definition":"The joining of 2 or more lipid bilayer membranes that surround the nucleus.","definition_xrefs":["GOC:elh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear membrane organization","termid":"GO:0071763"},{"relation_name":"is_a","term_name":"organelle membrane fusion","termid":"GO:0090174"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00810":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0008150","GO:0061024"],"is_obsolete":false,"name":"nuclear membrane fusion","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0000740","terms_by_termid":{"GO:0048288":null}}


id: MONDO:0004164
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A variant of prostate carcinoma characterized by the presence of malignant cells forming syncytial patterns and dense lymphocytic infiltrates.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prostatic acinar adenocarcinoma","termid":"MONDO:0002493"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"lymphoepithelioma-like acinar prostate adenocarcinoma","secondary_identifiers":["NCIT:C39885","MEDGEN:1834954","UMLS:C5787176","DOID:7246"],"synonyms":[{"name":"acinar prostate adenocarcinoma, lymphoepithelioma-like variant","type":"exact"},{"name":"lymphoepithelioma-like variant acinar prostate adenocarcinoma","type":"exact"}],"termid":"MONDO:0004164","xrefs":{"Monarch":{"xref_id":"0004164"}}}


id: PBO:0053248
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LHX2 antisense RNA 1","termid":"PBO:0053248"}


id: PBO:0041813
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coactivator associated arginine methyltransferase 1 pseudogene 1","termid":"PBO:0041813"}


id: PR:Q9C117
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- png3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9C117"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C16E8.12c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC16E8.12c","synonyms":[{"name":"Spom972h-png3","type":"exact"}],"termid":"PR:Q9C117"}


id: GO:0090624
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the endonucleolytic cleavage of the mRNA in a double-stranded RNA molecule formed by the base pairing of an mRNA with an miRNA.","definition_xrefs":["GOC:rph","PMID:19239888","GOC:BHF","GOC:BHF_miRNA","PMID:15260970"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA endonuclease activity producing 5'-phosphomonoesters, hydrolytic mechanism","termid":"GO:0016891"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0016788","GO:0140098","GO:0003674"],"is_obsolete":false,"name":"endoribonuclease activity, cleaving miRNA-paired mRNA","termid":"GO:0090624"}


id: MONDO:0009458
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A multisystem disorder characterized by spondyloepiphyseal dysplasia and disproportionate short stature, facial dysmorphism, T-cell immunodeficiency, and glomerulonephritis with nephrotic syndrome.","definition_xrefs":["Orphanet:1830"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immuno-osseous dysplasia","termid":"MONDO:0015708"},{"relation_name":"is_a","term_name":"spondyloepiphyseal dysplasia","termid":"MONDO:0016761"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005497","MONDO:0005046"],"is_obsolete":false,"name":"Schimke immuno-osseous dysplasia","secondary_identifiers":["icd11.foundation:2002226225","NANDO:1200337","SCTID:723995003","GARD:4984","OMIM:242900","MedDRA:10048699","UMLS:C0877024","DOID:0060490","MEDGEN:164078","MESH:C536629","NCIT:C135087","NANDO:2200711"],"synonyms":[{"name":"IMMUNOOSSEOUS dysplasia, Schimke type","type":"related"},{"name":"SIOD","type":"related"},{"name":"Schimke IMMUNOOSSEOUS dysplasia","type":"related"},{"name":"Schimke Immunoosseous dysplasia","type":"related"},{"name":"Schimke immuno-osseous dysplasia","type":"exact"},{"name":"Schimke immunoosseous dysplasia","type":"exact"},{"name":"Schimke syndrome","type":"exact"},{"name":"immunoosseous dysplasia Schimke type","type":"exact"},{"name":"spondyloepiphyseal dysplasia - nephrotic syndrome","type":"exact"},{"name":"spondyloepiphyseal dysplasia nephrotic syndrome","type":"related"},{"name":"spondyloepiphyseal dysplasia-nephrotic syndrome","type":"exact"}],"termid":"MONDO:0009458","xrefs":{"Monarch":{"xref_id":"0009458"}}}


id: PBO:0035740
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_level_of_ubiquitinated_protein_in_cell_during_cellular_response_to_methyl_methanesulfonate","termid":"PBO:0035740"}


id: GO:0060384
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a nerve invades a tissue and makes functional synaptic connection within the tissue.","definition_xrefs":["GOC:sart","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal process","termid":"GO:0032501"},{"relation_name":"part_of","term_name":"nerve development","termid":"GO:0021675"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"innervation","termid":"GO:0060384"}


id: GO:0061671
data:
  {"annotated_genes":["SJAG_04560"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[60685],"is_not":false,"summary":null,"term":"GO:0061671"}]},"cv_name":"cellular_component","definition":"A protein complex located at the mitochondrial ribosome tunnel exit that is involved in efficient translation and protein complex assembly.","definition_xrefs":["GOC:dph","PMID:21670217","GOC:rb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial protein-containing complex","termid":"GO:0098798"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04560":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005739"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005739","GO:0032991","GO:0005737"],"is_obsolete":false,"name":"Cbp3p-Cbp6 complex","references_by_uniquename":{"GO_REF:0000002":null},"termid":"GO:0061671","terms_by_termid":{"GO:0061671":null}}


id: PBO:0056055
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lung cancer associated transcript 1","termid":"PBO:0056055"}


id: PBO:0030050
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_ferric-chelate_reductase_activity","termid":"PBO:0030050"}


id: MONDO:0100538
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"coagulation protein disease","termid":"MONDO:0002242"},{"relation_name":"is_a","term_name":"inherited blood coagulation disorder","termid":"MONDO:0021181"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"dysplasminogenemia","secondary_identifiers":["MEDGEN:904685","UMLS:C4225445"],"termid":"MONDO:0100538","xrefs":{"Monarch":{"xref_id":"0100538"}}}


id: PBO:0062414
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 43 pseudogene","termid":"PBO:0062414"}


id: GO:0090285
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that decreases the rate, frequency, or extent of the addition of a carbohydrate or carbohydrate derivative unit to a protein amino acid in any compartment of the Golgi apparatus.","definition_xrefs":["GOC:pr","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of protein glycosylation in Golgi (obsolete GO:0090285)","synonyms":[{"name":"negative regulation of protein amino acid glycosylation in Golgi","type":"exact"}],"termid":"GO:0090285"}


id: MONDO:0015825
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete obesity due to congenital leptin resistance (obsolete MONDO:0015825)","secondary_identifiers":["Orphanet:179490"],"termid":"MONDO:0015825","xrefs":{"Monarch":{"xref_id":"0015825"}}}


id: null:local:null
data:
  {"annotation_feature_type":"gene","cv_name":"null","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"null","termid":"null:local:null"}


id: PBO:0001421
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ypt subfamily","termid":"PBO:0001421"}


id: MONDO:0020426
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Malposition of the coronary ostium is a rare coronary artery congenital malformation characterized by displacement of one of the coronary arteries, originating closer to the aortic root or to the commissural area. The anomaly is considered to be asymptomatic, however, it may impose surgical difficulties during aortic root surgery.","definition_xrefs":["Orphanet:99090"],"direct_ancestors":[{"relation_name":"is_a","term_name":"coronary artery congenital malformation","termid":"MONDO:0015203"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"malposition of the coronary ostium","secondary_identifiers":["MEDGEN:759190","UMLS:C3532077","GARD:19645"],"termid":"MONDO:0020426","xrefs":{"Monarch":{"xref_id":"0020426"}}}


id: PBO:0038982
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adrenoceptor alpha 1B","termid":"PBO:0038982"}


id: MONDO:1010892
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any neuronal ceroid lipofuscinosis that occurs in dogs due to a mutation in the CTSD gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuronal ceroid lipofuscinosis, dog","termid":"MONDO:1011570"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuronal ceroid lipofuscinosis, CTSD-related, dog","secondary_identifiers":["OMIA:001505-9615"],"synonyms":[{"name":"neuronal ceroid lipofuscinosis, 10, dog","type":"related"}],"termid":"MONDO:1010892","xrefs":{"Monarch":{"xref_id":"1010892"}}}


id: FYPO:0008220
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the G2/M phase of the mitotic cycle in which monomethylation of lysine at position 20 of histone H4 in regions of the genome that are actively transcribed occurs to a greater extent than normal.","direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone H4-K20 monomethylation during vegetative growth","termid":"FYPO:0004223"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0002494"],"is_obsolete":false,"name":"increased histone H4-K20 monomethylation in transcribed regions during mitotic G2/M phase","termid":"FYPO:0008220"}


id: PBO:0002601
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial PPR repeat protein Ppr5","termid":"PBO:0002601"}


id: PBO:0034213
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-in_mimicry_relationship_with","termid":"PBO:0034213"}


id: MONDO:0035541
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete split cord malformation type II (obsolete MONDO:0035541)","secondary_identifiers":["Orphanet:573253"],"termid":"MONDO:0035541","xrefs":{"Monarch":{"xref_id":"0035541"}}}


id: PBO:0055976
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat kinase 2","termid":"PBO:0055976"}


id: PBO:0090189
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial TOM complex subunit Tom40","termid":"PBO:0090189"}


id: MONDO:0100257
data:
  {"annotated_genes":["SJAG_00702","SJAG_00326","SJAG_04823"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86337],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013571"},{"annotations":[86673],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009958"},{"annotations":[86408],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008972"},{"annotations":[86257],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014743"}]},"cv_name":"mondo","definition":"Any peroxisomal disease in which the cause of the disease is a defect in a single enyme or protein.","direct_ancestors":[{"relation_name":"is_a","term_name":"peroxisomal disease","termid":"MONDO:0019053"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00326":null,"SJAG_00702":null,"SJAG_04823":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0019053"}],"interesting_parent_ids":["MONDO:0019053","MONDO:0005066"],"is_obsolete":false,"name":"peroxisomal single enzyme/protein defect","references_by_uniquename":{"PB_REF:0000006":null},"synonyms":[{"name":"peroxisomal single enzyme/protein defect","type":"exact"}],"termid":"MONDO:0100257","terms_by_termid":{"MONDO:0008972":null,"MONDO:0009958":null,"MONDO:0013571":null,"MONDO:0014743":null},"xrefs":{"Monarch":{"xref_id":"0100257"}}}


id: MONDO:0000992
data:
  {"annotated_genes":["SJAG_01183","SJAG_04901","SJAG_04781","SJAG_02717","SJAG_03081","SJAG_01012","SJAG_02785","SJAG_00409"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85425,85426],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012728"},{"annotations":[86315],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013529"},{"annotations":[87556,87557],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013966"},{"annotations":[87072,87073],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032915"},{"annotations":[85941],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0859368"},{"annotations":[86726],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0859173"},{"annotations":[86393],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008685"}]},"cv_name":"mondo","definition":"A disease that has its basis in the disruption of the heart's electrical conduction system.","direct_ancestors":[{"relation_name":"is_a","term_name":"heart disorder","termid":"MONDO:0005267"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00409":null,"SJAG_01012":null,"SJAG_01183":null,"SJAG_02717":null,"SJAG_02785":null,"SJAG_03081":null,"SJAG_04781":null,"SJAG_04901":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"heart conduction disease","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["ICD9:426.6","SCTID:44808001","DOID:10273"],"synonyms":[{"name":"cardiac conduction disease","type":"exact"},{"name":"cardiac conduction disorder","type":"exact"},{"name":"conduction disease of heart","type":"exact"},{"name":"disease of cardiac conduction","type":"exact"},{"name":"disorder of cardiac conduction","type":"exact"},{"name":"heart rhythm disease","type":"exact"}],"termid":"MONDO:0000992","terms_by_termid":{"MONDO:0008685":null,"MONDO:0012728":null,"MONDO:0013529":null,"MONDO:0013966":null,"MONDO:0032915":null,"MONDO:0859173":null,"MONDO:0859368":null},"xrefs":{"Monarch":{"xref_id":"0000992"}}}


id: GO:0001319
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A protein localization process in which progeny cells acquire, or are barred from acquiring, proteins that have been altered by reaction with reactive oxygen species in dividing aging cells.","definition_xrefs":["GOC:jh"],"gene_count":0,"genotype_count":0,"name":"obsolete inheritance of oxidatively modified proteins involved in replicative cell aging (obsolete GO:0001319)","synonyms":[{"name":"inheritance of oxidatively modified proteins during replicative cell ageing","type":"related"},{"name":"inheritance of oxidatively modified proteins during replicative cell aging","type":"related"}],"termid":"GO:0001319"}


id: PBO:0071040
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 42","termid":"PBO:0071040"}


id: MONDO:0001531
data:
  {"annotated_genes":["SJAG_00108","SJAG_01466","SJAG_02093","SJAG_03204","SJAG_02091","SJAG_02839","SJAG_01732","SJAG_03712","SJAG_03115","SJAG_02453"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86485,86483,86484],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0018794"},{"annotations":[86690],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009206"},{"annotations":[86488],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014885"},{"annotations":[86348],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011997"},{"annotations":[85580],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012465"},{"annotations":[87644,87643],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008559"},{"annotations":[86287],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010518"}]},"cv_name":"mondo","definition":"A condition in which there is a deviation from or interruption of the normal coagulation properties of the blood.","definition_xrefs":["NCIT:C2902"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hematologic disorder","termid":"MONDO:0005570"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00108":null,"SJAG_01466":null,"SJAG_01732":null,"SJAG_02091":null,"SJAG_02093":null,"SJAG_02453":null,"SJAG_02839":null,"SJAG_03115":null,"SJAG_03204":null,"SJAG_03712":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"blood coagulation disease","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:64779008","DOID:1247","ICD9:286.9","EFO:0009314","ICD9:286","MEDGEN:604","ICD9:287.8","MESH:D001778","UMLS:C0005779"],"synonyms":[{"name":"blood coagulation disorder","type":"exact"},{"name":"coagulation defect","type":"exact"},{"name":"coagulation disorder","type":"exact"},{"name":"coagulation disorder, blood","type":"exact"},{"name":"coagulation disorders, blood","type":"exact"},{"name":"coagulopathy","type":"exact"},{"name":"disorder, blood coagulation","type":"exact"},{"name":"disorders, blood coagulation","type":"exact"},{"name":"postpartum coagulation defect","type":"exact"},{"name":"postpartum coagulation defect with delivery","type":"exact"}],"termid":"MONDO:0001531","terms_by_termid":{"MONDO:0008559":null,"MONDO:0009206":null,"MONDO:0010518":null,"MONDO:0011997":null,"MONDO:0012465":null,"MONDO:0014885":null,"MONDO:0018794":null},"xrefs":{"Monarch":{"xref_id":"0001531"}}}


id: PBO:0027570
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_nuclear_pore_distribution_during_mitosis","termid":"PBO:0027570"}


id: PBO:0088107
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Uroporphyrinogen decarboxylase; catalyzes the fifth step in the heme biosynthetic pathway; localizes to both the cytoplasm and nucleus; a hem12 mutant has phenotypes similar to patients with porphyria cutanea tarda","termid":"PBO:0088107"}


id: PBO:0087661
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the Iml1p/SEACIT complex; SEACIT (Iml1p-Npr2p-Npr3p) is a subcomplex of the SEA complex, a coatomer-related complex that associates dynamically with the vacuole; Npr2p may have a structural or regulatory role, supporting Iml1p function as a GAP for the Rag family GTPase Gtr1p, and resulting in inhibition of TORC1 signaling in response to amino acid deprivation; SEACIT is required for non-nitrogen-starvation-induced autophagy; homolog of human tumor suppressor NPRL2","termid":"PBO:0087661"}


id: MOD:01220
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative -","definition_xrefs":["PubMed:9254591","Unimod:286#E","PubMed:15121203"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Sulfanilic Acid (SA), heavy C13","termid":"MOD:00606"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sulfanilic Acid (SA), heavy C13 - site E","synonyms":[{"name":"Heavy Sulfanilic Acid (SA) C13","type":"related"},{"name":"SulfanilicAcid:13C(6)","type":"related"}],"termid":"MOD:01220"}


id: GO:0047382
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-methyl-3-phospho-1-thio-D-glycerate + H2O = S-methyl-1-thio-D-glycerate + phosphate.","definition_xrefs":["RHEA:16081","EC:3.1.3.14"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase activity","termid":"GO:0016791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016788","GO:0003674","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"methylphosphothioglycerate phosphatase activity","secondary_identifiers":["MetaCyc:3.1.3.14-RXN","KEGG_REACTION:R04317"],"synonyms":[{"name":"S-methyl-3-phospho-1-thio-D-glycerate phosphohydrolase activity","type":"related"},{"name":"methylthiophosphoglycerate phosphatase activity","type":"related"}],"termid":"GO:0047382"}


id: PBO:0052038
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Jun proto-oncogene, AP-1 transcription factor subunit","termid":"PBO:0052038"}


id: MONDO:0100371
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A new infection by the hepatitis C virus, which can be detected in blood. Signs and symptoms may include right upper quadrant abdominal pain, jaundice, dark urine, white stools and nausea. Approximately 15%-25% individuals clear the virus from their bodies without treatment. 75%-85% individuals develop chronic hepatitis C. There are possible treatments depending on individual characteristics.","definition_xrefs":["NCIT:C157782"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hepatitis C virus infection","termid":"MONDO:0005231"},{"relation_name":"is_a","term_name":"acute disease","termid":"MONDO:0020683"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0002515","MONDO:0004335"],"is_obsolete":false,"name":"acute hepatitis C virus infection","synonyms":[{"name":"acute hepatitis C","type":"exact"}],"termid":"MONDO:0100371","xrefs":{"Monarch":{"xref_id":"0100371"}}}


id: GO:0072001
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the renal system over time, from its formation to the mature structure. The renal system maintains fluid balance and contributes to electrolyte balance, acid/base balance, and disposal of nitrogenous waste products. In humans, the renal system comprises a pair of kidneys, a pair of ureters, urinary bladder, urethra, sphincter muscle and associated blood vessels.","definition_xrefs":["GOC:mtg_kidney_jan10","GOC:yaf","PMID:6996269"],"direct_ancestors":[{"relation_name":"is_a","term_name":"system development","termid":"GO:0048731"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"renal system development","synonyms":[{"name":"urinary system development","type":"broad"},{"name":"urinary tract development","type":"broad"}],"termid":"GO:0072001"}


id: MONDO:0020519
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A multifocal, unisystem form of Langerhans-cell histiocytosis. There is involvement of multiple sites in one organ system, most frequently the bone. Patients are usually young children presenting with multiple destructive bone lesions.","definition_xrefs":["NCIT:C6920"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Langerhans cell histiocytosis","termid":"MONDO:0018310"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"hand-Schuller-Christian disease","secondary_identifiers":["ICD9:277.89","Orphanet:99873","MEDGEN:1804593","ICDO:9753/1","UMLS:C5574737","SCTID:39795003","GARD:6567"],"synonyms":[{"name":"chronic multifocal Langerhans cell histiocytosis","type":"exact"},{"name":"classic multifocal Langerhans cell histiocytosis","type":"exact"},{"name":"hand-SChüller-Christian disease","type":"exact"},{"name":"hand-Schuller-Christian disease","type":"exact"},{"name":"multifocal Unisystem Langerhans cell histiocytosis","type":"exact"},{"name":"multifocal eosinophilic granuloma","type":"exact"}],"termid":"MONDO:0020519","xrefs":{"Monarch":{"xref_id":"0020519"}}}


id: GO:0051352
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops or reduces the rate of ligase activity, the catalysis of the ligation of two substances with concomitant breaking of a diphosphate linkage, usually in a nucleoside triphosphate.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of ligase activity (obsolete GO:0051352)","synonyms":[{"name":"down regulation of ligase activity","type":"exact"},{"name":"down-regulation of ligase activity","type":"exact"},{"name":"downregulation of ligase activity","type":"exact"},{"name":"inhibition of ligase activity","type":"narrow"},{"name":"ligase inhibitor","type":"exact"}],"termid":"GO:0051352"}


id: GO:2000492
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of interleukin-18-mediated signaling pathway.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokine-mediated signaling pathway","termid":"GO:0001959"},{"relation_name":"regulates","term_name":"interleukin-18-mediated signaling pathway","termid":"GO:0035655"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of interleukin-18-mediated signaling pathway","synonyms":[{"name":"regulation of interleukin-18-mediated signalling pathway","type":"exact"}],"termid":"GO:2000492"}


id: MONDO:0004087
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A morphologic variant of large cell lung carcinoma characterized by the presence of a solid nodular or anastomotic trabecular growth pattern, peripheral palisading, and comedo type necrosis.","definition_xrefs":["NCIT:C7266"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"squamous cell lung carcinoma","termid":"MONDO:0005097"},{"relation_name":"is_a","term_name":"lung large cell carcinoma","termid":"MONDO:0003050"},{"relation_name":"is_a","term_name":"basaloid carcinoma","termid":"MONDO:0006102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"basaloid large cell lung carcinoma","secondary_identifiers":["DOID:7045","MEDGEN:231419","ONCOTREE:BLCLC","UMLS:C1332463"],"synonyms":[{"name":"basaloid large cell carcinoma of the lung","type":"related"},{"name":"basaloid large cell lung carcinoma","type":"exact"},{"name":"basaloid lung carcinoma","type":"related"}],"termid":"MONDO:0004087","xrefs":{"Monarch":{"xref_id":"0004087"}}}


id: PBO:0063600
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxisomal biogenesis factor 12 pseudogene 1","termid":"PBO:0063600"}


id: FYPO:0000146
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A transcription regulation phenotype observed in the vegetative growth phase of the life cycle in which chromatin silencing is abnormal in centromeric regions. Chromatin silencing is the observed effect of processes that repress transcription in a region of the genome that is normally assembled into heterochromatin or CENP-A-containing chromatin (the latter is found at the centromere central core).","definition_xrefs":["PomBase:vw","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromatin silencing","termid":"FYPO:0000144"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0006551"],"is_obsolete":false,"name":"abnormal chromatin silencing at centromere","synonyms":[{"name":"abnormal chromatin silencing at centromere during mitotic cell cycle","type":"related"},{"name":"abnormal chromatin silencing at centromere during vegetative growth","type":"exact"},{"name":"abnormal heterochromatin silencing at centromere","type":"related"}],"termid":"FYPO:0000146"}


id: GO:2000917
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of glucuronoxylan catabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of glucuronoxylan catabolic process","termid":"GO:2000915"},{"relation_name":"is_a","term_name":"positive regulation of xylan catabolic process","termid":"GO:2001002"},{"relation_name":"positively_regulates","term_name":"glucuronoxylan catabolic process","termid":"GO:2000886"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"positive regulation of glucuronoxylan catabolic process","synonyms":[{"name":"positive regulation of glucuronoxylan catabolism","type":"exact"}],"termid":"GO:2000917"}


id: PBO:0079970
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"USP9Y pseudogene 8","termid":"PBO:0079970"}


id: GO:0008989
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + rRNA = S-adenosyl-L-homocysteine + rRNA containing N1-methylguanine.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-methyltransferase activity","termid":"GO:0008170"},{"relation_name":"is_a","term_name":"rRNA (guanine) methyltransferase activity","termid":"GO:0016435"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0140098","GO:0016741","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"rRNA (guanine-N1-)-methyltransferase activity","secondary_identifiers":["KEGG_REACTION:R07233"],"synonyms":[{"name":"S-adenosyl-L-methionine:rRNA (guanine-1-N-)-methyltransferase activity","type":"exact"},{"name":"S-adenosyl-L-methionine:rRNA (guanine-N1-)-methyltransferase activity","type":"related"},{"name":"ribosomal ribonucleate guanine 1-methyltransferase activity","type":"exact"}],"termid":"GO:0008989"}


id: PBO:0047883
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, aphidicolin type, common, fra(5)(q15)","termid":"PBO:0047883"}


id: PBO:0050205
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosome binding domain 1 pseudogene 22","termid":"PBO:0050205"}


id: GO:0018575
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 3,6-dichlorocatechol + O2 = 2 H+ + 2,5-dichloro-cis,cis-muconate.","definition_xrefs":["UM-BBD_reactionID:r0655"],"gene_count":0,"genotype_count":0,"name":"obsolete chlorocatechol 1,2-dioxygenase activity (obsolete GO:0018575)","termid":"GO:0018575"}


id: PBO:0036051
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_cell_cortex_of_cell_tip","termid":"PBO:0036051"}


id: PBO:0045893
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 gamma pseudogene 5","termid":"PBO:0045893"}


id: PBO:0058883
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 10399","termid":"PBO:0058883"}


id: GO:0050535
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a 6-O-(beta-D-xylopyranosyl)-beta-D-glucopyranoside + H2O = 6-O-(beta-D-xylopyranosyl)-beta-D-glucopyranose + an alcohol.","definition_xrefs":["RHEA:24480"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0016798","GO:0003674"],"is_obsolete":false,"name":"beta-primeverosidase activity","secondary_identifiers":["MetaCyc:3.2.1.149-RXN","EC:3.2.1.149"],"synonyms":[{"name":"6-O-(beta-D-xylopyranosyl)-beta-D-glucopyranoside 6-O-(beta-D-xylosyl)-beta-D-glucohydrolase activity","type":"related"},{"name":"b-primeverosidase activity","type":"exact"}],"termid":"GO:0050535"}


id: MONDO:0030055
data:
  {"annotated_genes":["SJAG_00237"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85716],"is_not":false,"summary":null,"term":"MONDO:0030055"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"neuronopathy, distal hereditary motor, autosomal recessive","termid":"MONDO:0015363"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00237":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005559","MONDO:0005244"],"is_obsolete":false,"name":"neuronopathy, distal hereditary motor, autosomal recessive 8","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:618912","UMLS:C5394466","DOID:0081427","MEDGEN:1714781"],"synonyms":[{"name":"SORDD","type":"exact"},{"name":"sorbitol dehydrogenase deficiency","type":"exact"},{"name":"sorbitol dehydrogenase deficiency with peripheral neuropathy","type":"exact"}],"termid":"MONDO:0030055","terms_by_termid":{"MONDO:0030055":null},"xrefs":{"Monarch":{"xref_id":"0030055"}}}


id: GO:0008315
data:
  {"annotated_genes":["SJAG_03854","SJAG_04287","SJAG_04280","SJAG_00364","SJAG_02771","SJAG_04332"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[106987,91793,116439],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0033315"},{"annotations":[78851,71003],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0110031"},{"annotations":[73917],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0110032"}]},"cv_name":"biological_process","definition":"The cell cycle process in which a cell progresses from meiotic G2 phase to M phase of meiosis I.","definition_xrefs":["PMID:15084480"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic cell cycle phase transition","termid":"GO:0044771"},{"relation_name":"is_a","term_name":"cell cycle G2/M phase transition","termid":"GO:0044839"},{"relation_name":"is_a","term_name":"meiosis I cell cycle process","termid":"GO:0061982"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00364":null,"SJAG_02771":null,"SJAG_03854":null,"SJAG_04280":null,"SJAG_04287":null,"SJAG_04332":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"G2/MI transition of meiotic cell cycle","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"meiotic G2/MI phase transition","type":"exact"},{"name":"meiotic G2/MI transition","type":"exact"},{"name":"meiotic cell cycle G2/MI phase transition","type":"exact"}],"termid":"GO:0008315","terms_by_termid":{"GO:0033315":null,"GO:0110031":null,"GO:0110032":null}}


id: PBO:0084336
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Kinetochore-associated protein; required for chromosome segregation and kinetochore clustering; required for normal segregation of chromosomes in meiosis and mitosis; component of the FEAR regulatory network, which promotes Cdc14p release from the nucleolus during anaphase; potential Cdc28p substrate","termid":"PBO:0084336"}


id: FYPO:0003974
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which one or more clusters of nuclear pores, associated with membrane fragments derived from the nuclear envelope, are present in the cytoplasm.","definition_xrefs":["PomBase:mah","PMID:7877997"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal nuclear pore localization","termid":"FYPO:0003973"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"nuclear pore aggregation in cytoplasm","synonyms":[{"name":"NPC aggregation in cytoplasm","type":"exact"},{"name":"aggregated nuclear pores present in cytoplasm","type":"exact"},{"name":"nuclear pore aggregation in cytoplasm during mitotic cell cycle","type":"related"},{"name":"nuclear pore aggregation in cytoplasm during vegetative growth","type":"exact"},{"name":"nuclear pore complex aggregation in cytoplasm","type":"exact"}],"termid":"FYPO:0003974"}


id: PATO:0000466
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000466 none (obsolete PATO:0000466)","termid":"PATO:0000466"}


id: FYPO:0003015
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An inviable phenotype observed in the vegetative growth phase of the life cycle in which a cell lyses, i.e. the plasma membrane ruptures and cytoplasm is lost, during a cellular response to salt stress. Note that in fission yeast cell lysis, the integrity of the cell wall is also compromised.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vegetative cell lysis","termid":"FYPO:0000647"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000004","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"cell lysis during cellular response to salt stress","synonyms":[{"name":"cell lysis during cellular response to salt stress during mitotic cell cycle","type":"related"},{"name":"cell lysis during cellular response to salt stress during vegetative growth","type":"exact"},{"name":"cytolysis during cellular response to salt stress","type":"exact"},{"name":"inviable, lysed cell during cellular response to salt stress","type":"exact"},{"name":"lysed cell in response to salt stress","type":"exact"}],"termid":"FYPO:0003015"}


id: GO:1900910
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of olefin metabolic process.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of metabolic process","termid":"GO:0009893"},{"relation_name":"is_a","term_name":"regulation of olefin metabolic process","termid":"GO:1900908"},{"relation_name":"positively_regulates","term_name":"olefin metabolic process","termid":"GO:1900673"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of olefin metabolic process","synonyms":[{"name":"activation of olefin metabolic process","type":"narrow"},{"name":"activation of olefin metabolism","type":"narrow"},{"name":"positive regulation of olefin metabolism","type":"related"},{"name":"up regulation of olefin metabolic process","type":"exact"},{"name":"up regulation of olefin metabolism","type":"related"},{"name":"up-regulation of olefin metabolic process","type":"exact"},{"name":"up-regulation of olefin metabolism","type":"related"},{"name":"upregulation of olefin metabolic process","type":"exact"},{"name":"upregulation of olefin metabolism","type":"related"}],"termid":"GO:1900910"}


id: PBO:0057014
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 103b-1","termid":"PBO:0057014"}


id: MONDO:0022552
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Crouzon syndrome","termid":"MONDO:0007405"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"Bazopoulou Kyrkanidou syndrome","secondary_identifiers":["GARD:839","MESH:C537664","MEDGEN:444091","UMLS:C2931580"],"termid":"MONDO:0022552","xrefs":{"Monarch":{"xref_id":"0022552"}}}


id: GO:0004627
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: phosphatidylcholine + H2O = 1-acylglycerophosphocholine + a fatty acid anion.","definition_xrefs":["EC:3.1.1.4"],"gene_count":0,"genotype_count":0,"name":"obsolete calcium-dependent cytosolic phospholipase A2 activity (obsolete GO:0004627)","synonyms":[{"name":"calcium-dependent cytosolic phospholipase A2 activity","type":"exact"}],"termid":"GO:0004627"}


id: MONDO:0017917
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, genetic, complex hereditary spastic paraplegia disorder characterized by adulthood-onset of slowly progressive, bilateral, mainly lower limb spasticity and distal weakness associated with lower limb pain, hyperreflexia, and reduced vibration sense. Axonal neuropathy is frequently observed on electromyography and nerve conduction examination.","definition_xrefs":["Orphanet:320360"],"direct_ancestors":[{"relation_name":"is_a","term_name":"complex hereditary spastic paraplegia","termid":"MONDO:0015150"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"maternally-inherited spastic paraplegia","secondary_identifiers":["GARD:21433","MEDGEN:1663227","UMLS:C4755299"],"synonyms":[{"name":"MT-ATP6-related mitochondrial spastic paraplegia","type":"exact"},{"name":"maternally-inherited SPG","type":"exact"}],"termid":"MONDO:0017917","xrefs":{"Monarch":{"xref_id":"0017917"}}}


id: PBO:0028495
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_degradation_via_N-end_rule_pathway_during_vegetative_growth","termid":"PBO:0028495"}


id: PBO:0048754
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycerate kinase","termid":"PBO:0048754"}


id: PBO:0087979
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA ligase; required for tRNA splicing and for both splicing and translation of HAC1 mRNA in the UPR; has phosphodiesterase, polynucleotide kinase, and ligase activities; involved in turnover of tRNA introns; localized at the inner nuclear envelope and cytoplasm","termid":"PBO:0087979"}


id: FYPO:0006191
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the nucleus is decreased, and some of the protein is present in the cytoplasm instead, during mitosis.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to nucleus, with protein mislocalized to cytoplasm","termid":"FYPO:0004056"},{"relation_name":"is_a","term_name":"decreased protein localization to nucleus during mitosis","termid":"FYPO:0005672"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased protein localization to nucleus, with protein mislocalized to cytoplasm during mitosis","synonyms":[{"name":"decreased protein localisation to nucleus, with protein mislocalised to cytoplasm during mitosis","type":"exact"},{"name":"decreased protein localization in nucleus, with protein mislocalized to cytoplasm during mitosis","type":"exact"},{"name":"decreased protein localization to nucleus, with protein mislocalized to cytoplasm, during mitosis during vegetative growth","type":"exact"},{"name":"decreased protein localization to nucleus, with protein mislocalized to cytoplasm, during mitotic nuclear division","type":"exact"},{"name":"reduced protein localization to nucleus, with protein mislocalized to cytoplasm during mitosis","type":"exact"}],"termid":"FYPO:0006191"}


id: MONDO:0010406
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"non-syndromic X-linked intellectual disability","termid":"MONDO:0019181"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome Xp11.22 duplication syndrome","secondary_identifiers":["DOID:0112037","MEDGEN:208679","DECIPHER:90","UMLS:C0796238","OMIM:300705","GARD:22683"],"synonyms":[{"name":"Xp11.22 microduplication syndrome","type":"exact"},{"name":"Xp11.22-linked intellectual disability","type":"exact"},{"name":"chromosome Xp11.22 duplication syndrome","type":"exact"},{"name":"intellectual disability, X-linked 17","type":"related"},{"name":"intellectual disability, X-linked 31","type":"related"},{"name":"mental retardation, X-linked 17","type":"related"},{"name":"mental retardation, X-linked 31","type":"related"}],"termid":"MONDO:0010406","xrefs":{"Monarch":{"xref_id":"0010406"}}}


id: PBO:0082440
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"B-type cyclin involved in cell cycle progression; activates Cdc28p to promote the transition from G2 to M phase; accumulates during G2 and M, then targeted via a destruction box motif for ubiquitin-mediated degradation by the proteasome; CLB1 has a paralog, CLB2, that arose from the whole genome duplication","termid":"PBO:0082440"}


id: PR:O13818
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC19A8.02 gene.","definition_xrefs":["UniProtKB:O13818","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized PH domain-containing protein C19A8.02 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC19A8.02","synonyms":[{"name":"Spom972h-SPAC19A8.02","type":"exact"}],"termid":"PR:O13818"}


id: PBO:0027036
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_duration_of_mitotic_spindle_disassembly","termid":"PBO:0027036"}


id: PBO:0086223
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that forms a complex with Thp3p; may have a role in transcription elongation and/or mRNA splicing; identified as a COP9 signalosome component but phenotype and interactions suggest it may not be involved with the signalosome","termid":"PBO:0086223"}


id: PBO:0040127
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat and SOCS box containing 13","termid":"PBO:0040127"}


id: PBO:0004928
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi transport complex subunit Cog3 (predicted)","termid":"PBO:0004928"}


id: PBO:0048659
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GK intronic transcript 1","termid":"PBO:0048659"}


id: PBO:0064521
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase III subunit B","termid":"PBO:0064521"}


id: GO:0005080
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to protein kinase C.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein kinase binding","termid":"GO:0019901"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"protein kinase C binding","secondary_identifiers":["GO:0097024","GO:0072568","GO:0072569"],"synonyms":[{"name":"PKC alpha binding","type":"exact"},{"name":"PKC binding","type":"exact"},{"name":"PKC delta binding","type":"exact"},{"name":"PKC eta binding","type":"exact"},{"name":"protein kinase C alpha binding","type":"narrow"},{"name":"protein kinase C delta binding","type":"narrow"},{"name":"protein kinase C eta binding","type":"narrow"}],"termid":"GO:0005080"}


id: PBO:0030676
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cell_size","termid":"PBO:0030676"}


id: MONDO:0010753
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital tricuspid malformation","termid":"MONDO:0020289"},{"relation_name":"is_a","term_name":"cardiogenetic disease","termid":"MONDO:0100547"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"cardiac valvular dysplasia, X-linked","secondary_identifiers":["MEDGEN:78083","MESH:C535576","OMIM:314400","Orphanet:1864","SCTID:718128009","GARD:1096","DOID:0111765","Orphanet:555877","UMLS:C0262436"],"synonyms":[{"name":"CVD1","type":"exact"},{"name":"XMVD","type":"exact"},{"name":"cardiac valvular dysplasia, X-linked","type":"exact"},{"name":"congenital valvular dysplasia","type":"exact"},{"name":"myxomatous valvular dystrophy, X-linked","type":"exact"},{"name":"valvular heart disease, congenital","type":"exact"}],"termid":"MONDO:0010753","xrefs":{"Monarch":{"xref_id":"0010753"}}}


id: GO:0042440
data:
  {"annotated_genes":["SJAG_01155","SJAG_03862","SJAG_00626","SJAG_00699","SJAG_00097","SJAG_01192","SJAG_03961","SJAG_01786","SJAG_04515","SJAG_01841","SJAG_05283","SJAG_04984","SJAG_00366","SJAG_01372","SJAG_04397","SJAG_04109","SJAG_02896","SJAG_04944","SJAG_03173","SJAG_02876"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[78729,80419],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006784"},{"annotations":[98583,100606,74724,101453,105563,112257,114257],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006783"},{"annotations":[106973],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042167"},{"annotations":[80289,63044,57244,67811,63182,59216,60294,64868],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006782"},{"annotations":[71784,77166],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019354"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving pigment, any general or particular coloring matter in living organisms, e.g. melanin.","definition_xrefs":["ISBN:0198506732","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic process","termid":"GO:0008152"}],"gene_count":20,"genes_by_uniquename":{"SJAG_00097":null,"SJAG_00366":null,"SJAG_00626":null,"SJAG_00699":null,"SJAG_01155":null,"SJAG_01192":null,"SJAG_01372":null,"SJAG_01786":null,"SJAG_01841":null,"SJAG_02876":null,"SJAG_02896":null,"SJAG_03173":null,"SJAG_03862":null,"SJAG_03961":null,"SJAG_04109":null,"SJAG_04397":null,"SJAG_04515":null,"SJAG_04944":null,"SJAG_04984":null,"SJAG_05283":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pigment metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000107":null},"synonyms":[{"name":"pigment metabolism","type":"exact"}],"termid":"GO:0042440","terms_by_termid":{"GO:0006782":null,"GO:0006783":null,"GO:0006784":null,"GO:0019354":null,"GO:0042167":null}}


id: PBO:0000479
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"E3 ubiquitin ligase complex subunit Mms1 (predicted)","termid":"PBO:0000479"}


id: MONDO:0008585
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A life-threatening condition that can potentially complicate pregnancy. It is named for 3 features of the condition: H emolysis, E levated L iver enzyme levels, and L ow P latelet levels. It typically occurs in the last 3 months of pregnancy (the third trimester) but can also start soon after delivery. A wide range of non-specific symptoms may be present in women with HELLP syndrome. Symptoms may include fatigue; malaise; fluid retention and excess weight gain; headache; nausea and vomiting; pain in the upper right or middle of the abdomen; blurry vision; and rarely, nosebleed or seizures. The cause of HELLP syndrome is not known, but certain risk factors have been associated with the condition. It is most common in women with preeclampsia or eclampsia. If not diagnosed and treated quickly, HELLP syndrome can lead to serious complications for the mother and baby.The main treatment is to deliver the baby as soon as possible, even if premature. Treatment may also include medications needed for the mother or baby, and blood transfusion for severe bleeding problems.","direct_ancestors":[{"relation_name":"is_a","term_name":"severe pre-eclampsia","termid":"MONDO:0001641"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HELLP syndrome","secondary_identifiers":["MEDGEN:58162","MESH:D017359","NCIT:C84750","Orphanet:244242","UMLS:C0162739","icd11.foundation:1748922908","DOID:13133","EFO:0007297","MedDRA:10049058","GARD:8528"],"synonyms":[{"name":"PEE1","type":"related"},{"name":"PREECLAMPSIA/eclampsia 1","type":"related"},{"name":"PREG1","type":"related"},{"name":"hemolysis, elevated liver enzymes, and low platelet count","type":"related"},{"name":"hemolysis, elevated liver enzymes, low platelets in pregnancy","type":"exact"},{"name":"hemolysis, elevated liver enzymes, lowered platelets","type":"related"},{"name":"hemolysis-elevated liver enzymes-low platelet count syndrome","type":"exact"},{"name":"hemolysis-elevated liver enzymes-low platelets syndrome","type":"exact"},{"name":"hypertension, pregnancy-induced","type":"related"},{"name":"toxaemia of pregnancy","type":"related"},{"name":"toxemia of pregnancy","type":"related"}],"termid":"MONDO:0008585","xrefs":{"Monarch":{"xref_id":"0008585"}}}


id: GO:2000532
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of renal albumin absorption.","definition_xrefs":["GOC:obol","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of renal system process","termid":"GO:0098801"},{"relation_name":"regulates","term_name":"renal albumin absorption","termid":"GO:0097018"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of renal albumin absorption","termid":"GO:2000532"}


id: PR:Q9P5N0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- abc3 gene.","definition_xrefs":["UniProtKB:Q9P5N0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-binding cassette transporter abc3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC359.05","synonyms":[{"name":"Spom972h-abc3","type":"exact"}],"termid":"PR:Q9P5N0"}


id: GO:0019098
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The specific behavior of an organism that is associated with reproduction.","definition_xrefs":["GOC:jl","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"behavior","termid":"GO:0007610"},{"relation_name":"is_a","term_name":"multicellular organismal reproductive process","termid":"GO:0048609"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"reproductive behavior","secondary_identifiers":["GO:0033057","GO:0044705","GO:0044704"],"synonyms":[{"name":"multi-organism reproductive behavior","type":"narrow"},{"name":"multicellular organism reproductive behavior","type":"narrow"},{"name":"reproductive behavior in a multicellular organism","type":"exact"},{"name":"reproductive behaviour","type":"exact"},{"name":"single-organism reproductive behavior","type":"related"}],"termid":"GO:0019098"}


id: GO:0071040
data:
  {"annotated_genes":["SJAG_01176","SJAG_01717","SJAG_03745"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[71293,88732,106642],"is_not":false,"summary":null,"term":"GO:0071040"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways occurring in the nucleus and resulting in the breakdown of an antisense transcript, initiated by the enzymatic addition of a sequence of adenylyl residues (polyadenylation) at the 3' end the target antisense transcript.","definition_xrefs":["GOC:krc","GOC:dgf","PMID:18022365"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antisense RNA transcript catabolic process","termid":"GO:0071041"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01176":null,"SJAG_01717":null,"SJAG_03745":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nuclear polyadenylation-dependent antisense transcript catabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"nuclear poly(A)-dependent antisense transcript catabolic process","type":"related"}],"termid":"GO:0071040","terms_by_termid":{"GO:0071040":null}}


id: GO:0002772
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by an extracellular ligand binding to an inhibitory C-type lectin receptor capable of inhibiting an immune effector process contributing to an immune response.","definition_xrefs":["GOC:add","PMID:15771571","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune response-inhibiting cell surface receptor signaling pathway","termid":"GO:0002767"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"inhibitory C-type lectin receptor signaling pathway","synonyms":[{"name":"Ly49 inhibitory receptor signaling pathway","type":"related"},{"name":"inhibitory C-type lectin receptor signalling pathway","type":"exact"}],"termid":"GO:0002772"}


id: PBO:0049610
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H3 histone pseudogene 13","termid":"PBO:0049610"}


id: PR:Q09903
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ddx27 gene.","definition_xrefs":["UniProtKB:Q09903","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase drs1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC30D11.03","synonyms":[{"name":"Spom972h-ddx27","type":"exact"}],"termid":"PR:Q09903"}


id: MONDO:0011013
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal dominant hypocalcemia in which the cause of the disease is a mutation in the CASR gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant hypocalcemia","termid":"MONDO:0018543"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0000426"],"is_obsolete":false,"name":"autosomal dominant hypocalcemia 1","secondary_identifiers":["DOID:0090107","MEDGEN:87438","UMLS:C0342345","OMIM:601198"],"synonyms":[{"name":"CASR autosomal dominant hypocalcemia","type":"exact"},{"name":"HYPOC1","type":"exact"},{"name":"autosomal dominant hypocalcemia caused by mutation in CASR","type":"exact"},{"name":"autosomal dominant hypocalcemia type 1","type":"exact"},{"name":"hypercalciuric hypocalcemia","type":"related"},{"name":"hypocalcemia, autosomal dominant","type":"broad"},{"name":"hypocalcemia, autosomal dominant 1","type":"related"},{"name":"hypocalcemia, autosomal dominant 1, with Bartter syndrome","type":"related"},{"name":"hypocalcemia, autosomal dominant type 1","type":"exact"},{"name":"hypocalcemia, autosomal dominant, with Bartter syndrome","type":"exact"},{"name":"hypocalcemia, familial","type":"related"}],"termid":"MONDO:0011013","xrefs":{"Monarch":{"xref_id":"0011013"}}}


id: PBO:0084725
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial inner membrane protein; required for proteolytic processing of Cox2p and its assembly into cytochrome c oxidase","termid":"PBO:0084725"}


id: MOD:00001
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom with an alkyl group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification categorized by chemical process","termid":"MOD:01156"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alkylated residue","synonyms":[{"name":"AlkylRes","type":"exact"}],"termid":"MOD:00001"}


id: PATO:0000211
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000211 muscle function (obsolete PATO:0000211)","termid":"PATO:0000211"}


id: GO:1901510
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving (-)-microperfuranone.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ether metabolic process","termid":"GO:0018904"},{"relation_name":"is_a","term_name":"lactone metabolic process","termid":"GO:1901334"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"(-)-microperfuranone metabolic process","synonyms":[{"name":"(-)-microperfuranone metabolism","type":"exact"}],"termid":"GO:1901510"}


id: MONDO:0001076
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The inability to regulate blood glucose levels resulting in hyperglycemia.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucose metabolism disease","termid":"MONDO:0002908"},{"relation_name":"is_a","term_name":"glucose-galactose malabsorption","termid":"MONDO:0011731"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0037792"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0037792","MONDO:0004335"],"is_obsolete":false,"name":"glucose intolerance","secondary_identifiers":["ICD9:271.3","MESH:D018149","DOID:10603","icd11.foundation:1392580302","MEDGEN:75760","SCTID:267426009","UMLS:C0271650","NCIT:C34646"],"synonyms":[{"name":"glucose: [intolerance] or [malabsorption]","type":"exact"},{"name":"glucose: intolerance","type":"exact"},{"name":"glucose: malabsorption","type":"exact"},{"name":"malabsorption of glucose","type":"exact"}],"termid":"MONDO:0001076","xrefs":{"Monarch":{"xref_id":"0001076"}}}


id: MONDO:0021902
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, congenital anomaly in the aorta in which a communication exists between the ascending aorta and the pulmonary artery.","definition_xrefs":["NCIT:C101050"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heart disorder","termid":"MONDO:0005267"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"aortopulmonary window","secondary_identifiers":["MESH:D001028","NANDO:2100082","SCTID:17024001","NANDO:2200262","UMLS:C0003516","HP:0011604","MEDGEN:365"],"synonyms":[{"name":"AP window","type":"exact"},{"name":"APSD","type":"exact"},{"name":"APW","type":"exact"},{"name":"aortic-pulmonary window","type":"related"},{"name":"aorto-pulmonary window","type":"related"},{"name":"aortopulmonary septal defect","type":"exact"},{"name":"aortopulmonary window","type":"exact"}],"termid":"MONDO:0021902","xrefs":{"Monarch":{"xref_id":"0021902"}}}


id: GO:0000162
data:
  {"annotated_genes":["SJAG_05007","SJAG_01455","SJAG_02505","SJAG_03167"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[73671,74615,77573,79599],"is_not":false,"summary":null,"term":"GO:0000162"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of L-tryptophan, the chiral amino acid 2-amino-3-(1H-indol-3-yl)propanoic acid; L-tryptophan is synthesized from chorismate via anthranilate.","definition_xrefs":["ISBN:0471331309","GOC:mah","MetaCyc:TRPSYN-PWY"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-tryptophan metabolic process","termid":"GO:0006568"},{"relation_name":"is_a","term_name":"aromatic amino acid family biosynthetic process","termid":"GO:0009073"},{"relation_name":"is_a","term_name":"indolalkylamine biosynthetic process","termid":"GO:0046219"},{"relation_name":"is_a","term_name":"erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process","termid":"GO:1902223"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01455":null,"SJAG_02505":null,"SJAG_03167":null,"SJAG_05007":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006520","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"L-tryptophan biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["GO:0009096"],"synonyms":[{"name":"L-tryptophan anabolism","type":"exact"},{"name":"L-tryptophan biosynthesis","type":"exact"},{"name":"aromatic amino acid family biosynthetic process, anthranilate pathway","type":"exact"},{"name":"tryptophan biosynthetic process","type":"related"},{"name":"tryptophan formation","type":"exact"},{"name":"tryptophan synthesis","type":"related"}],"termid":"GO:0000162","terms_by_termid":{"GO:0000162":null}}


id: PBO:0047978
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FSHD region gene 1 family member E, pseudogene","termid":"PBO:0047978"}


id: PBO:0043646
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COP9 signalosome subunit 6","termid":"PBO:0043646"}


id: PBO:0074414
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small integral membrane protein 15","termid":"PBO:0074414"}


id: PBO:0073703
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SKI proto-oncogene","termid":"PBO:0073703"}


id: MONDO:0014870
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"NEK9-related lethal skeletal dysplasia is a rare, lethal, primary bone dysplasia characterized by fetal akinesia, multiple contractures, shortening of all long bones, short, broad ribs, narrow chest and thorax, pulmonary hypoplasia and a protruding abdomen. Short bowed femurs may also be associated.","definition_xrefs":["Orphanet:464366"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thoracic malformation","termid":"MONDO:0015929"},{"relation_name":"is_a","term_name":"lethal congenital contracture syndrome","termid":"MONDO:0017436"},{"relation_name":"is_a","term_name":"short rib dysplasia","termid":"MONDO:0019691"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NEK9-related lethal skeletal dysplasia","secondary_identifiers":["OMIM:617022","UMLS:C5568141","GARD:17818","MEDGEN:1799564"],"synonyms":[{"name":"LCCS10","type":"exact"},{"name":"lethal congenital contracture syndrome 10","type":"exact"},{"name":"lethal congenital contracture syndrome type 10","type":"exact"},{"name":"lethal skeletal dysplasia-fetal akinesia-contractures-thoracic dysplasia-pulmonary hypoplasia syndrome","type":"exact"}],"termid":"MONDO:0014870","xrefs":{"Monarch":{"xref_id":"0014870"}}}


id: FYPO:0003143
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of protein measured in a cell during a cellular response to methyl methanesulfonate is lower than normal. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein level during vegetative growth","termid":"FYPO:0001324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0006551","FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"decreased protein level during cellular response to methyl methanesulfonate","synonyms":[{"name":"decreased protein accumulation during cellular response to methyl methanesulfonate","type":"related"},{"name":"decreased protein level during cellular response to MMS","type":"exact"},{"name":"decreased protein level during cellular response to methyl methanesulfonate during mitotic cell cycle","type":"related"},{"name":"decreased protein level during cellular response to methyl methanesulfonate during vegetative growth","type":"exact"},{"name":"decreased protein level during cellular response to methyl methanesulphonate","type":"exact"},{"name":"reduced protein level during cellular response to methyl methanesulfonate","type":"exact"}],"termid":"FYPO:0003143"}


id: MONDO:1011449
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Immunoglobulin A glomerulonephropathy that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glomerulonephritis, non-human animal","termid":"MONDO:1010258"},{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin A glomerulonephropathy, non-human animal","secondary_identifiers":["OMIA:000553"],"termid":"MONDO:1011449","xrefs":{"Monarch":{"xref_id":"1011449"}}}


id: PBO:0070722
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L9 pseudogene 27","termid":"PBO:0070722"}


id: PR:Q9UTF8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ugo1 gene.","definition_xrefs":["UniProtKB:Q9UTF8","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial fusion and transport protein ugo1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1B2.02c","synonyms":[{"name":"Spom972h-ugo1","type":"exact"}],"termid":"PR:Q9UTF8"}


id: MONDO:0013052
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any retinitis pigmentosa in which the cause of the disease is a mutation in the KLHL7 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinitis pigmentosa","termid":"MONDO:0019200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0005066","MONDO:0004736"],"is_obsolete":false,"name":"retinitis pigmentosa 42","secondary_identifiers":["OMIM:612943","DOID:0110386","GARD:15593","UMLS:C2751986","ICD10CM:H35.5","MEDGEN:442864","MESH:C567854"],"synonyms":[{"name":"KLHL7 retinitis pigmentosa","type":"exact"},{"name":"RP42","type":"exact"},{"name":"retinitis pigmentosa 42","type":"exact"},{"name":"retinitis pigmentosa caused by mutation in KLHL7","type":"exact"},{"name":"retinitis pigmentosa type 42","type":"exact"}],"termid":"MONDO:0013052","xrefs":{"Monarch":{"xref_id":"0013052"}}}


id: MONDO:0018383
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An instance of osteonecrosis that is caused by a modification of the individual's genome.","definition_xrefs":["MONDO:patterns/genetic"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"osteonecrosis","termid":"MONDO:0005380"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"osteonecrosis of genetic origin","secondary_identifiers":["GARD:21667","UMLS:C5680035","MEDGEN:1842788","Orphanet:399380"],"synonyms":[{"name":"bone necrosis of genetic origin","type":"exact"},{"name":"genetic osteonecrosis","type":"exact"}],"termid":"MONDO:0018383","xrefs":{"Monarch":{"xref_id":"0018383"}}}


id: GO:0035430
data:
  {"annotated_genes":["SJAG_04920"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90289],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035432"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the directed movement of a gluconate across a membrane by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of organic acid transport","termid":"GO:0032890"},{"relation_name":"is_a","term_name":"regulation of transmembrane transport","termid":"GO:0034762"},{"relation_name":"regulates","term_name":"gluconate transmembrane transport","termid":"GO:0035429"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04920":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"regulation of gluconate transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0032893"],"synonyms":[{"name":"regulation of gluconate membrane transport","type":"exact"},{"name":"regulation of gluconate transport","type":"related"}],"termid":"GO:0035430","terms_by_termid":{"GO:0035432":null}}


id: PBO:0044115
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cancer/testis antigen 1B","termid":"PBO:0044115"}


id: FYPO:0005584
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more diglycerides measured in a cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased level of substance in cell during vegetative growth","termid":"FYPO:0001329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"decreased cellular diglyceride level","synonyms":[{"name":"decreased cellular DAG level","type":"exact"},{"name":"decreased cellular diacylglycerol level","type":"exact"},{"name":"decreased cellular diglyceride level during mitotic cell cycle","type":"related"},{"name":"decreased cellular diglyceride level during vegetative growth","type":"exact"},{"name":"decreased diglyceride accumulation","type":"related"},{"name":"reduced cellular diglyceride level","type":"exact"}],"termid":"FYPO:0005584"}


id: GO:1901331
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of odontoblast differentiation.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of odontoblast differentiation","termid":"GO:1901329"},{"relation_name":"is_a","term_name":"positive regulation of neuroepithelial cell differentiation","termid":"GO:1902913"},{"relation_name":"positively_regulates","term_name":"odontoblast differentiation","termid":"GO:0071895"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of odontoblast differentiation","synonyms":[{"name":"activation of odontoblast differentiation","type":"narrow"},{"name":"up regulation of odontoblast differentiation","type":"exact"},{"name":"up-regulation of odontoblast differentiation","type":"exact"},{"name":"upregulation of odontoblast differentiation","type":"exact"}],"termid":"GO:1901331"}


id: PBO:0070514
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L6 pseudogene 13","termid":"PBO:0070514"}


id: MOD:00903
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that modifies an L-asparagine residue.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification categorized by amino acid modified","termid":"MOD:01157"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"modified L-asparagine residue","synonyms":[{"name":"ModAsn","type":"exact"}],"termid":"MOD:00903"}


id: GO:0034691
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An integrin complex that comprises one alphaE subunit and one beta7 subunit.","definition_xrefs":["PMID:12297042"],"direct_ancestors":[{"relation_name":"is_a","term_name":"integrin complex","termid":"GO:0008305"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005886","GO:0032991"],"is_obsolete":false,"name":"integrin alphaE-beta7 complex","synonyms":[{"name":"Itgae-Itgb7 complex","type":"narrow"}],"termid":"GO:0034691"}


id: GO:0019233
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events required for an organism to receive a painful stimulus, convert it to a molecular signal, and recognize and characterize the signal. A painful stimulus is any physical or chemical event that has the potential to cause tissue damage (actual or perceived) and activates the nociceptive system.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensory perception","termid":"GO:0007600"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sensory perception of pain","secondary_identifiers":["Wikipedia:Nociception"],"synonyms":[{"name":"nociception","type":"related"},{"name":"perception of physiological pain","type":"narrow"}],"termid":"GO:0019233"}


id: GO:0005463
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a N-acetylgalactosamine from one side of a membrane to the other. N-acetylgalactosamine is a substance composed of N-acetylgalactosamine, a common structural unit of oligosaccharides, in glycosidic linkage with uridine diphosphate.","definition_xrefs":["GOC:ai","GOC:mtg_transport","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleotide-sugar transmembrane transporter activity","termid":"GO:0015165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"UDP-N-acetylgalactosamine transmembrane transporter activity","termid":"GO:0005463"}


id: GO:0008142
data:
  {"annotated_genes":["SJAG_01590","SJAG_00355","SJAG_02323","SJAG_01722","SJAG_02375","SJAG_03718"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[71383,72594,94613,108585,111714,116605],"is_not":false,"summary":null,"term":"GO:0008142"}]},"cv_name":"molecular_function","definition":"Binding to oxysterol, an oxidized form of cholesterol.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sterol binding","termid":"GO:0032934"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00355":null,"SJAG_01590":null,"SJAG_01722":null,"SJAG_02323":null,"SJAG_02375":null,"SJAG_03718":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0008289"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0008289"],"is_obsolete":false,"name":"oxysterol binding","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0008142","terms_by_termid":{"GO:0008142":null}}


id: GO:1903193
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of sesquarterpene.","definition_xrefs":["GOC:TermGenie","PMID:21627333","GO_REF:0000068","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terpene biosynthetic process","termid":"GO:0046246"},{"relation_name":"is_a","term_name":"sesquarterpene metabolic process","termid":"GO:1903192"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"sesquarterpene biosynthetic process","synonyms":[{"name":"sesquarterpene anabolism","type":"exact"},{"name":"sesquarterpene biosynthesis","type":"exact"},{"name":"sesquarterpene formation","type":"exact"},{"name":"sesquarterpene synthesis","type":"exact"}],"termid":"GO:1903193"}


id: MONDO:0957780
data:
  {"annotated_genes":["SJAG_00824"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86585],"is_not":false,"summary":null,"term":"MONDO:0957780"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"developmental and epileptic encephalopathy","termid":"MONDO:0100062"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00824":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"},{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0700092","MONDO:0005027"],"is_obsolete":false,"name":"developmental and epileptic encephalopathy 111","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:620504","MEDGEN:1846991","UMLS:C5882690"],"termid":"MONDO:0957780","terms_by_termid":{"MONDO:0957780":null},"xrefs":{"Monarch":{"xref_id":"0957780"}}}


id: PBO:0113469
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of TORC1-stimulating GTPase and EGO/GSE complex; subunit of Gtr1-Gtr2 GTPase that activates TORC1 in response to amino acid stimulation; subunit of EGO/GSE vacuolar membrane complex that regulates exit from rapamycin-induced growth arrest and sorting of Gap1p; involved in phosphate transport, telomeric chromatin silencing and oxidative stress response; activated by Iml1p (GAP) subunit of SEACIT complex; targeted to vacuole via AP-3 pathway; similar to human RagA and RagB","termid":"PBO:0113469"}


id: GO:0031449
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of slow-twitch skeletal muscle contraction.","definition_xrefs":["GOC:mtg_muscle","GOC:mah","GOC:tb","GOC:dph","GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of twitch skeletal muscle contraction","termid":"GO:0014724"},{"relation_name":"regulates","term_name":"slow-twitch skeletal muscle fiber contraction","termid":"GO:0031444"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of slow-twitch skeletal muscle fiber contraction","synonyms":[{"name":"regulation of slow-twitch skeletal muscle contraction","type":"exact"}],"termid":"GO:0031449"}


id: MONDO:0032934
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"genitourinary and/or brain malformation syndrome","secondary_identifiers":["OMIM:618820","MEDGEN:1720440","UMLS:C5394158"],"synonyms":[{"name":"GENITOURINARY AND/OR BRAIN MALFORMATION SYNDROME","type":"related"},{"name":"GUB syndrome","type":"exact"},{"name":"GUBS","type":"related"},{"name":"UBM syndrome","type":"exact"},{"name":"UBMS","type":"exact"},{"name":"Urogenital and/or brain malformation syndrome","type":"exact"},{"name":"genitourinary and/or brain malformation syndrome","type":"exact"},{"name":"genitourinary and/or/brain malformation syndrome","type":"exact"}],"termid":"MONDO:0032934","xrefs":{"Monarch":{"xref_id":"0032934"}}}


id: GO:0097242
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which amyloid-beta is removed from extracellular brain regions by mechanisms involving cell surface receptors.","definition_xrefs":["GOC:bc","PMID:18289866","PMID:26005850","GOC:BHF","PMID:19098903","GOC:aruk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal process","termid":"GO:0032501"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"amyloid-beta clearance","synonyms":[{"name":"beta-amyloid clearance","type":"exact"}],"termid":"GO:0097242"}


id: PR:Q9P7G8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A UPF0382 inner membrane protein YgdD that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01977","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0382 membrane protein C1782.12c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1782.12c","secondary_identifiers":["UniProtKB:Q9P7G8"],"synonyms":[{"name":"Spom972h-ygdD","type":"exact"}],"termid":"PR:Q9P7G8"}


id: MONDO:0957255
data:
  {"annotated_genes":["SJAG_00133"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86916],"is_not":false,"summary":null,"term":"MONDO:0957255"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial proton-transporting ATP synthase complex deficiency","termid":"MONDO:0014471"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00133":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004069"],"is_obsolete":false,"name":"mitochondrial complex V (ATP synthase) deficiency, nuclear type 7","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:620359","MEDGEN:1841118","UMLS:C5830482","DOID:0070464"],"termid":"MONDO:0957255","terms_by_termid":{"MONDO:0957255":null},"xrefs":{"Monarch":{"xref_id":"0957255"}}}


id: PBO:0113131
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Exocyst subunit with dual roles in exocytosis and spliceosome assembly; subunit of the the exocyst complex which mediates polarized targeting and tethering of post-Golgi secretory vesicles to active sites of exocytosis at the plasma membrane (PM) prior to SNARE-mediated fusion; required for exocyst assembly and targeting of the complex to specific sites on the bud tip PM; associates the U1 snRNP; role in pre-mRNA splicing and prespliceosome formation; possible Cdc28 substrate","termid":"PBO:0113131"}


id: PBO:0086669
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; identified by fungal homology and RT-PCR; SWAT-GFP and mCherry fusion proteins localize to the endoplasmic reticulum","termid":"PBO:0086669"}


id: PBO:0082396
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Beta subunit of geranylgeranyltransferase type I; subunit of the Ram2p-Cdc43p heterodimer that catalyzes the geranylgeranylation of the cysteine residue in proteins containing a C-terminal CaaX sequence ending in Leu or Phe; has substrates important for morphogenesis","termid":"PBO:0082396"}


id: GO:0043707
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The attachment of a cell to either a host cell or a microbial cell of the same species, or to an underlying host substrate, such as the extracellular matrix, via cell adhesion molecules, occurring during the formation of a biofilm in or on a host species.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell adhesion involved in single-species biofilm formation","termid":"GO:0043709"},{"relation_name":"part_of","term_name":"single-species biofilm formation in or on host organism","termid":"GO:0044407"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"cell adhesion involved in single-species biofilm formation in or on host organism","synonyms":[{"name":"cell adhesion during single-species biofilm formation in or on host organism","type":"related"}],"termid":"GO:0043707"}


id: PR:Q10186
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC3F10.12c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10186"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized bHLH domain-containing protein C3F10.12c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3F10.12c","synonyms":[{"name":"Spom972h-SPAC3F10.12c","type":"exact"}],"termid":"PR:Q10186"}


id: PBO:0059534
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrially encoded transcription terminator","termid":"PBO:0059534"}


id: PBO:0087366
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sporulation-specific homolog of the CDC3/10/11/12 family of genes; septin protein involved in sporulation; regulated by ABFI; the yeast CDC3/10/11/12 family is a family of bud neck microfilament genes","termid":"PBO:0087366"}


id: FYPO:0004376
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which chromatin silencing at the silent mating-type cassettes is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromatin silencing at silent mating-type cassette","termid":"FYPO:0000156"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"increased chromatin silencing at silent mating-type cassette","synonyms":[{"name":"increased chromatin silencing at mating-type region heterochromatin","type":"exact"},{"name":"increased chromatin silencing at silent mating-type cassette during mitotic cell cycle","type":"related"},{"name":"increased chromatin silencing at silent mating-type cassette during vegetative growth","type":"exact"}],"termid":"FYPO:0004376"}


id: PBO:0060275
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin heavy chain 9","termid":"PBO:0060275"}


id: PBO:0001226
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Arv1-like family protein Arv1 (predicted)","termid":"PBO:0001226"}


id: GO:0045330
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the hydrolysis of an ester bond by a mechanism involving a catalytically active aspartic acid residue.","definition_xrefs":["GOC:mah","UniProtKB-KW:KW-0063"],"gene_count":0,"genotype_count":0,"name":"obsolete aspartyl esterase activity (obsolete GO:0045330)","termid":"GO:0045330"}


id: PBO:0084324
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Karyopherin/importin that interacts with the nuclear pore complex; acts as the nuclear import receptor for specific proteins, including Pdr1p, Yap1p, Ste12p, and Aft1p; required for stability of the Dam1p-Duo1p complex","termid":"PBO:0084324"}


id: PBO:0014618
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoside-triphosphatase involved in SSU-rRNA maturation Fap7 (predicted)","termid":"PBO:0014618"}


id: PBO:0055470
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2903","termid":"PBO:0055470"}


id: PBO:0039432
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ANK2 antisense RNA 1","termid":"PBO:0039432"}


id: PBO:0038430
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-1,4-N-acetylglucosaminyltransferase","termid":"PBO:0038430"}


id: GO:1903167
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of pyrroline-5-carboxylate reductase activity.","definition_xrefs":["GOC:TermGenie","GOC:bf","GOC:PARL","GO_REF:0000059"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of pyrroline-5-carboxylate reductase activity (obsolete GO:1903167)","synonyms":[{"name":"regulation of 1-pyrroline-5-carboxylate reductase activity","type":"exact"},{"name":"regulation of L-proline oxidase activity","type":"exact"},{"name":"regulation of L-proline-NAD(P)+ 5-oxidoreductase activity","type":"exact"},{"name":"regulation of L-proline:NAD(P)+ 5-oxidoreductase activity","type":"exact"},{"name":"regulation of NADPH-L-delta1-pyrroline carboxylic acid reductase activity","type":"exact"},{"name":"regulation of P5CR activity","type":"exact"}],"termid":"GO:1903167"}


id: FYPO:0001321
data:
  {"alleles_by_uniquename":{"SJAG_00028:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00028","name":"rga6delta","uniquename":"SJAG_00028:allele-1"},"SJAG_00118:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00118","name":"mid2delta","uniquename":"SJAG_00118:allele-1"},"SJAG_00266:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00266","name":"atf1delta","uniquename":"SJAG_00266:allele-1"},"SJAG_00409:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00409","name":"gpd1delta","uniquename":"SJAG_00409:allele-1"},"SJAG_00426:allele-1":{"allele_type":"amino_acid_mutation","description":"P363S","gene_uniquename":"SJAG_00426","name":"bbl1-P363S","uniquename":"SJAG_00426:allele-1"},"SJAG_00514:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00514","name":"scd1delta","uniquename":"SJAG_00514:allele-1"},"SJAG_00871:allele-1":{"allele_type":"amino_acid_mutation","description":"cut3-T19E","gene_uniquename":"SJAG_00871","name":"cut3-T19E","uniquename":"SJAG_00871:allele-1"},"SJAG_01143:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01143","name":"mid1delta","uniquename":"SJAG_01143:allele-1"},"SJAG_01745:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01745","name":"lem2delta","uniquename":"SJAG_01745:allele-1"},"SJAG_01794:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01794","name":"scd2delta","uniquename":"SJAG_01794:allele-1"},"SJAG_01834:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01834","name":"pom152delta","uniquename":"SJAG_01834:allele-1"},"SJAG_01906:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01906","name":"nem1delta","uniquename":"SJAG_01906:allele-1"},"SJAG_01956:allele-1":{"allele_type":"amino_acid_mutation","description":"E405K ts","gene_uniquename":"SJAG_01956","name":"nuc2-1051","uniquename":"SJAG_01956:allele-1"},"SJAG_02013:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02013","name":"pyp1delta","uniquename":"SJAG_02013:allele-1"},"SJAG_02392:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02392","name":"pom1delta","uniquename":"SJAG_02392:allele-1"},"SJAG_02592:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02592","name":"sty1delta","uniquename":"SJAG_02592:allele-1"},"SJAG_02621:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02621","name":"ago1delta","uniquename":"SJAG_02621:allele-1"},"SJAG_02763:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02763","name":"ned1delta","uniquename":"SJAG_02763:allele-1"},"SJAG_02763:allele-2":{"allele_type":"amino_acid_mutation","description":"D422E,D424E","gene_uniquename":"SJAG_02763","name":"ned1cat","synonyms":[{"name":"Catalytic mutant","reference":"PMID:26774782","type":"exact"}],"uniquename":"SJAG_02763:allele-2"},"SJAG_02763:allele-3":{"allele_type":"amino_acid_mutation","description":"S235A; S651","gene_uniquename":"SJAG_02763","name":"ned1S235A/S651","synonyms":[{"name":"refractory to phosphorylation","reference":"PMID:26774782","type":"exact"}],"uniquename":"SJAG_02763:allele-3"},"SJAG_02763:allele-4":{"allele_type":"amino_acid_mutation","description":"S235E; S651E","gene_uniquename":"SJAG_02763","name":"ned1S235E/S651E","synonyms":[{"name":"phosphomimetic","reference":"PMID:26774782","type":"exact"}],"uniquename":"SJAG_02763:allele-4"},"SJAG_02763:allele-5":{"allele_type":"amino_acid_mutation","description":"S499E; S538E; T620E; T638E; S651E","gene_uniquename":"SJAG_02763","name":"ned1-5E","uniquename":"SJAG_02763:allele-5"},"SJAG_02819:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02819","name":"efc25delta","uniquename":"SJAG_02819:allele-1"},"SJAG_03048:allele-1":{"allele_type":"amino_acid_mutation","description":"G146D","gene_uniquename":"SJAG_03048","name":"cdc2-1w","uniquename":"SJAG_03048:allele-1"},"SJAG_03118:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03118","name":"leo1delta","uniquename":"SJAG_03118:allele-1"},"SJAG_03250:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03250","name":"sst4delta","uniquename":"SJAG_03250:allele-1"},"SJAG_03351:allele-1":{"allele_type":"amino_acid_mutation","description":"A186T ts","gene_uniquename":"SJAG_03351","name":"cut23-415","uniquename":"SJAG_03351:allele-1"},"SJAG_03449:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03449","name":"man1delta","uniquename":"SJAG_03449:allele-1"},"SJAG_03449:allele-2":{"allele_type":"partial_amino_acid_deletion","description":"man1DHEH","gene_uniquename":"SJAG_03449","name":"Man1DHEH","uniquename":"SJAG_03449:allele-2"},"SJAG_03449:allele-3":{"allele_type":"amino_acid_insertion_and_deletion","description":"man1-1-488","gene_uniquename":"SJAG_03449","name":"man1-1-488","uniquename":"SJAG_03449:allele-3"},"SJAG_03453:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03453","name":"ras1delta","uniquename":"SJAG_03453:allele-1"},"SJAG_03575:allele-1":{"allele_type":"amino_acid_mutation","description":"E548K 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growth","references_by_uniquename":{"PMID:21802294":null,"PMID:23786411":null,"PMID:24184107":null,"PMID:25318672":null,"PMID:25866389":null,"PMID:26774782":null,"PMID:27678009":null,"PMID:28954740":null,"PMID:29566183":null,"PMID:30664646":null,"PMID:30726171":null,"PMID:31150379":null,"PMID:32109380":null,"PMID:34198697":null,"PMID:35226668":null,"PMID:36058798":null,"PMID:37164017":null},"single_locus_annotated_genes":["SJAG_01794","SJAG_03449","SJAG_03689","SJAG_00266","SJAG_04703","SJAG_04551","SJAG_04697","SJAG_00514","SJAG_04280","SJAG_03575","SJAG_03581","SJAG_02763","SJAG_02592","SJAG_00118","SJAG_00409","SJAG_02013","SJAG_01143","SJAG_03351","SJAG_01745","SJAG_03250","SJAG_00028","SJAG_04312","SJAG_03048","SJAG_04522","SJAG_02392","SJAG_03940","SJAG_00426","SJAG_01956","SJAG_03453","SJAG_01906","SJAG_04332","SJAG_02819","SJAG_01834","SJAG_04464"],"single_locus_genotype_uniquenames":["pmk1delta","efc25delta","wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type","wee1-G788E-G788E-amino_acid_mutation-expression-not_assayed_or_wild_type","pka1delta","mid1delta","ned1S235A_S651-S235A__S651-amino_acid_mutation-expression-not_assayed_or_wild_type","man1delta","lem2delta","pom1delta","cdc2-1w-G146D-amino_acid_mutation-expression-not_assayed_or_wild_type","scd2delta","gpd1delta","bbl1-P363S-P363S-amino_acid_mutation-expression-not_assayed_or_wild_type","sty1delta","ned1-5E-S499E__S538E__T620E__T638E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type","nem1delta","nem2delta","atf1delta","ned1S235E_S651E-S235E__S651E-amino_acid_mutation-expression-not_assayed_or_wild_type","ned1cat-D422E,D424E-amino_acid_mutation-expression-not_assayed_or_wild_type","Man1DHEH-man1DHEH-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","gms1delta","scd1delta","sst4delta","nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","man1-1-488-man1-1-488-amino_acid_insertion_and_deletion-expression-not_assayed_or_wild_type","pyp1delta","gef1delta","dcr1delta","pom152delta","ras1delta","for3delta","apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","mid2delta","ned1delta","rga6delta","cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type","pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type","rga4delta"],"synonyms":[{"name":"cellular physical object quality phenotype during vegetative growth","type":"exact"},{"name":"cellular physical quality phenotype during mitotic cell cycle","type":"related"},{"name":"fission yeast cellular physical object quality phenotype during vegetative growth","type":"exact"}],"termid":"FYPO:0001321","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000005":null,"FYECO:0000006":null,"FYECO:0000102":null,"FYECO:0000126":null,"FYECO:0000137":null,"FYECO:0000162":null,"FYECO:0000207":null,"FYECO:0000338":null,"FYPO:0000118":null,"FYPO:0000356":null,"FYPO:0000648":null,"FYPO:0001122":null,"FYPO:0001327":null,"FYPO:0001369":null,"FYPO:0001489":null,"FYPO:0001556":null,"FYPO:0001784":null,"FYPO:0001877":null,"FYPO:0002026":null,"FYPO:0002227":null,"FYPO:0002380":null,"FYPO:0003315":null,"FYPO:0003657":null,"FYPO:0003727":null,"FYPO:0003751":null,"FYPO:0003779":null,"FYPO:0003780":null,"FYPO:0003976":null,"FYPO:0004205":null,"FYPO:0004295":null,"FYPO:0004573":null,"FYPO:0004695":null,"FYPO:0004890":null,"FYPO:0004982":null,"FYPO:0006433":null,"FYPO:0006616":null,"FYPO:0007701":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null,"FYPO_EXT:0000003":null}}


id: PBO:0005765
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ku domain protein Pku70","termid":"PBO:0005765"}


id: PR:O74947
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC553.10 gene.","definition_xrefs":["UniProtKB:O74947","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C553.10 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC553.10","synonyms":[{"name":"Spom972h-SPCC553.10","type":"exact"}],"termid":"PR:O74947"}


id: FYPO:0005404
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which chromosomes remain linear, but lose telomeric repeats. Subtelomeric DNA may also be lost.","definition_xrefs":["PMID:12930956","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromosome morphology during vegetative growth","termid":"FYPO:0000848"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000641"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0000707","FYPO:0001985","FYPO:0000641","FYPO:0005447","FYPO:0000654","FYPO:0001320","FYPO:0000652","FYPO:0000002"],"is_obsolete":false,"name":"telomeric regions absent from linear chromosomes","synonyms":[{"name":"telomeric regions absent from linear chromosomes during mitotic cell cycle","type":"related"},{"name":"telomeric regions absent from linear chromosomes during vegetative growth","type":"exact"}],"termid":"FYPO:0005404"}


id: SO:0001602
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A variant that changes the translational product with respect to the reference.","direct_ancestors":[{"relation_name":"is_a","term_name":"translational_product_function_variant","termid":"SO:0001539"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complex_change_of_translational_product_variant","synonyms":[{"name":"complex change of translational product variant","type":"exact"}],"termid":"SO:0001602"}


id: GO:0097019
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of neurotransmitter receptors.","definition_xrefs":["GOC:kmv"],"gene_count":0,"genotype_count":0,"name":"obsolete neurotransmitter receptor catabolic process (obsolete GO:0097019)","synonyms":[{"name":"neurotransmitter receptor breakdown","type":"exact"},{"name":"neurotransmitter receptor catabolism","type":"exact"},{"name":"neurotransmitter receptor degradation","type":"exact"}],"termid":"GO:0097019"}


id: PBO:0053340
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 208","termid":"PBO:0053340"}


id: GO:0005471
data:
  {"annotated_genes":["SJAG_02050"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[58934],"is_not":false,"summary":null,"term":"GO:0005471"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP(out) + ADP(in) = ATP(in) + ADP(out).","definition_xrefs":["TC:2.A.29.1.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ATP transmembrane transporter activity","termid":"GO:0005347"},{"relation_name":"is_a","term_name":"ADP transmembrane transporter activity","termid":"GO:0015217"},{"relation_name":"is_a","term_name":"antiporter activity","termid":"GO:0015297"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02050":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"ATP:ADP antiporter activity","references_by_uniquename":{"GO_REF:0000002":null},"secondary_identifiers":["GO:0005349","RHEA:34999"],"synonyms":[{"name":"ADP/ATP carrier protein","type":"exact"},{"name":"ADP/ATP translocase","type":"exact"},{"name":"ATP/ADP exchange","type":"exact"},{"name":"ATP/ADP exchanger","type":"exact"},{"name":"adenine nucleotide translocase","type":"exact"}],"termid":"GO:0005471","terms_by_termid":{"GO:0005471":null}}


id: PBO:0047778
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"forkhead box D1","termid":"PBO:0047778"}


id: GO:0090095
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of metanephric cap mesenchymal cell proliferation. Metanephric cap mesenchymal cell proliferation is the multiplication or reproduction of metanephric cap mesenchymal cells, resulting in the expansion of the cell population. A metanephric cap mesenchymal cell is a mesenchymal cell that has condensed with other mesenchymal cells surrounding the ureteric bud tip.","definition_xrefs":["GOC:dph","GOC:tb","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mesenchymal cell proliferation","termid":"GO:0010464"},{"relation_name":"is_a","term_name":"regulation of cell proliferation involved in kidney development","termid":"GO:1901722"},{"relation_name":"regulates","term_name":"metanephric cap mesenchymal cell proliferation involved in metanephros development","termid":"GO:0090094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of metanephric cap mesenchymal cell proliferation","termid":"GO:0090095"}


id: PBO:0056350
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microtubule associated protein 7","termid":"PBO:0056350"}


id: MONDO:0009959
data:
  {"annotated_genes":["SJAG_03324"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86670],"is_not":false,"summary":null,"term":"MONDO:0009959"}]},"cv_name":"mondo","definition":"A genetic disorder characterized by abnormalities in the breakdown of phytanic acid. It results in accumulation of phytanic acid in the blood, brain and other tissues. Signs and symptoms include retinitis pigmentosa which may lead to blindness, hearing problems and deafness, hypotonia, ataxia, nystagmus, facial deformities, and mental and growth retardation.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"peroxisome biogenesis disorder","termid":"MONDO:0019234"},{"relation_name":"is_a","term_name":"peroxisome biogenesis disorder due to PEX12 defect","termid":"MONDO:0100266"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03324":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0019053"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005559","MONDO:0005066","MONDO:0005244","MONDO:0019053"],"is_obsolete":false,"name":"peroxisome biogenesis disorder type 3B","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:763607","DOID:0081241","GARD:15226","OMIM:266510","UMLS:C3550693"],"synonyms":[{"name":"PBD3B","type":"related"},{"name":"infantile phytanic acid storage disease","type":"exact"},{"name":"peroxisome biogenesis disorder 3B","type":"exact"},{"name":"peroxisome biogenesis disorder type 3B","type":"exact"}],"termid":"MONDO:0009959","terms_by_termid":{"MONDO:0009959":null},"xrefs":{"Monarch":{"xref_id":"0009959"}}}


id: SO:0002067
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A deletion of the HERV mobile element with respect to a reference.","definition_xrefs":["NCBI:th"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"Endogenous_Retrovirus_LTR_retrotransposon","termid":"SO:0002268"},{"relation_name":"is_a","term_name":"mobile_element_deletion","termid":"SO:0002066"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HERV_deletion","synonyms":[{"name":"HERV deletion","type":"exact"}],"termid":"SO:0002067"}


id: PBO:0067157
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 209, pseudogene","termid":"PBO:0067157"}


id: SO:0000953
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An origin of bacterial chromosome replication.","definition_xrefs":["SO:as"],"direct_ancestors":[{"relation_name":"is_a","term_name":"origin_of_replication","termid":"SO:0000296"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oriC","synonyms":[{"name":"origin of bacterial chromosome replication","type":"exact"}],"termid":"SO:0000953"}


id: PBO:0031294
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-cellular_physical_quality_phenotype","termid":"PBO:0031294"}


id: PBO:0088901
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA cleavage and polyadenylation specificity factor complex, WD repeat protein Pfs2","termid":"PBO:0088901"}


id: MONDO:0700207
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Transient state of hypogonadotropic hypogonadism associated with prolongation of childhood phase of growth, delayed skeletal maturation, delayed and attenuated pubertal growth spurt, and relatively low insulin-like growth factor-1 secretion.","definition_xrefs":["PMID:23087852"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"constitutional delay of growth and puberty","secondary_identifiers":["UMLS:C0342538","MEDGEN:575091","icd11.foundation:1683573263","SCTID:237813007"],"termid":"MONDO:0700207","xrefs":{"Monarch":{"xref_id":"0700207"}}}


id: PBO:0031288
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-gene_expression_phenotype","termid":"PBO:0031288"}


id: GO:0033901
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of poly(A), forming oligoribonucleotides and ultimately 3'-AMP.","definition_xrefs":["EC:3.1.27.8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA endonuclease activity producing 3'-phosphomonoesters, hydrolytic mechanism","termid":"GO:0016892"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0016787","GO:0140098","GO:0003824","GO:0003674","GO:0016788"],"is_obsolete":false,"name":"ribonuclease V activity","secondary_identifiers":["MetaCyc:3.1.27.8-RXN"],"synonyms":[{"name":"endoribonuclease V activity","type":"related"}],"termid":"GO:0033901"}


id: PBO:0003325
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human THOC5 ortholog (predicted)","termid":"PBO:0003325"}


id: MONDO:0016773
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Atrophic lichen planus (LP) is a rare variant of cutaneous lichen planus characterized by the development of pale papules or plaques with an atrophic center.","definition_xrefs":["Orphanet:254449"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lichen planus","termid":"MONDO:0006572"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"atrophic lichen planus","secondary_identifiers":["MedDRA:10056959","UMLS:C0023647","SCTID:25858008","GARD:12675","MEDGEN:9754","icd11.foundation:1633911307","NCIT:C34777"],"synonyms":[{"name":"atrophic LP","type":"exact"}],"termid":"MONDO:0016773","xrefs":{"Monarch":{"xref_id":"0016773"}}}


id: PBO:0049757
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"host cell factor C1","termid":"PBO:0049757"}


id: GO:0071403
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a high density lipoprotein particle stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to lipoprotein particle stimulus","termid":"GO:0071402"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to high density lipoprotein particle stimulus","secondary_identifiers":["GO:0055099"],"synonyms":[{"name":"cellular response to high-density lipoprotein particle stimulus","type":"exact"},{"name":"response to high density lipoprotein particle","type":"broad"},{"name":"response to high density lipoprotein particle stimulus","type":"broad"}],"termid":"GO:0071403"}


id: GO:1900558
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving austinol.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic process","termid":"GO:0008152"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"austinol metabolic process","synonyms":[{"name":"austinol metabolism","type":"exact"}],"termid":"GO:1900558"}


id: PBO:0055518
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2952","termid":"PBO:0055518"}


id: GO:0033607
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heterodimeric protein complex formed of superoxide dismutase 1 and Bcl-2. Complex formation is thought to link superoxide dismutase to an apoptotic pathway.","definition_xrefs":["PMID:16790527","PMID:15233914"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"SOD1-Bcl-2 complex","termid":"GO:0033607"}


id: MONDO:0006969
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Sialadenitis is an infection of the salivary glands. It is usually caused by a virus or bacteria. The parotid (in front ofthe ear) and submandibular (under the chin) glands are most commonly affected. Sialadenitis may be associated with pain, tenderness, redness, and gradual, localized swelling of the affected area. Sialadenitis most commonly affects the elderly and chronically ill especially those with dry mouth or who are dehydrated, but can also affected people of any age including newborn babies. Diagnosis is usually made by clinical exam but a CT scan, MRI scan or ultrasound may be done if the doctor suspects an abscess or to look for stones. Treatment may include an antibiotic (if bacterial), warm compresses, increasing fluid intake and good oral hygiene. Most salivary gland infections go away on their own or are cured with treatment. Complications are not common.","direct_ancestors":[{"relation_name":"is_a","term_name":"salivary gland disorder","termid":"MONDO:0001142"},{"relation_name":"is_a","term_name":"lymphadenitis","termid":"MONDO:0002052"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"sialadenitis","secondary_identifiers":["EFO:1001179","UMLS:C0037023","MEDGEN:48657","NCIT:C115165","NCIT:C26882","ICD9:527.2","DOID:10303","SCTID:42982001","MedDRA:10040627","MESH:D012793"],"synonyms":[{"name":"adenitis, salivary gland","type":"related"},{"name":"lymphadenitis (disease) of saliva-secreting gland","type":"exact"},{"name":"saliva-secreting gland lymphadenitis (disease)","type":"exact"},{"name":"salivary gland inflammation","type":"related"},{"name":"sialitis","type":"exact"},{"name":"sialoadenitis","type":"exact"}],"termid":"MONDO:0006969","xrefs":{"Monarch":{"xref_id":"0006969"}}}


id: GO:0032100
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases appetite.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of response to food","termid":"GO:0032097"},{"relation_name":"is_a","term_name":"regulation of appetite","termid":"GO:0032098"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of appetite","synonyms":[{"name":"activation of appetite","type":"narrow"},{"name":"appetite stimulation","type":"related"},{"name":"positive regulation of hunger","type":"related"},{"name":"stimulation of appetite","type":"narrow"},{"name":"up regulation of appetite","type":"exact"},{"name":"up-regulation of appetite","type":"exact"},{"name":"upregulation of appetite","type":"exact"}],"termid":"GO:0032100"}


id: MONDO:0024857
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An immature teratoma that develops as a primary tumor in an anatomic site other than the testis or ovary.","definition_xrefs":["NCIT:C8884"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malignant teratoma","termid":"MONDO:0003514"},{"relation_name":"is_a","term_name":"extragonadal nonseminomatous germ cell tumor","termid":"MONDO:0003578"},{"relation_name":"is_a","term_name":"immature teratoma","termid":"MONDO:0024746"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"immature extragonadal teratoma","secondary_identifiers":["UMLS:C0855163","MEDGEN:167781"],"synonyms":[{"name":"extragonadal primary malignant teratoma","type":"exact"},{"name":"immature extragonadal teratoma","type":"exact"},{"name":"malignant extragonadal teratoma","type":"exact"},{"name":"primary malignant extragonadal teratoma","type":"exact"}],"termid":"MONDO:0024857","xrefs":{"Monarch":{"xref_id":"0024857"}}}


id: FYPO:0008304
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the nucleus during one or both meiotic nuclear divisions is abolished.","definition_xrefs":["PomBase:pc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to nucleus during meiosis","termid":"FYPO:0002957"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0000138"],"is_obsolete":false,"name":"abolished protein localization to nucleus during meiosis","termid":"FYPO:0008304"}


id: GO:0072105
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A wavelike sequence of involuntary muscular contraction and relaxation that passes along the ureter, impelling the contents onwards. The ureter is one of a pair of thick-walled tubes that transports urine from the kidney pelvis to the urinary bladder.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ureter smooth muscle contraction","termid":"GO:0014849"},{"relation_name":"is_a","term_name":"peristalsis","termid":"GO:0030432"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ureteric peristalsis","termid":"GO:0072105"}


id: PBO:0109131
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CRIPTO pseudogene 4","termid":"PBO:0109131"}


id: GO:1900214
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of apoptotic process involved in metanephric collecting duct development.","definition_xrefs":["GOC:TermGenie","PMID:17314325","GOC:yaf","GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of apoptotic process involved in development","termid":"GO:1904748"},{"relation_name":"regulates","term_name":"apoptotic process involved in metanephric collecting duct development","termid":"GO:1900204"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of apoptotic process involved in metanephric collecting duct development","synonyms":[{"name":"regulation of apoptosis of metanephric collecting duct development","type":"narrow"},{"name":"regulation of apoptotic cell death of metanephric collecting duct development","type":"exact"},{"name":"regulation of apoptotic process of metanephric collecting duct development","type":"exact"},{"name":"regulation of apoptotic program of metanephric collecting duct development","type":"narrow"},{"name":"regulation of apoptotic programmed cell death of metanephric collecting duct development","type":"exact"},{"name":"regulation of programmed cell death by apoptosis of metanephric collecting duct development","type":"exact"},{"name":"regulation of signaling (initiator) caspase activity of metanephric collecting duct development","type":"related"},{"name":"regulation of type I programmed cell death of metanephric collecting duct development","type":"narrow"}],"termid":"GO:1900214"}


id: MONDO:0013105
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"excluded_subClassOf","term_name":"skin basal cell carcinoma","termid":"MONDO:0005341"},{"relation_name":"is_a","term_name":"basal cell carcinoma, susceptibility to","termid":"MONDO:0100047"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"basal cell carcinoma, susceptibility to, 5","secondary_identifiers":["OMIM:613062","UMLS:C2751601","MEDGEN:414060"],"synonyms":[{"name":"BCC5","type":"exact"},{"name":"basal cell carcinoma, susceptibility to, 5","type":"exact"}],"termid":"MONDO:0013105","xrefs":{"Monarch":{"xref_id":"0013105"}}}


id: PBO:0067709
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal 7","termid":"PBO:0067709"}


id: PBO:0004563
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L38 (predicted)","termid":"PBO:0004563"}


id: GO:0035820
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which angiotensin decreases the amount of sodium that is excreted in urine over a unit of time.","definition_xrefs":["GOC:mtg_25march11","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of renal output by angiotensin","termid":"GO:0003083"},{"relation_name":"is_a","term_name":"negative regulation of renal sodium excretion","termid":"GO:0035814"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of renal sodium excretion by angiotensin","termid":"GO:0035820"}


id: GO:0015870
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of acetylcholine into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Acetylcholine is an acetic acid ester of the organic base choline and functions as a neurotransmitter, released at the synapses of parasympathetic nerves and at neuromuscular junctions.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cation transport","termid":"GO:0015695"},{"relation_name":"is_a","term_name":"nitrogen compound transport","termid":"GO:0071705"},{"relation_name":"is_a","term_name":"acetate ester transport","termid":"GO:1901374"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"acetylcholine transport","termid":"GO:0015870"}


id: PBO:0039645
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AP1B1 pseudogene 1","termid":"PBO:0039645"}


id: PBO:0078703
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Leu (CAA) 5-1","termid":"PBO:0078703"}


id: PBO:0076353
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synaptotagmin 17","termid":"PBO:0076353"}


id: PBO:0083019
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Deleted ORF; does not encode a discrete protein; YKL003W-A was added based on homology to closely related fungi, but was later withdrawn because it was completely contained within DID4/YKL002W","termid":"PBO:0083019"}


id: PR:O74994
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rng3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74994"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring assembly protein 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC613.04c","synonyms":[{"name":"Spom972h-rng3","type":"exact"}],"termid":"PR:O74994"}


id: PBO:0057643
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1234","termid":"PBO:0057643"}


id: GO:1902364
data:
  {"annotated_genes":["SJAG_00883"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107601],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902543"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of protein localization to spindle pole body.","definition_xrefs":["GOC:TermGenie","PMID:21131906"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein localization to spindle pole body","termid":"GO:1902363"},{"relation_name":"is_a","term_name":"negative regulation of protein localization","termid":"GO:1903828"},{"relation_name":"negatively_regulates","term_name":"protein localization to spindle pole body","termid":"GO:0071988"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00883":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of protein localization to spindle pole body","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of protein localisation to spindle pole body","type":"exact"},{"name":"down regulation of protein localization to spindle pole body","type":"exact"},{"name":"down-regulation of protein localisation to spindle pole body","type":"exact"},{"name":"down-regulation of protein localization to spindle pole body","type":"exact"},{"name":"downregulation of protein localisation to spindle pole body","type":"exact"},{"name":"downregulation of protein localization to spindle pole body","type":"exact"},{"name":"inhibition of protein localisation to spindle pole body","type":"narrow"},{"name":"inhibition of protein localization to spindle pole body","type":"narrow"},{"name":"negative regulation of protein localisation to spindle pole body","type":"exact"}],"termid":"GO:1902364","terms_by_termid":{"GO:1902543":null}}


id: GO:0102485
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: dATP + 2 H2O = dAMP + 2 hydrogenphosphate + 2 H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete dATP phosphohydrolase activity (obsolete GO:0102485)","termid":"GO:0102485"}


id: BFO:0000051
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"a core relation that holds between a whole and its part","direct_ancestors":[{"relation_name":"is_a","term_name":"overlaps","termid":"RO:0002131"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_part","termid":"BFO:0000051"}


id: MONDO:0014934
data:
  {"annotated_genes":["SJAG_02084"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87521],"is_not":false,"summary":null,"term":"MONDO:0014934"}]},"cv_name":"mondo","definition":"Any autosomal dominant cerebellar ataxia in which the cause of the disease is a mutation in the UBA5 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant cerebellar ataxia","termid":"MONDO:0020380"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02084":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0002039"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0002039","MONDO:0000426"],"is_obsolete":false,"name":"spinocerebellar ataxia, autosomal recessive 24","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C4310699","DOID:0111615","OMIM:617133","MEDGEN:934666"],"synonyms":[{"name":"SCAR24","type":"exact"},{"name":"UBA5 autosomal dominant cerebellar ataxia","type":"exact"},{"name":"autosomal dominant cerebellar ataxia caused by mutation in UBA5","type":"exact"},{"name":"spinocerebellar ataxia, autosomal recessive 24","type":"exact"},{"name":"spinocerebellar ataxia, autosomal recessive 24; SCAR24","type":"exact"},{"name":"spinocerebellar ataxia, autosomal recessive type 24","type":"exact"}],"termid":"MONDO:0014934","terms_by_termid":{"MONDO:0014934":null},"xrefs":{"Monarch":{"xref_id":"0014934"}}}


id: PBO:0024834
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Beta Glucan Synthase","termid":"PBO:0024834"}


id: GO:0004609
data:
  {"annotated_genes":["SJAG_02902","SJAG_02980","SJAG_03524"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[62207,71437,79511],"is_not":false,"summary":null,"term":"GO:0004609"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: H+ + phosphatidyl-L-serine = CO2 + phosphatidylethanolamine.","definition_xrefs":["RHEA:20828","EC:4.1.1.65"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02902":null,"SJAG_02980":null,"SJAG_03524":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"phosphatidylserine decarboxylase activity","references_by_uniquename":{"GO_REF:0000003":null,"GO_REF:0000033":null},"secondary_identifiers":["KEGG_REACTION:R02055","MetaCyc:PHOSPHASERDECARB-RXN","Reactome:R-HSA-1483212"],"synonyms":[{"name":"PS decarboxylase activity","type":"related"},{"name":"phosphatidyl-L-serine carboxy-lyase (phosphatidylethanolamine-forming)","type":"related"},{"name":"phosphatidyl-L-serine carboxy-lyase activity","type":"related"}],"termid":"GO:0004609","terms_by_termid":{"GO:0004609":null}}


id: PBO:0071920
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S3 pseudogene 5","termid":"PBO:0071920"}


id: FYPO:0000289
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A gene expression phenotype that affects the regulation of translation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gene expression regulation phenotype","termid":"FYPO:0000288"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002"],"is_obsolete":false,"name":"translation regulation phenotype","synonyms":[{"name":"fission yeast translation regulation phenotype","type":"exact"}],"termid":"FYPO:0000289"}


id: PBO:0062576
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 10 subfamily D member 5 pseudogene","termid":"PBO:0062576"}


id: PBO:0005064
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UTP-glucose-1-phosphate uridylyltransferase (predicted)","termid":"PBO:0005064"}


id: MONDO:0800482
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An injury that involves the head.","direct_ancestors":[{"relation_name":"is_a","term_name":"injury","termid":"MONDO:0021178"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"head injury","termid":"MONDO:0800482","xrefs":{"Monarch":{"xref_id":"0800482"}}}


id: PBO:0048267
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polypeptide N-acetylgalactosaminyltransferase 5","termid":"PBO:0048267"}


id: PBO:0073081
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"succinate dehydrogenase complex assembly factor 1","termid":"PBO:0073081"}


id: PATO:0000796
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000796 regeneration value (obsolete PATO:0000796)","termid":"PATO:0000796"}


id: PBO:0088344
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial translation factor (GTPase) Mtg2","termid":"PBO:0088344"}


id: MONDO:1012960
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Herediatary cerebellar ataxia that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cerebellar ataxia, non-human animal","termid":"MONDO:1012956"},{"relation_name":"is_a","term_name":"hereditary ataxia, non-human animal","termid":"MONDO:1012959"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hereditary cerebellar ataxia, non-human animal","termid":"MONDO:1012960","xrefs":{"Monarch":{"xref_id":"1012960"}}}


id: GO:0102916
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: H+ + (+)-piperitol + NADPH + O2 = (+)-sesamin + NADP + 2 H2O.","definition_xrefs":["PMID:16785429","GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete sesamin synthase activity (obsolete GO:0102916)","termid":"GO:0102916"}


id: PBO:0084848
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial ribosomal protein of the large subunit; homologous to bacterial L35 and human MRPL35 ribosomal proteins","termid":"PBO:0084848"}


id: GO:2001078
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to (1->6)-beta-D-glucan.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polysaccharide binding","termid":"GO:0030247"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"(1->6)-beta-D-glucan binding","synonyms":[{"name":"(1,6)-beta-D-glucan binding","type":"exact"},{"name":"1,6-beta-D-glucan binding","type":"exact"},{"name":"1->6-beta-D-glucan binding","type":"exact"},{"name":"beta-(1,6)-D-glucan binding","type":"exact"},{"name":"beta-(1->6)-D-glucan binding","type":"exact"},{"name":"beta-1,6-D-glucan binding","type":"exact"},{"name":"beta-1->6-D-glucan binding","type":"exact"}],"termid":"GO:2001078"}


id: MONDO:0019137
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Non-24-hour sleep-wake disorder (non-24 disorder), also known as hypernychthemeral syndrome, is a circadian rhythm sleep disorder characterized by non-synchronization to a 24-hour day leading to insomnia and daytime sleepiness with sometimes severe associated manifestations.","definition_xrefs":["Orphanet:73267"],"direct_ancestors":[{"relation_name":"is_a","term_name":"circadian rhythm sleep disorder","termid":"MONDO:0024361"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-24-hour sleep-wake syndrome","secondary_identifiers":["MEDGEN:148383","ICD10CM:G47.24","NORD:1511","SCTID:230496009","UMLS:C0751759","GARD:10949"],"synonyms":[{"name":"Non-24-Hour Sleep-Wake Disorder","type":"exact"},{"name":"circadian rhythm sleep disorder, free running type","type":"exact"},{"name":"circadian rhythm sleep disorder, free-running type","type":"exact"},{"name":"hypernychthemeral syndrome","type":"exact"},{"name":"non 24 hour sleep wake disorder","type":"related"},{"name":"non-24","type":"exact"}],"termid":"MONDO:0019137","xrefs":{"Monarch":{"xref_id":"0019137"}}}


id: PBO:0071393
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L30 pseudogene 16","termid":"PBO:0071393"}


id: MONDO:0017443
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenital absence of both forearm and hand is a rare developmental defect during embryogenesis characterized by unilateral or bilateral arrest of proximal to distal development of the upper limb, leading to a transverse deficiency with absence of the forearm, wrist and hand. A short below-the-elbow amputation is most commonly observed and the residual limb is usually well cushioned, with rudimentary nubbins or dumpling possibly found on the end.","definition_xrefs":["Orphanet:294979"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skeletal dysplasia","termid":"MONDO:0018230"},{"relation_name":"is_a","term_name":"dysostosis","termid":"MONDO:0018234"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"congenital absence of both forearm and hand","secondary_identifiers":["UMLS:C1306663","GARD:21194","ICD10CM:Q71.2","MEDGEN:727129","icd11.foundation:810894993"],"synonyms":[{"name":"radio-ulnar terminal transverse meromelia","type":"exact"}],"termid":"MONDO:0017443","xrefs":{"Monarch":{"xref_id":"0017443"}}}


id: GO:0022009
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The differentiation of endothelial cells from progenitor cells during blood vessel development, and the de novo formation of blood vessels and tubes in the central nervous system. The capillary endothelial cells in the brain are specialized to form the blood-brain barrier.","definition_xrefs":["GO_REF:0000021","GOC:jid","GOC:dph","GOC:dgh","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vasculogenesis","termid":"GO:0001570"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"central nervous system vasculogenesis","termid":"GO:0022009"}


id: GO:0097680
data:
  {"annotated_genes":["SJAG_02527","SJAG_04199"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[114273,116707],"is_not":false,"summary":null,"term":"GO:0097680"}]},"cv_name":"biological_process","definition":"An instance of double-strand break repair via nonhomologous end joining that requires a number of factors important for V(D)J recombination, including the KU70/80 heterodimer (KU), XRCC4, ligase IV, and DNA-PKcs in mammals. It does not produce translocations (as opposed to the alternative nonhomologous end joining).","definition_xrefs":["PMID:18584027","GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"double-strand break repair via nonhomologous end joining","termid":"GO:0006303"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02527":null,"SJAG_04199":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006281"}],"interesting_parent_ids":["GO:0006281","GO:0006259","GO:0008150"],"is_obsolete":false,"name":"double-strand break repair via classical nonhomologous end joining","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"C-NHEJ","type":"related"},{"name":"canonical nonhomologous end joining","type":"exact"}],"termid":"GO:0097680","terms_by_termid":{"GO:0097680":null}}


id: MONDO:0019902
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Monosomy 13q34 is a rare chromosomal anomaly syndrome, resulting from the partial deletion of the long arm of chromosome 13, principally characterized by global developmental delay, mild intellectual disability, obesity and mild craniofacial dysmorphism (microcephaly, wide rectangular forehead, downslanting palpebral fissures, mild ptosis, prominent nose with long nasal bridge and broad tip, small chin). Other variable reported features include congenital heart defects, hand and foot anomalies (e.g. polydactyly) and agenesis of the corpus callosum.","definition_xrefs":["Orphanet:96168"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete chromosomal anomaly with cataract (obsolete MONDO:0020226)","termid":"MONDO:0020226"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"partial deletion of the long arm of chromosome 13","termid":"MONDO:0016911"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"monosomy 13q34","secondary_identifiers":["UMLS:C4707797","SCTID:766716004","GARD:16847","MEDGEN:1631901"],"synonyms":[{"name":"Del(13)(q34)","type":"exact"},{"name":"distal deletion 13q34","type":"exact"},{"name":"monosomy type 13q34","type":"exact"},{"name":"subtelomeric deletion 13q34","type":"exact"}],"termid":"MONDO:0019902","xrefs":{"Monarch":{"xref_id":"0019902"}}}


id: GO:2001056
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of cysteine-type endopeptidase activity.","definition_xrefs":["GOC:obol"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of cysteine-type endopeptidase activity (obsolete GO:2001056)","synonyms":[{"name":"positive regulation of lysosomal cysteine-type endopeptidase","type":"related"},{"name":"positive regulation of thiol endopeptidase activity","type":"exact"}],"termid":"GO:2001056"}


id: PBO:0067073
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 104, pseudogene","termid":"PBO:0067073"}


id: GO:1900996
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of benzene.","definition_xrefs":["GOC:yaf","UniPathway:UPA00272","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benzene metabolic process","termid":"GO:0018910"},{"relation_name":"is_a","term_name":"hydrocarbon catabolic process","termid":"GO:0120253"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"benzene catabolic process","synonyms":[{"name":"benzene breakdown","type":"exact"},{"name":"benzene catabolism","type":"exact"},{"name":"benzene degradation","type":"exact"}],"termid":"GO:1900996"}


id: PBO:0015676
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Suppressor of MEi2","termid":"PBO:0015676"}


id: GO:0002588
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of antigen processing and presentation of peptide antigen via MHC class II.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of antigen processing and presentation of peptide or polysaccharide antigen via MHC class II","termid":"GO:0002582"},{"relation_name":"is_a","term_name":"positive regulation of antigen processing and presentation of peptide antigen","termid":"GO:0002585"},{"relation_name":"is_a","term_name":"regulation of antigen processing and presentation of peptide antigen via MHC class II","termid":"GO:0002586"},{"relation_name":"positively_regulates","term_name":"antigen processing and presentation of peptide antigen via MHC class II","termid":"GO:0002495"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of antigen processing and presentation of peptide antigen via MHC class II","synonyms":[{"name":"activation of antigen processing and presentation of peptide antigen via MHC class II","type":"narrow"},{"name":"positive regulation of peptide antigen processing and presentation via MHC class II","type":"exact"},{"name":"stimulation of antigen processing and presentation of peptide antigen via MHC class II","type":"narrow"},{"name":"up regulation of antigen processing and presentation of peptide antigen via MHC class II","type":"exact"},{"name":"up-regulation of antigen processing and presentation of peptide antigen via MHC class II","type":"exact"},{"name":"upregulation of antigen processing and presentation of peptide antigen via MHC class II","type":"exact"}],"termid":"GO:0002588"}


id: MONDO:0004901
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Syndromes which feature dyskinesias as a cardinal manifestation of the disease process. Included in this category are degenerative, hereditary, post-infectious, medication-induced, post-inflammatory, and post-traumatic conditions.","definition_xrefs":["MESH:D009069"],"direct_ancestors":[{"relation_name":"is_a","term_name":"movement disorder","termid":"MONDO:0005395"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lingual-facial-buccal dyskinesia","secondary_identifiers":["UMLS:C0152115","DOID:9854","ICD9:333.82","MEDGEN:57747","SCTID:49386006"],"synonyms":[{"name":"oro-facial dyskinesia","type":"exact"}],"termid":"MONDO:0004901","xrefs":{"Monarch":{"xref_id":"0004901"}}}


id: PBO:0111865
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine-rich repeat protein","termid":"PBO:0111865"}


id: PBO:0053685
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 877","termid":"PBO:0053685"}


id: GO:0050815
data:
  {"annotated_genes":["SJAG_04933","SJAG_03118"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[78442,72916],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990269"}]},"cv_name":"molecular_function","definition":"Binding to a phosphorylated serine residue within a protein.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein phosphorylated amino acid binding","termid":"GO:0045309"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03118":null,"SJAG_04933":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"phosphoserine residue binding","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"phosphoserine binding","type":"related"}],"termid":"GO:0050815","terms_by_termid":{"GO:1990269":null}}


id: GO:0014838
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a satellite cell becomes capable of differentiating autonomously into a myoblast in an environment that is neutral with respect to the developmental pathway. Upon specification, the cell fate can be reversed. This occurs as part of skeletal muscle regeneration. A myoblast is a mononucleate cell type that, by fusion with other myoblasts, gives rise to the myotubes that eventually develop into skeletal muscle fibers.","definition_xrefs":["CL:0000056","GOC:ef","PMID:16607119","GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myoblast fate specification","termid":"GO:0048626"},{"relation_name":"part_of","term_name":"myoblast fate commitment involved in skeletal muscle regeneration","termid":"GO:0014836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"myoblast fate specification involved in skeletal muscle regeneration","termid":"GO:0014838"}


id: PBO:0043884
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cysteine rich with EGF like domains 1","termid":"PBO:0043884"}


id: GO:0046946
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving hydroxylysine (5-hydroxy-2,6-diaminohexanoic acid), a chiral alpha-amino acid. Hydroxylysine is found in collagen and commonly has galactose and then glucose added sequentially by glycosyltransferases.","definition_xrefs":["PubChem_Compound:1029","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified amino acid metabolic process","termid":"GO:0006575"},{"relation_name":"is_a","term_name":"aspartate family amino acid metabolic process","termid":"GO:0009066"},{"relation_name":"is_a","term_name":"non-proteinogenic amino acid metabolic process","termid":"GO:0170041"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006520","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"hydroxylysine metabolic process","synonyms":[{"name":"hydroxylysine metabolism","type":"exact"}],"termid":"GO:0046946"}


id: PBO:0070583
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 49","termid":"PBO:0070583"}


id: PBO:0044829
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defensin beta 116","termid":"PBO:0044829"}


id: GO:0005669
data:
  {"annotated_genes":["SJAG_04274","SJAG_00421","SJAG_00584","SJAG_03285","SJAG_01808","SJAG_03107","SJAG_02458","SJAG_00741","SJAG_04654","SJAG_00872","SJAG_00735","SJAG_03900","SJAG_02541","SJAG_01475","SJAG_04977","SJAG_04917"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[58093,59489,68490,70311,71106,71753,74071,74866,75318,75989,77085,77225,80697,95938,103978,117946],"is_not":false,"summary":null,"term":"GO:0005669"}]},"cv_name":"cellular_component","definition":"A complex composed of TATA binding protein (TBP) and TBP associated factors (TAFs); the total mass is typically about 800 kDa. Most of the TAFs are conserved across species. In TATA-containing promoters for RNA polymerase II (Pol II), TFIID is believed to recognize at least two distinct elements, the TATA element and a downstream promoter element. TFIID is also involved in recognition of TATA-less Pol II promoters. Binding of TFIID to DNA is necessary but not sufficient for transcription initiation from most RNA polymerase II promoters.","definition_xrefs":["GOC:krc","GOC:mah","ISBN:0471953393","ISBN:0879695501"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II transcription regulator complex","termid":"GO:0090575"},{"relation_name":"part_of","term_name":"RNA polymerase II, holoenzyme","termid":"GO:0016591"}],"gene_count":16,"genes_by_uniquename":{"SJAG_00421":null,"SJAG_00584":null,"SJAG_00735":null,"SJAG_00741":null,"SJAG_00872":null,"SJAG_01475":null,"SJAG_01808":null,"SJAG_02458":null,"SJAG_02541":null,"SJAG_03107":null,"SJAG_03285":null,"SJAG_03900":null,"SJAG_04274":null,"SJAG_04654":null,"SJAG_04917":null,"SJAG_04977":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"part_of","termid":"GO:0005654"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005654","GO:0005575","GO:0005634","GO:0032991"],"is_obsolete":false,"name":"transcription factor TFIID complex","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0005669","terms_by_termid":{"GO:0005669":null}}


id: PBO:0063544
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylethanolamine binding protein 1 pseudogene 3","termid":"PBO:0063544"}


id: FYPO:0003626
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the tip of a shmoo, or mating projection, is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization","termid":"FYPO:0003627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal protein localization to shmoo tip","synonyms":[{"name":"normal protein localisation to shmoo tip","type":"exact"},{"name":"normal protein localization to mating projection tip","type":"exact"},{"name":"normal protein localization to shmoo projection","type":"exact"}],"termid":"FYPO:0003626"}


id: MONDO:0001092
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A well-circumscribed benign smooth muscle neoplasm arising from the colon. It is characterized by the presence of spindle cells with cigar-shaped nuclei, interlacing fascicles, and a whorled pattern.","definition_xrefs":["NCIT:C5492"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benign colon neoplasm","termid":"MONDO:0002278"},{"relation_name":"is_a","term_name":"colorectal leiomyoma","termid":"MONDO:0003299"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"colon leiomyoma","secondary_identifiers":["DOID:10656","MEDGEN:232379","UMLS:C1333092"],"synonyms":[{"name":"colon leiomyoma","type":"exact"},{"name":"colonic leiomyoma","type":"exact"},{"name":"leiomyoma of colon","type":"exact"},{"name":"leiomyoma of the colon","type":"exact"}],"termid":"MONDO:0001092","xrefs":{"Monarch":{"xref_id":"0001092"}}}


id: MONDO:0054577
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited bleeding disorder, platelet-type","termid":"MONDO:0000009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"bleeding disorder, platelet-type, 21","secondary_identifiers":["OMIM:617443","UMLS:C4479515","GARD:16230","MEDGEN:1386863"],"synonyms":[{"name":"BDPLT21","type":"related"},{"name":"bleeding disorder, platelet-type, 21","type":"exact"}],"termid":"MONDO:0054577","xrefs":{"Monarch":{"xref_id":"0054577"}}}


id: PBO:0030331
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_phospholipid_level","termid":"PBO:0030331"}


id: MONDO:1010239
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Peripheral neuropathy that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuromuscular disease, non-human animal","termid":"MONDO:1012983"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peripheral neuropathy, non-human animal","secondary_identifiers":["OMIA:001150"],"termid":"MONDO:1010239","xrefs":{"Monarch":{"xref_id":"1010239"}}}


id: PBO:0070405
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"replication protein A1","termid":"PBO:0070405"}


id: PBO:0017555
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitotic and meiotic (sporulation) septin Spn2","termid":"PBO:0017555"}


id: FYPO:0000320
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce a cell of normal morphology (i.e. size, shape, and structure) that undergoes a single round of cell division, and then dies.","definition_xrefs":["PomBase:jh","PomBase:vw","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable vegetative cell with normal cell morphology","termid":"FYPO:0002199"},{"relation_name":"is_a","term_name":"inviable after spore germination, single cell division","termid":"FYPO:0002280"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000004"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001312","FYPO:0000257","FYPO:0000004"],"is_obsolete":false,"name":"inviable after spore germination, single cell division, normal cell morphology","synonyms":[{"name":"inviable following spore germination, single cell division, normal cell morphology","type":"exact"},{"name":"inviable germinated spore, single cell division, normal cell morphology","type":"exact"},{"name":"lethal after spore germination, single cell division, normal cell morphology","type":"exact"}],"termid":"FYPO:0000320"}


id: FYPO:0003343
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a cell is elongated, has two or more nuclei and more than one septum, and the septa not grouped together, but are located so as to form separate compartments with a single nucleus in each.","definition_xrefs":["PomBase:vw","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multinucleate multiseptate vegetative cell","termid":"FYPO:0001252"},{"relation_name":"is_a","term_name":"elongated multinucleate cell","termid":"FYPO:0003342"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0000005","FYPO:0000631","FYPO:0005447","FYPO:0000032"],"is_obsolete":false,"name":"elongated multinucleate multiseptate cell, single septa between nuclei","termid":"FYPO:0003343"}


id: PBO:0057749
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1908","termid":"PBO:0057749"}


id: GO:0097619
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that acts as a protein trafficking machinery and is responsible for the export of proteins across the parasitophorous (symbiont-containing) vacuolar membrane and into the human host cell. The PTEX complex is located in the vacuole membrane. It is ATP-powered, and comprises heat shock protein 101 (HSP101; a ClpA/B-like ATPase from the AAA+ superfamily, of a type commonly associated with protein translocons), a parasite protein termed PTEX150, and exported protein 2 (EXP2). EXP2 is the potential channel, as it is the membrane-associated component of the core PTEX complex. Two other proteins, PTEX88 and thioredoxin 2 (TRX2), were also identified as PTEX components.","definition_xrefs":["PMID:25043043","GOC:pr","PMID:19536257","PMID:25043010"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"part_of","term_name":"symbiont-containing vacuole membrane","termid":"GO:0020005"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"PTEX complex","synonyms":[{"name":"Plasmodium translocon of exported proteins","type":"related"}],"termid":"GO:0097619"}


id: PBO:0071165
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 4","termid":"PBO:0071165"}


id: GO:0030323
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the respiratory tube over time, from its formation to the mature structure. The respiratory tube is assumed to mean any tube in the respiratory tract.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tube development","termid":"GO:0035295"},{"relation_name":"is_a","term_name":"animal organ development","termid":"GO:0048513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"respiratory tube development","termid":"GO:0030323"}


id: PBO:0029909
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_terbinafine","termid":"PBO:0029909"}


id: GO:0048458
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to the floral whorl. This process pertains to the initial formation of a structure from unspecified parts.","definition_xrefs":["GOC:PO_curators","PO:0025023","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"floral whorl morphogenesis","termid":"GO:0048457"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"floral whorl formation","secondary_identifiers":["GO:0048415"],"termid":"GO:0048458"}


id: PBO:0045668
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DYNAP pseuodgene 3","termid":"PBO:0045668"}


id: PBO:0001139
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"checkpoint clamp complex protein Rad9","termid":"PBO:0001139"}


id: MONDO:0018265
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare disorder with dystonia and other neurologic or systemic manifestation (obsolete MONDO:0018265)","secondary_identifiers":["Orphanet:370106"],"termid":"MONDO:0018265","xrefs":{"Monarch":{"xref_id":"0018265"}}}


id: FYPO:0007713
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a cell contains fewer, but larger, ERMES foci than normal. An ERMES focus is a site that contains one or more ERMES complex(es).","definition_xrefs":["PomBase:mah","PMID:33483504"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component during vegetative growth","termid":"FYPO:0001322"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"large ERMES foci present in decreased numbers","synonyms":[{"name":"enlarged ERMES foci present in decreased numbers","type":"exact"},{"name":"large ERMES foci present in decreased numbers during mitotic cell cycle","type":"related"},{"name":"large ERMES foci present in decreased numbers during vegetative growth","type":"exact"},{"name":"large ERMES foci present in reduced numbers","type":"exact"}],"termid":"FYPO:0007713"}


id: MONDO:1012488
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"ACTH-independent adrenal Cushing syndrome, non-human animal","termid":"MONDO:1011681"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ACTH-independent adrenal Cushing syndrome, dog","secondary_identifiers":["OMIA:001937-9615"],"termid":"MONDO:1012488","xrefs":{"Monarch":{"xref_id":"1012488"}}}


id: PBO:0042836
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CFAP20DC divergent transcript","termid":"PBO:0042836"}


id: MONDO:0005202
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A genetic predisposition to form IgE antibodies in response to exposure to allergens and therefore, for the development of immediate (type I) hypersensitivity and atopic conditions, such as allergic rhinitis; bronchial asthma, atopic dermatitis, and food allergy. Mutations of specific alleles on the long arm of chromosome 5 have been associated with higher levels of IL-4 and IgE and are known as IL-4 promoter polymorphisms.","definition_xrefs":["NCIT:C41366"],"direct_ancestors":[{"relation_name":"is_a","term_name":"allergic disease","termid":"MONDO:0005271"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"atopic IgE-mediated allergic disorder","secondary_identifiers":["ICD9:995.3","UMLS:C1706410","MEDGEN:739536","SCTID:115665000","EFO:0002686"],"synonyms":[{"name":"Atopic allergy","type":"related"},{"name":"atopic state","type":"related"},{"name":"atopy","type":"related"}],"termid":"MONDO:0005202","xrefs":{"Monarch":{"xref_id":"0005202"}}}


id: PBO:0035822
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_histone_H3-K9_methylation_at_heterochromatin_island_during_vegetative_growth","termid":"PBO:0035822"}


id: GO:0043508
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of JUN kinase activity.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of MAP kinase activity","termid":"GO:0043407"},{"relation_name":"is_a","term_name":"regulation of JUN kinase activity","termid":"GO:0043506"},{"relation_name":"is_a","term_name":"negative regulation of JNK cascade","termid":"GO:0046329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of JUN kinase activity","synonyms":[{"name":"down regulation of JNK activity","type":"exact"},{"name":"down-regulation of JNK activity","type":"exact"},{"name":"downregulation of JNK activity","type":"exact"},{"name":"inhibition of JNK activity","type":"narrow"},{"name":"negative regulation of JUNK activity","type":"exact"}],"termid":"GO:0043508"}


id: MONDO:0011692
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete basal ganglia calcification, idiopathic, 2 (obsolete MONDO:0011692)","termid":"MONDO:0011692","xrefs":{"Monarch":{"xref_id":"0011692"}}}


id: PBO:0089712
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial phenylalanyl-tRNA synthetase Msf1","termid":"PBO:0089712"}


id: GO:0090686
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a monoatomic cation by a channel that opens when glycine betaine has been bound by the channel complex or one of its constituent parts.","definition_xrefs":["GOC:kmv","PMID:24212673"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligand-gated monoatomic cation channel activity","termid":"GO:0099094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"glycine betaine-activated nonselective monoatomic cation channel activity","synonyms":[{"name":"glycine betaine-activated nonselective monovalent cation channel activity","type":"related"}],"termid":"GO:0090686"}


id: GO:0043384
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A receptor complex found on immature T cells consisting of a T cell receptor beta chain and the pre-TCR-alpha chain, along with additional signaling components including CD3 family members and additional signaling proteins.","definition_xrefs":["ISBN:0781735149","PMID:12220932"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane signaling receptor complex","termid":"GO:0098802"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005886"],"is_obsolete":false,"name":"pre-T cell receptor complex","synonyms":[{"name":"pre-T lymphocyte receptor complex","type":"exact"},{"name":"pre-T-cell receptor complex","type":"exact"},{"name":"pre-T-lymphocyte receptor complex","type":"exact"},{"name":"pre-TCR complex","type":"exact"}],"termid":"GO:0043384"}


id: GO:0032324
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of the molybdopterin cofactor (Moco), essential for the catalytic activity of some enzymes, e.g. sulfite oxidase, xanthine dehydrogenase, and aldehyde oxidase. The cofactor consists of a mononuclear molybdenum (Mo-molybdopterin) or tungsten ion (W-molybdopterin) coordinated by one or two molybdopterin ligands.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molybdopterin cofactor metabolic process","termid":"GO:0043545"},{"relation_name":"is_a","term_name":"organophosphate biosynthetic process","termid":"GO:0090407"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"molybdopterin cofactor biosynthetic process","secondary_identifiers":["MetaCyc:Molybdenum-Cofactor-Biosynthesis","Reactome:R-HSA-947581"],"synonyms":[{"name":"molybdopterin cofactor anabolism","type":"exact"},{"name":"molybdopterin cofactor biosynthesis","type":"related"},{"name":"molybdopterin cofactor formation","type":"related"},{"name":"molybdopterin cofactor synthesis","type":"exact"}],"termid":"GO:0032324"}


id: MONDO:0007899
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A chronic inflammatory process affecting the skin. It is characterized by the presence of white, indurated plaques, epidermal atrophy, and fibrosis of the upper dermis. It usually appears in the vulva and penis.","definition_xrefs":["NCIT:C26817"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dermatitis","termid":"MONDO:0002406"},{"relation_name":"is_a","term_name":"hereditary skin disorder","termid":"MONDO:0100118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"lichen sclerosus et atrophicus","secondary_identifiers":["ICD10CM:L90.0","Orphanet:33409","MEDGEN:7338","OMIM:151590","SCTID:25674000","UMLS:C0023652","MESH:D018459"],"synonyms":[{"name":"LSA","type":"related"},{"name":"lichen SCLEROSUS ET ATROPHICUS","type":"related"},{"name":"lichen sclerosis","type":"related"},{"name":"lichen sclerosis et atrophicus","type":"related"},{"name":"lichen sclerosus","type":"related"},{"name":"lichen sclerosus et atrophicus","type":"exact"}],"termid":"MONDO:0007899","xrefs":{"Monarch":{"xref_id":"0007899"}}}


id: PBO:0003753
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAP kinase kinase kinase Byr2","termid":"PBO:0003753"}


id: GO:0035420
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A MAPK cascade that contributes to an innate immune response, a defense response mediated by germline encoded components that directly recognize components of potential pathogens.","definition_xrefs":["GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete MAPK cascade involved in innate immune response (obsolete GO:0035420)","synonyms":[{"name":"MAPKKK cascade involved in innate immune response","type":"exact"}],"termid":"GO:0035420"}


id: MONDO:0010701
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete opticoacoustic nerve atrophy with dementia (obsolete MONDO:0010701)","termid":"MONDO:0010701","xrefs":{"Monarch":{"xref_id":"0010701"}}}


id: GO:0008362
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Synthesis, including the chemical reactions and pathways resulting in the formation of chitin and other components, and deposition of a chitin-based embryonic cuticle by the underlying epidermal epithelium. This tough, waterproof cuticle layer is essential to provide structural integrity of the larval body. An example of this is found in Drosophila melanogaster.","definition_xrefs":["GOC:bf","GOC:mtg_sensu","PMID:12019232"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chitin-based cuticle development","termid":"GO:0040003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chitin-based embryonic cuticle biosynthetic process","synonyms":[{"name":"embryonic cuticle anabolism","type":"broad"},{"name":"embryonic cuticle biosynthetic process","type":"broad"},{"name":"embryonic cuticle formation","type":"broad"},{"name":"embryonic cuticle synthesis","type":"broad"}],"termid":"GO:0008362"}


id: MONDO:0013268
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Frontonasal dysplasia with alopecia and genital anomaly is a new phenotype of frontonasal dysplasia associated with total alopecia and hypogonadism.","definition_xrefs":["Orphanet:228390"],"direct_ancestors":[{"relation_name":"is_a","term_name":"integumentary system disorder","termid":"MONDO:0002051"},{"relation_name":"is_a","term_name":"frontonasal dysplasia","termid":"MONDO:0016643"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"frontonasal dysplasia with alopecia and genital anomaly","secondary_identifiers":["DOID:0081046","UMLS:C3150703","MEDGEN:462053","GARD:12641","OMIM:613451","SCTID:725029001"],"synonyms":[{"name":"ALX4-related FNDAG","type":"exact"},{"name":"FND2","type":"related"},{"name":"craniofrontonasal dysplasia with alopecia and hypogonadism","type":"exact"},{"name":"frontonasal dysplasia 2","type":"related"},{"name":"frontonasal dysplasia type 2","type":"exact"},{"name":"frontonasal dysplasia with alopecia and genital abnomality","type":"exact"}],"termid":"MONDO:0013268","xrefs":{"Monarch":{"xref_id":"0013268"}}}


id: MONDO:0019097
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A hemorrhagic disorder due to a platelet anomaly which occurs from birth.","gene_count":0,"genotype_count":0,"name":"obsolete hemorrhagic disorder due to a constitutional platelet anomaly (obsolete MONDO:0019097)","secondary_identifiers":["Orphanet:71202"],"synonyms":[{"name":"rare bleeding disorder due to a constitutional platelet anomaly","type":"exact"},{"name":"rare bleeding disorder due to a constitutional thrombopathy and/or thrombocytopenia","type":"exact"},{"name":"rare coagulopathy due to a constitutional platelet anomaly","type":"exact"},{"name":"rare coagulopathy due to a constitutional thrombopathy and/or thrombocytopenia","type":"exact"},{"name":"rare hemorrhagic disorder due to a constitutional platelet anomaly","type":"exact"},{"name":"rare hemorrhagic disorder due to a constitutional thrombopathy and/or thrombocytopenia","type":"exact"}],"termid":"MONDO:0019097","xrefs":{"Monarch":{"xref_id":"0019097"}}}


id: PBO:0046016
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 2 alpha kinase 2","termid":"PBO:0046016"}


id: GO:0089709
data:
  {"annotated_genes":["SJAG_03256","SJAG_03400"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97711],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0089708"},{"annotations":[104196],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090513"}]},"cv_name":"biological_process","definition":"The directed movement of L-histidine across a membrane.","definition_xrefs":["PMID:21307582"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cation transport","termid":"GO:0015695"},{"relation_name":"is_a","term_name":"aromatic amino acid transport","termid":"GO:0015801"},{"relation_name":"is_a","term_name":"azole transmembrane transport","termid":"GO:0045117"},{"relation_name":"is_a","term_name":"L-alpha-amino acid transmembrane transport","termid":"GO:1902475"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03256":null,"SJAG_03400":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"L-histidine transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0089709","terms_by_termid":{"GO:0089708":null,"GO:0090513":null}}


id: PBO:0067230
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 301, pseudogene","termid":"PBO:0067230"}


id: GO:0014052
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the regulated release of gamma-aminobutyric acid.","definition_xrefs":["GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of organic acid transport","termid":"GO:0032890"},{"relation_name":"is_a","term_name":"regulation of secretion","termid":"GO:0051046"},{"relation_name":"is_a","term_name":"regulation of amino acid transport","termid":"GO:0051955"},{"relation_name":"regulates","term_name":"gamma-aminobutyric acid secretion","termid":"GO:0014051"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of gamma-aminobutyric acid secretion","synonyms":[{"name":"regulation of GABA secretion","type":"exact"}],"termid":"GO:0014052"}


id: PBO:0000460
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit S24 (predicted)","termid":"PBO:0000460"}


id: PBO:0071461
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L32 pseudogene 2","termid":"PBO:0071461"}


id: PBO:0026970
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_plasma_membrane_sterol_distribution","termid":"PBO:0026970"}


id: GO:0090286
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which cytoskeletal filaments are directly or indirectly linked to the nuclear membrane.","definition_xrefs":["GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete cytoskeletal anchoring at nuclear membrane (obsolete GO:0090286)","termid":"GO:0090286"}


id: PR:O13728
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ain1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13728"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-actinin-like protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC15A10.08","synonyms":[{"name":"Spom972h-ain1","type":"exact"}],"termid":"PR:O13728"}


id: PBO:0001525
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF2009 protein","termid":"PBO:0001525"}


id: FYECO:0000249
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which copper(II) sulfate was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ CuSO4","synonyms":[{"name":"+ copper(II) sulfate","type":"exact"}],"termid":"FYECO:0000249"}


id: PBO:0069229
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 484, pseudogene","termid":"PBO:0069229"}


id: PBO:0002020
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorbose reductase (predicted)","termid":"PBO:0002020"}


id: MONDO:0021635
data:
  {"annotated_genes":["SJAG_00322","SJAG_03920","SJAG_02855","SJAG_01895","SJAG_00579","SJAG_00539","SJAG_03453","SJAG_02398","SJAG_03163","SJAG_00260","SJAG_01671"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85701],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010621"},{"annotations":[86094,86095],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0958175"},{"annotations":[87159],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0044792"},{"annotations":[86251],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008097"},{"annotations":[85833],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009578"},{"annotations":[85410],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008093"},{"annotations":[86212],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008192"},{"annotations":[87387],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011121"},{"annotations":[87297],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011544"},{"annotations":[86001],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007273"},{"annotations":[86209],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013602"},{"annotations":[87533],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032771"},{"annotations":[87149],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009131"}]},"cv_name":"mondo","definition":"That disease that arises from defects in the development of tissues containing cells commonly derived from the embryonic neural crest cell lineage.","definition_xrefs":["Wikipedia:Neurocristopathy"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00260":null,"SJAG_00322":null,"SJAG_00539":null,"SJAG_00579":null,"SJAG_01671":null,"SJAG_01895":null,"SJAG_02398":null,"SJAG_02855":null,"SJAG_03163":null,"SJAG_03453":null,"SJAG_03920":null},"genotype_count":0,"is_obsolete":false,"name":"neurocristopathy","references_by_uniquename":{"PB_REF:0000006":null},"synonyms":[{"name":"disorder of neural crest cell development","type":"exact"},{"name":"disorder of neural crest development","type":"exact"},{"name":"neural crest cell development disease","type":"exact"}],"termid":"MONDO:0021635","terms_by_termid":{"MONDO:0007273":null,"MONDO:0008093":null,"MONDO:0008097":null,"MONDO:0008192":null,"MONDO:0009131":null,"MONDO:0009578":null,"MONDO:0010621":null,"MONDO:0011121":null,"MONDO:0011544":null,"MONDO:0013602":null,"MONDO:0032771":null,"MONDO:0044792":null,"MONDO:0958175":null},"xrefs":{"Monarch":{"xref_id":"0021635"}}}


id: PBO:0081834
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 768","termid":"PBO:0081834"}


id: PBO:0000234
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nicotinamide mononucleotide (NMN) adenylyltransferase (predicted)","termid":"PBO:0000234"}


id: GO:0044483
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which an organism alters or subverts hemostasis in another organism via the action of a venom. Hemostasis is the mechanism that leads to cessation of bleeding from a blood vessel.","definition_xrefs":["GOC:fj","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"venom-mediated perturbation of blood circulation","termid":"GO:0140134"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"venom-mediated perturbation of hemostasis","synonyms":[{"name":"envenomation perturbing hemostasis","type":"exact"},{"name":"envenomation resulting in impairment of hemostasis in another organism","type":"exact"},{"name":"envenomation resulting in impairment of hemostasis in other organism","type":"exact"},{"name":"envenomation resulting in negative regulation of hemostasis in other organism","type":"exact"},{"name":"envenomation, impairing hemostasis in other organism","type":"exact"}],"termid":"GO:0044483"}


id: GO:1905746
data:
  {"annotated_genes":["SJAG_03279","SJAG_01040"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89838,118797],"is_not":false,"summary":null,"term":"GO:1905746"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of mRNA cis splicing, via spliceosome.","definition_xrefs":["GO_REF:0000058","PMID:2880558","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of mRNA splicing, via spliceosome","termid":"GO:0048026"},{"relation_name":"is_a","term_name":"regulation of mRNA cis splicing, via spliceosome","termid":"GO:1905744"},{"relation_name":"positively_regulates","term_name":"mRNA cis splicing, via spliceosome","termid":"GO:0045292"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01040":null,"SJAG_03279":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0016071"},{"rel_name":"regulates","termid":"GO:0016071"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0016071","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of mRNA cis splicing, via spliceosome","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1905746","terms_by_termid":{"GO:1905746":null}}


id: GO:0033971
data:
  {"annotated_genes":["SJAG_04300"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[63707],"is_not":false,"summary":null,"term":"GO:0033971"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-hydroxyisourate + H2O = 5-hydroxy-2-oxo-4-ureido-2,5-dihydro-1H-imidazole-5-carboxylate + H+.","definition_xrefs":["EC:3.5.2.17","RHEA:23736"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides","termid":"GO:0016812"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04300":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016810","GO:0016787","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"hydroxyisourate hydrolase activity","references_by_uniquename":{"GO_REF:0000003":null},"secondary_identifiers":["MetaCyc:3.5.2.17-RXN","KEGG_REACTION:R06601"],"synonyms":[{"name":"5-hydroxyisourate amidohydrolase activity","type":"related"},{"name":"5-hydroxyisourate hydrolase activity","type":"related"},{"name":"HIUHase activity","type":"related"}],"termid":"GO:0033971","terms_by_termid":{"GO:0033971":null}}


id: MONDO:0020549
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A complete hydatidiform mole or very rarely a partial mole that invades the myometrium.","definition_xrefs":["NCIT:C6985"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydatidiform mole","termid":"MONDO:0006248"},{"relation_name":"is_a","term_name":"gestational trophoblastic neoplasm","termid":"MONDO:0018944"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"invasive hydatidiform mole","secondary_identifiers":["Orphanet:99925","SCTID:416669000","GARD:19711","ICDO:9100/1","UMLS:C0008493","MEDGEN:3055","MESH:D002820","ONCOTREE:IHM"],"synonyms":[{"name":"IHM","type":"related"},{"name":"chorioadenoma","type":"exact"},{"name":"chorioadenoma Destruens","type":"exact"},{"name":"chorioadenoma destruens","type":"exact"},{"name":"invasive Mole","type":"exact"},{"name":"invasive gestational trophoblastic neoplasm","type":"exact"},{"name":"invasive hydatidiform Mole","type":"exact"},{"name":"invasive hydatidiform mole","type":"exact"}],"termid":"MONDO:0020549","xrefs":{"Monarch":{"xref_id":"0020549"}}}


id: MONDO:0011829
data:
  {"annotated_genes":["SJAG_06603"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86817],"is_not":false,"summary":null,"term":"MONDO:0011829"}]},"cv_name":"mondo","definition":"Any coenzyme Q10 deficiency in which the cause of the disease is a mutation in the COQ2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"coenzyme Q10 deficiency","termid":"MONDO:0018151"}],"gene_count":1,"genes_by_uniquename":{"SJAG_06603":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0004069","MONDO:0005066","MONDO:0005244"],"is_obsolete":false,"name":"coenzyme Q10 deficiency, primary, 1","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:764868","OMIM:607426","DOID:0070238","GARD:18378","UMLS:C3551954"],"synonyms":[{"name":"COQ10D1","type":"related"},{"name":"COQ2 coenzyme Q10 deficiency","type":"exact"},{"name":"CoQ deficiency 1","type":"related"},{"name":"Coq10 deficiency, primary, 1","type":"related"},{"name":"coenzyme Q deficiency 1","type":"related"},{"name":"coenzyme Q10 deficiency caused by mutation in COQ2","type":"exact"},{"name":"coenzyme Q10 deficiency, primary, 1","type":"exact"},{"name":"coenzyme Q10 deficiency, primary, type 1","type":"exact"},{"name":"ubiquinone deficiency 1","type":"related"}],"termid":"MONDO:0011829","terms_by_termid":{"MONDO:0011829":null},"xrefs":{"Monarch":{"xref_id":"0011829"}}}


id: MONDO:0957303
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"palmoplantar keratoderma, epidermolytic","termid":"MONDO:0968949"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"palmoplantar keratoderma, epidermolytic, 2","secondary_identifiers":["UMLS:C2936837","DOID:0070551","MEDGEN:445412","OMIM:620411"],"termid":"MONDO:0957303","xrefs":{"Monarch":{"xref_id":"0957303"}}}


id: PBO:0089750
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5'-methylthioribulose-1-phosphate dehydratase, adducin Mde1","termid":"PBO:0089750"}


id: GO:0042067
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The specification of polarized ommatidia. Ommatidia occur in two chiral forms. The trapezoidal arrangement of photoreceptors in the dorsal part of the eye is the mirror image of that in the ventral part.","definition_xrefs":["PMID:3937883","GOC:dph","PMID:3076112","GOC:ascb_2009","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of planar polarity","termid":"GO:0001736"},{"relation_name":"is_a","term_name":"establishment or maintenance of cell polarity","termid":"GO:0007163"},{"relation_name":"part_of","term_name":"compound eye morphogenesis","termid":"GO:0001745"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007163"}],"interesting_parent_ids":["GO:0008150","GO:0007163"],"is_obsolete":false,"name":"establishment of ommatidial planar polarity","synonyms":[{"name":"establishment of ommatidial polarity","type":"exact"}],"termid":"GO:0042067"}


id: PBO:0112875
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tectonin WD repeat-containing, dysferlin-like membrane trafficking protein Mug65","termid":"PBO:0112875"}


id: PBO:0042108
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 181","termid":"PBO:0042108"}


id: GO:1903184
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving L-dopa.","definition_xrefs":["GO_REF:0000068","GOC:bf","GOC:TermGenie","GOC:PARL","PMID:8822146"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified amino acid metabolic process","termid":"GO:0006575"},{"relation_name":"is_a","term_name":"aromatic amino acid metabolic process","termid":"GO:0009072"},{"relation_name":"is_a","term_name":"L-amino acid metabolic process","termid":"GO:0170033"},{"relation_name":"is_a","term_name":"non-proteinogenic amino acid metabolic process","termid":"GO:0170041"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0006520","GO:0008150"],"is_obsolete":false,"name":"L-dopa metabolic process","synonyms":[{"name":"L-dopa metabolism","type":"exact"}],"termid":"GO:1903184"}


id: GO:1905827
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of selenocysteine metabolic process.","definition_xrefs":["PMID:19716792","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of amino acid metabolic process","termid":"GO:0045764"},{"relation_name":"is_a","term_name":"positive regulation of small molecule metabolic process","termid":"GO:0062013"},{"relation_name":"is_a","term_name":"regulation of selenocysteine metabolic process","termid":"GO:1905825"},{"relation_name":"positively_regulates","term_name":"selenocysteine metabolic process","termid":"GO:0016259"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006520"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0006520","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"positive regulation of selenocysteine metabolic process","synonyms":[{"name":"activation of selenocysteine metabolic process","type":"narrow"},{"name":"activation of selenocysteine metabolism","type":"narrow"},{"name":"positive regulation of selenocysteine metabolism","type":"exact"},{"name":"up regulation of selenocysteine metabolic process","type":"exact"},{"name":"up regulation of selenocysteine metabolism","type":"exact"},{"name":"up-regulation of selenocysteine metabolic process","type":"exact"},{"name":"up-regulation of selenocysteine metabolism","type":"exact"},{"name":"upregulation of selenocysteine metabolic process","type":"exact"},{"name":"upregulation of selenocysteine metabolism","type":"exact"}],"termid":"GO:1905827"}


