# terms

id: MONDO:0030024
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with or without autistic features and/or structural brain abnormalities","secondary_identifiers":["MEDGEN:1714862","OMIM:618859","UMLS:C5394311"],"synonyms":[{"name":"NEDASB","type":"exact"},{"name":"NEURODEVELOPMENTAL DISORDER WITH OR WITHOUT AUTISTIC FEATURES AND/OR STRUCTURAL BRAIN ABNORMALITIES","type":"exact"},{"name":"neurodevelopmental disorder with or without autistic features and/or structural brain abnormalities","type":"exact"}],"termid":"MONDO:0030024","xrefs":{"Monarch":{"xref_id":"0030024"}}}


id: PBO:0074576
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA host gene 32","termid":"PBO:0074576"}


id: GO:0015692
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of lead (Pb) ions into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metal ion transport","termid":"GO:0030001"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"lead ion transport","termid":"GO:0015692"}


id: MONDO:0018176
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete polymicrogyria (obsolete MONDO:0018176)","termid":"MONDO:0018176","xrefs":{"Monarch":{"xref_id":"0018176"}}}


id: PBO:0084624
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Methionyl-tRNA formyltransferase; catalyzes formylation of mitochondria initiator Met-tRNA and residual cytosolic Met-tRNA due to inefficient translocation into the mitochondrial matrix; starvation or stationary phase entry increases Gcn2p phosphorylation-mediated cytosolic retention of Fmt1p, enhancing N-terminal protein formylation and ultimately N-end rule pathway mediated destruction that involves the Psh1p ubiquitin ligase; potential Cdc28p substrate","termid":"PBO:0084624"}


id: PBO:0003467
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RSC complex subunit Rsc4","termid":"PBO:0003467"}


id: FYPO:0006714
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more free fatty acids measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased cellular free fatty acid level","synonyms":[{"name":"increased cellular free fatty acid level during mitotic cell cycle","type":"related"},{"name":"increased cellular free fatty acid level during vegetative growth","type":"exact"},{"name":"increased free fatty acid accumulation","type":"related"}],"termid":"FYPO:0006714"}


id: GO:0044600
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: GTP + protein = diphosphate + guanylyl-protein; mediates the addition of an guanylyl (guanosine 5'-monophosphate; GMP group) to specific residues of target proteins.","definition_xrefs":["GOC:sp","PMID:20651120"],"direct_ancestors":[{"relation_name":"is_a","term_name":"guanylyltransferase activity","termid":"GO:0070568"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016779","GO:0016740"],"is_obsolete":false,"name":"protein guanylyltransferase activity","secondary_identifiers":["Reactome:R-HSA-9765952"],"termid":"GO:0044600"}


id: FYPO:0006050
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the rate, or speed, of mitotic sister chromatid separation is normal (i.e. indistinguishable from wild type). Mitotic sister chromatid separation is the process in which sister chromatids are physically detached from each other during mitosis.","definition_xrefs":["PomBase:mah","PMID:27146110"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal mitotic sister chromatid separation","termid":"FYPO:0004301"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000257","FYPO:0000002","FYPO:0001312"],"is_obsolete":false,"name":"normal rate of mitotic sister chromatid separation","synonyms":[{"name":"normal mitotic sister chromatid separation rate","type":"exact"},{"name":"normal rate of mitotic sister chromatid separation during vegetative growth","type":"exact"},{"name":"normal rate of sister chromatid separation during mitosis","type":"exact"},{"name":"normal rate of sister chromatid separation during mitotic cell cycle","type":"related"}],"termid":"FYPO:0006050"}


id: MONDO:0020292
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital heart malformation","termid":"MONDO:0019512"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital anomaly of the great arteries","secondary_identifiers":["UMLS:C0948632","MEDGEN:798768","GARD:19556","Orphanet:98724","MedDRA:10061080"],"synonyms":[{"name":"congenital aorta, aortic arch or pulmonary arteries anomaly","type":"exact"}],"termid":"MONDO:0020292","xrefs":{"Monarch":{"xref_id":"0020292"}}}


id: PBO:0113563
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oligosaccharyltransferase complex subunit, Ost4","termid":"PBO:0113563"}


id: GO:1990518
data:
  {"annotated_genes":["SJAG_04210","SJAG_00884","SJAG_00857","SJAG_02822"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[70343,107618,109465,115669],"is_not":false,"summary":null,"term":"GO:1990518"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + H2O = ADP + phosphate, in the presence of single-stranded DNA; drives the unwinding of the DNA helix in the direction 3' to 5'.","definition_xrefs":["PMID:25165823"],"direct_ancestors":[{"relation_name":"is_a","term_name":"single-stranded DNA helicase activity","termid":"GO:0017116"},{"relation_name":"is_a","term_name":"3'-5' DNA helicase activity","termid":"GO:0043138"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00857":null,"SJAG_00884":null,"SJAG_02822":null,"SJAG_04210":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0140097","GO:0016853","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"single-stranded 3'-5' DNA helicase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:1990518","terms_by_termid":{"GO:1990518":null}}


id: PBO:0059420
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S36 pseudogene 6","termid":"PBO:0059420"}


id: MONDO:0009192
data:
  {"annotated_genes":["SJAG_00690","SJAG_01942"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86061,86062],"is_not":false,"summary":null,"term":"MONDO:0009192"}]},"cv_name":"mondo","definition":"Wolcott-Rallison syndrome (WRS) is a very rare genetic disease, characterized by permanent neonatal diabetes mellitus (PNDM) with multiple epiphyseal dysplasia and other clinical manifestations, including recurrent episodes of acute liver failure.","definition_xrefs":["Orphanet:1667"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"diabetes mellitus","termid":"MONDO:0005015"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"spondyloepiphyseal dysplasia","termid":"MONDO:0016761"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00690":null,"SJAG_01942":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0005497","MONDO:0006025"],"is_obsolete":false,"name":"Wolcott-Rallison syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NCIT:C131007","GARD:5589","icd11.foundation:2096915129","MEDGEN:140926","SCTID:254066006","UMLS:C0432217","MESH:C536739","DOID:0090060","OMIM:226980"],"synonyms":[{"name":"IDDM-MED syndrome","type":"related"},{"name":"Iddm-Med syndrome","type":"related"},{"name":"MED-IDDM syndrome","type":"related"},{"name":"Med-Iddm syndrome","type":"related"},{"name":"WRS","type":"exact"},{"name":"Wolcott Rallison syndrome","type":"related"},{"name":"Wolcott-Rallison syndrome","type":"exact"},{"name":"early-onset diabetes mellitus with multiple epiphyseal dysplasia","type":"exact"},{"name":"epiphyseal dysplasia multiple with early-onset diabetes mellitus","type":"related"},{"name":"epiphyseal dysplasia, multiple, with early-onset diabetes mellitus","type":"related"}],"termid":"MONDO:0009192","terms_by_termid":{"MONDO:0009192":null},"xrefs":{"Monarch":{"xref_id":"0009192"}}}


id: PBO:0071835
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S2 pseudogene 30","termid":"PBO:0071835"}


id: PBO:0079503
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thioredoxin pseudogene 1","termid":"PBO:0079503"}


id: PBO:0036035
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_histone_H4-K20_trimethylation_during_vegetative_growth","termid":"PBO:0036035"}


id: GO:0006109
data:
  {"annotated_genes":["SJAG_01376","SJAG_01255","SJAG_05006","SJAG_04668","SJAG_02278","SJAG_01402","SJAG_02785","SJAG_04659","SJAG_01787","SJAG_04462","SJAG_03705","SJAG_00424","SJAG_00698","SJAG_04771","SJAG_04666","SJAG_04509","SJAG_00963","SJAG_00610","SJAG_00534","SJAG_05314","SJAG_00685"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93345,112264],"is_not":false,"summary":null,"term":"GO:0006109"},{"annotations":[79221,77548],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045719"},{"annotations":[73435,76398],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045820"},{"annotations":[96936],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001172"},{"annotations":[90055],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905857"},{"annotations":[92785,87875],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140748"},{"annotations":[88252],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032951"},{"annotations":[106289,91132,103209,92769,118420,105715,118290],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090334"},{"annotations":[89801,95307,92791,103211],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070610"},{"annotations":[75490],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010906"},{"annotations":[70471],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006110"},{"annotations":[76397],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043456"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving carbohydrates.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of primary metabolic process","termid":"GO:0080090"},{"relation_name":"regulates","term_name":"carbohydrate metabolic process","termid":"GO:0005975"}],"gene_count":21,"genes_by_uniquename":{"SJAG_00424":null,"SJAG_00534":null,"SJAG_00610":null,"SJAG_00685":null,"SJAG_00698":null,"SJAG_00963":null,"SJAG_01255":null,"SJAG_01376":null,"SJAG_01402":null,"SJAG_01787":null,"SJAG_02278":null,"SJAG_02785":null,"SJAG_03705":null,"SJAG_04462":null,"SJAG_04509":null,"SJAG_04659":null,"SJAG_04666":null,"SJAG_04668":null,"SJAG_04771":null,"SJAG_05006":null,"SJAG_05314":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"regulation of carbohydrate metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"regulation of carbohydrate metabolism","type":"exact"}],"termid":"GO:0006109","terms_by_termid":{"GO:0006109":null,"GO:0006110":null,"GO:0010906":null,"GO:0032951":null,"GO:0043456":null,"GO:0045719":null,"GO:0045820":null,"GO:0070610":null,"GO:0090334":null,"GO:0140748":null,"GO:1905857":null,"GO:2001172":null}}


id: GO:0034493
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The volume enclosed by the melanosome membrane.","definition_xrefs":["GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic vesicle lumen","termid":"GO:0060205"},{"relation_name":"part_of","term_name":"melanosome","termid":"GO:0042470"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0031410","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"melanosome lumen","termid":"GO:0034493"}


id: FYPO:0007004
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which histone exchange occurs to a lower extent than normal in regions containing protein coding genes. Histone exchange is replacement, within chromatin, of resident histones or histone subunits with alternative, sometimes variant, histones or subunits.","definition_xrefs":["GO:0005721","GO:0043486","PMID:26518661","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization during vegetative growth","termid":"FYPO:0000443"},{"relation_name":"is_a","term_name":"abnormal chromatin organization during vegetative growth","termid":"FYPO:0001352"},{"relation_name":"is_a","term_name":"abnormal chromatin remodeling","termid":"FYPO:0006356"},{"relation_name":"is_a","term_name":"abnormal histone turnover","termid":"FYPO:0007472"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0000138","FYPO:0005447","FYPO:0000641"],"is_obsolete":false,"name":"decreased histone turnover at protein coding gene during vegetative growth","synonyms":[{"name":"decreased histone exchange at protein coding gene during mitotic cell cycle","type":"related"},{"name":"reduced histone exchange at protein coding gene during vegetative growth","type":"exact"}],"termid":"FYPO:0007004"}


id: PBO:0013084
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L36, MrpL36/YmL36 (predicted)","termid":"PBO:0013084"}


id: PBO:0047001
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 90 member A4, pseudogene","termid":"PBO:0047001"}


id: PBO:0083160
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; almost completely overlaps the verified gene CAF20","termid":"PBO:0083160"}


id: GO:0042751
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which an organism enters and maintains a period of dormancy, similar to hibernation, but that occurs during the summer. It insulates against heat to prevent the harmful effects of the season.","definition_xrefs":["GOC:jl","Wikipedia:Estivation","PMID:12443930"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dormancy process","termid":"GO:0022611"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"estivation","synonyms":[{"name":"aestivation","type":"exact"}],"termid":"GO:0042751"}


id: PBO:0029060
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-small_vacuoles_present_in_increased_numbers_during_stationary_phase","termid":"PBO:0029060"}


id: GO:0100002
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any protein phosphorylation process that negatively regulates protein kinase activity.","definition_xrefs":["GOC:obol","GOC:cjm"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of protein kinase activity by protein phosphorylation (obsolete GO:0100002)","termid":"GO:0100002"}


id: PBO:0085054
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Non-essential protein of unknown function; involved in signal transduction and the genotoxic response; induced rapidly in response to treatment with 8-methoxypsoralen and UVA irradiation; relocalizes from ER to cytoplasm upon DNA replication stress; ECM3 has a paralog, YNL095C, that arose from the whole genome duplication","termid":"PBO:0085054"}


id: MONDO:0001269
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disorder affecting the sclera. Examples include inflammatory processes (e.g., scleritis and episcleritis), and degenerative processes. Primary tumors of the sclera are extremely rare.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eye disorder","termid":"MONDO:0005328"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"scleral disorder","secondary_identifiers":["NCIT:C79717","MESH:D015422","MEDGEN:11345","SCTID:33064008","UMLS:C0036412","DOID:11343","ICD9:379.19"],"synonyms":[{"name":"disease of sclera","type":"exact"},{"name":"disease or disorder of sclera","type":"exact"},{"name":"disorder of sclera","type":"exact"},{"name":"sclera disease","type":"exact"},{"name":"sclera disease or disorder","type":"exact"},{"name":"sclera disorder","type":"exact"},{"name":"scleral disorder","type":"exact"}],"termid":"MONDO:0001269","xrefs":{"Monarch":{"xref_id":"0001269"}}}


id: PBO:0060953
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear factor kappa B subunit 1","termid":"PBO:0060953"}


id: MONDO:0007708
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Kasabach-Merritt syndrome (KMS), also known as hemangioma-thrombocytopenia syndrome, is a rare disorder characterized by profound thrombocytopenia, microangiopathic hemolytic anemia, and subsequent consumptive coagulopathy in association with vascular tumors, particularly kaposiform hemangioendothelioma or tufted angioma.","definition_xrefs":["Orphanet:2330"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Kasabach-Merritt syndrome","secondary_identifiers":["OMIM:141000","SCTID:86635005","MESH:D059885","NCIT:C3821","GARD:70","NANDO:2201035","NANDO:2100297","MedDRA:10058423","UMLS:C0221025","icd11.foundation:2059601885","ICD9:287.39","MEDGEN:65122"],"synonyms":[{"name":"KMP","type":"related"},{"name":"Kasabach Merritt phenomenon","type":"exact"},{"name":"Kasabach Merritt syndrome","type":"exact"},{"name":"Kasabach-Merritt Phenomenon","type":"exact"},{"name":"Kasabach-Merritt syndrome","type":"exact"},{"name":"hemangioma thrombocytopenia syndrome","type":"related"},{"name":"hemangioma-hemorrhage syndrome","type":"exact"},{"name":"hemangioma-thrombocytopenia syndrome","type":"exact"},{"name":"hemangiomatosis with thrombocytopenia","type":"exact"},{"name":"thrombocytopenia-hemangioma syndrome","type":"exact"},{"name":"thrombopenia-hemangioma syndrome","type":"exact"}],"termid":"MONDO:0007708","xrefs":{"Monarch":{"xref_id":"0007708"}}}


id: PR:O60146
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- can1 gene.","definition_xrefs":["UniProtKB:O60146","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized transporter C18H10.16 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC18H10.16","synonyms":[{"name":"Spom972h-can1","type":"exact"}],"termid":"PR:O60146"}


id: GO:0019319
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of hexose, any monosaccharide with a chain of six carbon atoms in the molecule.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexose metabolic process","termid":"GO:0019318"},{"relation_name":"is_a","term_name":"monosaccharide biosynthetic process","termid":"GO:0046364"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975","GO:0044281"],"is_obsolete":false,"name":"hexose biosynthetic process","synonyms":[{"name":"hexose anabolism","type":"exact"},{"name":"hexose biosynthesis","type":"exact"},{"name":"hexose formation","type":"exact"},{"name":"hexose synthesis","type":"exact"}],"termid":"GO:0019319"}


id: GO:0043778
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cobalt-precorrin 8 = cobyrinate.","definition_xrefs":["MetaCyc:RXN-8768"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular acyltransferase activity","termid":"GO:0016867"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016853","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"cobalt-precorrin-8 methylmutase activity","secondary_identifiers":["RHEA:16209","EC:5.4.99.60"],"synonyms":[{"name":"cobalt-precorrin 8 methylmutase activity","type":"exact"},{"name":"cobalt-precorrin 8X methylmutase activity","type":"exact"},{"name":"cobalt-precorrin-8X methylmutase activity","type":"exact"}],"termid":"GO:0043778"}


id: PBO:0069710
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 990, pseudogene","termid":"PBO:0069710"}


id: PBO:0035852
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_cytoplasmic_microtubule_nucleation_during_mitotic_interphase","termid":"PBO:0035852"}


id: GO:1905455
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of myeloid progenitor cell differentiation.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:27010503"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of hematopoietic progenitor cell differentiation","termid":"GO:1901534"},{"relation_name":"is_a","term_name":"regulation of myeloid progenitor cell differentiation","termid":"GO:1905453"},{"relation_name":"positively_regulates","term_name":"myeloid progenitor cell differentiation","termid":"GO:0002318"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of myeloid progenitor cell differentiation","synonyms":[{"name":"activation of myeloid progenitor cell differentiation","type":"narrow"},{"name":"up regulation of myeloid progenitor cell differentiation","type":"exact"},{"name":"up-regulation of myeloid progenitor cell differentiation","type":"exact"},{"name":"upregulation of myeloid progenitor cell differentiation","type":"exact"}],"termid":"GO:1905455"}


id: PBO:0013092
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. japonicus gtb1","termid":"PBO:0013092"}


id: PBO:0111890
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-UBR1 type","termid":"PBO:0111890"}


id: PBO:0113168
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Integral membrane peptide transporter; mediates transport of di- and tri-peptides; conserved protein that contains 12 transmembrane domains; PTR2 expression is regulated by N-end rule pathway via repression by Cup9p; targeted to vacuole via AP-3 pathway","termid":"PBO:0113168"}


id: PR:Q9P7H1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A tyrosine-protein phosphatase Clp1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PomBase:MAH","PMID:11683392"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tyrosine-protein phosphatase Clp1","termid":"PR:000027623"},{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tyrosine-protein phosphatase Clp1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1782.09c","secondary_identifiers":["UniProtKB:Q9P7H1","PR:000027624"],"synonyms":[{"name":"CDC fourteen-like phosphatase 1","type":"exact"},{"name":"CLP1","type":"related"},{"name":"FLP1","type":"related"},{"name":"SPAC1782.09C","type":"related"},{"name":"Spom972h-clp1","type":"exact"},{"name":"tyrosine-protein phosphatase CDC14 homolog","type":"exact"}],"termid":"PR:Q9P7H1"}


id: PBO:0030295
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cell-substrate_adhesion","termid":"PBO:0030295"}


id: MONDO:0957997
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diabetes, deafness, developmental delay, and short stature syndrome","secondary_identifiers":["MEDGEN:1845412","OMIM:620651","UMLS:C5882732"],"termid":"MONDO:0957997","xrefs":{"Monarch":{"xref_id":"0957997"}}}


id: PBO:0083968
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Glucoamylase (glucan 1,4-alpha-glucosidase); allows yeast to degrade starch","termid":"PBO:0083968"}


id: FYPO:0007646
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a vegetatively growing cell has one or more septa, and one nucleus that is not in the normal location. The cell also has one or more compartments with no nucleus.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"septated vegetative cell","termid":"FYPO:0002342"},{"relation_name":"is_a","term_name":"mononucleate vegetative cell with mislocalized nucleus","termid":"FYPO:0006339"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000138","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"septated mononucleate vegetative cell with mislocalized nucleus and anucleate compartment","synonyms":[{"name":"cytokinesis in the absence of nuclear division","type":"related"},{"name":"cytokinesis without nuclear division","type":"related"},{"name":"mononucleate septated vegetative cell with mislocalized nucleus","type":"exact"},{"name":"septated mononucleate cell","type":"exact"},{"name":"septated mononucleate cell with abnormal nucleus location","type":"exact"},{"name":"septated mononucleate cell with abnormal nucleus position","type":"exact"},{"name":"septated mononucleate cell with asymmetrically localized nucleus","type":"exact"},{"name":"septated mononucleate cell with displaced nucleus","type":"exact"},{"name":"septated mononucleate cell with mislocalised nucleus","type":"exact"},{"name":"septated mononucleate cell with mislocalized nucleus during vegetative growth","type":"exact"},{"name":"septated mononucleate cell with misplaced nucleus","type":"exact"},{"name":"septated mononucleate vegetative cell with mislocalized nucleus","type":"exact"},{"name":"septated mononucleate vegetative cell with mislocalized nucleus during mitotic cell cycle","type":"related"},{"name":"septated vegetative cell with mislocalized mononucleus","type":"exact"},{"name":"septation in the absence of nuclear division","type":"related"},{"name":"septation independent of mitosis","type":"related"},{"name":"septation without nuclear division","type":"related"}],"termid":"FYPO:0007646"}


id: MONDO:0006870
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete noma (obsolete MONDO:0006870)","termid":"MONDO:0006870","xrefs":{"Monarch":{"xref_id":"0006870"}}}


id: PBO:0045617
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox 4 like 28 (pseudogene)","termid":"PBO:0045617"}


id: PBO:0035876
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_ubiquitination_during_vegetative_growth","termid":"PBO:0035876"}


id: GO:0016025
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete proteasome endopeptidase regulator (obsolete GO:0016025)","synonyms":[{"name":"proteasome endopeptidase regulator","type":"exact"}],"termid":"GO:0016025"}


id: PBO:0003880
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U2 snRNP-associated protein SF3B14 ortholog (predicted)","termid":"PBO:0003880"}


id: GO:0007166
data:
  {"annotated_genes":["SJAG_02823","SJAG_02258"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[105899,108823],"is_not":false,"summary":null,"term":"GO:0007166"}]},"cv_name":"biological_process","definition":"The series of molecular signals initiated by an extracellular ligand binding to a receptor located on the cell surface. The pathway ends with regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signal transduction","termid":"GO:0007165"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02258":null,"SJAG_02823":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"cell surface receptor signaling pathway","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-73887"],"synonyms":[{"name":"cell surface receptor linked signal transduction","type":"exact"},{"name":"cell surface receptor linked signaling pathway","type":"exact"},{"name":"cell surface receptor linked signalling pathway","type":"exact"}],"termid":"GO:0007166","terms_by_termid":{"GO:0007166":null}}


id: MONDO:0016827
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myopathy-growth delay-intellectual disability-hypospadias syndrome","secondary_identifiers":["Orphanet:2601"],"termid":"MONDO:0016827","xrefs":{"Monarch":{"xref_id":"0016827"}}}


id: PATO:0001056
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001056 number (obsolete PATO:0001056)","termid":"PATO:0001056"}


id: MONDO:0006154
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An extranodal marginal zone lymphoma of mucosa-associated lymphoid tissue that arises from the colon.","definition_xrefs":["NCIT:C5498"],"direct_ancestors":[{"relation_name":"is_a","term_name":"colon lymphoma","termid":"MONDO:0002035"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"colon mucosa-associated lymphoid tissue lymphoma","secondary_identifiers":["EFO:1000186","MEDGEN:272492","UMLS:C1333096"],"synonyms":[{"name":"MALT lymphoma of colon","type":"exact"},{"name":"MALT lymphoma of the colon","type":"exact"},{"name":"MALToma of colon","type":"exact"},{"name":"MALToma of the colon","type":"exact"},{"name":"colon MALT lymphoma","type":"exact"},{"name":"colon MALToma","type":"exact"},{"name":"colonic MALT lymphoma","type":"exact"},{"name":"colonic MALToma","type":"exact"},{"name":"colonic mucosa-associated lymphoid tissue lymphoma","type":"exact"}],"termid":"MONDO:0006154","xrefs":{"Monarch":{"xref_id":"0006154"}}}


id: PBO:0029247
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_localization_to_kinetochore_during_vegetative_growth","termid":"PBO:0029247"}


id: GO:0009688
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of abscisic acid, 5-(1-hydroxy-2,6,6,trimethyl-4-oxocyclohex-2-en-1-y1)-3-methylpenta-2,4-dienoic acid.","definition_xrefs":["ISBN:0387969845"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abscisic acid metabolic process","termid":"GO:0009687"},{"relation_name":"is_a","term_name":"sesquiterpenoid biosynthetic process","termid":"GO:0016106"},{"relation_name":"is_a","term_name":"apocarotenoid biosynthetic process","termid":"GO:0043289"},{"relation_name":"is_a","term_name":"monocarboxylic acid biosynthetic process","termid":"GO:0072330"},{"relation_name":"is_a","term_name":"olefinic compound biosynthetic process","termid":"GO:0120255"},{"relation_name":"is_a","term_name":"tertiary alcohol biosynthetic process","termid":"GO:1902645"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629","GO:0044281"],"is_obsolete":false,"name":"abscisic acid biosynthetic process","secondary_identifiers":["MetaCyc:PWY-695"],"synonyms":[{"name":"abscisic acid anabolism","type":"exact"},{"name":"abscisic acid biosynthesis","type":"exact"},{"name":"abscisic acid formation","type":"exact"},{"name":"abscisic acid synthesis","type":"exact"}],"termid":"GO:0009688"}


id: PBO:0046939
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 66 member A","termid":"PBO:0046939"}


id: PBO:0055768
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lunapark, ER junction formation factor","termid":"PBO:0055768"}


id: GO:0072598
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained at, a location in a chloroplast.","definition_xrefs":["GOC:ecd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to organelle","termid":"GO:0033365"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein localization to chloroplast","synonyms":[{"name":"protein localisation to chloroplast","type":"exact"}],"termid":"GO:0072598"}


id: GO:0160228
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a sodium ion by a channel that opens when bile acid has been bound by the channel complex or one of its constituent parts.","definition_xrefs":["PMID:22735174"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sodium channel activity","termid":"GO:0005272"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"bile acid-gated sodium channel activity","termid":"GO:0160228"}


id: PBO:0116302
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Leucine-zipper transcriptional activator; regulates the sulfur amino acid pathway; requires different combinations of auxiliary factors Cbf1p, Met28p, Met31p and Met32p; specific involvement in sulfur starvation-induced autophagy with Gcn4p; feedforward loop exists in the regulation of genes controlled by Met4p and Met32p; ubiquitinated by SCF-Met30p, leading to either degradation or maintenance in an inactive state; regulates degradation of its DNA-binding cofactors by SCF-Met30p targeting","termid":"PBO:0116302"}


id: MONDO:0001270
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"bladder calculus","termid":"MONDO:0006678"},{"relation_name":"is_a","term_name":"bladder diverticulum","termid":"MONDO:0007197"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stone in bladder diverticulum","secondary_identifiers":["MEDGEN:510220","SCTID:18109005","ICD9:594.0","DOID:11354","UMLS:C0156265"],"synonyms":[{"name":"calculus in diverticulum of bladder","type":"exact"}],"termid":"MONDO:0001270","xrefs":{"Monarch":{"xref_id":"0001270"}}}


id: PBO:0066900
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 200","termid":"PBO:0066900"}


id: PBO:0050430
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein K pseudogene 1","termid":"PBO:0050430"}


id: MOD:01609
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-tryptophan residue to 7'-hydroxy-2'-alpha-mannosyl-L-tryptophan.","definition_xrefs":["RESID:AA0506","PubMed:19584055"],"direct_ancestors":[{"relation_name":"has_functional_parent","term_name":"2'-alpha-mannosyl-L-tryptophan","termid":"MOD:00222"},{"relation_name":"has_functional_parent","term_name":"7'-hydroxy-L-tryptophan","termid":"MOD:01664"},{"relation_name":"is_a","term_name":"modified L-tryptophan residue","termid":"MOD:00918"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"7'-hydroxy-2'-alpha-mannosyl-L-tryptophan","synonyms":[{"name":"(2S)-2-amino-3-[7-hydroxy-2-(alpha-D-mannopyranosyl)-1H-indol-3-yl]propanoic acid","type":"exact"},{"name":"7'-hydroxy-2'-alpha-mannosyl-L-tryptophan","type":"exact"},{"name":"CARBOHYD C-linked (Man) hydroxytryptophan","type":"exact"}],"termid":"MOD:01609"}


id: MONDO:0002980
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete myofibroma (obsolete MONDO:0002980)","termid":"MONDO:0002980","xrefs":{"Monarch":{"xref_id":"0002980"}}}


id: PBO:0016541
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic RECombination deficient","termid":"PBO:0016541"}


id: PBO:0057567
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 762","termid":"PBO:0057567"}


id: PBO:0060792
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase core subunit S3","termid":"PBO:0060792"}


id: FYPO:0005985
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to acetic acid. Cells stop growing (and may die) at a concentration of acetic acid that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0005447","FYPO:0000139","FYPO:0001985","FYPO:0002683"],"is_obsolete":false,"name":"sensitive to acetic acid","synonyms":[{"name":"hypersensitive to acetic acid","type":"exact"},{"name":"sensitive to acetic acid during mitotic cell cycle","type":"related"},{"name":"sensitive to acetic acid during vegetative growth","type":"exact"}],"termid":"FYPO:0005985"}


id: PBO:0051215
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 5-51","termid":"PBO:0051215"}


id: PBO:0064581
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POTE ankyrin domain family member B3","termid":"PBO:0064581"}


id: GO:0036054
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: protein-malonyllysine + H2O => protein-lysine + malonate. This reaction is the removal of a malonyl group (CO-CH2-CO) from a malonylated lysine residue of a protein or peptide.","definition_xrefs":["GOC:sp","PMID:21908771","PMID:22076378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"}],"interesting_parent_ids":["GO:0140096","GO:0016787","GO:0003674","GO:0016810","GO:0003824"],"is_obsolete":false,"name":"protein-malonyllysine demalonylase activity","synonyms":[{"name":"peptidyl-malonyllysine demalonylase activity","type":"exact"},{"name":"protein lysine demalonylation activity","type":"exact"},{"name":"protein malonyl lysine demalonylation activity","type":"exact"}],"termid":"GO:0036054"}


id: PR:Q10248
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC4G9.20c gene.","definition_xrefs":["UniProtKB:Q10248","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized mitochondrial carrier C4G9.20c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4G9.20c","synonyms":[{"name":"Spom972h-SPAC4G9.20c","type":"exact"}],"termid":"PR:Q10248"}


id: PBO:0075701
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SREK1IP1 pseudogene 1","termid":"PBO:0075701"}


id: PATO:0001099
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001099 relative force (obsolete PATO:0001099)","termid":"PATO:0001099"}


id: SO:0001991
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A consensus AFLP fragment is an AFLP sequence produced from any alignment algorithm which uses assembled multiple AFLP sequences as input.","definition_xrefs":["GMOD:ea"],"direct_ancestors":[{"relation_name":"is_a","term_name":"consensus_region","termid":"SO:0000994"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"consensus_AFLP_fragment","synonyms":[{"name":"consensus AFLP fragment","type":"exact"},{"name":"consensus amplified fragment length polymorphism fragment","type":"exact"}],"termid":"SO:0001991"}


id: PBO:0090610
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphomethylpyrimidine kinase","termid":"PBO:0090610"}


id: PBO:0026765
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_tRNA_wobble_position_uridine_thiolation","termid":"PBO:0026765"}


id: MONDO:0006560
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Reduced sweating. Causes include burns, dehydration, radiation, and leprosy.","definition_xrefs":["NCIT:P378"],"gene_count":0,"genotype_count":0,"name":"obsolete hypohidrosis (obsolete MONDO:0006560)","secondary_identifiers":["DOID:11155","Wikipedia:Hypodidrosis","MESH:D007007","SCTID:45004005","HP:0000966","ICD10CM:L74.4"],"synonyms":[{"name":"Oligohidrosis","type":"exact"}],"termid":"MONDO:0006560","xrefs":{"Monarch":{"xref_id":"0006560"}}}


id: GO:1904790
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of shelterin complex assembly.","definition_xrefs":["GOC:BHF_telomere","GO_REF:0000058","GOC:TermGenie","PMID:24270157","GOC:nc","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein-containing complex assembly","termid":"GO:0043254"},{"relation_name":"regulates","term_name":"shelterin complex assembly","termid":"GO:0071573"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0065003","GO:0044085"],"is_obsolete":false,"name":"regulation of shelterin complex assembly","synonyms":[{"name":"regulation of Pot1 complex assembly","type":"exact"},{"name":"regulation of Pot1-Tpz1 complex assembly","type":"exact"},{"name":"regulation of shelterin complex formation","type":"exact"},{"name":"regulation of telosome assembly","type":"exact"}],"termid":"GO:1904790"}


id: PBO:0034062
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-existence_ends_during_or_before","termid":"PBO:0034062"}


id: MONDO:0017250
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital pulmonary airway malformation","termid":"MONDO:0016580"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital pulmonary airway malformation type 2","secondary_identifiers":["MEDGEN:1738105","GARD:21095","UMLS:C5437761","Orphanet:280840","icd11.foundation:1921224131"],"synonyms":[{"name":"CCAM type 2","type":"exact"},{"name":"CPAM type 2","type":"exact"},{"name":"congenital cystic adenomatoid malformation of the lung type 2","type":"exact"},{"name":"congenital cystic adenomatous malformation of the lung type 2","type":"exact"},{"name":"congenital cystic disease of the lung type 2","type":"exact"}],"termid":"MONDO:0017250","xrefs":{"Monarch":{"xref_id":"0017250"}}}


id: MONDO:0019531
data:
  {"annotated_genes":["SJAG_01162"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87227],"is_not":false,"summary":null,"term":"MONDO:0019531"}]},"cv_name":"mondo","definition":"Haemolytic anemia due to glutathione reductase (GSR) deficiency is characterized by nearly complete absence of GSR activity in erythrocytes.","definition_xrefs":["Orphanet:90030"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nonspherocytic hemolytic anemia","termid":"MONDO:0006506"},{"relation_name":"is_a","term_name":"inherited glutathione metabolism disease","termid":"MONDO:0040566"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01162":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002280"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0019241"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0002280","MONDO:0019241","MONDO:0005066","MONDO:0005570"],"is_obsolete":false,"name":"hemolytic anemia due to glutathione reductase deficiency","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C5231513","MEDGEN:1684855","MONDO:0032856","OMIM:618660","GARD:16784"],"synonyms":[{"name":"hemolytic anemia due to glutathione reductase deficiency","type":"exact"}],"termid":"MONDO:0019531","terms_by_termid":{"MONDO:0019531":null},"xrefs":{"Monarch":{"xref_id":"0019531"}}}


id: PBO:0051540
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IL6 antisense RNA 1","termid":"PBO:0051540"}


id: PBO:0083635
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eIF3c subunit of the eukaryotic translation initiation factor 3 (eIF3); involved in the assembly of preinitiation complex and start codon selection; eIF3 is also involved in programmed stop codon readthrough","termid":"PBO:0083635"}


id: PBO:0039659
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adaptor related protein complex 2 subunit beta 1","termid":"PBO:0039659"}


id: GO:0006301
data:
  {"annotated_genes":["SJAG_01044","SJAG_04190","SJAG_00819","SJAG_04816","SJAG_16460","SJAG_04089","SJAG_02667","SJAG_03898","SJAG_00406","SJAG_02521","SJAG_02918","SJAG_00573","SJAG_01221","SJAG_00611","SJAG_00153","SJAG_03906","SJAG_04791","SJAG_00208"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[77566,88369,88992,96374,98603,104788,117169,117489],"is_not":false,"summary":null,"term":"GO:0006301"},{"annotations":[99665,61146,103241,104585,70837,67104],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070987"},{"annotations":[73648,78345,70835,78076,104586,103242,96237,75439],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042276"},{"annotations":[112142],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1904332"},{"annotations":[98665],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019985"}]},"cv_name":"biological_process","definition":"The conversion of DNA-damage induced single-stranded gaps into large molecular weight DNA after replication. Includes pathways that remove replication-blocking lesions in conjunction with DNA replication.","definition_xrefs":["GOC:elh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA repair","termid":"GO:0006281"}],"gene_count":18,"genes_by_uniquename":{"SJAG_00153":null,"SJAG_00208":null,"SJAG_00406":null,"SJAG_00573":null,"SJAG_00611":null,"SJAG_00819":null,"SJAG_01044":null,"SJAG_01221":null,"SJAG_02521":null,"SJAG_02667":null,"SJAG_02918":null,"SJAG_03898":null,"SJAG_03906":null,"SJAG_04089":null,"SJAG_04190":null,"SJAG_04791":null,"SJAG_04816":null,"SJAG_16460":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006281","GO:0006259","GO:0008150"],"is_obsolete":false,"name":"postreplication repair","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"secondary_identifiers":["Wikipedia:Postreplication_repair"],"synonyms":[{"name":"postreplication DNA repair","type":"exact"}],"termid":"GO:0006301","terms_by_termid":{"GO:0006301":null,"GO:0019985":null,"GO:0042276":null,"GO:0070987":null,"GO:1904332":null}}


id: GO:0035146
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The joining of specific branches of a tubular system to form a continuous network.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tube morphogenesis","termid":"GO:0035239"},{"relation_name":"part_of","term_name":"branching morphogenesis of an epithelial tube","termid":"GO:0048754"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tube fusion","termid":"GO:0035146"}


id: PR:O14297
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC9E9.15 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14297"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C9E9.15 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC9E9.15","synonyms":[{"name":"Spom972h-SPAC9E9.15","type":"exact"}],"termid":"PR:O14297"}


id: GO:0005136
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an interleukin-4 receptor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor binding","termid":"GO:0005126"},{"relation_name":"is_a","term_name":"growth factor receptor binding","termid":"GO:0070851"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"interleukin-4 receptor binding","synonyms":[{"name":"IL-4","type":"narrow"},{"name":"interleukin-4 receptor ligand","type":"narrow"}],"termid":"GO:0005136"}


id: PBO:0054376
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1772","termid":"PBO:0054376"}


id: PBO:0046091
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 4A2 pseudogene 2","termid":"PBO:0046091"}


id: FYPO:0002097
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a protein kinase activity is decreased during a cellular response to hydroxyurea.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein kinase activity","termid":"FYPO:0001382"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0001985","FYPO:0000654","FYPO:0000652","FYPO:0000661"],"is_obsolete":false,"name":"decreased protein kinase activity during cellular response to hydroxyurea","synonyms":[{"name":"decreased protein kinase activity during cellular response to HU","type":"exact"},{"name":"reduced protein kinase activity during cellular response to HU","type":"exact"},{"name":"reduced protein kinase activity during cellular response to hydroxyurea","type":"exact"}],"termid":"FYPO:0002097"}


id: PATO:0000384
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A biological sex quality inhering in an individual or a population whose sex organs contain only male gametes.","definition_xrefs":["MGED:MGED"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenotypic sex","termid":"PATO:0001894"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"male","termid":"PATO:0000384"}


id: PBO:0064781
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase, Mg2+/Mn2+ dependent 1B","termid":"PBO:0064781"}


id: PBO:0067258
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 332, pseudogene","termid":"PBO:0067258"}


id: GO:0010748
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of plasma membrane long-chain fatty acid transport. Plasma membrane long-chain fatty acid transport is the directed movement of long-chain fatty acids across the plasma membrane.","definition_xrefs":["GOC:BHF","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of long-chain fatty acid import across plasma membrane","termid":"GO:0010746"},{"relation_name":"is_a","term_name":"negative regulation of transmembrane transport","termid":"GO:0034763"},{"relation_name":"is_a","term_name":"negative regulation of long-chain fatty acid import into cell","termid":"GO:0140213"},{"relation_name":"negatively_regulates","term_name":"long-chain fatty acid import across plasma membrane","termid":"GO:0015911"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"negative regulation of long-chain fatty acid import across plasma membrane","synonyms":[{"name":"negative regulation of plasma membrane long-chain fatty acid transport","type":"exact"}],"termid":"GO:0010748"}


id: GO:0043459
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a single or short exposure to a lithium ion stimulus.","definition_xrefs":["PMID:10208444"],"gene_count":0,"genotype_count":0,"name":"obsolete response to short exposure to lithium ion (obsolete GO:0043459)","synonyms":[{"name":"response to short exposure to lithium ion","type":"exact"}],"termid":"GO:0043459"}


id: MONDO:0957462
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"pulmonary tuberculosis","termid":"MONDO:0006052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"primary pulmonary tuberculosis","secondary_identifiers":["icd11.foundation:882244568","Orphanet:645814"],"termid":"MONDO:0957462","xrefs":{"Monarch":{"xref_id":"0957462"}}}


id: PBO:0089735
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"karyopherin/importin-beta family nuclear import receptor Los1","termid":"PBO:0089735"}


id: MONDO:0009224
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Fetal iodine syndrome refers to symptoms and signs that may be observed in a fetus or newborn when the mother was exposed during pregnancy to inappropriate (insufficient or excessive) amounts of iodine. Iodine deficiency is associated with goiter and hypothyroidism. When severe iodine deficiency occurs during pregnancy, it is associated with congenital hypothyroidism that is manifested by increased neonatal morbi-mortality and severe mental dysfunction, hyperactivity, attention disorders and a substantial decrease of IQ of an irreversible nature. Excessive iodine ingestion during the third trimester of pregnancy can result in hypothyroidism and fetal goiter due to a prolonged inhibition of thyroid hormone synthesis, an increase in thyrotropin (TSH).","definition_xrefs":["Orphanet:1910"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transient congenital hypothyroidism due to maternal factor","termid":"MONDO:0016555"},{"relation_name":"is_a","term_name":"toxic or drug-related embryofetopathy","termid":"MONDO:0016677"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fetal iodine syndrome","secondary_identifiers":["OMIM:228355","SCTID:718228001","UMLS:C4273860","MEDGEN:907922","GARD:2304"],"synonyms":[{"name":"FIDD","type":"related"},{"name":"endemic cretinism","type":"related"},{"name":"fetal iodine deficiency disorder","type":"related"},{"name":"foetal iodine deficiency disorder","type":"related"}],"termid":"MONDO:0009224","xrefs":{"Monarch":{"xref_id":"0009224"}}}


id: PBO:0089435
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyoxylase III Sdj1-like","termid":"PBO:0089435"}


id: GO:0035950
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of oligopeptide transport, by regulation of transcription from an RNA polymerase II promoter.","definition_xrefs":["GOC:dgf","PMID:17005992"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of oligopeptide transport by regulation of transcription from RNA polymerase II promoter (obsolete GO:0035950)","synonyms":[{"name":"regulation of oligopeptide transport by regulation of transcription from Pol II promoter","type":"exact"}],"termid":"GO:0035950"}


id: GO:0140408
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of mRNA alternative polyadenylation.","definition_xrefs":["PMID:29507755"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mRNA 3'-end processing","termid":"GO:0031440"},{"relation_name":"regulates","term_name":"mRNA alternative polyadenylation","termid":"GO:0110104"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0016071"}],"interesting_parent_ids":["GO:0016071","GO:0008150"],"is_obsolete":false,"name":"regulation of mRNA alternative polyadenylation","termid":"GO:0140408"}


id: SO:0001556
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant which increases the translational product level with respect to a reference sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"translational_product_level_variant","termid":"SO:0001553"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased_translational_product_level","synonyms":[{"name":"increase translational product level","type":"exact"}],"termid":"SO:0001556"}


id: GO:0038174
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with the cytokine interleukin-17A and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:jc","GOC:bf","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"interleukin-17 receptor activity","termid":"GO:0030368"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"interleukin-17A receptor activity","termid":"GO:0038174"}


id: MONDO:0011069
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cervical ribs, Sprengel anomaly, anal atresia, and urethral obstruction","secondary_identifiers":["OMIM:601389","MESH:C538072","MEDGEN:318617","UMLS:C1832391"],"synonyms":[{"name":"Frydman Cohen Ashkenazi syndrome","type":"related"},{"name":"cervical ribs, Sprengel anomaly, anal atresia, and urethral obstruction","type":"exact"},{"name":"cervical ribs, Sprengel anomaly, preaxial polydactyly, anal atresia, and urethral obstruction","type":"related"}],"termid":"MONDO:0011069","xrefs":{"Monarch":{"xref_id":"0011069"}}}


id: GO:0004518
data:
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id: PBO:0055722
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id: PBO:0071031
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id: PBO:0016891
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id: GO:0019758
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id: PR:G2TRS9
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id: PBO:0043545
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id: MONDO:0015243
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id: PBO:0070235
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id: PBO:0062949
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id: MONDO:0014060
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id: PBO:0003616
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id: MONDO:0013851
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id: PBO:0065100
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id: GO:0010570
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id: GO:0009500
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id: PBO:0064046
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id: PBO:0029634
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id: PBO:0066801
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id: MONDO:0018151
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id: GO:0042071
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a leucokinin, any of several octapeptide hormones found in insects, and transmitting the signal to initiate a change in cell activity.","definition_xrefs":["PMID:2716741","GOC:mah","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor activity","termid":"GO:0038023"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"leucokinin receptor activity","termid":"GO:0042071"}


id: MONDO:0000908
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any arrhythmogenic right ventricular cardiomyopathy in which the cause of the disease is a mutation in the CTNNA3 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial isolated arrhythmogenic right ventricular dysplasia","termid":"MONDO:0016342"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"arrhythmogenic right ventricular dysplasia 13","secondary_identifiers":["DOID:0110084","OMIM:615616","UMLS:C3810138","MEDGEN:816468"],"synonyms":[{"name":"ARVC13","type":"exact"},{"name":"ARVD13","type":"exact"},{"name":"CTNNA3 arrhythmogenic right ventricular cardiomyopathy","type":"exact"},{"name":"arrhythmogenic right ventricular cardiomyopathy 13","type":"exact"},{"name":"arrhythmogenic right ventricular cardiomyopathy caused by mutation in CTNNA3","type":"exact"},{"name":"arrhythmogenic right ventricular dysplasia type 13","type":"exact"},{"name":"arrhythmogenic right ventricular dysplasia, familial, 13","type":"exact"},{"name":"arrhythmogenic right ventricular dysplasia, familial, type 13","type":"exact"},{"name":"familial arrhythmogenic right ventricular dysplasia 13","type":"exact"}],"termid":"MONDO:0000908","xrefs":{"Monarch":{"xref_id":"0000908"}}}


id: PBO:0069092
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 339, pseudogene","termid":"PBO:0069092"}


id: FYPO:0003214
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins is normal (i.e. indistinguishable from wild type) during a cellular response to glucose starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein phosphorylation during vegetative growth","termid":"FYPO:0000776"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000257","FYPO:0001312"],"is_obsolete":false,"name":"normal protein phosphorylation during cellular response to glucose starvation","synonyms":[{"name":"normal protein phosphorylation during cellular response to glucose depletion","type":"exact"},{"name":"normal protein phosphorylation during cellular response to glucose deprivation","type":"exact"},{"name":"normal protein phosphorylation during cellular response to glucose limitation","type":"related"},{"name":"normal protein phosphorylation during cellular response to glucose starvation during mitotic cell cycle","type":"related"},{"name":"normal protein phosphorylation during cellular response to glucose starvation during vegetative growth","type":"exact"},{"name":"normal protein phosphorylation during glucose starvation","type":"exact"}],"termid":"FYPO:0003214"}


id: PBO:0068571
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 22, pseudogene","termid":"PBO:0068571"}


id: GO:0070595
data:
  {"annotated_genes":["SJAG_03057","SJAG_04236","SJAG_04666","SJAG_04184","SJAG_02916","SJAG_01028","SJAG_02278","SJAG_00610","SJAG_00424"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[71035,73784,79027,71857,73966],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070600"},{"annotations":[95307,103211,89801,92791],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0070610"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving (1->3)-alpha-D-glucans, compounds composed of glucose residues linked by (1->3)-alpha-D-glucosidic bonds.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-glucan metabolic process","termid":"GO:0030978"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00424":null,"SJAG_00610":null,"SJAG_01028":null,"SJAG_02278":null,"SJAG_02916":null,"SJAG_03057":null,"SJAG_04184":null,"SJAG_04236":null,"SJAG_04666":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"(1->3)-alpha-glucan metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"1,3-alpha-glucan metabolic process","type":"exact"},{"name":"1,3-alpha-glucan metabolism","type":"exact"},{"name":"alpha-1,3 glucan metabolic process","type":"exact"},{"name":"alpha-1,3 glucan metabolism","type":"exact"}],"termid":"GO:0070595","terms_by_termid":{"GO:0070600":null,"GO:0070610":null}}


id: PBO:0053127
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lymphocyte cytosolic protein 1","termid":"PBO:0053127"}


id: _global:started_by
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"X is strted_by Y if Y is part_of X and X and Y share a 5' boundary.","definition_xrefs":["PMID:20226267"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"started_by","termid":"_global:started_by"}


id: PBO:0005119
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PX/PXA domain protein","termid":"PBO:0005119"}


id: MONDO:0001773
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An acute or subacute inflammatory process of the central nervous system characterized histologically by multiple foci of perivascular demyelination. Symptom onset usually occurs several days after an acute viral infection or immunization, but it may coincide with the onset of infection or rarely no antecedent event can be identified. Clinical manifestations include confusion, somnolence, fever, nuchal rigidity, and involuntary movements. The illness may progress to coma and eventually be fatal. (Adams et al., Principles of Neurology, 6th ed, p921)","definition_xrefs":["MESH:D004673"],"direct_ancestors":[{"relation_name":"is_a","term_name":"encephalitis","termid":"MONDO:0019956"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"post-vaccinal encephalitis","secondary_identifiers":["ICD9:323.51","UMLS:C0751101","MEDGEN:152946","SCTID:31367003","DOID:13664"],"synonyms":[{"name":"encephalitis following immunisation procedures","type":"exact"},{"name":"encephalitis following immunization procedures","type":"exact"},{"name":"postvaccinal encephalomyelitis","type":"exact"}],"termid":"MONDO:0001773","xrefs":{"Monarch":{"xref_id":"0001773"}}}


id: PBO:0046675
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"extended synaptotagmin 1","termid":"PBO:0046675"}


id: PBO:0005136
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial DNAJ domain protein Mdj1 (predicted)","termid":"PBO:0005136"}


id: GO:0016563
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Any transcription regulator activity required for initiation or upregulation of transcription.","definition_xrefs":["GOC:jl","ISBN:0124325653"],"gene_count":0,"genotype_count":0,"name":"obsolete transcription activator activity (obsolete GO:0016563)","synonyms":[{"name":"transcription activating factor","type":"narrow"},{"name":"transcription activator activity","type":"exact"},{"name":"transcriptional activator activity","type":"exact"}],"termid":"GO:0016563"}


id: PBO:0072719
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinoid X receptor beta","termid":"PBO:0072719"}


id: GO:1902673
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Any ciliary basal body that is part of a left posteriolateral flagellum found in Giardia species (trophozoite stage).","definition_xrefs":["GOC:TermGenie","ISBN:9780124260207","PMID:5961344","PMID:16607022","GO_REF:0000064","GOC:giardia"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ciliary basal body","termid":"GO:0036064"},{"relation_name":"part_of","term_name":"left posteriolateral flagellum","termid":"GO:0097556"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0015630"}],"interesting_parent_ids":["GO:0015630","GO:0005575"],"is_obsolete":false,"name":"left posteriolateral basal body","synonyms":[{"name":"cilial basal body of left posteriolateral cilium","type":"exact"},{"name":"cilial basal body of left posteriolateral flagellum","type":"exact"},{"name":"cilial basal body of left posterolateral cilium","type":"exact"},{"name":"cilial basal body of left posterolateral flagellum","type":"exact"},{"name":"ciliary basal body of left posteriolateral cilium","type":"exact"},{"name":"ciliary basal body of left posteriolateral flagellum","type":"exact"},{"name":"ciliary basal body of left posterolateral cilium","type":"exact"},{"name":"ciliary basal body of left posterolateral flagellum","type":"exact"},{"name":"cilium basal body of left posteriolateral cilium","type":"exact"},{"name":"cilium basal body of left posteriolateral flagellum","type":"exact"},{"name":"cilium basal body of left posterolateral cilium","type":"exact"},{"name":"cilium basal body of left posterolateral flagellum","type":"exact"},{"name":"left posteriolateral flagellum ciliary basal body","type":"exact"},{"name":"microtubule basal body of left posteriolateral cilium","type":"exact"},{"name":"microtubule basal body of left posteriolateral flagellum","type":"exact"},{"name":"microtubule basal body of left posterolateral cilium","type":"exact"},{"name":"microtubule basal body of left posterolateral flagellum","type":"exact"}],"termid":"GO:1902673"}


id: PBO:0067834
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 136","termid":"PBO:0067834"}


id: GO:0039004
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the proximal tubule of the pronephric nephron acquires its identity.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"specification of pronephric tubule identity","termid":"GO:0039005"},{"relation_name":"is_a","term_name":"specification of proximal tubule identity","termid":"GO:0072082"},{"relation_name":"is_a","term_name":"proximal/distal pattern formation involved in pronephric nephron development","termid":"GO:0072196"},{"relation_name":"part_of","term_name":"pronephric proximal tubule morphogenesis","termid":"GO:0039011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"specification of pronephric proximal tubule identity","termid":"GO:0039004"}


id: PBO:0043690
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit 4I2","termid":"PBO:0043690"}


id: GO:0110008
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Shortening of the poly(A) tail of a nuclear-transcribed ncRNA.","definition_xrefs":["GOC:vw"],"gene_count":0,"genotype_count":0,"name":"obsolete ncRNA deadenylation (obsolete GO:0110008)","termid":"GO:0110008"}


id: GO:0098692
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A synapse that uses noradrenaline as a neurotransmitter.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"synapse","termid":"GO:0045202"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"noradrenergic synapse","termid":"GO:0098692"}


id: FYPO:0008159
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which histone phosphorylation at the silent mating-type locus does not occur. All histone phosphorylation may be affected, or phosphorylation of specific sites on specific histones may be abolished.","definition_xrefs":["PMID:16246721"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished histone phosphorylation during vegetative growth","termid":"FYPO:0002592"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002274","FYPO:0001320","FYPO:0002494","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abolished histone H3-S10 phosphorylation at the silent mating-type locus during vegetative growth","termid":"FYPO:0008159"}


id: MONDO:0021279
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A mucoepidermoid carcinoma that involves the submandibular gland.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"submandibular gland cancer","termid":"MONDO:0004724"},{"relation_name":"is_a","term_name":"major salivary gland mucoepidermoid carcinoma","termid":"MONDO:0006286"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"mucoepidermoid carcinoma of submandibular gland","secondary_identifiers":["NCIT:C5939","SCTID:423424005","MEDGEN:277774","UMLS:C1336524"],"synonyms":[{"name":"mucoepidermoid carcinoma of the submandibular gland","type":"exact"},{"name":"submandibular gland mucoepidermoid carcinoma","type":"exact"}],"termid":"MONDO:0021279","xrefs":{"Monarch":{"xref_id":"0021279"}}}


id: PBO:0038285
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase feature property types","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"molecular_weight","termid":"PBO:0038285"}


id: PBO:0055391
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2821","termid":"PBO:0055391"}


id: GO:0045836
data:
  {"annotated_genes":["SJAG_03438","SJAG_00266"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[108342],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010846"},{"annotations":[89424],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010845"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of meiosis.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of meiotic nuclear division","termid":"GO:0040020"},{"relation_name":"is_a","term_name":"positive regulation of meiotic cell cycle","termid":"GO:0051446"},{"relation_name":"is_a","term_name":"positive regulation of nuclear division","termid":"GO:0051785"},{"relation_name":"is_a","term_name":"positive regulation of cell cycle process","termid":"GO:0090068"},{"relation_name":"positively_regulates","term_name":"meiotic nuclear division","termid":"GO:0140013"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00266":null,"SJAG_03438":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"positively_regulates","termid":"GO:0140013"},{"rel_name":"regulates","termid":"GO:0140013"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0140013","GO:0008150"],"is_obsolete":false,"name":"positive regulation of meiotic nuclear division","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of meiosis","type":"narrow"},{"name":"positive regulation of meiosis","type":"exact"},{"name":"stimulation of meiosis","type":"narrow"},{"name":"up regulation of meiosis","type":"exact"},{"name":"up-regulation of meiosis","type":"exact"},{"name":"upregulation of meiosis","type":"exact"}],"termid":"GO:0045836","terms_by_termid":{"GO:0010845":null,"GO:0010846":null}}


id: MONDO:0004630
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"psychotic disorder","termid":"MONDO:0005485"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002039"}],"interesting_parent_ids":["MONDO:0002039"],"is_obsolete":false,"name":"substance-induced psychosis","secondary_identifiers":["MEDGEN:18746","UMLS:C0033941","DOID:8646","ICD9:293.89"],"termid":"MONDO:0004630","xrefs":{"Monarch":{"xref_id":"0004630"}}}


id: GO:1900987
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of ajmaline.","definition_xrefs":["GOC:yaf","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete ajmaline catabolic process (obsolete GO:1900987)","synonyms":[{"name":"ajmaline breakdown","type":"exact"},{"name":"ajmaline catabolism","type":"exact"},{"name":"ajmaline degradation","type":"exact"}],"termid":"GO:1900987"}


id: GO:0097098
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"An activity that facilitates the base-pairing of single-stranded RNA to double-stranded DNA resulting in the formation of R-loops.","definition_xrefs":["GOC:imk","PMID:21699496"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA/RNA hybrid binding","termid":"GO:0071667"},{"relation_name":"is_a","term_name":"annealing activity","termid":"GO:0140666"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0016853","GO:0003824"],"is_obsolete":false,"name":"DNA/RNA hybrid annealing activity","termid":"GO:0097098"}


id: PBO:0000658
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L28/L44 (predicted)","termid":"PBO:0000658"}


id: MONDO:0100542
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A precancerous condition characterized by cellular proliferation of hematopoietic cells where a substantial proportion of the cells are derived from a single hematopoietic stem cell lineage.","definition_xrefs":["NCIT:C162188","PMID:34215849"],"direct_ancestors":[{"relation_name":"is_a","term_name":"premalignant hematological system disease","termid":"MONDO:0060782"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"clonal hematopoiesis","secondary_identifiers":["MEDGEN:1694554","UMLS:C5206406"],"termid":"MONDO:0100542","xrefs":{"Monarch":{"xref_id":"0100542"}}}


id: PBO:0067511
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 652, pseudogene","termid":"PBO:0067511"}


id: PBO:0003799
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAVE complex subunit Rav2","termid":"PBO:0003799"}


id: MONDO:0003261
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A papillary meningioma that affects the cerebellum.","definition_xrefs":["NCIT:C5270"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cerebellar neoplasm","termid":"MONDO:0002913"},{"relation_name":"is_a","term_name":"papillary meningioma","termid":"MONDO:0021088"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"papillary meningioma of the cerebellum","secondary_identifiers":["MEDGEN:234109","UMLS:C1332902","DOID:5057"],"synonyms":[{"name":"cerebellar papillary meningioma","type":"related"},{"name":"cerebellum papillary meningioma","type":"exact"},{"name":"papillary meningioma of cerebellum","type":"exact"},{"name":"papillary meningioma of the cerebellum","type":"exact"}],"termid":"MONDO:0003261","xrefs":{"Monarch":{"xref_id":"0003261"}}}


id: MOD:01553
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces an N'-hydrogen atom of a histidine residue with the Applied Biosystems iTRAQ8plex-116 reporter+balance group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-histidine residue","termid":"MOD:00909"},{"relation_name":"is_a","term_name":"iTRAQ8plex-116 reporter+balance reagent acylated residue","termid":"MOD:01549"},{"relation_name":"is_a","term_name":"iTRAQ8plex reporter+balance reagent N-acylated residue","termid":"MOD:01710"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iTRAQ8plex-116 reporter+balance reagent N'-acylated histidine","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"}],"termid":"MOD:01553"}


id: GO:0140247
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a protein at a presynapse.","definition_xrefs":["PMID:27764673"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein catabolic process at synapse","termid":"GO:0140246"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030163"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0030163"],"is_obsolete":false,"name":"protein catabolic process at presynapse","termid":"GO:0140247"}


id: SO:1000087
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence_variation that causes an increase in the level of mature, spliced and processed RNA, resulting from a change in the corresponding DNA sequence.","definition_xrefs":["SO:ke"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000087 sequence_variation_increasing_level_of_transcript (obsolete SO:1000087)","synonyms":[{"name":"mutation increasing level of transcript","type":"exact"},{"name":"sequence variation increasing level of transcript","type":"exact"}],"termid":"SO:1000087"}


id: GO:0003396
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed, self-propelled movement of a neuron that contributes to the process of retrograde extension of a dendrite in a neuron of the amphid sensory organ.","definition_xrefs":["GOC:ascb_2009","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell adhesion involved in dendrite retrograde extension","termid":"GO:0003394"},{"relation_name":"part_of","term_name":"amphid sensory organ dendrite retrograde extension","termid":"GO:0003391"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"cell adhesion involved in amphid sensory organ dendrite retrograde extension","termid":"GO:0003396"}


id: SO:0001951
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A kind of histone modification site, whereby the 23rd residue (a lysine), from the start of the H3 protein is di-methylated.","definition_xrefs":["EBI:nj"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone_methylation_site","termid":"SO:0001701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"H3K23_dimethylation_site","synonyms":[{"name":"H3K23 dimethylation site","type":"exact"},{"name":"H3K23me2","type":"exact"}],"termid":"SO:0001951"}


id: PBO:0017878
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar amino acid transmembrane transporter Avt5","termid":"PBO:0017878"}


id: PBO:0057215
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 378d-2","termid":"PBO:0057215"}


id: SO:0000998
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A recursive splice site is a splice site which subdivides a large intron. Recursive splicing is a mechanism that splices large introns by sub dividing the intron at non exonic elements and alternate exons.","direct_ancestors":[{"relation_name":"is_a","term_name":"cis_splice_site","termid":"SO:0001419"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"recursive_splice_site","synonyms":[{"name":"recursive splice site","type":"exact"}],"termid":"SO:0000998"}


id: GO:0106239
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction:peregrinol diphosphate = (13R)-9,13-epoxylabd-14-ene + diphosphate.","definition_xrefs":["GOC:emb","PMID:24990389","RHEA:54512"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on phosphates","termid":"GO:0016838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"9,13-epoxylabda-14-ene synthase activity","secondary_identifiers":["EC:4.2.3.189"],"termid":"GO:0106239"}


id: MONDO:0017140
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"L1 syndrome is a mild to severe congenital X-linked developmental disorder characterized by hydrocephalus of varying degrees of severity, intellectual deficit, spasticity of the legs, and adducted thumbs. The syndrome represents a spectrum of disorders including: X-linked hydrocephalus with stenosis of the aqueduct of Sylvius (HSAS), MASA syndrome, X-linked complicated hereditary spastic paraplegia type 1, and X-linked complicated corpus callosum agenesis.","definition_xrefs":["Orphanet:275543"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L1 syndrome","secondary_identifiers":["MEDGEN:1830362","GARD:12524","UMLS:C5779710","icd11.foundation:1457804873","NORD:1343"],"synonyms":[{"name":"CRASH syndrome","type":"exact"},{"name":"L1 syndrome","type":"exact"},{"name":"L1CAM syndrome","type":"exact"},{"name":"corpus callosum hypoplasia-retardation-adducted thumbs-spasticity-hydrocephalus syndrome","type":"exact"}],"termid":"MONDO:0017140","xrefs":{"Monarch":{"xref_id":"0017140"}}}


id: PATO:0000161
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality of a single process inhering in a bearer by virtue of the bearer's occurrence per unit time.","definition_xrefs":["PATOC:melissa"],"direct_ancestors":[{"relation_name":"is_a","term_name":"physical quality of a process","termid":"PATO:0002062"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rate","termid":"PATO:0000161"}


id: GO:0014858
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of skeletal muscle cell proliferation.","definition_xrefs":["CL:0000188","GOC:ef","GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell population proliferation","termid":"GO:0008284"},{"relation_name":"is_a","term_name":"regulation of skeletal muscle cell proliferation","termid":"GO:0014857"},{"relation_name":"positively_regulates","term_name":"skeletal muscle cell proliferation","termid":"GO:0014856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of skeletal muscle cell proliferation","termid":"GO:0014858"}


id: GO:0007269
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of neurotransmitter from the presynapse into the synaptic cleft via calcium-regulated exocytosis during synaptic transmission.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neurotransmitter transport","termid":"GO:0006836"},{"relation_name":"is_a","term_name":"establishment of localization in cell","termid":"GO:0051649"},{"relation_name":"is_a","term_name":"signal release from synapse","termid":"GO:0099643"},{"relation_name":"part_of","term_name":"chemical synaptic transmission","termid":"GO:0007268"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"neurotransmitter secretion","secondary_identifiers":["GO:0010554","Reactome:R-HSA-112310"],"synonyms":[{"name":"neurotransmitter release","type":"exact"},{"name":"neurotransmitter secretory pathway","type":"exact"}],"termid":"GO:0007269"}


id: MONDO:0004640
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of the stomach resulting from alcohol ingestion.","definition_xrefs":["NCIT:C26977"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gastritis","termid":"MONDO:0004966"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"alcoholic gastritis","secondary_identifiers":["ICD9:535.3","DOID:8680","SCTID:2043009","UMLS:C0156076","ICD9:535.30","ICD10CM:K29.2","icd11.foundation:1081291109","MEDGEN:102345"],"synonyms":[{"name":"alcoholic gastritis","type":"exact"},{"name":"alcoholic gastritis, with haemorrhage","type":"exact"},{"name":"alcoholic gastritis, with hemorrhage","type":"exact"},{"name":"alcoholic gastritis, without mention of haemorrhage","type":"exact"},{"name":"alcoholic gastritis, without mention of hemorrhage","type":"exact"}],"termid":"MONDO:0004640","xrefs":{"Monarch":{"xref_id":"0004640"}}}


id: MONDO:0010184
data:
  {"annotated_genes":["SJAG_01199"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87046],"is_not":false,"summary":null,"term":"MONDO:0010184"}]},"cv_name":"mondo","definition":"A form of methylmalonic acidemia with homocystinuria, an inborn error of vitamin B12 (cobalamin) metabolism characterized by megaloblastic anemia, lethargy, failure to thrive, developmental delay, intellectual deficit and seizures. cblC type methylmalonic acidemia with homocystinuria is caused by mutations in the MMACHC gene (1p36.3) and is transmitted in an autosomal recessive manner.","definition_xrefs":["Orphanet:79282"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methylmalonic aciduria and homocystinuria","termid":"MONDO:0016826"},{"relation_name":"is_a","term_name":"hereditary peripheral neuropathy","termid":"MONDO:0020127"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01199":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002280"},{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0002280","MONDO:0004736","MONDO:0005570","MONDO:0005066","MONDO:0005244"],"is_obsolete":false,"name":"methylmalonic aciduria and homocystinuria type cblC","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NANDO:2201107","NCIT:C142174","OMIM:277400","SCTID:74653006","DOID:0050715","GARD:12128","MEDGEN:341256","UMLS:C1848561","NANDO:1201040"],"synonyms":[{"name":"MAHCC","type":"related"},{"name":"cblC","type":"related"},{"name":"cblC - cobalamin locus c","type":"related"},{"name":"cblC defect","type":"exact"},{"name":"cblC methylmalonic acidemia and homocystinuria","type":"related"},{"name":"cobalamin C defect","type":"exact"},{"name":"cobalamin C deficiency","type":"exact"},{"name":"cobalamin c disease","type":"exact"},{"name":"cobalamin locus c variant","type":"related"},{"name":"combined defect in adenosylcobalamin and methylcobalamin synthesis, type cblC","type":"exact"},{"name":"methylmalonic acidemia and homocystinuria cblC","type":"related"},{"name":"methylmalonic acidemia and homocystinuria, cblC type","type":"related"},{"name":"methylmalonic acidemia with homocystinuria type cblC","type":"related"},{"name":"methylmalonic acidemia with homocystinuria, type cblC","type":"related"},{"name":"methylmalonic aciduria and homocystinuria cblC","type":"related"},{"name":"methylmalonic aciduria and homocystinuria type cblC","type":"exact"},{"name":"methylmalonic aciduria and homocystinuria, cblC type","type":"related"},{"name":"methylmalonic aciduria and homocystinuria, cblC type, digenic","type":"related"},{"name":"methylmalonic aciduria and homocystinuria, vitamin B12-responsive","type":"related"},{"name":"methylmalonic aciduria with homocystinuria, type cblC","type":"exact"},{"name":"vitamin B12 metabolic defect with combined deficiency of methylmalonyl-Coa mutase and homocysteine:methyltetrahydrofolate methyltransferase","type":"related"}],"termid":"MONDO:0010184","terms_by_termid":{"MONDO:0010184":null},"xrefs":{"Monarch":{"xref_id":"0010184"}}}


id: FYECO:0000303
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which menadione was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ menadione","termid":"FYECO:0000303"}


id: GO:0033382
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which the protease granyme B is maintained in a secretory granule in a T cell and prevented from moving elsewhere.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maintenance of protease location in T cell secretory granule","termid":"GO:0033379"},{"relation_name":"part_of","term_name":"granzyme B localization to T cell secretory granule","termid":"GO:0033380"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"maintenance of granzyme B location in T cell secretory granule","synonyms":[{"name":"maintenance of granzyme B localization in T cell secretory granule","type":"related"},{"name":"maintenance of granzyme B localization in T lymphocyte secretory granule","type":"exact"},{"name":"maintenance of granzyme B localization in T-cell secretory granule","type":"exact"},{"name":"maintenance of granzyme B localization in T-lymphocyte secretory granule","type":"exact"}],"termid":"GO:0033382"}


id: RO:0002487
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"relation_between_structure_and_stage","termid":"RO:0002487"}


id: SO:0001318
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Epoxyqueuosine is a modified 7-deazoguanosine.","direct_ancestors":[{"relation_name":"is_a","term_name":"seven_deazaguanosine","termid":"SO:0001316"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epoxyqueuosine","secondary_identifiers":["RNAMOD:044"],"synonyms":[{"name":"eQ","type":"exact"}],"termid":"SO:0001318"}


id: MONDO:0020971
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of the urethra secondary to infection with Neisseria gonorrhoeae; this infection is spread through sexual contact.","definition_xrefs":["NCIT:C26787"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gonorrhea","termid":"MONDO:0004277"},{"relation_name":"is_a","term_name":"urethritis","termid":"MONDO:0005297"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gonococcal urethritis","secondary_identifiers":["icd11.foundation:684710834","MEDGEN:42278","SCTID:236682002","UMLS:C0018078"],"synonyms":[{"name":"Gonococcal urethritis","type":"related"},{"name":"gc urethritis","type":"exact"},{"name":"gonococcal urethritis","type":"exact"}],"termid":"MONDO:0020971","xrefs":{"Monarch":{"xref_id":"0020971"}}}


id: PBO:0086801
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; YCL001W-A gene has similarity to DOM34 and is present in a region duplicated between chromosomes XIV and III","termid":"PBO:0086801"}


id: FYECO:0000075
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which NADP+ was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ NADP+","termid":"FYECO:0000075"}


id: GO:0052740
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 1-acyl-2-lysophosphatidylserine + H2O = sn-glycerol-phosphoserine + a carboxylate.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 1-acyl-2-lysophosphatidylserine acylhydrolase activity (obsolete GO:0052740)","termid":"GO:0052740"}


id: GO:0006771
data:
  {"annotated_genes":["SJAG_02360","SJAG_00376","SJAG_04711","SJAG_01054","SJAG_00491","SJAG_02491","SJAG_04845","SJAG_00480"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[73073],"is_not":false,"summary":null,"term":"GO:0006771"},{"annotations":[79080,71669,60266,78309,117556,76811,66160],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009231"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving riboflavin (vitamin B2), the precursor for the coenzymes flavin mononucleotide (FMN) and flavin adenine dinucleotide (FAD).","definition_xrefs":["PMID:11153262","GOC:jl","PMID:24764086"],"direct_ancestors":[{"relation_name":"is_a","term_name":"water-soluble vitamin metabolic process","termid":"GO:0006767"},{"relation_name":"is_a","term_name":"flavin-containing compound metabolic process","termid":"GO:0042726"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00376":null,"SJAG_00480":null,"SJAG_00491":null,"SJAG_01054":null,"SJAG_02360":null,"SJAG_02491":null,"SJAG_04711":null,"SJAG_04845":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006766"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006766"],"is_obsolete":false,"name":"riboflavin metabolic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:Riboflavin","Reactome:R-HSA-196843"],"synonyms":[{"name":"riboflavin metabolism","type":"exact"},{"name":"vitamin B2 metabolic process","type":"exact"},{"name":"vitamin B2 metabolism","type":"exact"},{"name":"vitamin G metabolic process","type":"exact"},{"name":"vitamin G metabolism","type":"exact"}],"termid":"GO:0006771","terms_by_termid":{"GO:0006771":null,"GO:0009231":null}}


id: PBO:0083021
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Deleted ORF; does not encode a protein; included in the original annotation of Chromosome III but deleted due to sequence correction","termid":"PBO:0083021"}


id: GO:0070802
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of metula development, a process that leads to the formation of metulae. Metulae are elongated mononucleate cells that bud from the surface of the conidiophore tip.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell development","termid":"GO:0060284"},{"relation_name":"is_a","term_name":"regulation of conidiophore development","termid":"GO:0070793"},{"relation_name":"regulates","term_name":"metula development","termid":"GO:0070789"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of metula development","termid":"GO:0070802"}


id: MONDO:0016817
data:
  {"annotated_genes":["SJAG_01267","SJAG_00327","SJAG_01354","SJAG_02394","SJAG_02607","SJAG_02074","SJAG_03927"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86222],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009143"},{"annotations":[87263],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013428"},{"annotations":[87265],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013430"},{"annotations":[87264],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013431"},{"annotations":[87266],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013432"},{"annotations":[86500],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014894"},{"annotations":[85782],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0033046"}]},"cv_name":"mondo","definition":"Ear-patella-short stature syndrome is an association of malformations including bilateral microtia (severe hypoplasia of ear pinnae), absent patellae, short stature, poor weight gain, and characteristic facial features such as high forehead, micrognathism with full lips and small mouth, and accentuated nasolabial folds (smile wrinkles linking the nostrils to the labial commissure).","definition_xrefs":["Orphanet:2554"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-variable intellectual disability syndrome","termid":"MONDO:0015160"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00327":null,"SJAG_01267":null,"SJAG_01354":null,"SJAG_02074":null,"SJAG_02394":null,"SJAG_02607":null,"SJAG_03927":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"Meier-Gorlin syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:2033","DOID:0060306","MedDRA:10070612","MEDGEN:401501","NORD:1077","OMIMPS:224690","UMLS:C1868684","MESH:C538012"],"synonyms":[{"name":"Meier-Gorlin syndrome","type":"exact"},{"name":"ear-patella-short stature syndrome","type":"exact"}],"termid":"MONDO:0016817","terms_by_termid":{"MONDO:0009143":null,"MONDO:0013428":null,"MONDO:0013430":null,"MONDO:0013431":null,"MONDO:0013432":null,"MONDO:0014894":null,"MONDO:0033046":null},"xrefs":{"Monarch":{"xref_id":"0016817"}}}


id: PBO:0087798
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Syntaxin-like vacuolar t-SNARE; functions with Vam7p in vacuolar protein trafficking; mediates docking/fusion of late transport intermediates with the vacuole; has an acidic di-leucine sorting signal and C-terminal transmembrane region","termid":"PBO:0087798"}


id: PR:000050543
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A GTP-binding protein gtr1 (Schizosaccharomyces pombe) that is non-covalently bound to GTP.","definition_xrefs":["PomBase:VW","PMID:33534698","PMID:27227887","PPRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"},{"relation_name":"is_a","term_name":"GTP-binding protein gtr1 (Schizosaccharomyces pombe)","termid":"PR:000050541"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gtr1/GTP+","pombase_gene_id":"SPBC337.13c","synonyms":[{"name":"PomBase_original_PRO_term_name: GTP-binding protein gtr1, GTP-bound form (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-gtr1/GTP+","type":"exact"},{"name":"gtr1/GTP+","type":"exact"},{"name":"Gtr1/GTP+","type":"exact"}],"termid":"PR:000050543"}


id: MONDO:0017993
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare but serious cerebrovascular disorder involving thrombosis of the cerebral venous system. It affects children from the newborn period through childhood and adolescence. In childhood CSVT, acute infections of the head and neck such as mastoiditis are most common, followed by chronic underlying diseases such as nephrotic syndrome, cancer, and inflammatory bowel disease. Signs and symptoms are also age related. Seizures and altered mental status are the commonest manifestations in newborns. Headache, vomiting, and lethargy, sometimes with 6th nerve palsy, are the most common symptoms in children and adolescents.","definition_xrefs":["PMID:28798906"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cerebrovascular disorder","termid":"MONDO:0011057"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cerebral sinovenous thrombosis","secondary_identifiers":["GARD:21485","Orphanet:329217"],"synonyms":[{"name":"CSVT","type":"exact"}],"termid":"MONDO:0017993","xrefs":{"Monarch":{"xref_id":"0017993"}}}


id: GO:0050662
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binding to a coenzyme, any of various nonprotein organic cofactors that are required, in addition to an enzyme and a substrate, for an enzymatic reaction to proceed.","definition_xrefs":["ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete coenzyme binding (obsolete GO:0050662)","termid":"GO:0050662"}


id: PBO:0084378
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-ornithine transaminase (OTAse); catalyzes the second step of arginine degradation, expression is dually-regulated by allophanate induction and a specific arginine induction process; not nitrogen catabolite repression sensitive; protein abundance increases in response to DNA replication stress; human homolog OAT complements yeast null mutant","termid":"PBO:0084378"}


id: GO:0046122
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving any one of a family of organic molecules consisting of a purine base covalently bonded to a sugar deoxyribose (a deoxyribonucleoside).","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deoxyribonucleoside metabolic process","termid":"GO:0009120"},{"relation_name":"is_a","term_name":"purine nucleoside metabolic process","termid":"GO:0042278"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"purine deoxyribonucleoside metabolic process","synonyms":[{"name":"purine deoxyribonucleoside metabolism","type":"exact"}],"termid":"GO:0046122"}


id: MONDO:0006484
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplastic ductal proliferative lesion of the breast characterized by the formation of secondary lumens and prominent intraductal proliferation of a heterogeneous cellular population that may include epithelial cells, myoepithelial cells, or metaplastic apocrine cells.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"breast intraductal proliferative lesion","termid":"MONDO:0004007"},{"relation_name":"is_a","term_name":"hyperplasia","termid":"MONDO:0005043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"usual ductal breast hyperplasia","secondary_identifiers":["MEDGEN:759542","UMLS:C3532429","SCTID:472905007","ICD9:611.89","NCIT:C27941","EFO:1000612"],"synonyms":[{"name":"UDH","type":"exact"},{"name":"ductal breast hyperplasia of usual type","type":"exact"},{"name":"ordinary intraductal breast hyperplasia","type":"exact"}],"termid":"MONDO:0006484","xrefs":{"Monarch":{"xref_id":"0006484"}}}


id: GO:0097635
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the autophagosome membrane consisting of gene products and protein complexes that are loosely bound to one of its surfaces, but not integrated into the hydrophobic region.","definition_xrefs":["GOC:autophagy","GOC:mf"],"gene_count":0,"genotype_count":0,"name":"obsolete extrinsic component of autophagosome membrane (obsolete GO:0097635)","synonyms":[{"name":"autophagic vacuole peripheral membrane","type":"related"},{"name":"extrinsic component of autophagic vacuole membrane","type":"exact"},{"name":"extrinsic to autophagic vacuole membrane","type":"exact"}],"termid":"GO:0097635"}


id: MONDO:0044277
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete uric acid concentration, serum, quantitative trait locus 4 (obsolete MONDO:0044277)","secondary_identifiers":["OMIM:612671"],"synonyms":[{"name":"UAQTL4","type":"related"},{"name":"Uric acid concentration, serum, QTL4","type":"exact"},{"name":"gout susceptibility 4","type":"related"},{"name":"uric acid concentration, serum, quantitative trait locus 4","type":"related"}],"termid":"MONDO:0044277","xrefs":{"Monarch":{"xref_id":"0044277"}}}


id: GO:0010372
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of gibberellins.","definition_xrefs":["GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of gibberellin biosynthetic process","termid":"GO:0010371"},{"relation_name":"is_a","term_name":"positive regulation of isoprenoid metabolic process","termid":"GO:0045828"},{"relation_name":"is_a","term_name":"positive regulation of lipid biosynthetic process","termid":"GO:0046889"},{"relation_name":"is_a","term_name":"positive regulation of small molecule metabolic process","termid":"GO:0062013"},{"relation_name":"positively_regulates","term_name":"gibberellin biosynthetic process","termid":"GO:0009686"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150","GO:0019748","GO:0044281"],"is_obsolete":false,"name":"positive regulation of gibberellin biosynthetic process","synonyms":[{"name":"positive regulation of gibberellic acid biosynthetic process","type":"narrow"}],"termid":"GO:0010372"}


id: PBO:0001790
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dipeptidyl peptidase (predicted)","termid":"PBO:0001790"}


id: MONDO:0012316
data:
  {"annotated_genes":["SJAG_02763"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86259],"is_not":false,"summary":null,"term":"MONDO:0012316"}]},"cv_name":"mondo","definition":"Majeed syndrome is a rare genetic multisystemic disorder characterized by the triad of chronic recurrent multifocal osteomyelitis, congenital dyserythropoietic anemia, and variable transient inflammatory dermatosis.","definition_xrefs":["Orphanet:77297"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chronic recurrent multifocal osteomyelitis","termid":"MONDO:0009813"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02763":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"Majeed syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C1864997","NCIT:C119058","GARD:10088","icd11.foundation:1316564349","NANDO:2200453","OMIM:609628","SCTID:703540008","ICD9:759.89","MedDRA:10072223","MEDGEN:351273","MESH:C537839"],"synonyms":[{"name":"CDA and CRMO","type":"related"},{"name":"MAJEED syndrome","type":"related"},{"name":"MJDS","type":"related"},{"name":"Majeed syndrome","type":"exact"},{"name":"chronic recurrent multifocal osteomyelitis, congenital","type":"related"},{"name":"chronic recurrent multifocal osteomyelitis, congenital dyserythropoietic Anemia, and neutrophilic dermatosis","type":"related"},{"name":"chronic recurrent multifocal osteomyelitis-congenital dyserythropoietic anemia-neutrophilic dermatosis syndrome","type":"exact"},{"name":"congenital dyserythropoietic anaemia and chronic recurrent multifocal osteomyelitis","type":"related"},{"name":"congenital dyserythropoietic anemia and chronic recurrent multifocal osteomyelitis","type":"related"},{"name":"dyserythropoietic anemia, and neutrophilic dermatosis","type":"related"}],"termid":"MONDO:0012316","terms_by_termid":{"MONDO:0012316":null},"xrefs":{"Monarch":{"xref_id":"0012316"}}}


id: GO:0051629
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that prevents the activation of the directed movement of epinephrine into a cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inhibition of neurotransmitter uptake","termid":"GO:0051609"},{"relation_name":"is_a","term_name":"negative regulation of epinephrine uptake","termid":"GO:0051627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"inhibition of epinephrine uptake","synonyms":[{"name":"inhibition of adrenaline uptake","type":"exact"},{"name":"inhibition of epinephrine import","type":"exact"}],"termid":"GO:0051629"}


id: PBO:0086799
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; YBR220C is not an essential gene","termid":"PBO:0086799"}


id: MONDO:0019518
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Waardenburg-Shah syndrome (WSS) is a neurocristopathy characterized by the association of Waardenburg syndrome (sensorineural hearing loss and pigmentary abnormalities) and Hirschsprung disease.","definition_xrefs":["Orphanet:897"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"eye disorder","termid":"MONDO:0005328"},{"relation_name":"excluded_subClassOf","term_name":"hypopigmentation of the skin","termid":"MONDO:0019290"},{"relation_name":"is_a","term_name":"Waardenburg syndrome","termid":"MONDO:0018094"},{"relation_name":"is_a","term_name":"intestinal motility disease","termid":"MONDO:0021189"},{"relation_name":"is_a","term_name":"neurocristopathy","termid":"MONDO:0021635"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0004335"],"is_obsolete":false,"name":"Waardenburg-Shah syndrome","secondary_identifiers":["icd11.foundation:1420151003","NCIT:C124842","GARD:5524"],"synonyms":[{"name":"Hirschsprung disease with pigmentary anomaly","type":"related"},{"name":"Shah-Waardenburg syndrome","type":"exact"},{"name":"WS4","type":"exact"},{"name":"Waardenburg syndrome type 4","type":"exact"},{"name":"Waardenburg syndrome type IV","type":"exact"},{"name":"Waardenburg-Hirschsprung disease","type":"related"},{"name":"Waardenburg-Hirschsprung syndrome","type":"exact"},{"name":"Waardenburg-Shah syndrome","type":"exact"}],"termid":"MONDO:0019518","xrefs":{"Monarch":{"xref_id":"0019518"}}}


id: PBO:0061828
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OFD1 pseudogene 18 Y-linked","termid":"PBO:0061828"}


id: PBO:0012531
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-results_in_determination_of","termid":"PBO:0012531"}


id: PBO:0050011
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hexokinase 3","termid":"PBO:0050011"}


id: MONDO:0000786
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A allergy involving a Prunus domestica.","definition_xrefs":["MONDO:patterns/allergy"],"gene_count":0,"genotype_count":0,"name":"obsolete plum allergy (obsolete MONDO:0000786)","secondary_identifiers":["DOID:0060511"],"synonyms":[{"name":"Prunus domestica allergic disease","type":"exact"},{"name":"Prunus domestica caused allergic disease","type":"exact"},{"name":"Prunus domestica fruit allergy","type":"exact"},{"name":"allergy of Prunus domestica","type":"exact"}],"termid":"MONDO:0000786","xrefs":{"Monarch":{"xref_id":"0000786"}}}


id: GO:0072531
data:
  {"annotated_genes":["SJAG_02962","SJAG_03970","SJAG_03652","SJAG_04717","SJAG_00154","SJAG_04714","SJAG_04673","SJAG_00835"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104002],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990545"},{"annotations":[88449],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1905530"},{"annotations":[88793],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904082"},{"annotations":[79577],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990519"},{"annotations":[101042],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140125"},{"annotations":[90506,90507],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071934"},{"annotations":[95900],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098721"}]},"cv_name":"biological_process","definition":"The process in which a pyrimidine-containing compound is transported across a membrane. A pyrimidine-containing compound is any compound that contains pyrimidine or a formal derivative thereof.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transport","termid":"GO:0055085"},{"relation_name":"is_a","term_name":"nitrogen compound transport","termid":"GO:0071705"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00154":null,"SJAG_00835":null,"SJAG_02962":null,"SJAG_03652":null,"SJAG_03970":null,"SJAG_04673":null,"SJAG_04714":null,"SJAG_04717":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0055085","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"pyrimidine-containing compound transmembrane transport","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"pyrimidine-containing compound membrane transport","type":"exact"}],"termid":"GO:0072531","terms_by_termid":{"GO:0071934":null,"GO:0098721":null,"GO:0140125":null,"GO:1904082":null,"GO:1905530":null,"GO:1990519":null,"GO:1990545":null}}


id: PBO:0085334
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phosphatidylserine decarboxylase of the mitochondrial inner membrane; converts phosphatidylserine to phosphatidylethanolamine; regulates mitochondrial fusion and morphology; partly exposed to the mitochondrial intermembrane space; ER-localized fraction is involved in formation of lipid droplets; autocatalytically processed","termid":"PBO:0085334"}


id: PBO:0044320
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c, somatic","termid":"PBO:0044320"}


id: PBO:0055789
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lipoxygenase homology PLAT domains 1","termid":"PBO:0055789"}


id: GO:0048797
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to the swim bladder. This process pertains to the initial formation of a structure from unspecified parts. The swim bladder is used by some fishes to maintain buoyancy and may function in addition as a sound producing organ, a sound receptor, and a respiratory organ.","definition_xrefs":["GOC:mh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"animal organ formation","termid":"GO:0048645"},{"relation_name":"part_of","term_name":"swim bladder morphogenesis","termid":"GO:0048795"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"swim bladder formation","synonyms":[{"name":"gas bladder biosynthesis","type":"exact"},{"name":"gas bladder formation","type":"exact"}],"termid":"GO:0048797"}


id: PBO:0058522
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5787","termid":"PBO:0058522"}


id: PBO:0057334
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 521-1","termid":"PBO:0057334"}


id: GO:0015299
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: solute(out) + H+(in) = solute(in) + H+(out).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete solute:proton antiporter activity (obsolete GO:0015299)","synonyms":[{"name":"L-arabinose/beta-D-thiogalactopyranoside:hydrogen antiporter activity","type":"narrow"},{"name":"solute:hydrogen antiporter activity","type":"exact"}],"termid":"GO:0015299"}


id: PBO:0089024
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi localized Alpha/Beta hydrolase fold, DUF726 family protein","termid":"PBO:0089024"}


id: PR:O74477
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pca1 gene.","definition_xrefs":["UniProtKB:O74477","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metacaspase-1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1840.04","synonyms":[{"name":"Spom972h-pca1","type":"exact"}],"termid":"PR:O74477"}


id: MONDO:1010808
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Polydactyly that occurs in rock pigeon.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bird disease","termid":"MONDO:0024905"},{"relation_name":"is_a","term_name":"polydactyly, non-human animal","termid":"MONDO:1010158"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polydactyly, rock pigeon","secondary_identifiers":["OMIA:000810-8932"],"termid":"MONDO:1010808","xrefs":{"Monarch":{"xref_id":"1010808"}}}


id: GO:0009772
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A photosynthetic electron transport chain in which electrons move from the primary electron acceptor (Quinone, Q) through a chain of electron transport molecules in the thylakoid membrane until they reach the ultimate electron acceptor of Photosystem II, which is plastocyanin (PC). The electron is then passed to the P700 chlorophyll a molecules of the reaction centre of photosystem I.","definition_xrefs":["GOC:jid","ISBN:0816017360","ISBN:0716731363"],"direct_ancestors":[{"relation_name":"is_a","term_name":"photosynthetic electron transport chain","termid":"GO:0009767"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0006091","GO:0008150"],"is_obsolete":false,"name":"photosynthetic electron transport in photosystem II","termid":"GO:0009772"}


id: PBO:0036277
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nebulin-family actin filament anchoring protein Cyk3 (predicted)","termid":"PBO:0036277"}


id: PBO:0001284
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA processing protein Ebp2 (predicted)","termid":"PBO:0001284"}


id: GO:0141126
data:
  {"annotated_genes":["SJAG_00944"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73467],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003860"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a short-chain fatty acyl-CoA + H2O = a short fatty acid + CoA + H+. A short-chain fatty acid has an aliphatic tail of less than 6 carbons.","definition_xrefs":["RHEA:68180"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty acyl-CoA hydrolase activity","termid":"GO:0047617"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00944":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0016788","GO:0003674"],"is_obsolete":false,"name":"short-chain fatty acyl-CoA hydrolase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:3.1.2.18-RXN"],"termid":"GO:0141126","terms_by_termid":{"GO:0003860":null}}


id: PBO:0082945
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytoplasmic inorganic pyrophosphatase (PPase); homodimer that catalyzes the rapid exchange of oxygens from Pi with water, highly expressed and essential for viability, active-site residues show identity to those from E. coli PPase","termid":"PBO:0082945"}


id: MONDO:0004964
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Aggressive nodal or extranodal mature (peripheral) T-cell lymphomas that do not belong to the better defined entities of the remainder of mature T-cell lymphomas. This category includes the following variants: lymphoepithelioid cell variant (Lennert's lymphoma), follicular variant, and T-zone variant.","definition_xrefs":["NCIT:C4340"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphoma","termid":"MONDO:0005062"},{"relation_name":"is_a","term_name":"neoplasm of mature T-cells or NK-cells","termid":"MONDO:0005169"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"peripheral T-cell lymphoma, not otherwise specified","secondary_identifiers":["NANDO:2200028","icd11.foundation:855224800","EFO:0000211","ONCOTREE:PTCL"],"synonyms":[{"name":"PTCL","type":"related"},{"name":"peripheral T-cell lymphoma, not otherwise specified","type":"exact"}],"termid":"MONDO:0004964","xrefs":{"Monarch":{"xref_id":"0004964"}}}


id: PBO:0047368
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box and leucine rich repeat protein 21, pseudogene","termid":"PBO:0047368"}


id: PBO:0026883
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_chromatin_binding_during_cellular_response_to_nitrogen_starvation","termid":"PBO:0026883"}


id: GO:0014064
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the regulated release of serotonin.","definition_xrefs":["GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of serotonin secretion","termid":"GO:0014062"},{"relation_name":"is_a","term_name":"positive regulation of monoatomic ion transport","termid":"GO:0043270"},{"relation_name":"is_a","term_name":"positive regulation of secretion by cell","termid":"GO:1903532"},{"relation_name":"positively_regulates","term_name":"serotonin secretion","termid":"GO:0001820"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of serotonin secretion","synonyms":[{"name":"activation of serotonin secretion","type":"narrow"},{"name":"positive regulation of serotonin release","type":"related"},{"name":"stimulation of serotonin secretion","type":"narrow"},{"name":"up regulation of serotonin secretion","type":"exact"},{"name":"up-regulation of serotonin secretion","type":"exact"},{"name":"upregulation of serotonin secretion","type":"exact"}],"termid":"GO:0014064"}


id: PBO:0078951
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Arg (anticodon TCT) 3-1","termid":"PBO:0078951"}


id: PBO:0046355
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ectonucleotide pyrophosphatase/phosphodiesterase 7 pseudogene 13","termid":"PBO:0046355"}


id: MONDO:0024336
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An adenocarcinoma that arises from the vulva. Representative examples include Bartholin gland adenocarcinoma, eccrine adenocarcinoma, apocrine adenocarcinoma, and sebaceous carcinoma.","definition_xrefs":["NCIT:C6380"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vulvar glandular neoplasm","termid":"MONDO:0002198"},{"relation_name":"is_a","term_name":"adenocarcinoma","termid":"MONDO:0004970"},{"relation_name":"is_a","term_name":"vulvar carcinoma","termid":"MONDO:0005215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"vulvar adenocarcinoma","secondary_identifiers":["Orphanet:494454","DOID:2098","MEDGEN:234480","GARD:22007","UMLS:C1336975"],"synonyms":[{"name":"adenocarcinoma of the vulva","type":"exact"},{"name":"adenocarcinoma of vulva","type":"exact"},{"name":"mammalian vulva adenocarcinoma","type":"exact"},{"name":"vulva adenocarcinoma","type":"exact"},{"name":"vulvar adenocarcinoma","type":"exact"}],"termid":"MONDO:0024336","xrefs":{"Monarch":{"xref_id":"0024336"}}}


id: PBO:0051154
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 3-33-2 (pseudogene)","termid":"PBO:0051154"}


id: GO:0050219
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: prostaglandin A1 = prostaglandin C1.","definition_xrefs":["RHEA:10460"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity, transposing C=C bonds","termid":"GO:0016863"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016853"],"is_obsolete":false,"name":"prostaglandin-A1 delta-isomerase activity","secondary_identifiers":["EC:5.3.3.9","MetaCyc:PROSTAGLANDIN-A1-DELTA-ISOMERASE-RXN","KEGG_REACTION:R04565"],"synonyms":[{"name":"(13E)-(15S)-15-hydroxy-9-oxoprosta-10,13-dienoate delta10-delta11-isomerase activity","type":"related"},{"name":"prostaglandin A isomerase activity","type":"related"},{"name":"prostaglandin-A1 D-isomerase activity","type":"exact"}],"termid":"GO:0050219"}


id: PBO:0072287
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S24 pseudogene 5","termid":"PBO:0072287"}


id: PBO:0070341
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNY4 pseudogene 14","termid":"PBO:0070341"}


id: PBO:0042605
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDRT15 pseudogene 5","termid":"PBO:0042605"}


id: GO:0005179
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The action characteristic of a hormone, any substance formed in very small amounts in one specialized organ or group of cells and carried (sometimes in the bloodstream) to another organ or group of cells in the same organism, upon which it has a specific regulatory action. The term was originally applied to agents with a stimulatory physiological action in vertebrate animals (as opposed to a chalone, which has a depressant action). Usage is now extended to regulatory compounds in lower animals and plants, and to synthetic substances having comparable effects; all bind receptors and trigger some biological process.","definition_xrefs":["ISBN:0198506732","GOC:mah","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"receptor ligand activity","termid":"GO:0048018"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0098772","GO:0140677","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"hormone activity","synonyms":[{"name":"cAMP generating peptide activity","type":"narrow"},{"name":"glycopeptide hormone","type":"narrow"},{"name":"lipopeptide hormone","type":"narrow"},{"name":"peptide hormone","type":"narrow"}],"termid":"GO:0005179"}


id: PBO:0053544
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 550","termid":"PBO:0053544"}


id: GO:0140792
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: histone tyrosine phosphate + H2O = histone tyrosine + phosphate.","definition_xrefs":["PMID:19234442","PMID:19351884"],"gene_count":0,"genotype_count":0,"name":"obsolete histone tyrosine phosphatase activity (obsolete GO:0140792)","termid":"GO:0140792"}


id: GO:0052491
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process by which an organism stops, prevents, or reduces the frequency, rate or extent of the salicylic acid-mediated defense response of the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation by organism of symbiont salicylic acid-mediated defense response (obsolete GO:0052491)","synonyms":[{"name":"negative regulation by organism of symbiont salicylic acid-mediated defense response","type":"exact"},{"name":"negative regulation of symbiont SA-mediated defense response","type":"exact"},{"name":"suppression by organism of symbiont salicylic acid-mediated defense response","type":"exact"},{"name":"suppression of symbiont SA mediated defense response","type":"exact"}],"termid":"GO:0052491"}


id: MONDO:0858940
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant astrocytoma that is characterized by receptor tyrosine kinase fusions in the NTRK family, ROS1, ALK, or MET genes, that arises in the cerebral hemisphere and occurs in early childhood.","definition_xrefs":["DOID:0081278"],"direct_ancestors":[{"relation_name":"is_a","term_name":"astrocytic tumor","termid":"MONDO:0021636"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"infant-type hemispheric glioma","secondary_identifiers":["NCIT:C185471","MEDGEN:1806401","UMLS:C5669919"],"termid":"MONDO:0858940","xrefs":{"Monarch":{"xref_id":"0858940"}}}


id: PBO:0047819
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"forkhead box N4","termid":"PBO:0047819"}


id: PBO:0054082
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1432","termid":"PBO:0054082"}


id: GO:0046041
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving ITP, inosine triphosphate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine ribonucleotide metabolic process","termid":"GO:0009150"},{"relation_name":"is_a","term_name":"purine ribonucleoside triphosphate metabolic process","termid":"GO:0009205"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"ITP metabolic process","synonyms":[{"name":"ITP metabolism","type":"exact"}],"termid":"GO:0046041"}


id: GO:0002255
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A series of reactions that takes place outside the cell initiated by the action of tissue (glandular) kallikreins on low molecular weight kininogen in response to tissue damage. Tissue kallikreins are present in glandular tissues and their fluids, such as the salivary glands, sweat glands, pancreas, and kidney. The ultimate products of the tissue kallikrein-kinin cascade include kallidin and bradykinin, agents known to induce smooth muscle contraction, vasoconstriction, and increased vascular permeability.","definition_xrefs":["PMID:11842287","PMID:14501145","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinin cascade","termid":"GO:0002254"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051604"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0051604","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"tissue kallikrein-kinin cascade","synonyms":[{"name":"glandular kallikrein-kinin cascade","type":"exact"}],"termid":"GO:0002255"}


id: PBO:0069983
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1278, pseudogene","termid":"PBO:0069983"}


id: PBO:0083571
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps verified ORF NDC1/YML031W","termid":"PBO:0083571"}


id: MONDO:0020080
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete histiocytic and dendritic cell tumor (obsolete MONDO:0020080)","termid":"MONDO:0020080","xrefs":{"Monarch":{"xref_id":"0020080"}}}


id: PBO:0072134
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S15a pseudogene 11","termid":"PBO:0072134"}


id: PBO:0070065
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6atac small nuclear 22, pseudogene","termid":"PBO:0070065"}


id: MONDO:1012499
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"subclinical hypocalcemia, non-human animal","termid":"MONDO:1011720"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"subclinical hypocalcemia, cattle","secondary_identifiers":["OMIA:002048-9913"],"termid":"MONDO:1012499","xrefs":{"Monarch":{"xref_id":"1012499"}}}


id: GO:0071341
data:
  {"annotated_genes":["SJAG_01456","SJAG_01665","SJAG_01143","SJAG_00773","SJAG_05290","SJAG_04280","SJAG_03602","SJAG_00228","SJAG_01889","SJAG_04498","SJAG_00279","SJAG_03596","SJAG_02169","SJAG_03703","SJAG_02368","SJAG_00807","SJAG_03564","SJAG_04486"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[88628,89314,91079,92684,92948,94223,96680,98383,101060,101620,105547,106573,117411,118252],"is_not":false,"summary":null,"term":"GO:0071341"},{"annotations":[116381,103847,99354,98780],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0110115"}]},"cv_name":"cellular_component","definition":"A component of the cell division site that contains the mid1, cdr2, wee1, klp8, and blt1 proteins, and is involved in contractile ring localization. Medial cortical node complexes appear as cortical dots in the middle of the cell during interphase, and function to recruit other ring components in early mitosis.","definition_xrefs":["GOC:mah","GOC:vw","PMID:19959363","PMID:19474789"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"medial cortex","termid":"GO:0031097"}],"gene_count":18,"genes_by_uniquename":{"SJAG_00228":null,"SJAG_00279":null,"SJAG_00773":null,"SJAG_00807":null,"SJAG_01143":null,"SJAG_01456":null,"SJAG_01665":null,"SJAG_01889":null,"SJAG_02169":null,"SJAG_02368":null,"SJAG_03564":null,"SJAG_03596":null,"SJAG_03602":null,"SJAG_03703":null,"SJAG_04280":null,"SJAG_04486":null,"SJAG_04498":null,"SJAG_05290":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005938"}],"interesting_parent_ids":["GO:0005938","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"medial cortical node","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"mid1p medial cortical dot","type":"exact"},{"name":"midsome","type":"exact"}],"termid":"GO:0071341","terms_by_termid":{"GO:0071341":null,"GO:0110115":null}}


id: PBO:0087967
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transporter of thiamine or related compound; contributes to uptake of 5-aminoimidazole-4-carboxamide-1-beta-D-ribofuranoside (acadesine); shares sequence similarity with Thi7p","termid":"PBO:0087967"}


id: PBO:0056490
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MYC associated zinc finger protein","termid":"PBO:0056490"}


id: FYPO:0005690
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which equatorial microtubule organizing center (eMTOC) assembly is abnormal. eMTOC assembly is the aggregation, arrangement and bonding together of a set of components to form an equatorial microtubule organizing center.","definition_xrefs":["GO:1904185","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton organization during vegetative growth","termid":"FYPO:0001350"},{"relation_name":"is_a","term_name":"abnormal cellular component assembly during vegetative growth","termid":"FYPO:0001354"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000054","FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abnormal eMTOC assembly","synonyms":[{"name":"abnormal eMTOC assembly during mitotic cell cycle","type":"related"},{"name":"abnormal eMTOC assembly during vegetative growth","type":"exact"},{"name":"abnormal eMTOC formation","type":"exact"},{"name":"abnormal equatorial microtubule organizing center assembly","type":"exact"},{"name":"abnormal equatorial microtubule organizing center formation","type":"exact"}],"termid":"FYPO:0005690"}


id: GO:0033759
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a flavanone + 2-oxoglutarate + O2 = a flavone + succinate + CO2 + H2O.","definition_xrefs":["EC:1.14.20.5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-oxoglutarate-dependent dioxygenase activity","termid":"GO:0016706"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"flavone synthase activity","secondary_identifiers":["RHEA:10448","MetaCyc:RXN-8000"],"synonyms":[{"name":"FNS I","type":"related"},{"name":"flavanone,2-oxoglutarate:oxygen oxidoreductase (dehydrating) activity","type":"related"},{"name":"flavone synthase I activity","type":"related"}],"termid":"GO:0033759"}


id: PBO:0058455
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5094","termid":"PBO:0058455"}


id: MONDO:0005876
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infections with viruses of the order nidovirales. The concept includes arterivirus infections and coronaviridae infections.","definition_xrefs":["MESH:D030341"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary viral infectious disease","termid":"MONDO:0100329"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nidovirales infectious disease","secondary_identifiers":["MEDGEN:197455","UMLS:C0969753"],"synonyms":[{"name":"Nidovirales caused disease or disorder","type":"exact"},{"name":"Nidovirales disease or disorder","type":"exact"}],"termid":"MONDO:0005876","xrefs":{"Monarch":{"xref_id":"0005876"}}}


id: GO:0051559
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of phlobaphenes, red pigments with oligomeric or polymeric structure derived from the flavonoid intermediate flavan-4-ols.","definition_xrefs":["PMID:11402179"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biosynthetic process","termid":"GO:0009058"},{"relation_name":"is_a","term_name":"pigment biosynthetic process","termid":"GO:0046148"},{"relation_name":"is_a","term_name":"phlobaphene metabolic process","termid":"GO:0051558"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"phlobaphene biosynthetic process","termid":"GO:0051559"}


id: MONDO:0800099
data:
  {"annotated_genes":["SJAG_02623"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85818],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012990"}]},"cv_name":"mondo","definition":"A retinopathy, typically severe, and early onset, caused by biallelic variants in the RDH12 gene.","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited retinal dystrophy","termid":"MONDO:0019118"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02623":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"RDH12-related recessive retinopathy","references_by_uniquename":{"PB_REF:0000006":null},"synonyms":[{"name":"LCA13","type":"narrow"},{"name":"Leber congenital amaurosis 13","type":"narrow"},{"name":"Leber congenital amaurosis caused by mutation in RDH12","type":"narrow"},{"name":"Leber congenital amaurosis type 13","type":"narrow"},{"name":"RDH12 Leber congenital amaurosis","type":"narrow"},{"name":"RDH12-related recessive retinopathy","type":"exact"},{"name":"retinitis pigmentosa 53","type":"related"}],"termid":"MONDO:0800099","terms_by_termid":{"MONDO:0012990":null},"xrefs":{"Monarch":{"xref_id":"0800099"}}}


id: GO:0034866
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2,4,4-trimethylpentanoyl-CoA = 2,4,4-trimethylpent-2-enoyl-CoA + 2 H+ + 2 e-.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 2,4,4-trimethylpentanoyl-CoA dehydrogenase activity (obsolete GO:0034866)","termid":"GO:0034866"}


id: PR:O74850
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A diacylglycerol O-acyltransferase 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diacylglycerol O-acyltransferase 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1235.15","secondary_identifiers":["UniProtKB:O74850"],"synonyms":[{"name":"SPCC1235.15","type":"related"},{"name":"Spom972h-DGAT2","type":"exact"},{"name":"diglyceride acyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74850"}


id: PBO:0057198
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 371a","termid":"PBO:0057198"}


id: GO:0009462
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. A cytochrome in which the prosthetic group is a tetrapyrrolic chelate of iron in which the degree of conjugation of double bonds is less than in porphyrin. This definition would appear to include siroheme proteins (e.g. nitrite and sulfite reductases), but these are not cytochromes.","definition_xrefs":["GOC:kd","PMID:1655423"],"gene_count":0,"genotype_count":0,"name":"obsolete cytochrome d (obsolete GO:0009462)","synonyms":[{"name":"cytochrome d","type":"exact"}],"termid":"GO:0009462"}


id: PBO:0040082
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arylsulfatase D","termid":"PBO:0040082"}


id: MONDO:0002171
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign, intermediate, or malignant tumor that arises from the bone or soft tissue. It is characterized by the presence of multinucleated osteoclast-like giant cells.","definition_xrefs":["NCIT:C3055"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neoplasm","termid":"MONDO:0005070"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"giant cell tumor","secondary_identifiers":["SCTID:443790001","DOID:200","MEDGEN:6598","MESH:D005870","UMLS:C0017525"],"synonyms":[{"name":"giant cell neoplasm","type":"exact"},{"name":"giant cell tumor","type":"exact"},{"name":"giant cell tumor (morphologic abnormality)","type":"exact"},{"name":"giant cell tumor (qualifier value)","type":"exact"},{"name":"giant cell tumor NOS (morphologic abnormality)","type":"exact"},{"name":"giant cell tumors","type":"related"},{"name":"giant cell tumors (morphologic abnormality)","type":"exact"},{"name":"giant cell tumour (morphologic abnormality)","type":"exact"},{"name":"giant cell tumour (qualifier value)","type":"exact"},{"name":"giant cell tumour NOS (morphologic abnormality)","type":"exact"},{"name":"giant cell tumours","type":"related"},{"name":"giant cell tumours (morphologic abnormality)","type":"exact"},{"name":"tumor of the giant cell","type":"exact"},{"name":"tumour of the giant cell","type":"exact"}],"termid":"MONDO:0002171","xrefs":{"Monarch":{"xref_id":"0002171"}}}


id: PBO:0052357
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KIF5C antisense RNA 1","termid":"PBO:0052357"}


id: PBO:0000141
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"agmatinase (predicted)","termid":"PBO:0000141"}


id: PBO:0034158
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-results_in_ending_of","termid":"PBO:0034158"}


id: MONDO:1010120
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Sudden death in children < 19 years of age that remains unexplained after a thorough case investigation, including performance of a complete autopsy with ancillary testing, and review of the clinical history and circumstances of death.","definition_xrefs":["PMID:28679642"],"direct_ancestors":[{"relation_name":"is_a","term_name":"idiopathic disease","termid":"MONDO:0700007"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sudden unexpected death in pediatrics","synonyms":[{"name":"SUDP","type":"exact"}],"termid":"MONDO:1010120","xrefs":{"Monarch":{"xref_id":"1010120"}}}


id: PBO:0086230
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that interacts with Arp2/3 complex; interacts with Arp2/3 complex to stimulate actin filament debranching and inhibit actin nucleation; has similarity to Cof1p and also to human glia maturation factor (GMF); null mutant displays elevated mitochondrial genome loss","termid":"PBO:0086230"}


id: GO:0019988
data:
  {"annotated_genes":["SJAG_05228"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[71586],"is_not":false,"summary":null,"term":"GO:0019988"}]},"cv_name":"biological_process","definition":"The covalent alteration of an amino acid charged on a tRNA before it is incorporated into a protein, as in N-formylmethionine, selenocysteine or pyrrolysine.","definition_xrefs":["GOC:jsg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA modification","termid":"GO:0006400"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05228":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006399"}],"interesting_parent_ids":["GO:0008150","GO:0006399","GO:0010467"],"is_obsolete":false,"name":"charged-tRNA amino acid modification","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["GO:0030630"],"synonyms":[{"name":"charged tRNA amino acid modification","type":"exact"},{"name":"charged tRNA modification","type":"exact"},{"name":"charged-tRNA modification","type":"related"},{"name":"pre-translational amino acid modification","type":"exact"},{"name":"pre-translational protein modification","type":"exact"},{"name":"pretranslation protein modification","type":"exact"},{"name":"pretranslational amino acid modification","type":"exact"}],"termid":"GO:0019988","terms_by_termid":{"GO:0019988":null}}


id: MONDO:1010703
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any glycogen storage disease that occurs in cattle due to a mutation in the PYGM gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycogen storage disease, non-human animal","termid":"MONDO:1011419"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycogen storage disease, PYGM-related, cattle","secondary_identifiers":["OMIA:001139-9913"],"synonyms":[{"name":"glycogen storage disease V, cattle","type":"related"},{"name":"myophosphorylase deficiency, cattle","type":"exact"}],"termid":"MONDO:1010703","xrefs":{"Monarch":{"xref_id":"1010703"}}}


id: PR:P87324
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA polymerase delta subunit 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01667","PANTHER:PTHR10416:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA polymerase subunit delta-2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC27E2.05","secondary_identifiers":["UniProtKB:P87324"],"synonyms":[{"name":"Spom972h-POLD2","type":"exact"}],"termid":"PR:P87324"}


id: GO:0047232
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: D-galactosyl-1,4-N-acetyl-beta-D-glucosaminyl-1,3-beta-D-galactosyl-1,4-beta-D-glucosylceramide + UDP-N-acetyl-D-glucosamine = N-acetyl-D-glucosaminyl-1,6-beta-D-galactosyl-1,4-N-acetyl-beta-D-glucosaminyl-1,3-beta-D-galactosyl-1,4-beta-D-glucosyceramide + UDP.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete galactosyl-N-acetylglucosaminylgalactosylglucosyl-ceramide beta-1,6-N-acetylglucosaminyltransferase activity (obsolete GO:0047232)","synonyms":[{"name":"UDP-N-acetyl-D-glucosamine:D-galactosyl-1,4-N-acetyl-beta-D-glucosaminyl-1,3-beta-D-galactosyl-1,4-beta-D-glucosylceramide beta-1,6-N-acetylglucosaminyltransferase activity","type":"related"},{"name":"uridine diphosphoacetylglucosamine-acetyllactosaminide beta1->6-acetylglucosaminyltransferase","type":"broad"}],"termid":"GO:0047232"}


id: GO:0141074
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a virus interferes with, inhibits or disrupt a cGAS/STING signal transduction in the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:29018427","PMID:26405230","PMID:27234299"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated suppression of cytoplasmic pattern recognition receptor signaling pathway","termid":"GO:0039537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host cGAS-STING signal transduction","synonyms":[{"name":"disruption of host cGAS-STING signal transduction","type":"exact"},{"name":"disruption of host cGAS-STING signaling","type":"exact"},{"name":"suppression of host cGAS-STING","type":"exact"}],"termid":"GO:0141074"}


id: MONDO:1012511
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"generalized myoclonic epilepsy with photosensitivity, non-human animal","termid":"MONDO:1011639"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"generalized myoclonic epilepsy with photosensitivity, dog","secondary_identifiers":["OMIA:002095-9615"],"termid":"MONDO:1012511","xrefs":{"Monarch":{"xref_id":"1012511"}}}


id: MONDO:0011323
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any syndromic disease characterized by severe hypoplasia of the nose and eyes, palatal abnormalities, deficient taste and smell, inguinal hernias, hypogonadotropic hypogonadism with cryptorchidism, and normal intelligence that occurs due to variation in the SMCHD1 gene.","definition_xrefs":["OMIM:603457"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"},{"relation_name":"is_a","term_name":"congenital hypogonadotropic hypogonadism","termid":"MONDO:0015770"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arhinia, choanal atresia, and microphthalmia","secondary_identifiers":["MEDGEN:355084","Orphanet:2250","UMLS:C1863878","MESH:C537429","Orphanet:1135","SCTID:720511000"],"synonyms":[{"name":"BAMS","type":"exact"},{"name":"Bosma Arhinia Microphthalmia Syndrome","type":"exact"},{"name":"Bosma Henkin Christiansen syndrome","type":"exact"},{"name":"Bosma arhinia microphthalmia syndrome","type":"exact"},{"name":"Bosma arhinia-microphthalmia syndrome","type":"exact"},{"name":"Bosma-Henkin-Christiansen syndrome","type":"exact"},{"name":"arhinia choanal atresia microphthalmia","type":"exact"},{"name":"arrhinia-choanal atresia-microphthalmia syndrome","type":"exact"},{"name":"congenital absence of nose and anterior nasopharynx","type":"related"},{"name":"hyposmia-nasal and ocular hypoplasia-hypogonadotropic hypogonadism syndrome","type":"exact"}],"termid":"MONDO:0011323","xrefs":{"Monarch":{"xref_id":"0011323"}}}


id: MONDO:0015694
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A melanoma (disease) that involves the mucosa.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete rare skin tumor or hamartoma (obsolete MONDO:0019300)","termid":"MONDO:0019300"},{"relation_name":"is_a","term_name":"melanoma","termid":"MONDO:0005105"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"malignant melanoma of the mucosa","secondary_identifiers":["Orphanet:168999","GARD:20110","MEDGEN:1676191","UMLS:C5191057"],"synonyms":[{"name":"melanoma (disease) of mucosa","type":"exact"},{"name":"mucosa melanoma","type":"exact"},{"name":"mucosa melanoma (disease)","type":"exact"}],"termid":"MONDO:0015694","xrefs":{"Monarch":{"xref_id":"0015694"}}}


id: FYPO:0001964
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of aculeacin A than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0000003","FYPO:0001985","FYPO:0002682","FYPO:0005447"],"is_obsolete":false,"name":"resistance to aculeacin A","synonyms":[{"name":"resistance to aculeacin A during mitotic cell cycle","type":"related"},{"name":"resistance to aculeacin A during vegetative growth","type":"exact"},{"name":"resistant to aculeacin A","type":"exact"}],"termid":"FYPO:0001964"}


id: MONDO:0001412
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"conjunctival deposit","termid":"MONDO:0001331"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"conjunctival concretion","secondary_identifiers":["DOID:11988","ICD9:372.54","MEDGEN:509822","SCTID:13706005","UMLS:C0155162"],"termid":"MONDO:0001412","xrefs":{"Monarch":{"xref_id":"0001412"}}}


id: PBO:0034478
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_single-stranded_telomeric_DNA_binding","termid":"PBO:0034478"}


id: MONDO:0011622
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nephrolithiasis, uric acid, susceptibility to","secondary_identifiers":["MEDGEN:397793","OMIM:605990","UMLS:C2700426"],"synonyms":[{"name":"UAN","type":"related"},{"name":"nephrolithiasis, uric acid, susceptibility to","type":"exact"},{"name":"susceptibility to uric acid nephrolithiasis","type":"related"},{"name":"urolithiasis, uric acid, susceptibility to","type":"related"}],"termid":"MONDO:0011622","xrefs":{"Monarch":{"xref_id":"0011622"}}}


id: GO:0140083
data:
  {"annotated_genes":["SJAG_03780","SJAG_00475"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[107325,112912],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061995"}]},"cv_name":"molecular_function","definition":"Facilitating the removal of a protein or protein complex from a DNA molecule driven by ATP hydrolysis. This can be achieved for example by introducing non-canonical DNA structures or generating torque to directly inhibit a protein-DNA binding interaction.","definition_xrefs":["PMID:28552615"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ATP-dependent activity, acting on DNA","termid":"GO:0008094"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00475":null,"SJAG_03780":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0140097","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"ATP-dependent protein-DNA unloader activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"ATP-dependent protein-DNA unloading activity","type":"exact"},{"name":"protein-DNA unloading ATPase activity","type":"exact"}],"termid":"GO:0140083","terms_by_termid":{"GO:0061995":null}}


id: PBO:0064345
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plexin A3","termid":"PBO:0064345"}


id: FYPO:0008378
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which histone H2A phosphorylation occurs to a lower extent than normal during a cellular response to camptothecin. All histone H2A phosphorylation may be affected, or phosphorylation of specific sites on histone H2A may be decreased.","direct_ancestors":[{"relation_name":"is_a","term_name":"decreased histone H2A phosphorylation during vegetative growth","termid":"FYPO:0002598"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0002494","FYPO:0002274","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"decreased histone H2A phosphorylation during cellular response to camptothecin","termid":"FYPO:0008378"}


id: FYPO:0001026
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which a mitotic cell cycle arrest that normally occurs is abnormal (does not occur, or occurs abnormally).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic cell cycle process","termid":"FYPO:0002737"},{"relation_name":"is_a","term_name":"mitotic cell cycle arrest phenotype","termid":"FYPO:0004040"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000631","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abnormal occurrence of normal mitotic cell cycle arrest","termid":"FYPO:0001026"}


id: PBO:0073033
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secretin","termid":"PBO:0073033"}


id: GO:0048301
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of isotype switching to IgD isotypes.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of isotype switching","termid":"GO:0045830"},{"relation_name":"is_a","term_name":"regulation of isotype switching to IgD isotypes","termid":"GO:0048299"},{"relation_name":"positively_regulates","term_name":"isotype switching to IgD isotypes","termid":"GO:0048292"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006310"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"positively_regulates","termid":"GO:0006259"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0006310"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006310","GO:0010467","GO:0006259","GO:0008150"],"is_obsolete":false,"name":"positive regulation of isotype switching to IgD isotypes","synonyms":[{"name":"activation of isotype switching to IgD isotypes","type":"narrow"},{"name":"positive regulation of class switch recombination to IgD isotypes","type":"exact"},{"name":"positive regulation of class switching to IgD isotypes","type":"exact"},{"name":"positive regulation of isotype switch recombination to IgD isotypes","type":"exact"},{"name":"stimulation of isotype switching to IgD isotypes","type":"narrow"},{"name":"up regulation of isotype switching to IgD isotypes","type":"exact"},{"name":"up-regulation of isotype switching to IgD isotypes","type":"exact"},{"name":"upregulation of isotype switching to IgD isotypes","type":"exact"}],"termid":"GO:0048301"}


id: MONDO:0850302
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A meningioma that arises within the cranial cavity.","definition_xrefs":["DOID:0080842"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meningioma","termid":"MONDO:0016642"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intracranial meningioma","secondary_identifiers":["UMLS:C0349604","NCIT:C4656","DOID:0060106","MEDGEN:83891"],"synonyms":[{"name":"brain meningioma","type":"exact"},{"name":"brain meningioma (disease)","type":"exact"},{"name":"meningioma (disease) of brain","type":"exact"}],"termid":"MONDO:0850302","xrefs":{"Monarch":{"xref_id":"0850302"}}}


id: FYPO:0007112
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process in which depolymerization (i.e. removal of tubulin dimers) of microtubules occurs at a lower rate, or speed, as part of centromere clustering during meiotic prophase I.","definition_xrefs":["PomBase:mah","PMID:23770679"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule depolymerization","termid":"FYPO:0007111"},{"relation_name":"is_a","term_name":"decreased microtubule depolymerisation involved in meitotic centromere clustering during meiotic prophase I","termid":"FYPO:0009058"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000054"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0000054","FYPO:0005447"],"is_obsolete":false,"name":"decreased rate of microtubule depolymerization involved in meiotic centromere clustering during meiotic prophase I","synonyms":[{"name":"decreased microtubule depolymerisation speed involved in meiotic centromere clustering during meiotic prophase I","type":"exact"},{"name":"decreased microtubule depolymerization speed involved in meiotic centromere clustering during meiotic prophase I","type":"exact"},{"name":"decreased microtubule shrinkage shrinkage speed involved in meiotic centromere clustering during meiotic prophase I","type":"exact"},{"name":"decreased microtubule shrinkage speed involved in meiotic centromere clustering during meiotic prophase I","type":"exact"},{"name":"decreased rate of microtubule depolymerisation involved in meiotic centromere clustering during meiotic prophase I","type":"exact"},{"name":"decreased rate of microtubule depolymerization involved in meiotic centromere clustering during prophase I","type":"exact"},{"name":"decreased rate of microtubule depolymerization involved in meiotic chromosome clustering during meiotic prophase I","type":"related"},{"name":"decreased rate of microtubule depolymerization involved in meiotic kinetochore retrieval during meiotic prophase I","type":"related"},{"name":"reduced rate of microtubule depolymerization involved in meiotic centromere clustering during meiotic prophase I","type":"exact"}],"termid":"FYPO:0007112"}


id: PBO:0063305
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PCF11 antisense RNA 1","termid":"PBO:0063305"}


id: PR:Q9UTJ4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cgr1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UTJ4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA-processing protein cgr1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1556.05c","synonyms":[{"name":"Spom972h-cgr1","type":"exact"}],"termid":"PR:Q9UTJ4"}


id: PBO:0003320
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial distribution and morphology protein Mdm35 (predicted)","termid":"PBO:0003320"}


id: PBO:0078756
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA methyltransferase 61B","termid":"PBO:0078756"}


id: GO:0016410
data:
  {"annotated_genes":["SJAG_01619","SJAG_01826","SJAG_04631","SJAG_03537","SJAG_00097","SJAG_02842","SJAG_00102","SJAG_01204","SJAG_02990","SJAG_04791","SJAG_01877","SJAG_03288","SJAG_00695","SJAG_02296","SJAG_00676","SJAG_02773","SJAG_03961","SJAG_00469","SJAG_02165","SJAG_04131","SJAG_00246","SJAG_02309","SJAG_02726","SJAG_01899","SJAG_01592","SJAG_03112","SJAG_02085","SJAG_03900","SJAG_04535","SJAG_00519"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[74069],"is_not":false,"summary":null,"term":"GO:0016410"},{"annotations":[72735],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990883"},{"annotations":[78828,70399],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003870"},{"annotations":[74804],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004059"},{"annotations":[93129],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046941"},{"annotations":[87766,100991],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004145"},{"annotations":[71207],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004343"},{"annotations":[78513],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004379"},{"annotations":[65677],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004402"},{"annotations":[74462],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043998"},{"annotations":[91777,91120],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036408"},{"annotations":[91778],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043993"},{"annotations":[99326],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044016"},{"annotations":[72971],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032931"},{"annotations":[91779],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043992"},{"annotations":[99327,74465],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010485"},{"annotations":[88788],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043997"},{"annotations":[88789],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043995"},{"annotations":[88790],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043996"},{"annotations":[88592],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0047198"},{"annotations":[65533,72579],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004042"},{"annotations":[65530],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004358"},{"annotations":[70833,63751,117639,103389],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008080"},{"annotations":[99328],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106226"},{"annotations":[99329],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140065"},{"annotations":[99330,91780],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140064"},{"annotations":[103946,115731],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120518"},{"annotations":[74464,77727],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990189"},{"annotations":[104355],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061733"},{"annotations":[118373],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004596"},{"annotations":[89759],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008999"},{"annotations":[77728],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990190"},{"annotations":[79434,78378],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0050291"},{"annotations":[72738],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051392"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of an acyl group to a nitrogen atom on the acceptor molecule.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl 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id: PBO:0039938
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AT-rich interaction domain 1B","termid":"PBO:0039938"}


id: PBO:0076851
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed metallothionein like protein","termid":"PBO:0076851"}


id: MONDO:0025066
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An acute generalized dermatitis of pigs which occurs from 5 to 35 days of age, characterized by sudden onset, with morbidity of 10 to 90% and mortality of 5 to 90%. The lesions are caused by Staphylococcus hyos but the bacterial agent is unable to penetrate the intact skin. Abrasions on the feet and legs or lacerations on the body frequently precede infection. In acute cases, a vesicular-type virus may be the predisposing factor. The causative organism is inhibited by most antibiotics. (Merck Veterinary Manual, 5th ed)","definition_xrefs":["MESH:D004818"],"direct_ancestors":[{"relation_name":"is_a","term_name":"swine disease","termid":"MONDO:0024990"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epidermitis, exudative, of swine","synonyms":[{"name":"Epidermitis, exudative of swine","type":"related"},{"name":"disease, greasy pig","type":"related"},{"name":"exudative dermatitis of swine","type":"related"},{"name":"greasy pig disease","type":"related"},{"name":"swine exudative Dermatitides","type":"related"},{"name":"swine exudative dermatitis","type":"related"}],"termid":"MONDO:0025066","xrefs":{"Monarch":{"xref_id":"0025066"}}}


id: PR:Q9Y794
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An origin recognition complex subunit 4 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR12087:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"origin recognition complex subunit 4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP23A10.13","secondary_identifiers":["UniProtKB:Q9Y794"],"synonyms":[{"name":"SPBP23A10.13","type":"related"},{"name":"Spom972h-ORC4","type":"exact"},{"name":"orp4","type":"related"}],"termid":"PR:Q9Y794"}


id: MONDO:1012375
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"follicular dysplasia and interface dermatitis, non-human animal","termid":"MONDO:1011750"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"follicular dysplasia and interface dermatitis, dog","secondary_identifiers":["OMIA:001369-9615"],"termid":"MONDO:1012375","xrefs":{"Monarch":{"xref_id":"1012375"}}}


id: PBO:0087622
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the core form of RNA polymerase transcription factor TFIIH; has both protein kinase and DNA-dependent ATPase/helicase activities; essential for transcription and nucleotide excision repair; interacts with Tfb4p","termid":"PBO:0087622"}


id: MONDO:0004207
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An aggressive malignant smooth muscle neoplasm, arising from the pulmonary artery It is characterized by a proliferation of neoplastic spindle cells.","definition_xrefs":["NCIT:C5373"],"direct_ancestors":[{"relation_name":"is_a","term_name":"arterial disorder","termid":"MONDO:0000473"},{"relation_name":"is_a","term_name":"leiomyosarcoma","termid":"MONDO:0005058"},{"relation_name":"is_a","term_name":"angiosarcoma","termid":"MONDO:0016982"},{"relation_name":"is_a","term_name":"great vessel cancer","termid":"MONDO:0040676"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"pulmonary artery leiomyosarcoma","secondary_identifiers":["UMLS:C1335572","DOID:7389","MEDGEN:233372"],"synonyms":[{"name":"leiomyosarcoma of pulmonary artery","type":"exact"},{"name":"leiomyosarcoma of the pulmonary artery","type":"exact"},{"name":"pulmonary artery leiomyosarcoma","type":"exact"}],"termid":"MONDO:0004207","xrefs":{"Monarch":{"xref_id":"0004207"}}}


id: GO:0062246
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The volume enclosed by an exocytic vesicle.","definition_xrefs":["PMID:27384577"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transport vesicle lumen","termid":"GO:0098566"},{"relation_name":"part_of","term_name":"exocytic vesicle","termid":"GO:0070382"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0031410","GO:0005575"],"is_obsolete":false,"name":"exocytic vesicle lumen","termid":"GO:0062246"}


id: GO:1990076
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any cell wall polysaccharide catabolic process that is involved in abscission.","definition_xrefs":["PMID:23479623","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell wall polysaccharide catabolic process","termid":"GO:0044347"},{"relation_name":"part_of","term_name":"abscission","termid":"GO:0009838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0071554"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0071554","GO:0008150","GO:0005975"],"is_obsolete":false,"name":"cell wall polysaccharide catabolic process involved in abscission","termid":"GO:1990076"}


id: GO:0061906
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which an autophagosome is transported to, and/or maintained in, a specific location within the cell.","definition_xrefs":["PMID:26763909"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vacuolar localization","termid":"GO:1990849"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"autophagosome localization","termid":"GO:0061906"}


id: PBO:0045839
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 alpha 1 pseudogene 29","termid":"PBO:0045839"}


id: MONDO:0000623
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete organ system benign neoplasm (obsolete MONDO:0000623)","termid":"MONDO:0000623","xrefs":{"Monarch":{"xref_id":"0000623"}}}


id: GO:0034171
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of toll-like receptor 11 signaling pathway.","definition_xrefs":["GOC:add","PMID:16551253","PMID:17328678"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytoplasmic pattern recognition receptor signaling pathway","termid":"GO:0039531"},{"relation_name":"regulates","term_name":"toll-like receptor 11 signaling pathway","termid":"GO:0034170"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of toll-like receptor 11 signaling pathway","synonyms":[{"name":"regulation of TLR11 signaling pathway","type":"exact"},{"name":"regulation of toll-like receptor 11 signalling pathway","type":"exact"}],"termid":"GO:0034171"}


id: SO:0000685
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"DNA region representing open chromatin structure that is hypersensitive to digestion by DNase I.","direct_ancestors":[{"relation_name":"is_a","term_name":"nuclease_hypersensitive_site","termid":"SO:0000322"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNaseI_hypersensitive_site","synonyms":[{"name":"DHS","type":"exact"},{"name":"DNaseI hypersensitive site","type":"exact"},{"name":"INSDC_feature:regulatory","type":"broad"},{"name":"INSDC_qualifier:DNase_I_hypersensitive_site","type":"exact"}],"termid":"SO:0000685"}


id: PBO:0069181
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 435, pseudogene","termid":"PBO:0069181"}


id: GO:0090284
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that increases the rate, frequency, or extent of the addition of a carbohydrate or carbohydrate derivative unit to a protein amino acid in any compartment of the Golgi apparatus.","definition_xrefs":["GOC:tb","GOC:pr"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of protein glycosylation in Golgi (obsolete GO:0090284)","synonyms":[{"name":"positive regulation of protein amino acid glycosylation in Golgi","type":"exact"}],"termid":"GO:0090284"}


id: GO:0097582
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein dimer complex that possesses dolichyl-phosphate-mannose-protein mannosyltransferase activity and, in S. cerevisiae, is composed of Pmt1p-Pmt2p.","definition_xrefs":["GOC:jd","PMID:12551906"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dolichyl-phosphate-mannose-protein mannosyltransferase complex","termid":"GO:0031502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005789"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005783"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0005783","GO:0005789","GO:0032991"],"is_obsolete":false,"name":"dolichyl-phosphate-mannose-protein mannosyltransferase Pmt1p-Pmt2p dimer complex","synonyms":[{"name":"Pmt1p-Pmt2p complex","type":"narrow"}],"termid":"GO:0097582"}


id: MONDO:1011951
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"musculoskeletal system disorder, non-human animal","termid":"MONDO:1011335"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"osteodystrophy, non-human animal","secondary_identifiers":["OMIA:000753"],"termid":"MONDO:1011951","xrefs":{"Monarch":{"xref_id":"1011951"}}}


id: PBO:0078130
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha variable 12-1","termid":"PBO:0078130"}


id: GO:0090336
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency, or extent of brown fat cell differentiation. Brown fat cell differentiation is the process in which a relatively unspecialized cell acquires specialized features of a brown adipocyte, an animal connective tissue cell involved in adaptive thermogenesis. Brown adipocytes contain multiple small droplets of triglycerides and a high number of mitochondria.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of fat cell differentiation","termid":"GO:0045600"},{"relation_name":"is_a","term_name":"regulation of brown fat cell differentiation","termid":"GO:0090335"},{"relation_name":"positively_regulates","term_name":"brown fat cell differentiation","termid":"GO:0050873"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of brown fat cell differentiation","termid":"GO:0090336"}


id: GO:1901660
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of calcium ion out of a cell or organelle.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calcium ion transport","termid":"GO:0006816"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"calcium ion export","termid":"GO:1901660"}


id: PBO:0079829
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBAP1-MVB12-associated (UMA) domain containing 1","termid":"PBO:0079829"}


id: FYPO:0003675
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of the large form of 5.8S rRNA measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah","PMID:8887563"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered rRNA or precursor level","termid":"FYPO:0005996"},{"relation_name":"is_a","term_name":"increased ncRNA level during vegetative growth","termid":"FYPO:0008146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0006551","FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"increased mature 5.8SL rRNA level","synonyms":[{"name":"increased 5.8SL rRNA level","type":"broad"},{"name":"increased mature 5.8S (L) rRNA level","type":"exact"},{"name":"increased mature 5.8SL rRNA accumulation","type":"related"},{"name":"increased mature 5.8SL rRNA level during mitotic cell cycle","type":"related"},{"name":"increased mature 5.8SL rRNA level during vegetative growth","type":"exact"},{"name":"increased mature 5.8SL rRNA transcript level","type":"exact"}],"termid":"FYPO:0003675"}


id: PBO:0076732
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"t-complex 1 pseudogene 1","termid":"PBO:0076732"}


id: GO:0000184
data:
  {"annotated_genes":["SJAG_04118","SJAG_03179","SJAG_03276","SJAG_04321","SJAG_00854","SJAG_01830","SJAG_04056","SJAG_01252","SJAG_05276","SJAG_03886","SJAG_04084","SJAG_01521","SJAG_04824","SJAG_01720","SJAG_03223","SJAG_04153","SJAG_01818","SJAG_04818","SJAG_00507","SJAG_05014","SJAG_04360","SJAG_04006","SJAG_01218","SJAG_03805","SJAG_00226"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[70322,73740,90265,90673,105126,106264,113962,115760],"is_not":false,"summary":null,"term":"GO:0000184"},{"annotations":[93443,109206,90162,116530,89116,118688,75814,101598,91886,105634,107829,102445,97603,106842,116268,96278,104767],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070478"}]},"cv_name":"biological_process","definition":"The nonsense-mediated decay pathway for nuclear-transcribed mRNAs degrades mRNAs in which an amino-acid codon has changed to a nonsense codon; this prevents the translation of such mRNAs into truncated, and potentially harmful, proteins.","definition_xrefs":["GOC:krc","GOC:ma","PMID:10025395"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear-transcribed mRNA catabolic process","termid":"GO:0000956"}],"gene_count":25,"genes_by_uniquename":{"SJAG_00226":null,"SJAG_00507":null,"SJAG_00854":null,"SJAG_01218":null,"SJAG_01252":null,"SJAG_01521":null,"SJAG_01720":null,"SJAG_01818":null,"SJAG_01830":null,"SJAG_03179":null,"SJAG_03223":null,"SJAG_03276":null,"SJAG_03805":null,"SJAG_03886":null,"SJAG_04006":null,"SJAG_04056":null,"SJAG_04084":null,"SJAG_04118":null,"SJAG_04153":null,"SJAG_04321":null,"SJAG_04360":null,"SJAG_04818":null,"SJAG_04824":null,"SJAG_05014":null,"SJAG_05276":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0016071"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0016071","GO:0010467"],"is_obsolete":false,"name":"nuclear-transcribed mRNA catabolic process, nonsense-mediated decay","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:Nonsense-mediated_decay","Reactome:R-HSA-927802","Wikipedia:Nonsense-mediated_mRNA_decay"],"synonyms":[{"name":"mRNA breakdown, nonsense-mediated decay","type":"exact"},{"name":"mRNA catabolic process, nonsense-mediated","type":"exact"},{"name":"mRNA catabolism, nonsense-mediated","type":"exact"},{"name":"mRNA degradation, nonsense-mediated decay","type":"exact"},{"name":"nonsense-mediated mRNA decay","type":"exact"},{"name":"nuclear mRNA catabolic process, nonsense-mediated decay","type":"exact"}],"termid":"GO:0000184","terms_by_termid":{"GO:0000184":null,"GO:0070478":null}}


id: GO:0072668
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A cellular process that results in the biosynthesis of constituent macromolecules, assembly, and arrangement of constituent parts of a tubulin complex. Includes the synthesis and folding of the constituent protein molecules, and those protein modifications that are involved in synthesis or assembly of the complex. A tubulin complex is a heterodimer of tubulins alpha and beta, from which microtubules are assembled.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete tubulin complex biogenesis (obsolete GO:0072668)","synonyms":[{"name":"tubulin complex biogenesis","type":"exact"}],"termid":"GO:0072668"}


id: GO:0001986
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the force with which the cardiac muscles of the heart pump blood through the circulatory system as a result of the baroreceptor response to increased blood pressure.","definition_xrefs":["ISBN:0721643949","GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of heart contraction","termid":"GO:0045822"},{"relation_name":"part_of","term_name":"baroreceptor response to increased systemic arterial blood pressure","termid":"GO:0001983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of the force of heart contraction involved in baroreceptor response to increased systemic arterial blood pressure","synonyms":[{"name":"decreased force of heart contraction during baroreceptor response to increased systemic arterial blood pressure","type":"exact"},{"name":"decreased strength of cardiac contraction during baroreceptor response to increased blood pressure","type":"exact"}],"termid":"GO:0001986"}


id: MONDO:0014268
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Combined immunodeficiency due to OX40 deficiency is a rare combined T and B cell immunodeficiency characterized by susceptibility to develop an aggressive, childhood-onset, disseminated, cutaneous and systemic Kaposi sarcoma.","definition_xrefs":["Orphanet:431149"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"hereditary neoplastic syndrome","termid":"MONDO:0015356"},{"relation_name":"excluded_subClassOf","term_name":"non-SCID combined immunodeficiency","termid":"MONDO:0018814"},{"relation_name":"is_a","term_name":"combined immunodeficiency","termid":"MONDO:0015131"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"combined immunodeficiency due to OX40 deficiency","secondary_identifiers":["DOID:0111935","GARD:17710","MEDGEN:816383","OMIM:615593","SCTID:766879006","UMLS:C3810053"],"synonyms":[{"name":"IMD16","type":"related"},{"name":"OX40 deficiency","type":"related"},{"name":"combined immunodeficiency with childhood-onset Kaposi sarcoma","type":"exact"},{"name":"combined immunodeficiency with impaired immunity to HHV-8","type":"exact"},{"name":"combined immunodeficiency with impaired immunity to human herpes virus 8","type":"exact"},{"name":"immunodeficiency 16","type":"related"},{"name":"immunodeficiency type 16","type":"exact"}],"termid":"MONDO:0014268","xrefs":{"Monarch":{"xref_id":"0014268"}}}


id: MONDO:0006427
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A melanoma characterized by the presence of malignant spindle-shaped melanocytes.","definition_xrefs":["NCIT:C4237"],"direct_ancestors":[{"relation_name":"is_a","term_name":"melanoma","termid":"MONDO:0005105"},{"relation_name":"is_a","term_name":"spindle cell neoplasm","termid":"MONDO:0020664"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spindle cell melanoma","secondary_identifiers":["DOID:3162","UMLS:C0334444","EFO:1000546","ICDO:8772/3","SCTID:403923002","MEDGEN:83147"],"synonyms":[{"name":"desmoplastic melanoma","type":"related"},{"name":"malignant spindle cell melanoma","type":"exact"},{"name":"spindle cell malignant melanoma","type":"exact"},{"name":"spindle cell melanoma","type":"exact"},{"name":"spitzoid malignant melanoma","type":"exact"}],"termid":"MONDO:0006427","xrefs":{"Monarch":{"xref_id":"0006427"}}}


id: MONDO:0019562
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Localized scleroderma is the skin localized form of scleroderma characterized by fibrosis of the skin causing cutaneous plaques or strips.","definition_xrefs":["Orphanet:90289"],"direct_ancestors":[{"relation_name":"is_a","term_name":"scleroderma","termid":"MONDO:0019340"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"localized scleroderma","secondary_identifiers":["DOID:8472","MESH:D012594","ICD9:701.0","MEDGEN:48586","GARD:7058","NCIT:C72069","SCTID:201048007","icd11.foundation:1430740369","UMLS:C0036420","EFO:1001361","MedDRA:10039712"],"synonyms":[{"name":"Scleroderma, circumscribed or localised","type":"exact"},{"name":"Scleroderma, circumscribed or localized","type":"exact"},{"name":"Scleroderma, localised","type":"related"},{"name":"Scleroderma, localized","type":"related"},{"name":"circumscribed scleroderma","type":"exact"},{"name":"localised fibrosing scleroderma","type":"exact"},{"name":"localised morphea","type":"exact"},{"name":"localised morphoea","type":"exact"},{"name":"localised scleroderma (disorder) [ambiguous]","type":"exact"},{"name":"localized fibrosing scleroderma","type":"exact"},{"name":"localized morphea","type":"exact"},{"name":"localized morphoea","type":"exact"},{"name":"localized scleroderma","type":"exact"},{"name":"localized scleroderma (disorder) [ambiguous]","type":"exact"},{"name":"morphea","type":"exact"}],"termid":"MONDO:0019562","xrefs":{"Monarch":{"xref_id":"0019562"}}}


id: PBO:0054291
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1682","termid":"PBO:0054291"}


id: GO:1901365
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of funalenone.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenol-containing compound catabolic process","termid":"GO:0019336"},{"relation_name":"is_a","term_name":"ketone catabolic process","termid":"GO:0042182"},{"relation_name":"is_a","term_name":"olefinic compound catabolic process","termid":"GO:0120256"},{"relation_name":"is_a","term_name":"funalenone metabolic process","termid":"GO:1901364"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"funalenone catabolic process","synonyms":[{"name":"funalenone catabolism","type":"exact"},{"name":"funalenone degradation","type":"exact"},{"name":"funalenone breakdown","type":"exact"}],"termid":"GO:1901365"}


id: PBO:0074402
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small integral membrane protein 10 like 1","termid":"PBO:0074402"}


id: PBO:0045640
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox 4 like 52 (pseudogene)","termid":"PBO:0045640"}


id: PBO:0039710
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"APOA1 antisense RNA","termid":"PBO:0039710"}


id: GO:0045162
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which voltage-gated sodium channels become localized together in high densities. In animals, nodes of Ranvier differ dramatically from internodal axonal regions in very high densities of voltage-dependent sodium (Nav) channels responsible for the rapid, inward ionic currents that produce membrane depolarization.","definition_xrefs":["PMID:11456440"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuronal ion channel clustering","termid":"GO:0045161"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0061024","GO:0008150"],"is_obsolete":false,"name":"clustering of voltage-gated sodium channels","synonyms":[{"name":"Nav channel clustering","type":"exact"},{"name":"clustering of voltage gated sodium channels","type":"exact"},{"name":"clustering of voltage-dependent sodium channels","type":"exact"},{"name":"voltage-gated sodium channel clustering","type":"exact"}],"termid":"GO:0045162"}


id: PATO:0000126
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000126 absolute mass (obsolete PATO:0000126)","termid":"PATO:0000126"}


id: GO:0001945
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a lymph vessel over time, from its formation to the mature structure.","definition_xrefs":["GOC:dph","UBERON:0001473"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"vasculature development","termid":"GO:0001944"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lymph vessel development","termid":"GO:0001945"}


id: PBO:0082285
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Aquaglyceroporin, plasma membrane channel; involved in efflux of glycerol and xylitol, and in transport of acetate, arsenite, and antimonite; key factor in maintaining redox balance by mediating passive diffusion of glycerol; phosphorylated by Hog1p and Slt2p MAPK; deletion improves xylose fermentation; regulated by Rgc1p and Ask10p, which are regulated by Hog1p phosphorylation under osmotic stress; phosphorylation by Ypk1p required to maintain an open state","termid":"PBO:0082285"}


id: PBO:0075620
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sprouty related EVH1 domain containing 1","termid":"PBO:0075620"}


id: GO:0018472
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 1-hydroxy-2-naphthaldehyde + NAD+ + H2O = NADH + H+ + 1-hydroxy-2-naphthoate.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 1-hydroxy-2-naphthaldehyde dehydrogenase activity (obsolete GO:0018472)","termid":"GO:0018472"}


id: PBO:0117149
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TXNRD1 antisense RNA 1","termid":"PBO:0117149"}


id: MONDO:0003385
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete cervical clear cell adenocarcinoma (obsolete MONDO:0003385)","termid":"MONDO:0003385","xrefs":{"Monarch":{"xref_id":"0003385"}}}


id: PBO:0075328
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spermatogenesis and oogenesis specific basic helix-loop-helix 1","termid":"PBO:0075328"}


id: PBO:0064911
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 4 regulatory subunit 2","termid":"PBO:0064911"}


id: GO:1903699
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a tarsal gland over time, from its formation to the mature structure.","definition_xrefs":["GO_REF:0000094","GOC:TermGenie","PMID:20664693"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sebaceous gland development","termid":"GO:0048733"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tarsal gland development","synonyms":[{"name":"Meibomian gland development","type":"exact"},{"name":"gland of Meibom development","type":"exact"},{"name":"glandula tarsales development","type":"exact"},{"name":"tarsoconjunctival gland development","type":"related"}],"termid":"GO:1903699"}


id: GO:0004611
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: phosphate + oxaloacetate = phosphoenolpyruvate + CO2 + other reaction products.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"phosphoenolpyruvate carboxykinase activity","synonyms":[{"name":"PEP carboxykinase activity","type":"related"},{"name":"PEPCK activity","type":"related"},{"name":"phosphopyruvate carboxylase activity","type":"related"}],"termid":"GO:0004611"}


id: PBO:0005492
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.4.1.4","termid":"PBO:0005492"}


id: FYPO:0007257
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the meiotic spindle pole body begins later than normal during the first meiotic nuclear division.","definition_xrefs":["PomBase:mah","PMID:29259000"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to meiotic spindle pole body","termid":"FYPO:0002772"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000054","FYPO:0001985","FYPO:0000631","FYPO:0000002","FYPO:0005447","FYPO:0000138"],"is_obsolete":false,"name":"delayed onset of protein localization to meiotic spindle pole body during meiosis I","synonyms":[{"name":"delayed onset of protein localisation to meiotic spindle pole body during meiosis I","type":"exact"},{"name":"delayed onset of protein localization to meiotic SPB during meiosis I","type":"exact"},{"name":"delayed onset of protein localization to meiotic spindle pole body during first meiotic nuclear division","type":"exact"},{"name":"delayed onset of protein localization to spindle pole body during meiosis I","type":"exact"},{"name":"delayed protein localization to meiotic spindle pole body during meiosis II","type":"exact"}],"termid":"FYPO:0007257"}


id: MONDO:0015697
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inborn error of immunity","termid":"MONDO:0003778"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"immunoglobulin heavy chain deficiency","secondary_identifiers":["GARD:20111","icd11.foundation:960006636","MEDGEN:98309","SCTID:234539005","UMLS:C0398692","ICD9:279.03","Orphanet:169110"],"termid":"MONDO:0015697","xrefs":{"Monarch":{"xref_id":"0015697"}}}


id: PBO:0065132
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"parkin RBR E3 ubiquitin protein ligase","termid":"PBO:0065132"}


id: MONDO:0018797
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete genetic cardiac malformation (obsolete MONDO:0018797)","secondary_identifiers":["Orphanet:477805"],"termid":"MONDO:0018797","xrefs":{"Monarch":{"xref_id":"0018797"}}}


id: MONDO:0035362
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any inflammatory bowel disease in which the cause of the disease is a mutation in the TRIM22 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene","PMID:26836588"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inflammatory bowel disease","termid":"MONDO:0005265"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0004335"],"is_obsolete":false,"name":"TRIM22-related inflammatory bowel disease","secondary_identifiers":["Orphanet:597201","GARD:22395","MEDGEN:1842464","UMLS:C5680271"],"synonyms":[{"name":"TRIM22-related IBD","type":"exact"}],"termid":"MONDO:0035362","xrefs":{"Monarch":{"xref_id":"0035362"}}}


id: PBO:0066869
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 169","termid":"PBO:0066869"}


id: GO:0052325
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of pectin, a polymer containing a backbone of alpha-1,4-linked D-galacturonic acid residues, as part of the organization and biogenesis of the cell wall.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pectin biosynthetic process","termid":"GO:0045489"},{"relation_name":"is_a","term_name":"cell wall pectin metabolic process","termid":"GO:0052546"},{"relation_name":"is_a","term_name":"cell wall polysaccharide biosynthetic process","termid":"GO:0070592"},{"relation_name":"part_of","term_name":"plant-type cell wall biogenesis","termid":"GO:0009832"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"part_of","termid":"GO:0071554"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0005975","GO:0071554","GO:0008150"],"is_obsolete":false,"name":"cell wall pectin biosynthetic process","synonyms":[{"name":"cell wall pectin biosynthesis","type":"exact"},{"name":"pectin biosynthesis during cell wall organization and biogenesis","type":"related"}],"termid":"GO:0052325"}


id: PR:Q10084
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mfs2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10084"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized transporter mfs2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC11D3.05","synonyms":[{"name":"Spom972h-mfs2","type":"exact"}],"termid":"PR:Q10084"}


id: PBO:0066751
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 49","termid":"PBO:0066751"}


id: PBO:0067922
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 224","termid":"PBO:0067922"}


id: GO:0018960
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving 4-nitrophenol, a nitroaromatic compound which is used in the production of dyes, leather treatment agents, fungicides and as an intermediate in the production of the insecticide parathion.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenol-containing compound metabolic process","termid":"GO:0018958"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"4-nitrophenol metabolic process","secondary_identifiers":["UM-BBD_pathwayID:nphe"],"synonyms":[{"name":"4-nitrophenol metabolism","type":"exact"},{"name":"p-nitrophenol metabolic process","type":"exact"},{"name":"p-nitrophenol metabolism","type":"exact"}],"termid":"GO:0018960"}


id: FYPO:0004786
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the Golgi apparatus is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to Golgi apparatus","termid":"FYPO:0003936"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000138","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"decreased protein localization to Golgi apparatus","synonyms":[{"name":"decreased protein localisation to Golgi apparatus","type":"exact"},{"name":"decreased protein localization to Golgi apparatus during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to Golgi apparatus during vegetative growth","type":"exact"},{"name":"reduced protein localization to Golgi apparatus","type":"exact"}],"termid":"FYPO:0004786"}


id: GO:0045821
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of glycolysis.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of glycolytic process","termid":"GO:0006110"},{"relation_name":"is_a","term_name":"positive regulation of purine nucleotide catabolic process","termid":"GO:0033123"},{"relation_name":"is_a","term_name":"positive regulation of carbohydrate metabolic process","termid":"GO:0045913"},{"relation_name":"is_a","term_name":"positive regulation of ATP metabolic process","termid":"GO:1903580"},{"relation_name":"positively_regulates","term_name":"glycolytic process","termid":"GO:0006096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006091"},{"rel_name":"positively_regulates","termid":"GO:0005975"},{"rel_name":"positively_regulates","termid":"GO:0006091"},{"rel_name":"regulates","termid":"GO:0055086"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0005975","GO:0055086","GO:0044281","GO:0008150","GO:0006091"],"is_obsolete":false,"name":"positive regulation of glycolytic process","synonyms":[{"name":"activation of glycolysis","type":"narrow"},{"name":"stimulation of glycolysis","type":"narrow"},{"name":"up regulation of glycolysis","type":"exact"},{"name":"up-regulation of glycolysis","type":"exact"},{"name":"upregulation of glycolysis","type":"exact"}],"termid":"GO:0045821"}


id: PBO:0026756
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_hexavalent_chromium","termid":"PBO:0026756"}


id: PBO:0041201
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BUD31 homolog pseudogene 1","termid":"PBO:0041201"}


id: MONDO:0000730
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete pontocerebellar hypoplasia (obsolete MONDO:0000730)","termid":"MONDO:0000730","xrefs":{"Monarch":{"xref_id":"0000730"}}}


id: MONDO:0700037
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare testicular sex cord-stromal neoplasm characterized by mixed features of both fibroma and thecoma.","definition_xrefs":["PMID:23715159","PMID:33102067"],"direct_ancestors":[{"relation_name":"is_a","term_name":"testicular sex cord-stromal neoplasm","termid":"MONDO:0003125"},{"relation_name":"is_a","term_name":"fibrothecoma","termid":"MONDO:0700036"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testicular fibrothecoma","termid":"MONDO:0700037","xrefs":{"Monarch":{"xref_id":"0700037"}}}


id: PBO:0066894
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 194","termid":"PBO:0066894"}


id: GO:0103050
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: isobutanol + NADP = isobutyraldehyde + NADPH + H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete isobutyraldehyde reductase activity (obsolete GO:0103050)","termid":"GO:0103050"}


id: PBO:0081540
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF451 regulatory antisense RNA 1","termid":"PBO:0081540"}


id: GO:0102373
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: beta-amyrin + 3 O2 + 3 reduced [NADPH--hemoprotein reductase] = 4 H+ + 4 H2O + oleanolate + 3 oxidized [NADPH--hemoprotein reductase].","definition_xrefs":["RHEA:43068","PMID:22039103"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen","termid":"GO:0016712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"beta-amyrin 28-monooxygenase activity","secondary_identifiers":["MetaCyc:RXN-13509","EC:1.14.14.126","KEGG_REACTION:R10924"],"synonyms":[{"name":"ursolic aldehyde 28-monooxygenase activity","type":"related"},{"name":"uvaol dehydrogenase activity","type":"related"}],"termid":"GO:0102373"}


id: PBO:0004261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP citrate synthase subunit 1 (predicted)","termid":"PBO:0004261"}


id: MONDO:0003343
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A hemangioblastoma that arises from the retina. It is typically a sign of von Hippel-Lindau disease. It may also be seen as an isolated entity without systemic involvement.","definition_xrefs":["NCIT:C39783"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinal vascular disorder","termid":"MONDO:0002311"},{"relation_name":"is_a","term_name":"hemangioblastoma","termid":"MONDO:0016748"},{"relation_name":"is_a","term_name":"hemangioma of retina","termid":"MONDO:0021541"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"retinal hemangioblastoma","secondary_identifiers":["DOID:5240","UMLS:C0730303","MEDGEN:152677"],"synonyms":[{"name":"hemangioblastoma of vasculature of retina","type":"exact"},{"name":"retinal capillary hemangioblastoma","type":"exact"},{"name":"retinal hemangioblastoma","type":"exact"},{"name":"vasculature of retina hemangioblastoma","type":"exact"}],"termid":"MONDO:0003343","xrefs":{"Monarch":{"xref_id":"0003343"}}}


id: PBO:0047775
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"forkhead box C2","termid":"PBO:0047775"}


id: GO:2001157
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of proline catabolic process to glutamate.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of amine catabolic process","termid":"GO:0033242"},{"relation_name":"is_a","term_name":"negative regulation of glutamate metabolic process","termid":"GO:2000212"},{"relation_name":"is_a","term_name":"negative regulation of proline metabolic process","termid":"GO:2000215"},{"relation_name":"is_a","term_name":"regulation of proline catabolic process to glutamate","termid":"GO:2001156"},{"relation_name":"negatively_regulates","term_name":"proline catabolic process to glutamate","termid":"GO:0010133"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006520"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006520"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006520","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"negative regulation of proline catabolic process to glutamate","synonyms":[{"name":"negative regulation of proline breakdown to glutamate","type":"exact"},{"name":"negative regulation of proline degradation to glutamate","type":"exact"},{"name":"negative regulation of proline oxidation","type":"related"}],"termid":"GO:2001157"}


id: PBO:0068459
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 35, pseudogene","termid":"PBO:0068459"}


id: PBO:0082855
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Core component of transport protein particle (TRAPP) complexes I-III; TRAPP complexes are related multimeric guanine nucleotide-exchange factor for the GTPase Ypt1p, regulating ER-Golgi traffic (TRAPPI), intra-Golgi traffic (TRAPPII), endosome-Golgi traffic (TRAPPII and III) and autophagy (TRAPPIII)","termid":"PBO:0082855"}


id: PBO:0060224
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"matrix remodeling associated 5 Y-linked (pseudogene)","termid":"PBO:0060224"}


id: PBO:0086764
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; separated from neighboring gene, YAP7, by frame shift and corresponds to C-terminal part of YAP7 orthologs in other species; identified as interacting with Hsc82p and Hsp82p in high-throughput two-hybrid screens","termid":"PBO:0086764"}


id: MONDO:0007461
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Short stature-valvular heart disease-characteristic facies syndrome is characterized by severe short stature with disproportionately short legs, small hands, clinodactyly, valvular heart disease and dysmorphism (ptosis, high-arched palate, abnormal dentition). It has been described in a mother and two daughters. This syndrome is probably transmitted as an autosomal dominant trait.","definition_xrefs":["Orphanet:2868"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"short stature-valvular heart disease-characteristic facies syndrome","secondary_identifiers":["MEDGEN:338866","OMIM:126190","GARD:16612","MESH:C565094","UMLS:C1852073"],"synonyms":[{"name":"disproportionate short stature with ptosis and valvular heart lesions","type":"related"}],"termid":"MONDO:0007461","xrefs":{"Monarch":{"xref_id":"0007461"}}}


id: PBO:0042664
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CEA cell adhesion molecule 20","termid":"PBO:0042664"}


id: PBO:0071045
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 47","termid":"PBO:0071045"}


id: PBO:0041986
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 28B","termid":"PBO:0041986"}


id: PBO:0082017
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger X-linked duplicated A","termid":"PBO:0082017"}


id: PBO:0088941
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial thiosulfate sulfurtransferase/rhodanese-like domain Rdl2","termid":"PBO:0088941"}


id: GO:0098875
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A microvesicle of the epididymal fluid, from which spermatozoa acquire membrane proteins.","definition_xrefs":["GOC:mg","PMID:23177142","PMID:26112475","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microvesicle","termid":"GO:1990742"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005576"}],"interesting_parent_ids":["GO:0005575","GO:0005576"],"is_obsolete":false,"name":"epididymosome","termid":"GO:0098875"}


id: PBO:0024836
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pumilio family RNA-binding protein Nop9 (predicted)","termid":"PBO:0024836"}


id: PBO:0075531
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"speedy/RINGO cell cycle regulator family member E11","termid":"PBO:0075531"}


id: PBO:0054158
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1525","termid":"PBO:0054158"}


id: GO:0050565
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + N2-citryl-N6-acetyl-N6-hydroxy-L-lysine + N6-acetyl-N6-hydroxy-L-lysine = aerobactin + AMP + diphosphate + H+.","definition_xrefs":["RHEA:32167"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acid-amino acid ligase activity","termid":"GO:0016881"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016874","GO:0003824"],"is_obsolete":false,"name":"aerobactin synthase activity","synonyms":[{"name":"citrate:6-N-acetyl-6-N-hydroxy-L-lysine ligase (ADP-forming)","type":"exact"},{"name":"citrate:N6-acetyl-N6-hydroxy-L-lysine ligase (ADP-forming)","type":"exact"}],"termid":"GO:0050565"}


id: PBO:0111329
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome bigenesis rRNA methyltransferase Spb1","termid":"PBO:0111329"}


id: GO:0001911
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the rate of leukocyte mediated cytotoxicity.","definition_xrefs":["PMID:11911826","GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of leukocyte mediated cytotoxicity","termid":"GO:0001910"},{"relation_name":"is_a","term_name":"negative regulation of leukocyte mediated immunity","termid":"GO:0002704"},{"relation_name":"is_a","term_name":"negative regulation of cell killing","termid":"GO:0031342"},{"relation_name":"negatively_regulates","term_name":"leukocyte mediated cytotoxicity","termid":"GO:0001909"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of leukocyte mediated cytotoxicity","synonyms":[{"name":"down regulation of leukocyte mediated cytotoxicity","type":"exact"},{"name":"down-regulation of leukocyte mediated cytotoxicity","type":"exact"},{"name":"downregulation of leukocyte mediated cytotoxicity","type":"exact"},{"name":"inhibition of leukocyte mediated cytotoxicity","type":"narrow"},{"name":"negative regulation of immune cell mediated cytotoxicity","type":"exact"},{"name":"negative regulation of leucocyte mediated cytotoxicity","type":"exact"}],"termid":"GO:0001911"}


id: PR:Q9P7F9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ctr5 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P7F9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"copper transport protein ctr5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1142.05","synonyms":[{"name":"Spom972h-ctr5","type":"exact"},{"name":"copper transporter 5 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P7F9"}


id: GO:0051604
data:
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06129,106507,100602,103652,89499,110421,77334,79649],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016485"},{"annotations":[70253,77216,102567,78575,80342,80573],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006627"},{"annotations":[74940,72066,111325,71968,78095,72966,71100,75565,76342,66575,103553,102685,80498,78445,117112,88267,72818,79422,98920],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0042026"},{"annotations":[74275,69643,61996,68247,66055,65668,76435,76503,77776],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006465"},{"annotations":[87833,97996,92185],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031638"}]},"cv_name":"biological_process","definition":"Any 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id: PBO:0057985
data:
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id: GO:0004005
data:
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id: PBO:0038580
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"activator of basal transcription 1 pseudogene 1","termid":"PBO:0038580"}


id: GO:0102915
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H+ + (+)-pinoresinol + NADPH + O2 = (+)-piperitol + NADP + 2 H2O.","definition_xrefs":["EC:1.14.19.74","PMID:16785429"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"piperitol synthase activity","termid":"GO:0102915"}


id: GO:1905569
data:
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id: MONDO:1011659
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"digestive system disorder, non-human animal","termid":"MONDO:1011311"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gastric dilatation volvulus syndrome, non-human animal","secondary_identifiers":["OMIA:000404"],"termid":"MONDO:1011659","xrefs":{"Monarch":{"xref_id":"1011659"}}}


id: PBO:0044208
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cathepsin L pseudogene 8","termid":"PBO:0044208"}


id: PBO:0113394
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; YMR317W is not an essential gene","termid":"PBO:0113394"}


id: PBO:0073469
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SFXN4 pseudogene 1","termid":"PBO:0073469"}


id: MONDO:0800495
data:
  {"annotated_genes":["SJAG_04513"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86399],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013526"}]},"cv_name":"mondo","definition":"An epilepsy syndrome characterized by seizures along with developmental and/or epileptic encephalopathy or progressive neurological deterioration where age at seizure onset varies.","direct_ancestors":[{"relation_name":"is_a","term_name":"epilepsy syndrome","termid":"MONDO:0015650"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04513":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"variable-age epilepsy syndrome with developmental and/or epileptic encephalopathy or progressive neurological deterioration","references_by_uniquename":{"PB_REF:0000006":null},"synonyms":[{"name":"VAE-SDE/PND","type":"exact"}],"termid":"MONDO:0800495","terms_by_termid":{"MONDO:0013526":null},"xrefs":{"Monarch":{"xref_id":"0800495"}}}


id: FYPO:0003064
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the size, shape, or structure of the microtubule cytoskeleton is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton","termid":"FYPO:0002399"},{"relation_name":"is_a","term_name":"abnormal cytoskeleton morphology","termid":"FYPO:0003063"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000054"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0002399","FYPO:0000054"],"is_obsolete":false,"name":"abnormal microtubule cytoskeleton morphology","termid":"FYPO:0003064"}


id: PBO:0044835
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defensin beta 123","termid":"PBO:0044835"}


id: GO:0047591
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-hydroxypentanoate + acetyl-CoA = 5-hydroxy-pentanoyl-CoA + acetate.","definition_xrefs":["EC:2.8.3.14","RHEA:23496"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CoA-transferase activity","termid":"GO:0008410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016782"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674","GO:0016782"],"is_obsolete":false,"name":"5-hydroxypentanoate CoA-transferase activity","secondary_identifiers":["KEGG_REACTION:R04057","MetaCyc:5-HYDROXYPENTANOATE-COA-TRANSFERASE-RXN"],"synonyms":[{"name":"5-hydroxyvalerate CoA-transferase activity","type":"related"},{"name":"5-hydroxyvalerate coenzyme A transferase activity","type":"related"},{"name":"acetyl-CoA:5-hydroxypentanoate CoA-transferase activity","type":"related"}],"termid":"GO:0047591"}


id: PBO:0039106
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Abelson helper integration site 1","termid":"PBO:0039106"}


id: MONDO:0004449
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplastic process characterized by the proliferation of spindle to cuboidal myoepithelial cells within small breast ducts.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"breast myoepitheliosis","termid":"MONDO:0004262"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intraductal breast myoepitheliosis","secondary_identifiers":["DOID:8068","MEDGEN:268972","NCIT:C40387","UMLS:C1512935"],"termid":"MONDO:0004449","xrefs":{"Monarch":{"xref_id":"0004449"}}}


id: FYPO:0002828
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype in which the basal activity of a protein kinase is increased relative to normal. Basal protein kinase activity is the activity observed in the absence of a regulator. Abnormally elevated basal activity may or may not reach the levels observed in the normal activated state.","definition_xrefs":["PomBase:mah","PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"constitutive catalytic activity","termid":"FYPO:0000683"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"output_of","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0005447","FYPO:0001320","FYPO:0000654","FYPO:0001985"],"is_obsolete":false,"name":"constitutive protein kinase activity","synonyms":[{"name":"constitutive protein kinase activity during mitotic cell cycle","type":"related"},{"name":"constitutive protein kinase activity during vegetative growth","type":"exact"},{"name":"constitutively active protein kinase","type":"related"}],"termid":"FYPO:0002828"}


id: PBO:0080292
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 56 pseudogene","termid":"PBO:0080292"}


id: FYPO:0000327
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of trichostatin A than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0002682","FYPO:0001985","FYPO:0000003","FYPO:0000139","FYPO:0005447"],"is_obsolete":false,"name":"resistance to trichostatin A","synonyms":[{"name":"resistance to trichostatin A during mitotic cell cycle","type":"related"},{"name":"resistance to trichostatin A during vegetative growth","type":"exact"},{"name":"resistant to trichostatin A","type":"exact"}],"termid":"FYPO:0000327"}


id: MONDO:0003363
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant neoplasm involving the dermis.","direct_ancestors":[{"relation_name":"is_a","term_name":"dermis tumor","termid":"MONDO:0002300"},{"relation_name":"is_a","term_name":"skin cancer","termid":"MONDO:0002898"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005093"],"is_obsolete":false,"name":"malignant dermis tumor","secondary_identifiers":["MEDGEN:87564","NCIT:C4574","SCTID:255096006","UMLS:C0346811","DOID:5274"],"synonyms":[{"name":"cancer of dermis","type":"exact"},{"name":"dermis cancer","type":"exact"},{"name":"malignant dermal neoplasm","type":"exact"},{"name":"malignant dermis neoplasm","type":"exact"},{"name":"malignant dermis tumor","type":"exact"},{"name":"malignant neoplasm of dermis","type":"exact"},{"name":"malignant neoplasm of the dermis","type":"exact"},{"name":"malignant tumor of dermis","type":"exact"},{"name":"malignant tumor of the dermis","type":"exact"},{"name":"malignant tumour of dermis","type":"exact"},{"name":"malignant tumour of the dermis","type":"exact"}],"termid":"MONDO:0003363","xrefs":{"Monarch":{"xref_id":"0003363"}}}


id: PR:O74342
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC1A4.11c gene.","definition_xrefs":["UniProtKB:O74342","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1A4.11c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1A4.11c","synonyms":[{"name":"Spom972h-SPBC1A4.11c","type":"exact"}],"termid":"PR:O74342"}


id: PBO:0068727
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4atac small nuclear 16, pseudogene","termid":"PBO:0068727"}


id: PBO:0076641
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T-box brain transcription factor 1","termid":"PBO:0076641"}


id: PBO:0080105
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UTP18 small subunit processome component","termid":"PBO:0080105"}


id: PBO:0018115
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unconventional prefoldin chaperone involved protein complex assembly Uri1 (predicted)","termid":"PBO:0018115"}


id: PBO:0011060
data:
  {"annotation_feature_type":"gene","cv_name":"feature_relationshipprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"curator","termid":"PBO:0011060"}


id: PBO:0081471
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 345","termid":"PBO:0081471"}


id: FYPO:0005271
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which microtubule plus-end directed mitotic chromosome migration is abnormal. In microtubule plus-end directed mitotic chromosome migration, chromosomes that are laterally attached to one or more mitotic spindle microtubules migrate towards the spindle equator via plus-end-directed movement along the microtubules.","definition_xrefs":["GO:0099606","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic chromosome congression","termid":"FYPO:0000030"},{"relation_name":"is_a","term_name":"abnormal microtubule-based movement during vegetative growth","termid":"FYPO:0005461"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"part_of","termid":"FYPO:0000337"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0000641","FYPO:0000337","FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0000138","FYPO:0005447"],"is_obsolete":false,"name":"abnormal microtubule plus-end directed mitotic chromosome migration","synonyms":[{"name":"abnormal microtubule plus-end directed chromosome migration during mitosis","type":"exact"},{"name":"abnormal microtubule plus-end directed chromosome migration during mitotic cell cycle","type":"related"},{"name":"abnormal microtubule plus-end directed mitotic chromosome migration during vegetative growth","type":"exact"},{"name":"abnormal plus-end directed chromosome gliding","type":"exact"}],"termid":"FYPO:0005271"}


id: GO:0048940
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the structures of a glial cell in the anterior lateral line nerve are generated and organized. This process occurs while the initially relatively unspecialized cell is acquiring the specialized features of a glial cell in the anterior lateral line nerve.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lateral line nerve glial cell morphogenesis involved in differentiation","termid":"GO:0048938"},{"relation_name":"part_of","term_name":"anterior lateral line nerve glial cell development","termid":"GO:0048939"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anterior lateral line nerve glial cell morphogenesis involved in differentiation","termid":"GO:0048940"}


id: PBO:0017600
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SCF complex and CLRC ubiquitin ligase ligase E3 subunit Rbx1","termid":"PBO:0017600"}


id: MONDO:0008715
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A congenital malformation syndrome characterized by the association of facial and skeletal anomalies with severe intellectual deficit and occasional genitourinary anomalies.","definition_xrefs":["Orphanet:1784"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acrofacial dysostosis","termid":"MONDO:0018237"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"acrofrontofacionasal dysostosis","secondary_identifiers":["DOID:0060226","GARD:484","icd11.foundation:700995487","MEDGEN:349729","SCTID:720408003","UMLS:C1860118"],"synonyms":[{"name":"AFFN dysostosis","type":"exact"},{"name":"Affn dysostosis 1","type":"narrow"},{"name":"Richieri-Costa-Colletto syndrome","type":"exact"},{"name":"acro fronto facio nasal dysostosis","type":"related"},{"name":"acrofrontofacionasal dysostosis 1","type":"narrow"},{"name":"acrofrontofacionasal dysostosis syndrome","type":"related"},{"name":"acrofrontofacionasal dysostosis type 1","type":"narrow"},{"name":"cleft Lip/palate with frontonasal dysostosis and postaxial polysyndactyly","type":"related"},{"name":"polysyndactyly, postaxial, frontonasal dysostosis and cleft lip/palate","type":"related"},{"name":"polysyndactyly, postaxial, frontonasal dysostosis, and cleft Lip/palate","type":"related"}],"termid":"MONDO:0008715","xrefs":{"Monarch":{"xref_id":"0008715"}}}


id: GO:0016149
data:
  {"annotated_genes":["SJAG_00338"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[74192],"is_not":false,"summary":null,"term":"GO:0016149"}]},"cv_name":"molecular_function","definition":"A translation release factor that is specific for one or more particular termination codons; acts at the ribosomal A-site and require polypeptidyl-tRNA at the P-site.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"translation release factor activity","termid":"GO:0003747"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00338":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674"],"is_obsolete":false,"name":"translation release factor activity, codon specific","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0016149","terms_by_termid":{"GO:0016149":null}}


id: PBO:0073225
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"semenogelin 1","termid":"PBO:0073225"}


id: GO:0031755
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an Edg-2 lysophosphatidic acid receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endothelial differentiation G protein-coupled receptor binding","termid":"GO:0031753"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"Edg-2 lysophosphatidic acid receptor binding","synonyms":[{"name":"Edg-2 lysophosphatidic acid receptor ligand","type":"narrow"},{"name":"LPA1 receptor binding","type":"exact"}],"termid":"GO:0031755"}


id: PATO:0000016
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A scalar optical property that is the intensity, value or amount of perceived light.","definition_xrefs":["PATOC:MAH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"optical quality","termid":"PATO:0001300"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"color brightness","synonyms":[{"name":"color intensity ","type":"exact"},{"name":"color lightness ","type":"exact"},{"name":"color value ","type":"exact"}],"termid":"PATO:0000016"}


id: MONDO:0009046
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Fraser syndrome is a rare clinical entity including as main characteristics cryptophthalmos and syndactyly.","definition_xrefs":["Orphanet:2052"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"},{"relation_name":"is_a","term_name":"cryptophthalmia","termid":"MONDO:0020153"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005328"],"is_obsolete":false,"name":"Fraser syndrome","secondary_identifiers":["MESH:D058497","DOID:0090001","SCTID:204102004","MEDGEN:82692","NCIT:C118436","OMIMPS:219000","icd11.foundation:968262849","UMLS:C0265233","GARD:6465"],"synonyms":[{"name":"Fraser syndrome","type":"exact"},{"name":"Fraser-Francois syndrome","type":"related"},{"name":"Meyer-Schwickerath's syndrome","type":"related"},{"name":"Ulrich-Feichtiger syndrome","type":"related"},{"name":"cryptophthalmos syndrome","type":"related"},{"name":"cryptophthalmos with Other malformations","type":"related"},{"name":"cryptophthalmos with other malformations","type":"exact"},{"name":"cryptophthalmos-syndactyly syndrome","type":"exact"},{"name":"cyclopism","type":"related"}],"termid":"MONDO:0009046","xrefs":{"Monarch":{"xref_id":"0009046"}}}


id: PBO:0108910
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAFF interacting protein","termid":"PBO:0108910"}


id: GO:0042104
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the rate or extent of activated T cell proliferation.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of T cell proliferation","termid":"GO:0042102"},{"relation_name":"is_a","term_name":"regulation of activated T cell proliferation","termid":"GO:0046006"},{"relation_name":"positively_regulates","term_name":"activated T cell proliferation","termid":"GO:0050798"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0007155"},{"rel_name":"regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"positive regulation of activated T cell proliferation","synonyms":[{"name":"activation of activated T cell proliferation","type":"narrow"},{"name":"positive regulation of activated T lymphocyte proliferation","type":"exact"},{"name":"positive regulation of activated T-cell proliferation","type":"exact"},{"name":"positive regulation of activated T-lymphocyte proliferation","type":"exact"},{"name":"stimulation of activated T cell proliferation","type":"narrow"},{"name":"up regulation of activated T cell proliferation","type":"exact"},{"name":"up-regulation of activated T cell proliferation","type":"exact"},{"name":"upregulation of activated T cell proliferation","type":"exact"}],"termid":"GO:0042104"}


id: PBO:0018146
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eisosome assembly protein eis1","termid":"PBO:0018146"}


id: GO:0021939
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that mediates the transfer of information from the extracellular matrix to granule cell precursors resulting in a decrease in rate of granule cell precursor cell proliferation.","definition_xrefs":["GOC:dgh","GOC:dph","GOC:jid","GOC:cls","PMID:15157725","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extracellular matrix-cell signaling","termid":"GO:0035426"},{"relation_name":"part_of","term_name":"negative regulation of cerebellar granule cell precursor proliferation","termid":"GO:0021941"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"extracellular matrix-granule cell signaling involved in regulation of granule cell precursor proliferation","synonyms":[{"name":"extracellular matrix-granule cell signalling involved in regulation of granule cell precursor proliferation","type":"exact"}],"termid":"GO:0021939"}


id: PBO:0072968
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secretoglobin family 1B member 3, pseudogene","termid":"PBO:0072968"}


id: PBO:0078886
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gln (anticodon CTG) 1-3","termid":"PBO:0078886"}


id: PBO:0075084
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 134","termid":"PBO:0075084"}


id: PBO:0081615
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 543","termid":"PBO:0081615"}


id: MONDO:0100118
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id: GO:0006303
data:
  {"annotated_genes":["SJAG_02237","SJAG_04199","SJAG_00441","SJAG_05373","SJAG_16460","SJAG_01076","SJAG_03048","SJAG_00640","SJAG_01677","SJAG_04372","SJAG_02527","SJAG_00823","SJAG_05372"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88903,89526,100305,105401,111331,112111,114665,117183],"is_not":false,"summary":null,"term":"GO:0006303"},{"annotations":[114273,116707],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097680"},{"annotations":[96238],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0061674"},{"annotations":[102725],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:2001033"},{"annotations":[107775],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:2001034"}]},"cv_name":"biological_process","definition":"The repair of a double-strand break in DNA in which the two broken ends are rejoined with little or no sequence complementarity. Information at the DNA ends may be lost due to the modification of broken DNA ends. This term covers instances of separate pathways, called classical (or canonical) and alternative nonhomologous end joining (C-NHEJ and A-NHEJ). These in turn may further branch into sub-pathways, but evidence is still unclear.","definition_xrefs":["GOC:rph","PMID:10827453","PMID:24837021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"double-strand break repair","termid":"GO:0006302"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00441":null,"SJAG_00640":null,"SJAG_00823":null,"SJAG_01076":null,"SJAG_01677":null,"SJAG_02237":null,"SJAG_02527":null,"SJAG_03048":null,"SJAG_04199":null,"SJAG_04372":null,"SJAG_05372":null,"SJAG_05373":null,"SJAG_16460":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006281"}],"interesting_parent_ids":["GO:0006259","GO:0008150","GO:0006281"],"is_obsolete":false,"name":"double-strand break repair via nonhomologous end joining","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-5693571"],"synonyms":[{"name":"NHEJ","type":"exact"}],"termid":"GO:0006303","terms_by_termid":{"GO:0006303":null,"GO:0061674":null,"GO:0097680":null,"GO:2001033":null,"GO:2001034":null}}


id: GO:0006716
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving juvenile hormones, the three sesquiterpenoid derivatives that function to maintain the larval state of insects at molting and that may be required for other processes, e.g. oogenesis.","definition_xrefs":["ISBN:0198547684","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sesquiterpenoid metabolic process","termid":"GO:0006714"},{"relation_name":"is_a","term_name":"hormone metabolic process","termid":"GO:0042445"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"juvenile hormone metabolic process","synonyms":[{"name":"juvenile hormone metabolism","type":"exact"}],"termid":"GO:0006716"}


id: PBO:0039041
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AGBL carboxypeptidase 3","termid":"PBO:0039041"}


id: PBO:0004984
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-coding RNA Meu3","termid":"PBO:0004984"}


id: GO:1902555
data:
  {"annotated_genes":["SJAG_03952","SJAG_04062","SJAG_01260","SJAG_04582","SJAG_00754","SJAG_02547","SJAG_01551","SJAG_04252","SJAG_03789","SJAG_01056","SJAG_02275","SJAG_02374","SJAG_01581","SJAG_00306","SJAG_01369","SJAG_03328","SJAG_01623","SJAG_04907","SJAG_03425","SJAG_03496","SJAG_06613","SJAG_04916","SJAG_00955","SJAG_02553","SJAG_03796","SJAG_03234"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[64882,118936,92057,95325],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090730"},{"annotations":[71585,72018,72052,60656,63798,115775,118975,99848,115687,91447,104920],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005655"},{"annotations":[63797,106025,106026,72050,115777,71627,73958,60655,91448,79636,76461,115689,97144],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000172"},{"annotations":[78998,104475,118579,118941,117566,72079],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120330"},{"annotations":[79350,60719,71731,74273],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000214"}]},"cv_name":"cellular_component","definition":"A protein complex which is capable of endoribonuclease activity.","definition_xrefs":["GOC:TermGenie","GOC:bhm","PMID:18191223"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endonuclease complex","termid":"GO:1905348"}],"gene_count":26,"genes_by_uniquename":{"SJAG_00306":null,"SJAG_00754":null,"SJAG_00955":null,"SJAG_01056":null,"SJAG_01260":null,"SJAG_01369":null,"SJAG_01551":null,"SJAG_01581":null,"SJAG_01623":null,"SJAG_02275":null,"SJAG_02374":null,"SJAG_02547":null,"SJAG_02553":null,"SJAG_03234":null,"SJAG_03328":null,"SJAG_03425":null,"SJAG_03496":null,"SJAG_03789":null,"SJAG_03796":null,"SJAG_03952":null,"SJAG_04062":null,"SJAG_04252":null,"SJAG_04582":null,"SJAG_04907":null,"SJAG_04916":null,"SJAG_06613":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"endoribonuclease complex","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:1902555","terms_by_termid":{"GO:0000172":null,"GO:0000214":null,"GO:0005655":null,"GO:0090730":null,"GO:0120330":null}}


id: GO:0051851
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an host alters or subverts a process in a symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:cc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modulation of process of another organism","termid":"GO:0035821"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"host-mediated perturbation of symbiont process","synonyms":[{"name":"modification by host of symbiont morphology or physiology","type":"related"},{"name":"modulation by host of symbiont process","type":"exact"}],"termid":"GO:0051851"}


id: GO:0010932
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of macrophage tolerance induction.","definition_xrefs":["GOC:BHF","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of tolerance induction","termid":"GO:0002643"},{"relation_name":"regulates","term_name":"macrophage tolerance induction","termid":"GO:0010931"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of macrophage tolerance induction","termid":"GO:0010932"}


id: FYPO:0002664
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more messenger RNAs that are normally expressed during a cellular response to stress measured in a cell is higher than normal (i.e. higher than observed in wild-type cells during vegetative growth).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA level during vegetative growth","termid":"FYPO:0000825"},{"relation_name":"is_a","term_name":"altered level of stress responsive gene mRNA during vegetative growth","termid":"FYPO:0004363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0006551","FYPO:0005447"],"is_obsolete":false,"name":"increased level of stress responsive gene mRNA during vegetative growth","synonyms":[{"name":"increased level of cellular response to stress responsive gene mRNA","type":"exact"},{"name":"increased level of stress response gene mRNA during vegetative growth","type":"exact"},{"name":"increased level of stress responsive gene RNA during vegetative growth","type":"exact"},{"name":"increased level of stress responsive gene mRNA during mitotic cell cycle","type":"related"},{"name":"increased level of stress responsive gene transcripts during vegetative growth","type":"exact"},{"name":"increased mRNA level of stress responsive genes during vegetative growth","type":"exact"},{"name":"increased stress responsive gene mRNA accumulation during vegetative growth","type":"related"}],"termid":"FYPO:0002664"}


id: PBO:0064634
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoribosyl pyrophosphate amidotransferase","termid":"PBO:0064634"}


id: MONDO:0004878
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"female breast carcinoma","termid":"MONDO:0004379"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"female breast upper-outer quadrant cancer","secondary_identifiers":["DOID:9773","MEDGEN:509326","SCTID:188154003","UMLS:C0153552","ICD9:174.4"],"termid":"MONDO:0004878","xrefs":{"Monarch":{"xref_id":"0004878"}}}


id: PBO:0084583
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Merged open reading frame; does not encode a discrete protein; YCL062W as originally annotated as an independent ORF, but as a result of sequence changes, it was merged with an adjacent ORF into a single reading frame, designated YCL063W","termid":"PBO:0084583"}


id: PBO:0000361
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rad32 nuclease","termid":"PBO:0000361"}


id: PBO:0040648
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bromodomain adjacent to zinc finger domain 2B","termid":"PBO:0040648"}


id: FYPO:0001033
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which double-strand break repair is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal DNA repair","termid":"FYPO:0006569"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0001312","FYPO:0001320","FYPO:0000298"],"is_obsolete":false,"name":"normal double-strand break repair","synonyms":[{"name":"normal double-strand break repair during mitotic cell cycle","type":"related"},{"name":"normal double-strand break repair during vegetative growth","type":"exact"}],"termid":"FYPO:0001033"}


id: PBO:0057755
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1914","termid":"PBO:0057755"}


id: GO:0061574
data:
  {"annotated_genes":["SJAG_00888","SJAG_05926"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[76092,114737],"is_not":false,"summary":null,"term":"GO:0061574"}]},"cv_name":"cellular_component","definition":"A protein complex involved in regulation of mRNA processing and apoptosis. It binds to RNA in a sequence-independent manner and is recruited to the EJC prior to or during the splicing process. In humans the core proteins are RNPS1, SAP18 and ACIN1.","definition_xrefs":["PMID:16314458","GOC:dph","PMID:22388736","PMID:12665594"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00888":null,"SJAG_05926":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"ASAP complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0061574","terms_by_termid":{"GO:0061574":null}}


id: PBO:0057364
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 548ag-2","termid":"PBO:0057364"}


id: GO:0042161
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of a lipoprotein by oxidation of one or more amino acids or the lipid group.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipoprotein modification","termid":"GO:0042160"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lipoprotein oxidation","termid":"GO:0042161"}


id: GO:0003383
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The actin-mediated process that results in the contraction of the apical end of a polarized columnar epithelial cell.","definition_xrefs":["GOC:dph","GOC:ascb_2009","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actin-mediated cell contraction","termid":"GO:0070252"},{"relation_name":"part_of","term_name":"epithelial cell morphogenesis","termid":"GO:0003382"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"apical constriction","termid":"GO:0003383"}


id: PBO:0057431
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 550b-1","termid":"PBO:0057431"}


id: PBO:0052999
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"laminin subunit beta 3","termid":"PBO:0052999"}


id: PBO:0029073
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_sumoylation","termid":"PBO:0029073"}


id: PR:Q9P7I6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC24B10.20 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P7I6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized oxidoreductase C24B10.20 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC24B10.20","synonyms":[{"name":"Spom972h-SPCC24B10.20","type":"exact"}],"termid":"PR:Q9P7I6"}


id: GO:0046648
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of gamma-delta T cell proliferation.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of T cell proliferation","termid":"GO:0042102"},{"relation_name":"is_a","term_name":"positive regulation of gamma-delta T cell activation","termid":"GO:0046645"},{"relation_name":"is_a","term_name":"regulation of gamma-delta T cell proliferation","termid":"GO:0046646"},{"relation_name":"positively_regulates","term_name":"gamma-delta T cell proliferation","termid":"GO:0046630"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0007155"},{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"positive regulation of gamma-delta T cell proliferation","synonyms":[{"name":"activation of gamma-delta T cell proliferation","type":"narrow"},{"name":"positive regulation of gamma-delta T lymphocyte proliferation","type":"exact"},{"name":"positive regulation of gamma-delta T-cell proliferation","type":"exact"},{"name":"positive regulation of gamma-delta T-lymphocyte proliferation","type":"exact"},{"name":"stimulation of gamma-delta T cell proliferation","type":"narrow"},{"name":"up regulation of gamma-delta T cell proliferation","type":"exact"},{"name":"up-regulation of gamma-delta T cell proliferation","type":"exact"},{"name":"upregulation of gamma-delta T cell proliferation","type":"exact"}],"termid":"GO:0046648"}


id: MONDO:0001718
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of the sclera.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"scleral disorder","termid":"MONDO:0001269"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"scleritis","secondary_identifiers":["HP:0100532","ICD9:379.00","SCTID:78370002","MESH:D015423","DOID:13452","MEDGEN:48585","icd11.foundation:2097802831","UMLS:C0036416","NCIT:C119046"],"synonyms":[{"name":"scleritis","type":"exact"},{"name":"scleritis (disease)","type":"exact"}],"termid":"MONDO:0001718","xrefs":{"Monarch":{"xref_id":"0001718"}}}


id: GO:0032053
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a ciliary basal body, a short cylindrical array of microtubules and associated proteins found at the base of a eukaryotic cilium (also called flagellum).","definition_xrefs":["PMID:9889124","GOC:dph","GOC:cilia","GOC:jl","GOC:krc","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule organizing center organization","termid":"GO:0031023"},{"relation_name":"is_a","term_name":"cilium organization","termid":"GO:0044782"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0000226"},{"rel_name":"part_of","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0007010","GO:0008150","GO:0000226"],"is_obsolete":false,"name":"ciliary basal body organization","synonyms":[{"name":"microtubule basal body organisation","type":"broad"},{"name":"microtubule basal body organization","type":"broad"},{"name":"microtubule basal body organization and biogenesis","type":"related"}],"termid":"GO:0032053"}


id: PBO:0002788
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.5.1.5","termid":"PBO:0002788"}


id: GO:1904029
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of cyclin-dependent protein kinase activity.","definition_xrefs":["PMID:22995177","GOC:TermGenie","GO_REF:0000059","GOC:als"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of cyclin-dependent protein kinase activity (obsolete GO:1904029)","termid":"GO:1904029"}


id: PBO:0015247
data:
  {"annotation_feature_type":"gene","cv_name":"subunit_composition","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homomeric(5)","termid":"PBO:0015247"}


id: PBO:0085714
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein Involved in spore wall assembly; localizes to lipid droplets found on or outside of the prospore membrane; shares similarity with Lds2p and Rrt8p, and a strain mutant for all 3 genes exhibits reduced dityrosine fluorescence relative to the single mutants","termid":"PBO:0085714"}


id: MONDO:0027687
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"poisoning","termid":"MONDO:0029000"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"raltegravir toxicity","secondary_identifiers":["Orphanet:240905"],"termid":"MONDO:0027687","xrefs":{"Monarch":{"xref_id":"0027687"}}}


id: GO:0021748
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the dorsal cochlear nucleus over time, from its formation to the mature structure.","definition_xrefs":["GO_REF:0000021","GOC:dgh","GOC:curators","GOC:cls","GOC:dph","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cochlear nucleus development","termid":"GO:0021747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dorsal cochlear nucleus development","termid":"GO:0021748"}


id: SO:0001680
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A regulatory region that is involved in the control of the process of translation.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulatory_region","termid":"SO:0005836"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation_regulatory_region","synonyms":[{"name":"translation regulatory region","type":"exact"}],"termid":"SO:0001680"}


id: GO:0016540
data:
  {"annotated_genes":["SJAG_03524","SJAG_02980","SJAG_02902"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[58485,62208,68629],"is_not":false,"summary":null,"term":"GO:0016540"}]},"cv_name":"biological_process","definition":"Processing which a protein carries out itself. This involves actions such as the autolytic removal of residues to generate the mature form of the protein.","definition_xrefs":["GOC:ai","PMID:9335337"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein processing","termid":"GO:0016485"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02902":null,"SJAG_02980":null,"SJAG_03524":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051604"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0051604"],"is_obsolete":false,"name":"protein autoprocessing","references_by_uniquename":{"GO_REF:0000104":null},"termid":"GO:0016540","terms_by_termid":{"GO:0016540":null}}


id: PBO:0006183
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_regulation_target","termid":"PBO:0006183"}


id: PBO:0061742
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurexophilin 1","termid":"PBO:0061742"}


id: MONDO:1012828
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any muscular dystrophy that occurs in rabbits due to a mutation in the ANO5 gene created by genetic engineering or gene editing.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"muscular dystrophy, non-human animal","termid":"MONDO:0024965"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"muscular dystrophy, ANO5-related, rabbit","secondary_identifiers":["OMIA:002242-9986"],"termid":"MONDO:1012828","xrefs":{"Monarch":{"xref_id":"1012828"}}}


id: PBO:0078348
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Glu (CTC) 14-1","termid":"PBO:0078348"}


id: PBO:0048875
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgin A6 family member A","termid":"PBO:0048875"}


id: PBO:0077328
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 64","termid":"PBO:0077328"}


id: PATO:0000514
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000514 intolerant value (obsolete PATO:0000514)","termid":"PATO:0000514"}


id: GO:0030018
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Platelike region of a muscle sarcomere to which the plus ends of actin filaments are attached.","definition_xrefs":["ISBN:0815316194","GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"I band","termid":"GO:0031674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"Z disc","synonyms":[{"name":"Z band","type":"exact"},{"name":"Z disk","type":"exact"},{"name":"Z line","type":"exact"}],"termid":"GO:0030018"}


id: PBO:0049183
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycine rich extracellular protein 1","termid":"PBO:0049183"}


id: PBO:0044650
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DCTN1 antisense RNA 1","termid":"PBO:0044650"}


id: GO:0008285
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the rate or extent of cell proliferation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell population proliferation","termid":"GO:0042127"},{"relation_name":"is_a","term_name":"negative regulation of cellular process","termid":"GO:0048523"},{"relation_name":"negatively_regulates","term_name":"cell population proliferation","termid":"GO:0008283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cell population proliferation","synonyms":[{"name":"down regulation of cell proliferation","type":"exact"},{"name":"down-regulation of cell proliferation","type":"exact"},{"name":"downregulation of cell proliferation","type":"exact"},{"name":"inhibition of cell proliferation","type":"narrow"},{"name":"negative regulation of cell proliferation","type":"related"}],"termid":"GO:0008285"}


id: MONDO:0800157
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disorder of amino acid metabolism that has its basis in the disruption of the metabolism of lysine, hydroxylysine, and/or tryptophan.","definition_xrefs":["MONDO:patterns/inborn_metabolic"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inborn disorder of tryptophan metabolism","termid":"MONDO:0017350"},{"relation_name":"is_a","term_name":"inborn disorder of lysine and hydroxylysine metabolism","termid":"MONDO:0017351"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004736"],"is_obsolete":false,"name":"inborn disorder of lysine, hydroxylysine, and tryptophan metabolism","termid":"MONDO:0800157","xrefs":{"Monarch":{"xref_id":"0800157"}}}


id: PBO:0063337
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proliferating cell nuclear antigen pseudogene 2","termid":"PBO:0063337"}


id: PBO:0061872
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oocyte expressed protein","termid":"PBO:0061872"}


id: MONDO:0001589
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete vaginal enterocele (obsolete MONDO:0001589)","secondary_identifiers":["ICD9:618.6","DOID:1283","MESH:D006547","SCTID:398061002"],"synonyms":[{"name":"enterocele","type":"broad"},{"name":"vaginal hernia","type":"related"}],"termid":"MONDO:0001589","xrefs":{"Monarch":{"xref_id":"0001589"}}}


id: PBO:0005697
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA cleavage and polyadenylation specificity factor complex associated protein","termid":"PBO:0005697"}


id: PBO:0083087
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding protein of the mitochondria; involved in repair of mitochondrial DNA; has ATPase activity and binds to DNA mismatches; has homology to E. coli MutS; transcription is induced during meiosis","termid":"PBO:0083087"}


id: MONDO:0006927
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infections with bacteria of the family rickettsiaceae.","definition_xrefs":["MESH:D012288"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Rickettsiosis","termid":"MONDO:0006956"},{"relation_name":"is_a","term_name":"gram-negative bacterial infections","termid":"MONDO:0021678"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rickettsiaceae infectious disease","secondary_identifiers":["EFO:1001128"],"synonyms":[{"name":"Rickettsiaceae caused disease or disorder","type":"exact"},{"name":"Rickettsiaceae disease or disorder","type":"exact"},{"name":"Rickettsiaceae infection","type":"related"},{"name":"infection, Rickettsiaceae","type":"related"},{"name":"infections, Rickettsiaceae","type":"related"},{"name":"rickettsialpox","type":"related"}],"termid":"MONDO:0006927","xrefs":{"Monarch":{"xref_id":"0006927"}}}


id: PBO:0068063
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 368","termid":"PBO:0068063"}


id: PBO:0026828
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_Lys63-specific_deubiquitinase_activity","termid":"PBO:0026828"}


id: SO:1000105
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000105 sequence_variant_affecting_polypeptide_amino_acid_sequence (obsolete SO:1000105)","synonyms":[{"name":"mutation affecting polypeptide amino acid sequence","type":"related"},{"name":"sequence variant affecting polypeptide amino acid sequence","type":"exact"}],"termid":"SO:1000105"}


id: PBO:0006190
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-not_happens_during","termid":"PBO:0006190"}


id: MONDO:0024376
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"sleep-wake disorder","termid":"MONDO:0003406"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sleep disorder, initiating and maintaining sleep","secondary_identifiers":["UMLS:C0021603","MEDGEN:43897","SCTID:194437008"],"synonyms":[{"name":"disorders of initiating and maintaining sleep","type":"exact"}],"termid":"MONDO:0024376","xrefs":{"Monarch":{"xref_id":"0024376"}}}


id: GO:0043685
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification process that results in the conversion of glutamate charged on a tRNA(Gln) to glutaminyl-tRNA.","definition_xrefs":["PMID:9342308","GOC:jsg","PMID:3340166"],"direct_ancestors":[{"relation_name":"is_a","term_name":"charged-tRNA amino acid modification","termid":"GO:0019988"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0006399","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"conversion of glutamyl-tRNA to glutaminyl-tRNA","termid":"GO:0043685"}


id: PBO:0088735
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Prp19 complex subunit Cwf4","termid":"PBO:0088735"}


id: PBO:0062338
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 6 subfamily D member 1 pseudogene","termid":"PBO:0062338"}


id: GO:0043664
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A host-derived membrane that surrounds one or more bacteroids (such as nitrogen-fixing bacteroids within legume root nodule cells).","definition_xrefs":["GOC:cc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell part","termid":"GO:0033643"},{"relation_name":"part_of","term_name":"host bacteroid-containing symbiosome","termid":"GO:0043663"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host peribacteroid membrane","termid":"GO:0043664"}


id: PBO:0090636
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S4","termid":"PBO:0090636"}


id: PBO:0085245
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Peptidyl-prolyl cis-trans isomerase (PPIase); binds to FK506 and rapamycin; also binds to the nonhistone chromatin binding protein Hmo1p and may regulate its assembly or function; associates with promoters of ribosomal protein genes; acts as chaperone to prevent protein aggregation; N-terminally propionylated in vivo; mutation is functionally complemented by human FKBP1A","termid":"PBO:0085245"}


id: PBO:0062567
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 10 subfamily AF member 1 pseudogene","termid":"PBO:0062567"}


id: PBO:0053953
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1258","termid":"PBO:0053953"}


id: PBO:0046527
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endoplasmic reticulum oxidoreductase 1 beta","termid":"PBO:0046527"}


id: MONDO:1012532
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"calvarial hyperostotic syndrome, non-human animal","termid":"MONDO:1011658"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calvarial hyperostotic syndrome, dog","secondary_identifiers":["OMIA:002245-9615"],"termid":"MONDO:1012532","xrefs":{"Monarch":{"xref_id":"1012532"}}}


id: MONDO:0013294
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inherited susceptibility or predisposition to developing atopic dermatitis that is associated with variation in the region 4q22.1.","definition_xrefs":["PMID:19517137","MONDO:patterns/inherited_susceptibility","DOID:0110104"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"excluded_subClassOf","term_name":"atopic eczema","termid":"MONDO:0004980"},{"relation_name":"is_a","term_name":"dermatitis, atopic, susceptibility to","termid":"MONDO:0100178"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dermatitis, atopic, 8","secondary_identifiers":["OMIM:613518","UMLS:C3150763","MEDGEN:462113"],"synonyms":[{"name":"ATOD8","type":"exact"},{"name":"atopic dermatitis type 8","type":"exact"},{"name":"dermatitis, atopic, 8","type":"exact"},{"name":"dermatitis, atopic, severity of","type":"related"},{"name":"dermatitis, atopic, susceptibility to, 8","type":"exact"}],"termid":"MONDO:0013294","xrefs":{"Monarch":{"xref_id":"0013294"}}}


id: PBO:0067015
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 25, pseudogene","termid":"PBO:0067015"}


id: PBO:0057138
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 219a-1","termid":"PBO:0057138"}


id: PBO:0053819
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1080","termid":"PBO:0053819"}


id: MONDO:0014451
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any focal segmental glomerulosclerosis in which the cause of the disease is a mutation in the PAX2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited focal segmental glomerulosclerosis","termid":"MONDO:0005363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"focal segmental glomerulosclerosis 7","secondary_identifiers":["DOID:0111132","GARD:16045","UMLS:C4014925","MEDGEN:863362","OMIM:616002"],"synonyms":[{"name":"FSGS7","type":"exact"},{"name":"PAX2 focal segmental glomerulosclerosis","type":"exact"},{"name":"focal segmental glomerulosclerosis 7","type":"exact"},{"name":"focal segmental glomerulosclerosis caused by mutation in PAX2","type":"exact"},{"name":"focal segmental glomerulosclerosis type 7","type":"exact"},{"name":"glomerulosclerosis, focal segmental, 7","type":"related"}],"termid":"MONDO:0014451","xrefs":{"Monarch":{"xref_id":"0014451"}}}


id: GO:0047725
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: sucrose + 2,1-beta-D-fructosyl(n) = glucose + 2,1-beta-D-fructosyl(n+1).","definition_xrefs":["EC:2.4.1.9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824","GO:0016757"],"is_obsolete":false,"name":"inulosucrase activity","secondary_identifiers":["MetaCyc:RXN-15518","RHEA:15745"],"synonyms":[{"name":"sucrose 1-fructosyl transferase activity","type":"related"},{"name":"sucrose 1-fructosyltransferase activity","type":"related"},{"name":"sucrose:2,1-beta-D-fructan 1-beta-D-fructosyltransferase activity","type":"related"}],"termid":"GO:0047725"}


id: PBO:0012576
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WW domain containing conserved fungal protein","termid":"PBO:0012576"}


id: MONDO:0004767
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inflammatory disease involving a pathogenic inflammatory response in the seminal vesicle.","definition_xrefs":["MONDO:patterns/inflammatory_disease_by_site"],"direct_ancestors":[{"relation_name":"is_a","term_name":"orchitis","termid":"MONDO:0006882"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vesiculitis","secondary_identifiers":["UMLS:C0042588","MEDGEN:508285","NCIT:C12787","ICD9:608.0","SCTID:27001009","DOID:9365"],"synonyms":[{"name":"gland, seminal vesicle","type":"exact"},{"name":"inflammation of seminal vesicle","type":"exact"},{"name":"seminal Sacs","type":"exact"},{"name":"seminal vesicle","type":"exact"},{"name":"seminal vesicle inflammation","type":"exact"},{"name":"seminal vesicles","type":"exact"},{"name":"seminal vesiculitis","type":"exact"}],"termid":"MONDO:0004767","xrefs":{"Monarch":{"xref_id":"0004767"}}}


id: MOD:01707
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a residue hydroxyl group with an isotope tagged reagent acyloxy group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-acylated residue","termid":"MOD:00671"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isotope tagged reagent O-acylated residue","termid":"MOD:01707"}


id: PBO:0075329
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spermatogenesis and oogenesis specific basic helix-loop-helix 2","termid":"PBO:0075329"}


id: PBO:0014254
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEA complex subunit, human WDR24 family","termid":"PBO:0014254"}


id: GO:0070596
data:
  {"annotated_genes":["SJAG_04184","SJAG_00610","SJAG_02916","SJAG_04236","SJAG_00424","SJAG_01028","SJAG_03057","SJAG_02278","SJAG_04666"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[79027,71035,71857,73966,73784],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070600"},{"annotations":[95307,103211,92791,89801],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0070610"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of (1->3)-alpha-D-glucans, compounds composed of glucose residues linked by (1->3)-alpha-D-glucosidic bonds.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-glucan biosynthetic process","termid":"GO:0030979"},{"relation_name":"is_a","term_name":"(1->3)-alpha-glucan metabolic process","termid":"GO:0070595"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00424":null,"SJAG_00610":null,"SJAG_01028":null,"SJAG_02278":null,"SJAG_02916":null,"SJAG_03057":null,"SJAG_04184":null,"SJAG_04236":null,"SJAG_04666":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"(1->3)-alpha-glucan biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"1,3-alpha-glucan anabolism","type":"exact"},{"name":"1,3-alpha-glucan biosynthesis","type":"exact"},{"name":"1,3-alpha-glucan biosynthetic process","type":"exact"},{"name":"1,3-alpha-glucan formation","type":"exact"},{"name":"1,3-alpha-glucan synthesis","type":"exact"},{"name":"alpha-1,3 glucan anabolism","type":"exact"},{"name":"alpha-1,3 glucan biosynthesis","type":"exact"},{"name":"alpha-1,3 glucan biosynthetic process","type":"exact"},{"name":"alpha-1,3 glucan formation","type":"exact"},{"name":"alpha-1,3 glucan synthesis","type":"exact"}],"termid":"GO:0070596","terms_by_termid":{"GO:0070600":null,"GO:0070610":null}}


id: PBO:0000273
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 snoRNP-associated protein Lcp5 (predicted)","termid":"PBO:0000273"}


id: PATO:0001331
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An odor quality inhering in a bearer by virtue of the bearer's having odour.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"odor","termid":"PATO:0000058"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"odorous","termid":"PATO:0001331"}


id: PBO:0026687
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_carboxypeptidase_activity","termid":"PBO:0026687"}


id: GO:0019553
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of glutamate, via the intermediate L-citramalate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glutamate catabolic process","termid":"GO:0006538"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006520"],"is_obsolete":false,"name":"glutamate catabolic process via L-citramalate","secondary_identifiers":["MetaCyc:GLUDEG-II-PWY"],"synonyms":[{"name":"glutamate breakdown via L-citramalate","type":"exact"},{"name":"glutamate degradation via L-citramalate","type":"exact"}],"termid":"GO:0019553"}


id: PBO:0060873
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neural EGFL like 1","termid":"PBO:0060873"}


id: GO:0039710
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The assembly of an icosahedral viral capsid in the cytoplasm. Often occurs by assembling around the viral genome.","definition_xrefs":["VZ:1950"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic capsid assembly","termid":"GO:0039709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cytoplasmic icosahedral capsid assembly","termid":"GO:0039710"}


id: FYECO:0000325
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which ethylene glycol was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ ethylene glycol","termid":"FYECO:0000325"}


id: PBO:0000757
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat protein, human WDR55 family, involved in ribosome biogenesis (predicted)","termid":"PBO:0000757"}


id: GO:0047085
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-hydroxyphenylacetonitrile + H+ + NADPH + O2 = 4-hydroxymandelonitrile + H2O + NADP+.","definition_xrefs":["RHEA:50732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"hydroxyphenylacetonitrile 2-monooxygenase activity","secondary_identifiers":["KEGG_REACTION:R02708","MetaCyc:1.14.13.42-RXN"],"synonyms":[{"name":"4-hydroxyphenylacetonitrile hydroxylase activity","type":"exact"},{"name":"4-hydroxyphenylacetonitrile monooxygenase activity","type":"exact"},{"name":"4-hydroxyphenylacetonitrile,NADPH:oxygen oxidoreductase (2-hydroxylating)","type":"exact"}],"termid":"GO:0047085"}


id: FYPO:0008086
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which autophagic degradation of the nucleus during nitrogen starvation is abolished .","definition_xrefs":["PMID:37191320"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal nucleophagy","termid":"FYPO:0008085"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abolished nucleophagy during nitrogen starvation","termid":"FYPO:0008086"}


id: PBO:0046752
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exocyst complex component 6","termid":"PBO:0046752"}


id: PBO:0069052
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 298, pseudogene","termid":"PBO:0069052"}


id: PATO:0000755
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000755 vocalization value (obsolete PATO:0000755)","termid":"PATO:0000755"}


id: PBO:0039656
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adaptor related protein complex 1 subunit sigma 3","termid":"PBO:0039656"}


id: GO:0042426
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of choline (2-hydroxyethyltrimethylammonium), an amino alcohol that occurs widely in living organisms as a constituent of certain types of phospholipids and in the neurotransmitter acetylcholine.","definition_xrefs":["GOC:jl","ISBN:0192801023"],"direct_ancestors":[{"relation_name":"is_a","term_name":"choline metabolic process","termid":"GO:0019695"},{"relation_name":"is_a","term_name":"biogenic amine catabolic process","termid":"GO:0042402"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"choline catabolic process","secondary_identifiers":["Reactome:R-HSA-6798163"],"synonyms":[{"name":"choline breakdown","type":"exact"},{"name":"choline catabolism","type":"exact"},{"name":"choline degradation","type":"exact"}],"termid":"GO:0042426"}


id: PBO:0042956
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil-helix-coiled-coil-helix domain containing 2 pseudogene 10","termid":"PBO:0042956"}


id: MONDO:0020460
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acquired von Willebrand syndrome (AVWS) is a bleeding disorder marked by the same biological anomalies as those seen in hereditary von Willebrand disease (VWD) but which occurs in association with another underlying pathology, generally in elderly patients without any personal or family history of bleeding anomalies.","definition_xrefs":["Orphanet:99147"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hemorrhagic disease","termid":"MONDO:0002243"},{"relation_name":"is_a","term_name":"acquired coagulation factor deficiency","termid":"MONDO:0020599"},{"relation_name":"is_a","term_name":"von Willebrand disease (hereditary or acquired)","termid":"MONDO:0024574"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"acquired von willebrand syndrome","secondary_identifiers":["DOID:0111146","SCTID:234451005","UMLS:C0272362","GARD:5573","MedDRA:10069495","PMID:28028990","MEDGEN:543999","NANDO:1200899"],"synonyms":[{"name":"AVWS","type":"exact"},{"name":"Willebrand disease, acquired","type":"related"},{"name":"acquired von Willebrand disease","type":"exact"},{"name":"acquired von Willebrand disease (hereditary or acquired)","type":"exact"},{"name":"acquired von willebrand disease","type":"exact"}],"termid":"MONDO:0020460","xrefs":{"Monarch":{"xref_id":"0020460"}}}


id: PBO:0028785
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3-K9_methylation_at_protein_coding_gene","termid":"PBO:0028785"}


id: MONDO:0005230
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of the dermis and subcutaneous tissues caused by a bacterial infection. Symptoms include erythema, edema, and pain to the affected area.","definition_xrefs":["NCIT:C26715"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesiculobullous skin disease","termid":"MONDO:0006617"},{"relation_name":"is_a","term_name":"skin disease caused by bacterial infection","termid":"MONDO:0024295"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"cellulitis","secondary_identifiers":["ICD9:682.8","SCTID:128045006","MESH:D002481","Wikipedia:Cellulitis","MEDGEN:40174","HP:0100658","EFO:0003035","DOID:3488","ICD9:682.9","UMLS:C0007642"],"synonyms":[{"name":"cellulitis","type":"exact"},{"name":"cellulitis (disease)","type":"exact"}],"termid":"MONDO:0005230","xrefs":{"Monarch":{"xref_id":"0005230"}}}


id: GO:0044433
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Any constituent part of cytoplasmic vesicle, a vesicle formed of membrane or protein, found in the cytoplasm of a cell.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete cytoplasmic vesicle part (obsolete GO:0044433)","termid":"GO:0044433"}


id: PBO:0076654
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T-box transcription factor 15","termid":"PBO:0076654"}


id: PBO:0030597
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-altered_level_of_substance_in_cytosol","termid":"PBO:0030597"}


id: GO:0002068
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a glandular epithelial cell over time, from its formation to the mature structure. A glandular epithelial cell is a columnar/cuboidal epithelial cell is a cell found in a two dimensional sheet with a free surface exposed to the lumen of a gland.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"columnar/cuboidal epithelial cell development","termid":"GO:0002066"},{"relation_name":"part_of","term_name":"glandular epithelial cell differentiation","termid":"GO:0002067"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glandular epithelial cell development","termid":"GO:0002068"}


id: SO:0001748
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A SL2_acceptor_site which appends the SL3 RNA leader sequence to the 5' end of an mRNA. SL3 acceptor sites occur in genes in internal segments of polycistronic transcripts.","definition_xrefs":["SO:nlw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SL2_acceptor_site","termid":"SO:0000709"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SL3_acceptor_site","synonyms":[{"name":"SL3 acceptor site","type":"exact"}],"termid":"SO:0001748"}


id: PBO:0109916
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucosidase I Gls1","termid":"PBO:0109916"}


id: PBO:0000876
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fusion cytochrome c oxidase assembly protein Cox1101, mitochondrial ribosomal protein Rsm22 (predicted)","termid":"PBO:0000876"}


id: MOD:01300
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification produced by formation of an adduct of an L-histidine residue with 4-hydroxynonenal artificially reduced by a reagent such as NaBH4.","definition_xrefs":["PubMed:11910026","PubMed:15133838","Unimod:335#H","PubMed:12148805"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"histidine 4-hydroxynonenal adduct","termid":"MOD:01239"},{"relation_name":"is_a","term_name":"reduced 4-hydroxynonenal adduct","termid":"MOD:00642"},{"relation_name":"is_a","term_name":"modified L-histidine residue","termid":"MOD:00909"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:01155"}],"interesting_parent_ids":["MOD:01155"],"is_obsolete":false,"name":"reduced histidine 4-hydroxynonenal adduct","synonyms":[{"name":"HNE+Delta:H(2)","type":"related"},{"name":"reduced 4-Hydroxynonenal","type":"related"}],"termid":"MOD:01300"}


id: SO:0000138
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An epigenetically modified gene, rearranged at the DNA level.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"rearranged_at_DNA_level","termid":"SO:0000904"},{"relation_name":"is_a","term_name":"epigenetically_modified_gene","termid":"SO:0000898"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gene_rearranged_at_DNA_level","synonyms":[{"name":"gene rearranged at DNA level","type":"exact"}],"termid":"SO:0000138"}


id: GO:0034205
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The generation of amyloid-beta by cleavage of the amyloid precursor protein (APP).","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amyloid precursor protein catabolic process","termid":"GO:0042987"},{"relation_name":"is_a","term_name":"amyloid-beta metabolic process","termid":"GO:0050435"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"amyloid-beta formation","synonyms":[{"name":"beta-amyloid formation","type":"exact"},{"name":"beta-amyloid polypeptide formation from APP","type":"exact"},{"name":"beta-amyloid polypeptide formation from amyloid precursor protein","type":"exact"}],"termid":"GO:0034205"}


id: GO:1990770
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which force is generated within smooth muscle tissue, resulting in a change in muscle geometry in the intestine between the stomach and the large intestine.","definition_xrefs":["PMID:11991626"],"direct_ancestors":[{"relation_name":"is_a","term_name":"smooth muscle contraction","termid":"GO:0006939"},{"relation_name":"part_of","term_name":"intestine smooth muscle contraction","termid":"GO:0014827"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"small intestine smooth muscle contraction","termid":"GO:1990770"}


id: GO:0098557
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The side (leaflet) of the smooth endoplasmic reticulum membrane that faces the cytoplasm.","definition_xrefs":["GOC:ab","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic side of endoplasmic reticulum membrane","termid":"GO:0098554"},{"relation_name":"part_of","term_name":"smooth endoplasmic reticulum membrane","termid":"GO:0030868"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005783"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005789"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0005783","GO:0005789"],"is_obsolete":false,"name":"cytoplasmic side of smooth endoplasmic reticulum membrane","termid":"GO:0098557"}


id: GO:0044684
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 7,8-dihydromethanopterin + NADPH = 5,6,7,8-tetrahydromethanopterin + NADP.","definition_xrefs":["PMID:15028691","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor","termid":"GO:0016646"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"dihydromethanopterin reductase activity","secondary_identifiers":["EC:1.5.99.15","RHEA:42804"],"termid":"GO:0044684"}


id: PBO:0077100
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translocase of inner mitochondrial membrane 8B pseudogene 1","termid":"PBO:0077100"}


id: MONDO:0005072
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Neuroblastoma (NB) is the most common solid, extracranial childhood tumor. It is an aggressive pediatric cancer that originates from neural crest tissues of the sympathetic nervous system.","definition_xrefs":["PMID:32903387"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"autonomic nervous system neoplasm","termid":"MONDO:0002366"},{"relation_name":"excluded_subClassOf","term_name":"central nervous system Ewing sarcoma/peripheral primitive neuroectodermal tumor","termid":"MONDO:0016713"},{"relation_name":"is_a","term_name":"neuroblastic tumor","termid":"MONDO:0006316"},{"relation_name":"is_a","term_name":"neurocristopathy","termid":"MONDO:0021635"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuroblastoma","secondary_identifiers":["SCTID:432328008","GARD:7185","NANDO:2200040","MEDGEN:18012","MedDRA:10029260","ICDO:9500/3","Orphanet:635","DOID:769","EFO:0000621","MESH:D009447","NCIT:C3270","ONCOTREE:NBL","UMLS:C0027819","NIFSTD:birnlex_12631"],"synonyms":[{"name":"NB","type":"related"},{"name":"neural Crest tumor, malignant","type":"exact"},{"name":"neuroblastoma","type":"exact"},{"name":"neuroblastoma (Schwannian Stroma-poor)","type":"exact"},{"name":"neuroblastoma, malignant","type":"exact"}],"termid":"MONDO:0005072","xrefs":{"Monarch":{"xref_id":"0005072"}}}


