# terms

id: PBO:0045941
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ephrin B1","termid":"PBO:0045941"}


id: MONDO:0003951
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A hemangioma arising from the skin of the scrotum.","definition_xrefs":["NCIT:C6387"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skin hemangioma","termid":"MONDO:0003110"},{"relation_name":"is_a","term_name":"benign neoplasm of scrotum","termid":"MONDO:0021472"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"scrotal hemangioma","secondary_identifiers":["MEDGEN:235583","DOID:663","UMLS:C1335936"],"synonyms":[{"name":"angioma of scrotum","type":"exact"},{"name":"angioma of the scrotum","type":"exact"},{"name":"hemangioma of scrotum","type":"exact"},{"name":"hemangioma of the scrotum","type":"exact"},{"name":"scrotal angioma","type":"exact"},{"name":"scrotal hemangioma","type":"exact"},{"name":"scrotum hemangioma","type":"exact"}],"termid":"MONDO:0003951","xrefs":{"Monarch":{"xref_id":"0003951"}}}


id: GO:0031611
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The subunits of the regulatory particle that directly associate with the core complex of a proteasome located in the endoplasmic reticulum of a cell.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete ER proteasome regulatory particle, base subcomplex (obsolete GO:0031611)","termid":"GO:0031611"}


id: GO:0046784
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of intronless viral mRNA from the host nucleus to the cytoplasm for translation.","definition_xrefs":["PMID:11598019"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral process","termid":"GO:0016032"},{"relation_name":"part_of","term_name":"viral gene expression","termid":"GO:0019080"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"viral mRNA export from host cell nucleus","synonyms":[{"name":"intronless viral mRNA export from host cell nucleus","type":"exact"},{"name":"intronless viral mRNA export from host nucleus","type":"related"},{"name":"intronless viral mRNA export out of nucleus","type":"exact"},{"name":"intronless viral mRNA transport from nucleus to cytoplasm","type":"exact"},{"name":"intronless viral mRNA-nucleus export","type":"exact"}],"termid":"GO:0046784"}


id: MONDO:0012544
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Brachydactyly-syndactyly, Zhao type is a recently described syndrome associating a brachydactyly type A4 (short middle phalanges of the 2nd and 5th fingers and absence of middle phalanges of the 2nd to 5th toes) and a syndactyly of the 2nd and 3rd toes. Metacarpals and metatarsals anomalies are common.","definition_xrefs":["Orphanet:93409"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal genetic disease","termid":"MONDO:0000429"},{"relation_name":"is_a","term_name":"skeletal system disorder","termid":"MONDO:0005172"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brachydactyly-syndactyly syndrome","secondary_identifiers":["OMIM:610713","UMLS:C1853137","DOID:0050689","MEDGEN:377836","MESH:C565193","GARD:16821"],"synonyms":[{"name":"BDSD","type":"related"},{"name":"Bdsd","type":"related"},{"name":"brachydactyly-syndactyly syndrome","type":"exact"},{"name":"brachydactyly-syndactyly, Zhao type","type":"related"},{"name":"brachydactyly-syndactyly-oligodactyly syndrome","type":"related"}],"termid":"MONDO:0012544","xrefs":{"Monarch":{"xref_id":"0012544"}}}


id: SOFP:internal_synonym
data:
  {"annotation_feature_type":"gene","cv_name":"feature_property","direct_ancestors":[{"relation_name":"is_a","term_name":"feature_property","termid":"SOFP:feature_property"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"internal_synonym","termid":"SOFP:internal_synonym"}


id: MONDO:0020210
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A hyperopia that is part of a larger syndrome.","definition_xrefs":["MONDO:patterns/syndromic"],"gene_count":0,"genotype_count":0,"name":"obsolete syndromic hyperopia (obsolete MONDO:0020210)","secondary_identifiers":["Orphanet:98622"],"synonyms":[{"name":"syndrome associated with hyperopia","type":"exact"},{"name":"syndromic hyperopia","type":"exact"}],"termid":"MONDO:0020210","xrefs":{"Monarch":{"xref_id":"0020210"}}}


id: GO:0043539
data:
  {"annotated_genes":["SJAG_01401","SJAG_00457","SJAG_00142","SJAG_04509","SJAG_03453","SJAG_03699","SJAG_04502","SJAG_03695","SJAG_03090","SJAG_01213","SJAG_03371","SJAG_00439","SJAG_03618","SJAG_02057","SJAG_00333","SJAG_04614","SJAG_04666","SJAG_04140","SJAG_03340","SJAG_00424","SJAG_02605"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[69341,75877,75883,88263,89597,89804,91221,91552,92796,105497,109650,110927,118754],"is_not":false,"summary":null,"term":"GO:0043539"},{"annotations":[70682,117458,80142,101987,74383,66376,113350,111587],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061575"}]},"cv_name":"molecular_function","definition":"Binds to and increases the activity of a protein serine/threonine kinase.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein kinase activator activity","termid":"GO:0030295"}],"gene_count":21,"genes_by_uniquename":{"SJAG_00142":null,"SJAG_00333":null,"SJAG_00424":null,"SJAG_00439":null,"SJAG_00457":null,"SJAG_01213":null,"SJAG_01401":null,"SJAG_02057":null,"SJAG_02605":null,"SJAG_03090":null,"SJAG_03340":null,"SJAG_03371":null,"SJAG_03453":null,"SJAG_03618":null,"SJAG_03695":null,"SJAG_03699":null,"SJAG_04140":null,"SJAG_04502":null,"SJAG_04509":null,"SJAG_04614":null,"SJAG_04666":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0140677"}],"interesting_parent_ids":["GO:0098772","GO:0030234","GO:0140677","GO:0003674"],"is_obsolete":false,"name":"protein serine/threonine kinase activator activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"protein ser/thr kinase activator activity","type":"exact"}],"termid":"GO:0043539","terms_by_termid":{"GO:0043539":null,"GO:0061575":null}}


id: PR:Q10441
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC12B10.08c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10441"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA(Ile)-lysidine synthase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC12B10.08c","synonyms":[{"name":"Spom972h-SPAC12B10.08c","type":"exact"},{"name":"tRNA(Ile)-2-lysyl-cytidine synthase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"tRNA(Ile)-lysidine synthetase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q10441"}


id: SO:0001155
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A motif of four consecutive peptide residues that may contain one H-bond, which, if present, is between the main-chain CO of the first residue and the main-chain NH of the fourth and is characterized by the dihedral angles: Residue(i+1): phi ~ -60 degrees, psi ~ -30 degrees. Residue(i+2): phi ~ -120 degrees, psi ~ 120 degrees.","definition_xrefs":["PMID:2371257","SO:cb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta_turn","termid":"SO:0001133"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"beta_turn_type_eight","synonyms":[{"name":"beta turn type eight","type":"exact"},{"name":"type VIII beta turn","type":"exact"},{"name":"type VIII turn","type":"exact"}],"termid":"SO:0001155"}


id: MONDO:0019627
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenital alacrima is characterized by deficient lacrimation (ranging from a complete absence of tears to hyposecretion of tears) that is present from birth.","definition_xrefs":["Orphanet:91416"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lacrimal apparatus disorder","termid":"MONDO:0001854"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"isolated congenital alacrima","secondary_identifiers":["UMLS:C4273963","GARD:16799","SCTID:717262004","MEDGEN:896261"],"synonyms":[{"name":"nonsyndromic congenital alacrima","type":"exact"}],"termid":"MONDO:0019627","xrefs":{"Monarch":{"xref_id":"0019627"}}}


id: GO:0035833
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of berbamunine, an isoquinoline alkaloid.","definition_xrefs":["GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benzyl isoquinoline alkaloid biosynthetic process","termid":"GO:0009708"},{"relation_name":"is_a","term_name":"berbamunine metabolic process","termid":"GO:0035832"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"berbamunine biosynthetic process","synonyms":[{"name":"berbamunine anabolism","type":"exact"},{"name":"berbamunine biosynthesis","type":"exact"},{"name":"berbamunine formation","type":"exact"},{"name":"berbamunine synthesis","type":"exact"}],"termid":"GO:0035833"}


id: PBO:0042406
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell division cycle 20","termid":"PBO:0042406"}


id: PBO:0051469
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable (I)-63 (pseudogene)","termid":"PBO:0051469"}


id: GO:0019114
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: catechol + O2 = a muconate.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete catechol dioxygenase activity (obsolete GO:0019114)","termid":"GO:0019114"}


id: PBO:0091655
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uridine ribohydrolase Urh1","termid":"PBO:0091655"}


id: PBO:0046597
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group K3 member 7","termid":"PBO:0046597"}


id: PBO:0062569
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 10 subfamily AH member 1 pseudogene","termid":"PBO:0062569"}


id: GO:0070239
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the occurrence or rate of activated T cell autonomous cell death.","definition_xrefs":["GOC:mtg_apoptosis","ISBN:0781765196","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of immune system process","termid":"GO:0002682"},{"relation_name":"is_a","term_name":"regulation of T cell apoptotic process","termid":"GO:0070232"},{"relation_name":"regulates","term_name":"activated T cell autonomous cell death","termid":"GO:0070238"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of activated T cell autonomous cell death","synonyms":[{"name":"regulation of ACAD","type":"broad"},{"name":"regulation of activated T cell apoptosis","type":"broad"},{"name":"regulation of activated T lymphocyte autonomous cell death","type":"exact"},{"name":"regulation of activated T-cell autonomous cell death","type":"exact"},{"name":"regulation of activated T-lymphocyte autonomous cell death","type":"exact"},{"name":"regulation of activated cell autonomous cell death","type":"broad"}],"termid":"GO:0070239"}


id: PBO:0030436
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_tRNA-Asp_C38_methylation","termid":"PBO:0030436"}


id: PR:O13930
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sec2 gene.","definition_xrefs":["UniProtKB:O13930","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rab guanine nucleotide exchange factor sec2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23C4.10","synonyms":[{"name":"GDP-GTP exchange factor sec2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-sec2","type":"exact"}],"termid":"PR:O13930"}


id: SO:0001246
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The loop of the hairpin loop formed by folding of the pre-miRNA.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"miRNA_primary_transcript_region","termid":"SO:0001243"},{"relation_name":"part_of","term_name":"pre_miRNA","termid":"SO:0001244"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"miRNA_loop","synonyms":[{"name":"miRNA loop","type":"exact"}],"termid":"SO:0001246"}


id: PBO:0091428
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane ammonium transmembrane transporter Amt3","termid":"PBO:0091428"}


id: PBO:0091357
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Catabolism of ARginine, after S. cerevisiae","termid":"PBO:0091357"}


id: MONDO:0001660
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Advanced retinopathy due to diabetes mellitus characterized by the formation of new vessels in the retina. The new vessels are abnormal and fragile. If hemorrhage occurs due to the vascular fragility, there is increased risk of vision loss or blindness.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diabetic retinopathy","termid":"MONDO:0005266"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0005066"],"is_obsolete":false,"name":"proliferative diabetic retinopathy","secondary_identifiers":["NCIT:C84457","MEDGEN:56347","DOID:13207","UMLS:C0154830","ICD9:362.02","SCTID:59276001","EFO:0009322","icd11.foundation:348602398"],"termid":"MONDO:0001660","xrefs":{"Monarch":{"xref_id":"0001660"}}}


id: GO:0009839
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The portion of the SCF ubiquitin ligase complex that contains sites required for recognition (and recruitment) of the substrate to the complex.","definition_xrefs":["PMID:11790542","PMID:9857172"],"gene_count":0,"genotype_count":0,"name":"obsolete SCF complex substrate recognition subunit (obsolete GO:0009839)","synonyms":[{"name":"SCF complex substrate recognition subunit","type":"exact"}],"termid":"GO:0009839"}


id: PBO:0000075
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sequence orphan","termid":"PBO:0000075"}


id: GO:0005507
data:
  {"annotated_genes":["SJAG_03322","SJAG_05398","SJAG_MIT04","SJAG_MIT20","SJAG_01996","SJAG_00668","SJAG_04677","SJAG_00449","SJAG_04553","SJAG_01140","SJAG_00802","SJAG_02399","SJAG_01694"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[61623,66672,69100,74695,75281,78199,78425,102484,107237,115420,117438,119416,119466],"is_not":false,"summary":null,"term":"GO:0005507"}]},"cv_name":"molecular_function","definition":"Binding to a copper (Cu) ion.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transition metal ion binding","termid":"GO:0046914"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00449":null,"SJAG_00668":null,"SJAG_00802":null,"SJAG_01140":null,"SJAG_01694":null,"SJAG_01996":null,"SJAG_02399":null,"SJAG_03322":null,"SJAG_04553":null,"SJAG_04677":null,"SJAG_05398":null,"SJAG_MIT04":null,"SJAG_MIT20":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0046872"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0046872","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"copper ion binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"copper binding","type":"exact"},{"name":"copper/cadmium binding","type":"broad"}],"termid":"GO:0005507","terms_by_termid":{"GO:0005507":null}}


id: PBO:0048532
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GEMIN7 antisense RNA 1","termid":"PBO:0048532"}


id: PBO:0109615
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyl-CoA:amino acid N-acyltransferase, pseudogene","termid":"PBO:0109615"}


id: PBO:0084659
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondria-associated F-box protein; involved in maintenance of normal mitochondrial morphology; interacts with Skp1p through the F-box motif; preferentially localizes to the mother cell during budding","termid":"PBO:0084659"}


id: PBO:0002649
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin-like protein Klp3","termid":"PBO:0002649"}


id: GO:0090429
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of events in which an endogenous biotic stimulus is received by a cell and converted into a molecular signal.","definition_xrefs":["GOC:tb","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete detection of endogenous biotic stimulus (obsolete GO:0090429)","termid":"GO:0090429"}


id: GO:0090421
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Initiation of a region of tissue in a plant embryo that is composed of one or more undifferentiated cells capable of undergoing mitosis and differentiation.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meristem initiation","termid":"GO:0010014"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"embryonic meristem initiation","termid":"GO:0090421"}


id: MONDO:0014762
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any visceral heterotaxy in which the cause of the disease is a mutation in the MMP21 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"visceral heterotaxy","termid":"MONDO:0018677"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterotaxy, visceral, 7, autosomal","secondary_identifiers":["UMLS:C4225217","MEDGEN:902629","OMIM:616749"],"synonyms":[{"name":"HTX7","type":"exact"},{"name":"MMP21 visceral heterotaxy","type":"exact"},{"name":"heterotaxy, visceral, 7, autosomal","type":"exact"},{"name":"heterotaxy, visceral, 7, autosomal; HTX7","type":"exact"},{"name":"visceral heterotaxy caused by mutation in MMP21","type":"exact"}],"termid":"MONDO:0014762","xrefs":{"Monarch":{"xref_id":"0014762"}}}


id: GO:0102136
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: H+ + 3-epi-6-deoxocathasterone + reduced (NADPH-hemoprotein reductase) + O2 = 6=deoxotyphasterol + oxidized (NADPH-hemoprotein reductase) + H2O.","definition_xrefs":["GOC:pz","PMID:17138693"],"gene_count":0,"genotype_count":0,"name":"obsolete 3-epi-6-deoxocathasterone C-23 hydroxylase activity (obsolete GO:0102136)","termid":"GO:0102136"}


id: FYPO:0002137
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of an RNA catabolic process is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_output","term_name":"increased RNA level during vegetative growth","termid":"FYPO:0000825"},{"relation_name":"is_a","term_name":"abnormal RNA catabolic process during vegetative growth","termid":"FYPO:0002136"},{"relation_name":"is_a","term_name":"decreased RNA catabolic process","termid":"FYPO:0003552"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0000294","FYPO:0001985"],"is_obsolete":false,"name":"decreased RNA catabolic process during vegetative growth","synonyms":[{"name":"decreased RNA breakdown during vegetative growth","type":"exact"},{"name":"decreased RNA catabolic process during mitotic cell cycle","type":"related"},{"name":"decreased RNA catabolism during vegetative growth","type":"exact"},{"name":"decreased RNA degradation during vegetative growth","type":"exact"},{"name":"reduced RNA catabolic process during vegetative growth","type":"exact"}],"termid":"FYPO:0002137"}


id: GO:0004742
data:
  {"annotated_genes":["SJAG_02158"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[62857],"is_not":false,"summary":null,"term":"GO:0004742"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-N6-dihydrolipoyl-L-lysyl-[protein] + acetyl-CoA = (R)-N6-(S8-acetyldihydrolipoyl)-L-lysyl-[protein] + CoA.","definition_xrefs":["RHEA:17017"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-acetyltransferase activity","termid":"GO:0016418"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02158":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0016740","GO:0140096","GO:0016746","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"dihydrolipoyllysine-residue acetyltransferase activity","references_by_uniquename":{"GO_REF:0000003":null},"secondary_identifiers":["EC:2.3.1.12","GO:0030523","Reactome:R-HSA-9861667"],"synonyms":[{"name":"acetyl-CoA: enzyme-6-N-(dihydrolipoyl)lysine S-acetyltransferase activity","type":"related"},{"name":"acetyl-CoA: enzyme-N6-(dihydrolipoyl)lysine S-acetyltransferase activity","type":"related"},{"name":"acetyl-CoA:dihydrolipoamide S-acetyltransferase activity","type":"related"},{"name":"dihydrolipoamide S-acetyltransferase activity","type":"exact"},{"name":"dihydrolipoamide S-acyltransferase activity","type":"related"},{"name":"dihydrolipoate acetyltransferase activity","type":"related"},{"name":"dihydrolipoic transacetylase activity","type":"related"},{"name":"dihydrolipoyl acetyltransferase activity","type":"related"},{"name":"enzyme-dihydrolipoyllysine:acetyl-CoA S-acetyltransferase activity","type":"related"},{"name":"lipoate acetyltransferase activity","type":"related"},{"name":"lipoate transacetylase activity","type":"related"},{"name":"lipoic acetyltransferase activity","type":"related"},{"name":"lipoic acid acetyltransferase activity","type":"related"},{"name":"lipoic transacetylase activity","type":"related"},{"name":"lipoylacetyltransferase activity","type":"related"},{"name":"thioltransacetylase A activity","type":"narrow"},{"name":"transacetylase X activity","type":"narrow"}],"termid":"GO:0004742","terms_by_termid":{"GO:0004742":null}}


id: PBO:0084444
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Maltose permease; part of the complex locus MAL2","termid":"PBO:0084444"}


id: GO:0070035
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: purine NTP + H2O = purine NDP + phosphate, to drive the unwinding of a DNA or RNA helix.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete purine NTP-dependent helicase activity (obsolete GO:0070035)","termid":"GO:0070035"}


id: PBO:0076619
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin folding cofactor B","termid":"PBO:0076619"}


id: GO:1901943
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of (+)-epi-alpha-bisabolol.","definition_xrefs":["GOC:TermGenie","PMID:22867794"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sesquiterpenoid biosynthetic process","termid":"GO:0016106"},{"relation_name":"is_a","term_name":"(+)-epi-alpha-bisabolol metabolic process","termid":"GO:1901941"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"(+)-epi-alpha-bisabolol biosynthetic process","synonyms":[{"name":"(+)-epi-alpha-bisabolol anabolism","type":"exact"},{"name":"(+)-epi-alpha-bisabolol biosynthesis","type":"exact"},{"name":"(+)-epi-alpha-bisabolol formation","type":"exact"},{"name":"(+)-epi-alpha-bisabolol synthesis","type":"exact"}],"termid":"GO:1901943"}


id: MONDO:0021239
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm (disease) that involves the urethra.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"urethral disorder","termid":"MONDO:0004184"},{"relation_name":"is_a","term_name":"urinary system neoplasm","termid":"MONDO:0021066"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"urethra neoplasm","secondary_identifiers":["MEDGEN:12014","EFO:0003846","NCIT:C3428","UMLS:C0041971"],"synonyms":[{"name":"neoplasm of the urethra","type":"exact"},{"name":"neoplasm of urethra","type":"exact"},{"name":"neoplasms. urethra","type":"exact"},{"name":"tumor of the urethra","type":"exact"},{"name":"tumor of urethra","type":"exact"},{"name":"tumors. urethra","type":"exact"},{"name":"tumour of the urethra","type":"exact"},{"name":"tumour of urethra","type":"exact"},{"name":"urethra neoplasm (disease)","type":"exact"},{"name":"urethra neoplasms","type":"exact"},{"name":"urethra tumor","type":"exact"},{"name":"urethra tumors","type":"exact"},{"name":"urethra tumour","type":"exact"},{"name":"urethra tumours","type":"exact"},{"name":"urethral neoplasm","type":"exact"},{"name":"urethral neoplasms","type":"exact"},{"name":"urethral tumor","type":"exact"},{"name":"urethral tumors","type":"exact"},{"name":"urethral tumour","type":"exact"},{"name":"urethral tumours","type":"exact"}],"termid":"MONDO:0021239","xrefs":{"Monarch":{"xref_id":"0021239"}}}


id: MONDO:0013032
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any generalized epilepsy in which the cause of the disease is a mutation in the CASR gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epilepsy, idiopathic generalized, susceptibility to, 8","secondary_identifiers":["DOID:0111322","MEDGEN:414549","OMIM:612899","UMLS:C2752062"],"synonyms":[{"name":"CASR generalised epilepsy","type":"exact"},{"name":"CASR generalized epilepsy","type":"exact"},{"name":"EIG8","type":"related"},{"name":"epilepsy idiopathic generalized, susceptibility to, 8","type":"exact"},{"name":"epilepsy, idiopathic generalized, susceptibility to, 8","type":"exact"},{"name":"epilepsy, idiopathic generalized, susceptibility to, type 8","type":"exact"},{"name":"generalised epilepsy caused by mutation in CASR","type":"exact"},{"name":"generalized epilepsy caused by mutation in CASR","type":"exact"},{"name":"susceptibility to idiopathic generalised epilepsy 8","type":"related"},{"name":"susceptibility to idiopathic generalized epilepsy 8","type":"related"}],"termid":"MONDO:0013032","xrefs":{"Monarch":{"xref_id":"0013032"}}}


id: PBO:0002043
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved eukaryotic mitochondrial protein (predicted)","termid":"PBO:0002043"}


id: GO:0030909
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The post-translational removal of peptide sequences from within a protein sequence, by a process not involving inteins.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein splicing","termid":"GO:0030908"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0051604"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0051604"],"is_obsolete":false,"name":"non-intein-mediated protein splicing","termid":"GO:0030909"}


id: FYPO:0004500
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the rate or occurrence of DNA polymerase processivity factor activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal DNA polymerase processivity factor activity","termid":"FYPO:0004499"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000707","FYPO:0001985"],"is_obsolete":false,"name":"decreased DNA polymerase processivity factor activity","synonyms":[{"name":"reduced DNA polymerase processivity factor activity","type":"exact"}],"termid":"FYPO:0004500"}


id: PBO:0031134
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_regulation_of_translation_in_response_to_oxidative_stress","termid":"PBO:0031134"}


id: GO:1905518
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of presynaptic active zone assembly.","definition_xrefs":["PMID:15797875","GOC:rl","GOC:TermGenie","GOC:BHF","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular component organization","termid":"GO:0051128"},{"relation_name":"regulates","term_name":"presynaptic active zone assembly","termid":"GO:1904071"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of presynaptic active zone assembly","synonyms":[{"name":"regulation of pre-synaptic active zone assembly","type":"exact"},{"name":"regulation of pre-synaptic active zone component assembly","type":"narrow"},{"name":"regulation of pre-synaptic active zone component formation","type":"narrow"},{"name":"regulation of pre-synaptic active zone formation","type":"exact"},{"name":"regulation of presynaptic active zone formation","type":"exact"}],"termid":"GO:1905518"}


id: PBO:0072787
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sarcoma antigen 2, pseudogene","termid":"PBO:0072787"}


id: PR:Q10240
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug133 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10240"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 133 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4G9.07","synonyms":[{"name":"Spom972h-mug133","type":"exact"}],"termid":"PR:Q10240"}


id: GO:0021570
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of rhombomere 4 over time, from its formation to the mature structure. Rhombomeres are transverse segments of the developing rhombencephalon. Rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates. Rhombomeres are numbered in anterior to posterior order.","definition_xrefs":["GOC:dgh","GOC:cls","GO_REF:0000021","GOC:curators","GOC:dph","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rhombomere development","termid":"GO:0021546"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"rhombomere 4 development","termid":"GO:0021570"}


id: PBO:0005224
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"separase/separin","termid":"PBO:0005224"}


id: FYPO:0000874
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the dimethylation of lysine at position 9 of histone H3 in centromeric regions occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone H3-K9 dimethylation at centromere during vegetative growth","termid":"FYPO:0000867"},{"relation_name":"is_a","term_name":"increased histone H3-K9 dimethylation during vegetative growth","termid":"FYPO:0000873"},{"relation_name":"is_a","term_name":"increased histone H3-K9 methylation at centromere during vegetative growth","termid":"FYPO:0005066"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0002494","FYPO:0001320","FYPO:0002274","FYPO:0000002"],"is_obsolete":false,"name":"increased histone H3-K9 dimethylation at centromere during vegetative growth","synonyms":[{"name":"increased centromeric histone H3-K9 dimethylation during vegetative growth","type":"exact"},{"name":"increased histone H3 K9 dimethylation at centromere during vegetative growth","type":"exact"},{"name":"increased histone H3-K9 dimethylation at centromere during mitotic cell cycle","type":"related"},{"name":"increased histone H3K9 dimethylation at centromere during vegetative growth","type":"exact"},{"name":"increased histone H3K9me2 at centromere during vegetative growth","type":"exact"},{"name":"increased histone lysine H3 K9 dimethylation at centromere during vegetative growth","type":"exact"}],"termid":"FYPO:0000874"}


id: GO:0046903
data:
  {"annotated_genes":["SJAG_03718","SJAG_02518","SJAG_01563","SJAG_01048","SJAG_02320","SJAG_01772","SJAG_03005","SJAG_01448","SJAG_00355","SJAG_03246","SJAG_02587","SJAG_02366","SJAG_04509","SJAG_02012","SJAG_03864","SJAG_03357","SJAG_04517","SJAG_03938","SJAG_03499","SJAG_00826","SJAG_01722","SJAG_02572","SJAG_04343","SJAG_03763","SJAG_00280","SJAG_02753","SJAG_00332","SJAG_04966","SJAG_03915","SJAG_03536","SJAG_04960","SJAG_04058","SJAG_00661","SJAG_01925","SJAG_02368","SJAG_02004","SJAG_02166","SJAG_07004","SJAG_04044","SJAG_00430","SJAG_01697","SJAG_03754"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[71903,88757,113293,88350,71146,95362,71810,71474,72407,73723,91839,105442,78381,97810,70691,92381,89123,92635,94227,103025,95396,91510,117521],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006887"},{"annotations":[100543],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0045921"},{"annotations":[94212,88257,98753],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0017157"},{"annotations":[70185,90940,118601,60353,80178,92696,75468,80552],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006904"},{"annotations":[60354,66331,114540,102283,91110,99912,118109,88984],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0090522"}]},"cv_name":"biological_process","definition":"The controlled release of a substance by a cell or a tissue.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transport","termid":"GO:0006810"}],"gene_count":42,"genes_by_uniquename":{"SJAG_00280":null,"SJAG_00332":null,"SJAG_00355":null,"SJAG_00430":null,"SJAG_00661":null,"SJAG_00826":null,"SJAG_01048":null,"SJAG_01448":null,"SJAG_01563":null,"SJAG_01697":null,"SJAG_01722":null,"SJAG_01772":null,"SJAG_01925":null,"SJAG_02004":null,"SJAG_02012":null,"SJAG_02166":null,"SJAG_02320":null,"SJAG_02366":null,"SJAG_02368":null,"SJAG_02518":null,"SJAG_02572":null,"SJAG_02587":null,"SJAG_02753":null,"SJAG_03005":null,"SJAG_03246":null,"SJAG_03357":null,"SJAG_03499":null,"SJAG_03536":null,"SJAG_03718":null,"SJAG_03754":null,"SJAG_03763":null,"SJAG_03864":null,"SJAG_03915":null,"SJAG_03938":null,"SJAG_04044":null,"SJAG_04058":null,"SJAG_04343":null,"SJAG_04509":null,"SJAG_04517":null,"SJAG_04960":null,"SJAG_04966":null,"SJAG_07004":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"secretion","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0046903","terms_by_termid":{"GO:0006887":null,"GO:0006904":null,"GO:0017157":null,"GO:0045921":null,"GO:0090522":null}}


id: PBO:0070413
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"replication protein A4","termid":"PBO:0070413"}


id: FYPO:0004174
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which conjugation does not occur in cells of the h+ mating type.","definition_xrefs":["PomBase:mah","PMID:9003326"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sterile","termid":"FYPO:0000280"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000301"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000301"],"is_obsolete":false,"name":"h+ specific sterility","synonyms":[{"name":"h+-specific sterility","type":"exact"},{"name":"h-plus-specific mating defect","type":"related"},{"name":"h-plus-specific sterility","type":"exact"}],"termid":"FYPO:0004174"}


id: MONDO:0976127
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Muggenthaler-Chowdhury-Chioza syndrome","secondary_identifiers":["OMIM:621063"],"termid":"MONDO:0976127","xrefs":{"Monarch":{"xref_id":"0976127"}}}


id: FYPO:0007778
data:
  {"alleles_by_uniquename":{"SJAG_02013:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02013","name":"pyp1delta","uniquename":"SJAG_02013:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[119730],"is_not":false,"summary":null,"term":"FYPO:0007778"}]},"cv_name":"fission_yeast_phenotype","definition":"A phenotype in which hyphae form fewer branched filaments than normal.","definition_xrefs":["PomBase:mah","PMID:31150379"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal hyphal growth","termid":"FYPO:0007773"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02013":null},"genotype_count":1,"genotypes_by_uniquename":{"pyp1delta":{"display_name":"pyp1delta","display_uniquename":"pyp1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02013:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0007773"}],"interesting_parent_ids":["FYPO:0007773","FYPO:0000002"],"is_obsolete":false,"name":"decreased hyphal branching","references_by_uniquename":{"PMID:31150379":null},"single_locus_annotated_genes":["SJAG_02013"],"single_locus_genotype_uniquenames":["pyp1delta"],"synonyms":[{"name":"decreased number of branched filaments","type":"exact"}],"termid":"FYPO:0007778","terms_by_termid":{"FYECO:0000314":null,"FYPO:0007778":null,"FYPO_EXT:0000001":null}}


id: PBO:0050498
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homeobox B8","termid":"PBO:0050498"}


id: GO:0016825
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of any acid phosphorus-nitrogen bond.","definition_xrefs":["EC:3.9.1.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity","termid":"GO:0016787"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"hydrolase activity, acting on acid phosphorus-nitrogen bonds","termid":"GO:0016825"}


id: PBO:0116845
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial translational activator Mtf2","termid":"PBO:0116845"}


id: PBO:0050390
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A3 pseudogene 14","termid":"PBO:0050390"}


id: GO:0071343
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of the process in which a contractile ring is assembled in a specific location.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of establishment of actomyosin contractile ring localization (obsolete GO:0071343)","synonyms":[{"name":"negative regulation of establishment of actomyosin contractile ring localization","type":"exact"},{"name":"negative regulation of establishment of contractile ring localisation involved in cell cycle cytokinesis","type":"exact"},{"name":"negative regulation of establishment of contractile ring localization involved in cell cycle cytokinesis","type":"exact"},{"name":"negative regulation of establishment of contractile ring localization involved in cytokinesis during cell cycle","type":"related"}],"termid":"GO:0071343"}


id: FYPO:0002322
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of all-trans-farnesyl diphosphate (FPP) measured in a cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased phospholipid level","termid":"FYPO:0001289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased cellular FPP level","synonyms":[{"name":"decreased cellular 2-trans,6-trans-farnesyl diphosphate level","type":"exact"},{"name":"decreased cellular FPP accumulation","type":"related"},{"name":"decreased cellular FPP level during mitotic cell cycle","type":"related"},{"name":"decreased cellular FPP level during vegetative growth","type":"exact"},{"name":"decreased cellular farnesyl diphosphate level","type":"broad"},{"name":"decreased cellular farnesyl pyrophosphate level","type":"broad"},{"name":"reduced cellular FPP level","type":"exact"}],"termid":"FYPO:0002322"}


id: SO:0000523
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Genomic DNA of immunoglobulin/T-cell receptor gene in rearranged configuration including at least one V-gene, one VJ-gene and one C-gene.","direct_ancestors":[{"relation_name":"has_part","term_name":"V_gene_segment","termid":"SO:0000466"},{"relation_name":"has_part","term_name":"C_gene_segment","termid":"SO:0000478"},{"relation_name":"has_part","term_name":"VJ_gene_segment","termid":"SO:0000576"},{"relation_name":"is_a","term_name":"vertebrate_immunoglobulin_T_cell_receptor_rearranged_gene_cluster","termid":"SO:0000938"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V_VJ_C_cluster","synonyms":[{"name":"V VJ C cluster","type":"exact"},{"name":"V-(VJ)-C-CLUSTER","type":"exact"}],"termid":"SO:0000523"}


id: PBO:0072098
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S12 pseudogene 29","termid":"PBO:0072098"}


id: PBO:0046068
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 3 subunit K pseudogene 3","termid":"PBO:0046068"}


id: MONDO:0001175
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A cataract disease in which the cataract contains some transparent protein","definition_xrefs":["Wikipedia:Cataract"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"senile cataract","termid":"MONDO:0004847"},{"relation_name":"is_a","term_name":"cataract","termid":"MONDO:0005129"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"immature cataract","secondary_identifiers":["MEDGEN:755282","icd11.foundation:1444156961","UMLS:C2960113","DOID:10997","SCTID:446474007"],"synonyms":[{"name":"incipient cataract","type":"exact"},{"name":"incipient senile cataract","type":"exact"},{"name":"water clefts","type":"exact"}],"termid":"MONDO:0001175","xrefs":{"Monarch":{"xref_id":"0001175"}}}


id: PBO:0050406
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein C pseudogene 8","termid":"PBO:0050406"}


id: PBO:0067150
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 200, pseudogene","termid":"PBO:0067150"}


id: GO:0085036
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The space between the symbiont plasma membrane and the extrahaustorial membrane of the host.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"extracellular region","termid":"GO:0005576"},{"relation_name":"part_of","term_name":"host extracellular space","termid":"GO:0043655"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005576"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005576","GO:0005575"],"is_obsolete":false,"name":"extrahaustorial matrix","termid":"GO:0085036"}


id: MONDO:0019099
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Any of the forms of soft tissue neoplasm that have a rare incidence.","definition_xrefs":["MONDO:patterns/rare"],"gene_count":0,"genotype_count":0,"name":"obsolete rare soft tissue tumor (obsolete MONDO:0019099)","secondary_identifiers":["Orphanet:71209"],"synonyms":[{"name":"rare mesenchymal tumor","type":"exact"},{"name":"rare soft tissue neoplasm","type":"exact"}],"termid":"MONDO:0019099","xrefs":{"Monarch":{"xref_id":"0019099"}}}


id: SO:0000739
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"DNA belonging to the genome of a plastid such as a chloroplast. The nucleomorph is the nuclei of the plastic.","direct_ancestors":[{"relation_name":"is_a","term_name":"organelle_sequence","termid":"SO:0000736"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleomorphic_sequence","synonyms":[{"name":"nucleomorphic sequence","type":"exact"}],"termid":"SO:0000739"}


id: PBO:0080468
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vesicle transport through interaction with t-SNAREs 1A","termid":"PBO:0080468"}


id: PBO:0044596
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DDB1 and CUL4 associated factor 4 like 2","termid":"PBO:0044596"}


id: PBO:0091767
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mating type M-specific HMG-box DNA-binding transcription factor Mc at silenced MAT3 locus","termid":"PBO:0091767"}


id: PBO:0069497
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 764, pseudogene","termid":"PBO:0069497"}


id: GO:0048015
data:
  {"annotated_genes":["SJAG_00321","SJAG_05330","SJAG_01519","SJAG_04537","SJAG_00114"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[71840,72173,73175,93590,96291],"is_not":false,"summary":null,"term":"GO:0048015"}]},"cv_name":"biological_process","definition":"The series of molecular signals in which a cell uses a phosphatidylinositol-mediated signaling to convert a signal into a response. Phosphatidylinositols include phosphatidylinositol (PtdIns) and its phosphorylated derivatives.","definition_xrefs":["GOC:bf","ISBN:0198506732","GOC:ceb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular signal transduction","termid":"GO:0035556"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00114":null,"SJAG_00321":null,"SJAG_01519":null,"SJAG_04537":null,"SJAG_05330":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"phosphatidylinositol-mediated signaling","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"inositol phospholipid-mediated signaling","type":"broad"},{"name":"phosphatidylinositol-mediated signal transduction","type":"exact"},{"name":"phosphatidylinositol-mediated signalling","type":"exact"},{"name":"phosphoinositide-mediated signaling","type":"exact"},{"name":"phosphoinositide-mediated signalling","type":"exact"}],"termid":"GO:0048015","terms_by_termid":{"GO:0048015":null}}


id: PBO:0003551
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"But2 family protein But2","termid":"PBO:0003551"}


id: PBO:0041337
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 3 open reading frame 20","termid":"PBO:0041337"}


id: PBO:0029154
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_cumene_hydroperoxide","termid":"PBO:0029154"}


id: PBO:0063241
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin alpha 6","termid":"PBO:0063241"}


id: PBO:0056215
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAGE family member B17","termid":"PBO:0056215"}


id: MONDO:1010810
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Polydactyly that occurs in turkey.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bird disease","termid":"MONDO:0024905"},{"relation_name":"is_a","term_name":"polydactyly, non-human animal","termid":"MONDO:1010158"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polydactyly, turkey","secondary_identifiers":["OMIA:000810-9103"],"termid":"MONDO:1010810","xrefs":{"Monarch":{"xref_id":"1010810"}}}


id: MONDO:0003567
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inner ear disorder","termid":"MONDO:0002467"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bilateral hypoactive labyrinth","secondary_identifiers":["MEDGEN:510004","ICD9:386.54","UMLS:C0155518","SCTID:194375009","DOID:565"],"synonyms":[{"name":"hypoactive bilateral labyrinthine dysfunction","type":"exact"},{"name":"hypoactive labyrinth, bilateral","type":"exact"}],"termid":"MONDO:0003567","xrefs":{"Monarch":{"xref_id":"0003567"}}}


id: GO:2000869
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of estrone secretion.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of steroid hormone secretion","termid":"GO:2000833"},{"relation_name":"is_a","term_name":"regulation of estrone secretion","termid":"GO:2000867"},{"relation_name":"positively_regulates","term_name":"estrone secretion","termid":"GO:0035943"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of estrone secretion","synonyms":[{"name":"positive regulation of 3-hydroxy-1,3,5(10)-estratrien-17-one secretion","type":"exact"},{"name":"positive regulation of folliculin secretion","type":"exact"}],"termid":"GO:2000869"}


id: PBO:0017528
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation initiation factor eIF5, Tif5(predicted)","termid":"PBO:0017528"}


id: GO:0002121
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Aggressive behavior based on competition between males of the same species over access to resources such as females, dominance, status, etc. and characterized by noise, threats, and is often less injurious.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aggressive behavior","termid":"GO:0002118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"inter-male aggressive behavior","synonyms":[{"name":"inter-male aggression","type":"exact"}],"termid":"GO:0002121"}


id: GO:0045864
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways involving pteridine.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of metabolic process","termid":"GO:0009893"},{"relation_name":"is_a","term_name":"regulation of pteridine metabolic process","termid":"GO:0042068"},{"relation_name":"positively_regulates","term_name":"pteridine metabolic process","termid":"GO:0019889"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of pteridine metabolic process","synonyms":[{"name":"activation of pteridine metabolic process","type":"narrow"},{"name":"positive regulation of pteridine metabolism","type":"exact"},{"name":"stimulation of pteridine metabolic process","type":"narrow"},{"name":"up regulation of pteridine metabolic process","type":"exact"},{"name":"up-regulation of pteridine metabolic process","type":"exact"},{"name":"upregulation of pteridine metabolic process","type":"exact"}],"termid":"GO:0045864"}


id: PBO:0066819
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 118","termid":"PBO:0066819"}


id: GO:0140276
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any heterochromatin maintenance that is involved in chromatin silencing at or near a centromere.","definition_xrefs":["GOC:vw","GOC:TermGenie","PMID:21289066"],"gene_count":0,"genotype_count":0,"name":"obsolete pericentric heterochromatin maintenance (obsolete GO:0140276)","synonyms":[{"name":"heterochromatin maintenance involved in chromatin silencing at centromere outer repeat region","type":"related"},{"name":"heterochromatin maintenance involved in chromatin silencing at centromeric outer repeats","type":"exact"},{"name":"heterochromatin maintenance involved in chromatin silencing at pericentric region","type":"related"}],"termid":"GO:0140276"}


id: PBO:0028317
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_LTR-derived_RNA_level","termid":"PBO:0028317"}


id: PBO:0085155
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nucleosome remodeling protein; functions in various aspects of transcription, chromatin maintenance, and RNA processing; required for fidelity of promoter selection through maintenance of chromatin structure during transcription in order to inhibit transcription from promoters within coding regions; required for H3K36 trimethylation but not dimethylation by Set2p","termid":"PBO:0085155"}


id: PBO:0063805
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphorylase kinase regulatory subunit beta","termid":"PBO:0063805"}


id: GO:0140662
data:
  {"annotated_genes":["SJAG_01615","SJAG_04511","SJAG_04055","SJAG_01186","SJAG_01664","SJAG_02875","SJAG_03320","SJAG_00447","SJAG_00790","SJAG_03237","SJAG_02378","SJAG_01002","SJAG_01510","SJAG_01874","SJAG_02926","SJAG_00564","SJAG_00609","SJAG_03570","SJAG_04121"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[56955,57905,58070,59247,60136,60307,60462,61634,62550,64571,64878,65229,65447,66576,67231,67367,68016,69414,69858],"is_not":false,"summary":null,"term":"GO:0140662"}]},"cv_name":"molecular_function","definition":"Binding to a protein or a protein-containing complex to assist the protein folding process, driven by ATP hydrolysis.","definition_xrefs":["PMID:27365453"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein folding chaperone","termid":"GO:0044183"},{"relation_name":"is_a","term_name":"ATP-dependent activity","termid":"GO:0140657"}],"gene_count":19,"genes_by_uniquename":{"SJAG_00447":null,"SJAG_00564":null,"SJAG_00609":null,"SJAG_00790":null,"SJAG_01002":null,"SJAG_01186":null,"SJAG_01510":null,"SJAG_01615":null,"SJAG_01664":null,"SJAG_01874":null,"SJAG_02378":null,"SJAG_02875":null,"SJAG_02926":null,"SJAG_03237":null,"SJAG_03320":null,"SJAG_03570":null,"SJAG_04055":null,"SJAG_04121":null,"SJAG_04511":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674"],"is_obsolete":false,"name":"ATP-dependent protein folding chaperone","references_by_uniquename":{"GO_REF:0000002":null},"termid":"GO:0140662","terms_by_termid":{"GO:0140662":null}}


id: GO:0061891
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to and responding, e.g. by conformational change, to changes in the cellular level of calcium ions (Ca2+).","definition_xrefs":["PMID:28151650","PMID:17020874","PMID:16005298"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metal ion sensor activity","termid":"GO:0140784"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140299"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0098772","GO:0140299","GO:0003674"],"is_obsolete":false,"name":"calcium ion sensor activity","termid":"GO:0061891"}


id: PBO:0001426
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis protein Mra1","termid":"PBO:0001426"}


id: GO:0006891
data:
  {"annotated_genes":["SJAG_04569","SJAG_03158","SJAG_04002","SJAG_04474","SJAG_04358","SJAG_03054","SJAG_01415","SJAG_02316","SJAG_02211","SJAG_00330","SJAG_04021","SJAG_01508","SJAG_01071","SJAG_02750","SJAG_03467","SJAG_02234","SJAG_00804","SJAG_01459","SJAG_02525","SJAG_00332","SJAG_01600","SJAG_03663","SJAG_04070","SJAG_04837","SJAG_00041","SJAG_05030","SJAG_02655","SJAG_00192","SJAG_03842","SJAG_00578","SJAG_04739","SJAG_04023"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[57647,70033,70594,70754,71298,71954,73903,75702,76536,77730,78412,78757,79152,80261,89025,96662,97664,98104,98812,100125,100703,102892,103739,105267,107495,109939,110205],"is_not":false,"summary":null,"term":"GO:0006891"},{"annotations":[98454],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048219"},{"annotations":[91512,109876,89325,117218],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000301"}]},"cv_name":"biological_process","definition":"The directed movement of substances within the Golgi, mediated by small transport vesicles. These either fuse with the cis-Golgi or with each other to form the membrane stacks known as the cis-Golgi reticulum (network).","definition_xrefs":["ISBN:0716731363"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Golgi vesicle transport","termid":"GO:0048193"}],"gene_count":32,"genes_by_uniquename":{"SJAG_00041":null,"SJAG_00192":null,"SJAG_00330":null,"SJAG_00332":null,"SJAG_00578":null,"SJAG_00804":null,"SJAG_01071":null,"SJAG_01415":null,"SJAG_01459":null,"SJAG_01508":null,"SJAG_01600":null,"SJAG_02211":null,"SJAG_02234":null,"SJAG_02316":null,"SJAG_02525":null,"SJAG_02655":null,"SJAG_02750":null,"SJAG_03054":null,"SJAG_03158":null,"SJAG_03467":null,"SJAG_03663":null,"SJAG_03842":null,"SJAG_04002":null,"SJAG_04021":null,"SJAG_04023":null,"SJAG_04070":null,"SJAG_04358":null,"SJAG_04474":null,"SJAG_04569":null,"SJAG_04739":null,"SJAG_04837":null,"SJAG_05030":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0008150","GO:0016192","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"intra-Golgi vesicle-mediated transport","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"intra-Golgi transport","type":"exact"}],"termid":"GO:0006891","terms_by_termid":{"GO:0000301":null,"GO:0006891":null,"GO:0048219":null}}


id: PBO:0039053
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"angiogenic factor with G-patch and FHA domains 1 pseudogene 2","termid":"PBO:0039053"}


id: GO:0070189
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving kynurenine, the amino acid 3-(2-aminobenzoyl)-alanine.","definition_xrefs":["CHEBI:28683","GOC:mah","GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ketone metabolic process","termid":"GO:0042180"},{"relation_name":"is_a","term_name":"benzene-containing compound metabolic process","termid":"GO:0042537"},{"relation_name":"is_a","term_name":"non-proteinogenic amino acid metabolic process","termid":"GO:0170041"},{"relation_name":"is_a","term_name":"alpha-amino acid metabolic process","termid":"GO:1901605"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006520"],"is_obsolete":false,"name":"kynurenine metabolic process","synonyms":[{"name":"kynurenine metabolism","type":"exact"}],"termid":"GO:0070189"}


id: PBO:0071648
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36 pseudogene 12","termid":"PBO:0071648"}


id: PBO:0108912
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"STAG1 cohesin complex component","termid":"PBO:0108912"}


id: GO:1901863
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of muscle tissue development.","definition_xrefs":["GOC:yaf","GOC:TermGenie","PMID:23150719"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"regulation of muscle tissue development","termid":"GO:1901861"},{"relation_name":"positively_regulates","term_name":"muscle tissue development","termid":"GO:0060537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of muscle tissue development","synonyms":[{"name":"activation of muscle tissue development","type":"narrow"},{"name":"up regulation of muscle tissue development","type":"exact"},{"name":"up-regulation of muscle tissue development","type":"exact"},{"name":"upregulation of muscle tissue development","type":"exact"}],"termid":"GO:1901863"}


id: FYPO:0004912
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of phytochelatin measured in the vacuole is too low to detect.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phytochelatin absent from cell","termid":"FYPO:0002722"},{"relation_name":"is_a","term_name":"decreased vacuolar phytochelatin level","termid":"FYPO:0004369"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"phytochelatin absent from vacuole","synonyms":[{"name":"cadystin absent from vacuole","type":"exact"},{"name":"phytochelatin absent from vacuole during mitotic cell cycle","type":"related"},{"name":"phytochelatin absent from vacuole during vegetative growth","type":"exact"}],"termid":"FYPO:0004912"}


id: GO:0089721
data:
  {"annotated_genes":["SJAG_00276","SJAG_01960"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[76975,93707],"is_not":false,"summary":null,"term":"GO:0089721"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a phosphoenolpyruvate from one side of a membrane to the other.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid transmembrane transporter activity","termid":"GO:0008028"},{"relation_name":"is_a","term_name":"organophosphate ester transmembrane transporter activity","termid":"GO:0015605"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00276":null,"SJAG_01960":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"phosphoenolpyruvate transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0089721","terms_by_termid":{"GO:0089721":null}}


id: GO:0004720
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: peptidyl-L-lysyl-peptide + H2O + O2 = peptidyl-allysyl-peptide + NH3 + hydrogen peroxide.","definition_xrefs":["EC:1.4.3.13"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diamine oxidase activity","termid":"GO:0052597"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491","GO:0140096"],"is_obsolete":false,"name":"protein-lysine 6-oxidase activity","secondary_identifiers":["MetaCyc:PROTEIN-LYSINE-6-OXIDASE-RXN","Reactome:R-HSA-2002466","GO:0018056","Reactome:R-HSA-2129375","RHEA:24544","Reactome:R-HSA-2395340"],"synonyms":[{"name":"lysyl oxidase activity","type":"related"},{"name":"protein-L-lysine:oxygen 6-oxidoreductase (deaminating)","type":"related"}],"termid":"GO:0004720"}


id: GO:0061174
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Terminal inflated portion of the axon of a glutamatergic neuron, containing the specialized apparatus necessary to release neurotransmitters that will induce the contraction of muscle. The axon terminus is considered to be the whole region of thickening and the terminal bouton is a specialized region of it.","definition_xrefs":["GOC:dph","GOC:mc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terminal bouton","termid":"GO:0043195"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"type I terminal bouton","synonyms":[{"name":"type I terminal button","type":"exact"}],"termid":"GO:0061174"}


id: MONDO:0035682
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete fibrous dysplasia/McCune-Albright syndrome (obsolete MONDO:0035682)","secondary_identifiers":["Orphanet:595216"],"synonyms":[{"name":"FD/MAS spectrum","type":"exact"},{"name":"FD/MAS syndrome","type":"exact"},{"name":"Fibrous dysplasia/McCune-Albright spectrum","type":"exact"}],"termid":"MONDO:0035682","xrefs":{"Monarch":{"xref_id":"0035682"}}}


id: GO:0060819
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Compensating for the two-fold variation in X-chromosome:autosome ratios between sexes by a global inactivation of all, or most of, the genes on one of the X-chromosomes in the XX sex by genomic imprinting.","definition_xrefs":["GOC:sdb_2009","GOC:tb","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete inactivation of X chromosome by genomic imprinting (obsolete GO:0060819)","synonyms":[{"name":"inactivation of X chromosome by genetic imprinting","type":"related"}],"termid":"GO:0060819"}


id: PBO:0069146
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 397, pseudogene","termid":"PBO:0069146"}


id: PBO:0076547
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TatD DNase domain containing 1 pseudogene 1","termid":"PBO:0076547"}


id: MONDO:0006478
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma with poor prognosis that arises from the pancreas. It is characterized by the presence of a significant malignant component that does not show differentiation. The malignant cells represent a mixture of large, pleomorphic cells and giant cells, or adenocarcinoma cells and spindle cells, or spindle cells.","definition_xrefs":["NCIT:C5722"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pancreatic ductal adenocarcinoma","termid":"MONDO:0005184"},{"relation_name":"is_a","term_name":"undifferentiated carcinoma","termid":"MONDO:0005617"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"undifferentiated pancreatic carcinoma","secondary_identifiers":["EFO:1000606","MEDGEN:237030","UMLS:C1336861","ONCOTREE:UCP"],"synonyms":[{"name":"UCP","type":"related"},{"name":"pancreas undifferentiated carcinoma","type":"exact"},{"name":"pancreatic carcinosarcoma","type":"exact"},{"name":"pleomorphic large cell pancreatic carcinoma","type":"exact"},{"name":"sarcomatoid pancreatic carcinoma","type":"exact"},{"name":"spindle cell pancreatic carcinoma","type":"exact"},{"name":"undifferentiated (anaplastic) pancreatic carcinoma","type":"exact"},{"name":"undifferentiated carcinoma of pancreas","type":"exact"},{"name":"undifferentiated carcinoma of the pancreas","type":"exact"},{"name":"undifferentiated pancreatic carcinoma","type":"exact"}],"termid":"MONDO:0006478","xrefs":{"Monarch":{"xref_id":"0006478"}}}


id: PBO:0083472
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified gene RPL12A/YEL054C","termid":"PBO:0083472"}


id: RO:0002589
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"p results in catabolism of c if and only if p is a catabolic process, and the execution of p results in c being broken into smaller parts with energy being released.","direct_ancestors":[{"relation_name":"is_a","term_name":"results_in_breakdown_of","termid":"RO:0002586"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"results_in_catabolism_of","termid":"RO:0002589"}


id: MONDO:0010756
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary von Willebrand disease","termid":"MONDO:0019565"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"Von Willebrand disease, X-linked form","secondary_identifiers":["MEDGEN:333255","UMLS:C1839113","OMIM:314560","MESH:C564041"],"synonyms":[{"name":"Von Willebrand disease, X-linked","type":"related"},{"name":"Von Willebrand disease, X-linked form","type":"exact"}],"termid":"MONDO:0010756","xrefs":{"Monarch":{"xref_id":"0010756"}}}


id: MONDO:0014537
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any nephronophthisis in which the cause of the disease is a mutation in the DCDC2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nephronophthisis","termid":"MONDO:0019005"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005240"],"is_obsolete":false,"name":"nephronophthisis 19","secondary_identifiers":["DOID:0111126","MEDGEN:863979","OMIM:616217","GARD:18081","UMLS:C4015542"],"synonyms":[{"name":"DCDC2 nephronophthisis (disease)","type":"exact"},{"name":"NPHP19","type":"exact"},{"name":"nephronophthisis (disease) caused by mutation in DCDC2","type":"exact"},{"name":"nephronophthisis 19","type":"exact"},{"name":"nephronophthisis type 19","type":"exact"}],"termid":"MONDO:0014537","xrefs":{"Monarch":{"xref_id":"0014537"}}}


id: GO:0048789
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The assembly and arrangement of cytomatrix proteins to form complexes in the cell cortex beneath the active zone, i.e. just beneath the presynaptic plasma membrane.","definition_xrefs":["GOC:jid","PMID:12812759","GOC:ef","GOC:dh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cortical cytoskeleton organization","termid":"GO:0030865"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007010"],"is_obsolete":false,"name":"cytoskeletal matrix organization at active zone","synonyms":[{"name":"cytoskeletal matrix organisation at active zone","type":"exact"}],"termid":"GO:0048789"}


id: GO:0046184
data:
  {"annotated_genes":["SJAG_00252","SJAG_00691","SJAG_00283","SJAG_01543","SJAG_01383","SJAG_04192","SJAG_00707","SJAG_01881"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93184],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036001"},{"annotations":[72493],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046166"},{"annotations":[78510,75596],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009443"},{"annotations":[114776],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042821"},{"annotations":[64291,75863],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042823"},{"annotations":[112208],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010144"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of aldehydes, any organic compound with the formula R-CH=O.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde metabolic process","termid":"GO:0006081"},{"relation_name":"is_a","term_name":"biosynthetic process","termid":"GO:0009058"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00252":null,"SJAG_00283":null,"SJAG_00691":null,"SJAG_00707":null,"SJAG_01383":null,"SJAG_01543":null,"SJAG_01881":null,"SJAG_04192":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"aldehyde biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"aldehyde anabolism","type":"exact"},{"name":"aldehyde biosynthesis","type":"exact"},{"name":"aldehyde formation","type":"exact"},{"name":"aldehyde synthesis","type":"exact"}],"termid":"GO:0046184","terms_by_termid":{"GO:0009443":null,"GO:0010144":null,"GO:0036001":null,"GO:0042821":null,"GO:0042823":null,"GO:0046166":null}}


id: FYPO:0004988
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A gene expression phenotype in which RNA levels that normally vary over the course of the mitotic cell cycle do not vary, or change in a pattern different from normal. Total RNA or a specific RNA, such as the mRNA transcribed from a gene of interest, may be affected.","definition_xrefs":["PMID:15302827","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gene expression regulation phenotype during vegetative growth","termid":"FYPO:0001333"},{"relation_name":"is_a","term_name":"abnormal gene expression","termid":"FYPO:0006551"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0006551","FYPO:0001320"],"is_obsolete":false,"name":"abnormal RNA level oscillation during mitotic cell cycle","synonyms":[{"name":"abnormal RNA level fluctuation during mitotic cell cycle","type":"exact"},{"name":"abnormal periodic expression of RNA during mitotic cell cycle","type":"exact"},{"name":"abnormal transcript level oscillation during mitotic cell cycle","type":"exact"}],"termid":"FYPO:0004988"}


id: PBO:0076595
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TBC1 domain family member 16","termid":"PBO:0076595"}


id: MONDO:0002224
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A cystic cancerous tumor arising from the ovary.","definition_xrefs":["NCIT:C3843"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ovarian cyst","termid":"MONDO:0003282"},{"relation_name":"is_a","term_name":"ovarian cancer","termid":"MONDO:0008170"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"malignant ovarian cyst","secondary_identifiers":["UMLS:C0235770","DOID:2145","MEDGEN:116000"],"synonyms":[{"name":"malignant ovarian cyst","type":"exact"},{"name":"malignant ovarian cyst (disease)","type":"exact"},{"name":"ovarian cyst (disease), malignant","type":"exact"}],"termid":"MONDO:0002224","xrefs":{"Monarch":{"xref_id":"0002224"}}}


id: PBO:0040626
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BANF1 pseudogene 5","termid":"PBO:0040626"}


id: PBO:0079674
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 V2 pseudogene 4","termid":"PBO:0079674"}


id: PBO:0072076
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S12 pseudogene 6","termid":"PBO:0072076"}


id: GO:0006569
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of L-tryptophan, the chiral amino acid 2-amino-3-(1H-indol-3-yl)propanoic acid.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-tryptophan metabolic process","termid":"GO:0006568"},{"relation_name":"is_a","term_name":"aromatic amino acid family catabolic process","termid":"GO:0009074"},{"relation_name":"is_a","term_name":"indole-containing compound catabolic process","termid":"GO:0042436"},{"relation_name":"is_a","term_name":"erythrose 4-phosphate/phosphoenolpyruvate family amino acid catabolic process","termid":"GO:1902222"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0006520","GO:0008150"],"is_obsolete":false,"name":"L-tryptophan catabolic process","secondary_identifiers":["Reactome:R-HSA-71240"],"synonyms":[{"name":"tryptophan breakdown","type":"exact"},{"name":"tryptophan catabolic process","type":"related"},{"name":"tryptophan catabolic process, using tryptophanase","type":"narrow"},{"name":"tryptophan catabolism","type":"exact"},{"name":"tryptophan catabolism, using tryptophanase","type":"narrow"},{"name":"tryptophan degradation","type":"exact"}],"termid":"GO:0006569"}


id: MONDO:0009364
data:
  {"annotated_genes":["SJAG_01491","SJAG_04053","SJAG_04316"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86219,86220,86221],"is_not":false,"summary":null,"term":"MONDO:0009364"}]},"cv_name":"mondo","definition":"An autosomal recessive muscular dystrophy caused by mutations in the POMT1 gene, encoding protein O-mannosyl-transferase 1. It is associated with characteristic brain and eye malformations, profound mental retardation, and early death.","definition_xrefs":["NCIT:C128118"],"direct_ancestors":[{"relation_name":"is_a","term_name":"muscular dystrophy-dystroglycanopathy, type A","termid":"MONDO:0000171"},{"relation_name":"is_a","term_name":"muscle-eye-brain disease","termid":"MONDO:0018939"},{"relation_name":"is_a","term_name":"myopathy caused by variation in POMT1","termid":"MONDO:0700070"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01491":null,"SJAG_04053":null,"SJAG_04316":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0024322"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0024322","MONDO:0005066","MONDO:0002320","MONDO:0005336"],"is_obsolete":false,"name":"muscular dystrophy-dystroglycanopathy (congenital with brain and eye anomalies), type A1","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C4284790","MEDGEN:924974","OMIM:236670","DOID:0111237"],"synonyms":[{"name":"MDDGA1","type":"related"},{"name":"Walker-Warburg syndrome or muscle-eye-brain disease, Pomt1-related","type":"related"},{"name":"cerebroocular dysplasia-muscular dystrophy syndrome","type":"related"},{"name":"cod-MD syndrome","type":"related"},{"name":"hard syndrome","type":"related"},{"name":"hydrocephalus, agyria, and retinal dysplasia","type":"related"},{"name":"muscle-eye-brain-POMT1 related","type":"exact"},{"name":"muscular dystrophy-dystroglycanopathy (congenital with brain and eye anomalies) type A, 1","type":"exact"},{"name":"muscular dystrophy-dystroglycanopathy (congenital with brain and eye anomalies), type A, 1","type":"related"}],"termid":"MONDO:0009364","terms_by_termid":{"MONDO:0009364":null},"xrefs":{"Monarch":{"xref_id":"0009364"}}}


id: MOD:00834
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-serine residue to O3-(N-acetamino)fucosylserine.","definition_xrefs":["PubMed:12010970","RESID:AA0422","PubMed:11342554"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-glycosyl-L-serine","termid":"MOD:00002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"O-(N-acetylamino)fucosyl-L-serine","synonyms":[{"name":"(2S)-2-amino-3-(2-acetamido-2-deoxy-beta-D-fucopyranosyloxy)propanoic acid","type":"exact"},{"name":"CARBOHYD O-linked (FucNAc) serine","type":"exact"},{"name":"O-(2-acetylamino-2-deoxy-beta-D-fucopyranosyl)-L-serine","type":"exact"},{"name":"O-(N-acetylamino)fucosyl-L-serine","type":"exact"},{"name":"O-(N-acetylfucosaminyl)serine","type":"exact"},{"name":"O-seryl-beta-N-acetylfucosaminide","type":"exact"},{"name":"O3-(2-acetamido-2-deoxy-beta-D-fucopyranosyl)-L-serine","type":"exact"},{"name":"O3-(N-acetylfucosaminyl)serine","type":"exact"},{"name":"OFucNAcSer","type":"exact"}],"termid":"MOD:00834"}


id: GO:0110083
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of protein localization to cell division site involved in mitotic actomyosin contractile ring assembly.","definition_xrefs":["GOC:vw","PMID:29343550"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell cycle process","termid":"GO:0090068"},{"relation_name":"is_a","term_name":"regulation of protein localization to cell division site involved in mitotic actomyosin contractile ring assembly","termid":"GO:0110082"},{"relation_name":"is_a","term_name":"positive regulation of protein localization","termid":"GO:1903829"},{"relation_name":"positively_regulates","term_name":"protein localization to cell division site involved in mitotic actomyosin contractile ring assembly","termid":"GO:1903476"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"positively_regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"positive regulation of protein localization to cell division site involved in mitotic actomyosin contractile ring assembly","termid":"GO:0110083"}


id: GO:1904032
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of t-SNARE clustering.","definition_xrefs":["GOC:TermGenie","PMID:22528485","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein localization to membrane","termid":"GO:1905475"},{"relation_name":"regulates","term_name":"t-SNARE clustering","termid":"GO:1990656"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of t-SNARE clustering","termid":"GO:1904032"}


id: FYPO:0008372
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the cell surface is normal (i.e. indistinguishable from wild-type.","definition_xrefs":["PomBase:pb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization during vegetative growth","termid":"FYPO:0000644"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001320","FYPO:0000002","FYPO:0000257","FYPO:0001312"],"is_obsolete":false,"name":"normal protein localization to cell surface during vegetative growth","termid":"FYPO:0008372"}


id: PBO:0071329
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L27 pseudogene 6","termid":"PBO:0071329"}


id: PBO:0011980
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RecA family ATPase Rad57/Rhp57","termid":"PBO:0011980"}


id: PBO:0055468
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2901","termid":"PBO:0055468"}


id: GO:0110068
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: glucosylglycerate + phosphate = glucose-1-phosphate + D-glycerate.","definition_xrefs":["GOC:imk","PMID:28754708"],"direct_ancestors":[{"relation_name":"is_a","term_name":"1,4-alpha-oligoglucan phosphorylase activity","termid":"GO:0004645"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016757","GO:0016740"],"is_obsolete":false,"name":"glucosylglycerate phosphorylase activity","termid":"GO:0110068"}


id: PBO:0077790
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis and ovary specific TOPAZ 1","termid":"PBO:0077790"}


id: PBO:0078606
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 60 pseudogene 19","termid":"PBO:0078606"}


id: FYPO:0006954
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-isoleucine measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased cellular amino acid level","termid":"FYPO:0003986"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"increased cellular isoleucine level","synonyms":[{"name":"increased cellular L-isoleucine level","type":"exact"},{"name":"increased cellular isoleucine level during mitotic cell cycle","type":"related"},{"name":"increased cellular isoleucine level during vegetative growth","type":"exact"},{"name":"increased isoleucine accumulation","type":"related"}],"termid":"FYPO:0006954"}


id: PBO:0089591
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription factor Thi5","termid":"PBO:0089591"}


id: PBO:0071528
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L34 pseudogene 31","termid":"PBO:0071528"}


id: PR:Q9C1X5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAP32A8.02 gene.","definition_xrefs":["UniProtKB:Q9C1X5","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized oxidoreductase P32A8.02 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAP32A8.02","synonyms":[{"name":"Spom972h-SPAP32A8.02","type":"exact"}],"termid":"PR:Q9C1X5"}


id: PBO:0086211
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that binds eIF4G and has a role in repression of translation; has an RGG motif; found in cytoplasmic P bodies; binds to mRNAs under glucose starvation stress, most often in the 5' UTR; found associated with small nucleolar RNAs snR10 and snR11; SBP1 has a paralog, RNP1, that arose from the whole genome duplication","termid":"PBO:0086211"}


id: MONDO:0000096
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete pulmonary surfactant metabolism dysfunction (obsolete MONDO:0000096)","synonyms":[{"name":"SMDP","type":"related"}],"termid":"MONDO:0000096","xrefs":{"Monarch":{"xref_id":"0000096"}}}


id: PBO:0075697
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sterol regulatory element binding transcription factor 2","termid":"PBO:0075697"}


id: MONDO:1012772
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any arthrogryposis multiplex congenita that occurs in cattle due to a mutation in the CHRNB1 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"arthrogryposis multiplex congenita, cattle","termid":"MONDO:1011474"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arthrogryposis multiplex congenita, CHRNB1-related, cattle","secondary_identifiers":["OMIA:002022-9913"],"termid":"MONDO:1012772","xrefs":{"Monarch":{"xref_id":"1012772"}}}


id: MONDO:0018002
data:
  {"annotated_genes":["SJAG_06022"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85495],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014656"}]},"cv_name":"mondo","definition":"Adult-onset chronic progressive external ophthalmoplegia with mitochondrial myopathy is a rare mitochondrial disease characterized by adult onset of progressive external ophthalmoplegia, exercise intolerance, muscle weakness, manifestations of spinocerebellar ataxia (e.g. impaired gait, dysarthria) and mild motor peripheral neuropathy. Respiratory insufficiency has been reported in some cases.","definition_xrefs":["Orphanet:329336"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inborn mitochondrial myopathy","termid":"MONDO:0009637"},{"relation_name":"is_a","term_name":"mitochondrial oxidative phosphorylation disorder","termid":"MONDO:0016387"}],"gene_count":1,"genes_by_uniquename":{"SJAG_06022":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0005336","MONDO:0005066","MONDO:0004069"],"is_obsolete":false,"name":"adult-onset chronic progressive external ophthalmoplegia with mitochondrial myopathy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:725464001","MEDGEN:1393682","GARD:17503","UMLS:C4511138"],"synonyms":[{"name":"adult-onset CPEO with mitochondrial myopathy","type":"exact"}],"termid":"MONDO:0018002","terms_by_termid":{"MONDO:0014656":null},"xrefs":{"Monarch":{"xref_id":"0018002"}}}


id: PBO:0047531
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FYVE, RhoGEF and PH domain containing 5","termid":"PBO:0047531"}


id: PBO:0064743
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 79","termid":"PBO:0064743"}


id: PBO:0076522
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"taste 2 receptor member 33","termid":"PBO:0076522"}


id: PBO:0056432
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MARK2 pseudogene 5","termid":"PBO:0056432"}


id: PBO:0011133
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dihydropteroatesynthase/2-amino-4-hydroxy-6-hydro xymethyldihydropteridinediphosphokinase/dihydroneopterin aldolase (predicted)","termid":"PBO:0011133"}


id: GO:0050522
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of an oxidation-reduction (redox) reaction in which phosphorus or arsenic acts as a hydrogen or electron donor and reduces a known acceptor other than disulfide, NAD or NADP.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete oxidoreductase activity, acting on phosphorus or arsenic in donors, with other known acceptors (obsolete GO:0050522)","termid":"GO:0050522"}


id: MONDO:1011084
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Urolithiasis that occurs in cattle.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"urolithiasis, non-human animal","termid":"MONDO:1010267"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"urolithiasis, cattle","secondary_identifiers":["OMIA:001033-9913"],"termid":"MONDO:1011084","xrefs":{"Monarch":{"xref_id":"1011084"}}}


id: PBO:0051869
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ISL1 divergent transcript","termid":"PBO:0051869"}


id: GO:0016257
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of high-mannose (Man9-Asn) N-glycans by mannosyl-oligosaccharide 1,2-alpha-mannosidase. This may result in Man8GlcNAc2-Asn N-glycans (which in yeast may be subsequently modified by the addition of further mannose residues) or Man5GlcNAc2-Asn N-glycans that are substrates for further diversification in the Golgi apparatus.","definition_xrefs":["ISBN:0879695595"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-glycan processing","termid":"GO:0006491"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"N-glycan processing to secreted and cell-surface N-glycans","termid":"GO:0016257"}


id: GO:0072575
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of epithelial cells, resulting in the expansion of a cell population that contributes to the shaping of the liver.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell proliferation","termid":"GO:0050673"},{"relation_name":"part_of","term_name":"liver morphogenesis","termid":"GO:0072576"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epithelial cell proliferation involved in liver morphogenesis","termid":"GO:0072575"}


id: PBO:0080521
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WASP family homolog 3, pseudogene","termid":"PBO:0080521"}


id: GO:1900333
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of methane biosynthetic process from 3-(methylthio)propionic acid.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of fatty acid metabolic process","termid":"GO:0019217"},{"relation_name":"is_a","term_name":"regulation of sulfur metabolic process","termid":"GO:0042762"},{"relation_name":"is_a","term_name":"regulation of cellular respiration","termid":"GO:0043457"},{"relation_name":"is_a","term_name":"regulation of alkane biosynthetic process","termid":"GO:1901577"},{"relation_name":"regulates","term_name":"methane biosynthetic process from 3-(methylthio)propionic acid","termid":"GO:2001132"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0006790","GO:0006629","GO:0006091","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"regulation of methane biosynthetic process from 3-(methylthio)propionic acid","termid":"GO:1900333"}


id: MONDO:1012483
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"exercise-induced pulmonary hemorrhage, non-human animal","termid":"MONDO:1011704"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exercise-induced pulmonary hemorrhage, horse","secondary_identifiers":["OMIA:001896-9796"],"termid":"MONDO:1012483","xrefs":{"Monarch":{"xref_id":"1012483"}}}


id: GO:0060347
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of creating a trabecula in the heart. A trabecula is a tissue element in the form of a small beam, strut or rod.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trabecula formation","termid":"GO:0060343"},{"relation_name":"part_of","term_name":"cardiac chamber morphogenesis","termid":"GO:0003206"},{"relation_name":"part_of","term_name":"heart trabecula morphogenesis","termid":"GO:0061384"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"heart trabecula formation","synonyms":[{"name":"cardiac trabecula formation","type":"exact"},{"name":"cardiac trabeculation","type":"exact"},{"name":"heart trabecula biogenesis","type":"related"},{"name":"heart trabeculation","type":"exact"}],"termid":"GO:0060347"}


id: GO:0047550
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-hydroxyadipate + NAD+ = 2-oxoadipate + H+ + NADH.","definition_xrefs":["EC:1.1.1.172","RHEA:14793"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"2-oxoadipate reductase activity","secondary_identifiers":["MetaCyc:2-OXOADIPATE-REDUCTASE-RXN","KEGG_REACTION:R01932"],"synonyms":[{"name":"2-hydroxyadipate:NAD+ 2-oxidoreductase activity","type":"related"},{"name":"2-ketoadipate reductase activity","type":"related"},{"name":"alpha-ketoadipate reductase activity","type":"related"}],"termid":"GO:0047550"}


id: SO:0000965
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Structural unit composed of a self-replicating, double-stranded RNA molecule.","definition_xrefs":["SO:ma"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"double","termid":"SO:0000985"},{"relation_name":"is_a","term_name":"RNA_chromosome","termid":"SO:0000961"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double_stranded_RNA_chromosome","synonyms":[{"name":"double stranded RNA chromosome","type":"exact"}],"termid":"SO:0000965"}


id: PBO:0084809
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial protein of unknown function; identified by gene-trapping, microarray-based expression analysis, and genome-wide homology searching","termid":"PBO:0084809"}


id: MONDO:0019093
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Immunodeficiency due to selective anti-polysaccharide antibody deficiency is characterized by normal immunoglobulin levels (including IgG sub-classes) but impaired polysaccharide responsiveness (IPR).","definition_xrefs":["Orphanet:70593"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immunodeficiency disease","termid":"MONDO:0021094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"immunodeficiency due to selective anti-polysaccharide antibody deficiency","secondary_identifiers":["MEDGEN:1747183","icd11.foundation:849949348","SCTID:234556002","UMLS:C5399780","GARD:11903"],"synonyms":[{"name":"specific antibody deficiency","type":"related"}],"termid":"MONDO:0019093","xrefs":{"Monarch":{"xref_id":"0019093"}}}


id: PBO:0004088
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GRIP domain protein","termid":"PBO:0004088"}


id: PBO:0002701
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCR4-Not complex subunit Caf16 (predicted)","termid":"PBO:0002701"}


id: GO:1903777
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to melibiose.","definition_xrefs":["PMID:11471732","GO_REF:0000067","GOC:mr","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disaccharide binding","termid":"GO:0048030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"melibiose binding","termid":"GO:1903777"}


id: GO:0043928
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of the transcript body of a nuclear-transcribed mRNA that occurs when the ends are not protected by the 3'-poly(A) tail.","definition_xrefs":["GOC:mtg_mpo"],"gene_count":0,"genotype_count":0,"name":"obsolete exonucleolytic catabolism of deadenylated mRNA (obsolete GO:0043928)","termid":"GO:0043928"}


id: PBO:0078260
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable C","termid":"PBO:0078260"}


id: GO:0051362
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of a 2-tetrahydropyridinyl-5-imidazolinone protein chromophore cross-link from the alpha-carboxyl carbon of residue n, a lysine, to the alpha-amino nitrogen of residue n+2, a glycine, and a dehydration to form a double bond to the alpha-amino nitrogen of residue n+1. This cross-linking is coupled with a dehydrogenation of residue n+1 to form a double bond between the alpha and beta carbons. In addition, the residue N lysine undergoes cyclization. The alpha-amino nitrogen is replaced by the epsilon-amino nitrogen, the peptide chain is broken, residue N-1 is released as an amide, and a double bond is formed between the alpha-carbon and the nitrogen so that a tetrahydropyridine ring results. This modification is found in the GFP-like fluorescent chromoprotein FP538 from the sea anemone Zoanthus species.","definition_xrefs":["PDB:1XAE","PMID:15628861","RESID:AA0382","PMID:10504696"],"gene_count":0,"genotype_count":0,"name":"obsolete peptide cross-linking via 2-tetrahydropyridinyl-5-imidazolinone glycine (obsolete GO:0051362)","synonyms":[{"name":"biosynthesis of protein-protein cross-link via 2-tetrahydropyridinyl-5-imidazolinone glycine","type":"exact"},{"name":"biosynthetic process of protein-protein cross-link via 2-tetrahydropyridinyl-5-imidazolinone glycine","type":"exact"}],"termid":"GO:0051362"}


id: MONDO:0009261
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"GM1 gangliosidosis type 2 is a clinically variable, infancy or childhood-onset form of GM1 gangliosidosis characterized by normal early development and psychomotor regression between seven months and three years of age.","definition_xrefs":["Orphanet:79256"],"direct_ancestors":[{"relation_name":"is_a","term_name":"GM1 gangliosidosis","termid":"MONDO:0018149"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002561"},{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002525"}],"interesting_parent_ids":["MONDO:0002561","MONDO:0002525","MONDO:0005066","MONDO:0005328"],"is_obsolete":false,"name":"GM1 gangliosidosis type 2","secondary_identifiers":["MEDGEN:120625","UMLS:C0268272","icd11.foundation:1132250614","NANDO:2201197","OMIM:230600","GARD:10126","NANDO:1200068","SCTID:18756002","DOID:0080501"],"synonyms":[{"name":"GM1-gangliosidosis, type 2","type":"related"},{"name":"GM1-gangliosidosis, type II","type":"related"},{"name":"gangliosidosis generalised GM1 juvenile type","type":"related"},{"name":"gangliosidosis generalised GM1 type 2","type":"related"},{"name":"gangliosidosis generalized GM1 juvenile type","type":"related"},{"name":"gangliosidosis generalized GM1 type 2","type":"related"},{"name":"gangliosidosis, generalised GM1, juvenile type","type":"related"},{"name":"gangliosidosis, generalised GM1, late-infantile type","type":"related"},{"name":"gangliosidosis, generalised GM1, type 2","type":"related"},{"name":"gangliosidosis, generalized GM1, juvenile type","type":"related"},{"name":"gangliosidosis, generalized GM1, late-infantile type","type":"related"},{"name":"gangliosidosis, generalized GM1, type 2","type":"related"},{"name":"juvenile GM1 gangliosidosis","type":"exact"},{"name":"late-infantile GM1 gangliosidosis","type":"exact"}],"termid":"MONDO:0009261","xrefs":{"Monarch":{"xref_id":"0009261"}}}


id: PBO:0076387
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translational activator of cytochrome c oxidase I","termid":"PBO:0076387"}


id: PBO:0035863
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_secretion_during_vegetative_growth","termid":"PBO:0035863"}


id: SO:0001363
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"5_aminomethyl_2_thiouridine is a modified uridine base feature.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_uridine","termid":"SO:0001277"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"five_aminomethyl_two_thiouridine","secondary_identifiers":["RNAMOD:071"],"synonyms":[{"name":"5-aminomethyl-2-thiouridine","type":"exact"},{"name":"five aminomethyl two thiouridine","type":"exact"},{"name":"nm5s2U","type":"exact"}],"termid":"SO:0001363"}


id: GO:0006904
data:
  {"annotated_genes":["SJAG_01772","SJAG_03005","SJAG_03499","SJAG_04966","SJAG_02320","SJAG_01697","SJAG_00280","SJAG_02587"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[60353,70185,75468,80178,80552,90940,92696,118601],"is_not":false,"summary":null,"term":"GO:0006904"}]},"cv_name":"biological_process","definition":"The initial attachment of a vesicle membrane to a target membrane, mediated by proteins protruding from the membrane of the vesicle and the target membrane, that contributes to exocytosis.","definition_xrefs":["GOC:bc","PMID:22438915","GOC:aruk","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle docking","termid":"GO:0048278"},{"relation_name":"is_a","term_name":"exocytic process","termid":"GO:0140029"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00280":null,"SJAG_01697":null,"SJAG_01772":null,"SJAG_02320":null,"SJAG_02587":null,"SJAG_03005":null,"SJAG_03499":null,"SJAG_04966":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0140056"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0008150","GO:0016192","GO:0051179","GO:0140056","GO:0006810"],"is_obsolete":false,"name":"vesicle docking involved in exocytosis","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"vesicle docking during exocytosis","type":"related"}],"termid":"GO:0006904","terms_by_termid":{"GO:0006904":null}}


id: PBO:0044790
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defensin alpha 3","termid":"PBO:0044790"}


id: GO:0005763
data:
  {"annotated_genes":["SJAG_04173","SJAG_00944","SJAG_01734","SJAG_02452","SJAG_00060","SJAG_00782","SJAG_01767","SJAG_00889","SJAG_02324","SJAG_02643","SJAG_05320","SJAG_01468","SJAG_04494","SJAG_04281","SJAG_04788","SJAG_02067","SJAG_04378","SJAG_00105","SJAG_04918","SJAG_00628","SJAG_00860","SJAG_03584","SJAG_02777","SJAG_01520","SJAG_02201","SJAG_03053","SJAG_00148","SJAG_03065","SJAG_04164","SJAG_04753","SJAG_00513","SJAG_02359"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[72777,72997,73629,74499,74609,76229,76878,78761,90292,92441,94554,94852,96285,96985,98343,98344,98575,102670,103443,104365,106407,106769,108458,108717,108964,110512,110764,111044,112745,115972,116394,118464],"is_not":false,"summary":null,"term":"GO:0005763"}]},"cv_name":"cellular_component","definition":"The smaller of the two subunits of a mitochondrial ribosome.","definition_xrefs":["GOC:mcc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organellar small ribosomal subunit","termid":"GO:0000314"},{"relation_name":"is_a","term_name":"mitochondrial protein-containing complex","termid":"GO:0098798"},{"relation_name":"part_of","term_name":"mitochondrial ribosome","termid":"GO:0005761"}],"gene_count":32,"genes_by_uniquename":{"SJAG_00060":null,"SJAG_00105":null,"SJAG_00148":null,"SJAG_00513":null,"SJAG_00628":null,"SJAG_00782":null,"SJAG_00860":null,"SJAG_00889":null,"SJAG_00944":null,"SJAG_01468":null,"SJAG_01520":null,"SJAG_01734":null,"SJAG_01767":null,"SJAG_02067":null,"SJAG_02201":null,"SJAG_02324":null,"SJAG_02359":null,"SJAG_02452":null,"SJAG_02643":null,"SJAG_02777":null,"SJAG_03053":null,"SJAG_03065":null,"SJAG_03584":null,"SJAG_04164":null,"SJAG_04173":null,"SJAG_04281":null,"SJAG_04378":null,"SJAG_04494":null,"SJAG_04753":null,"SJAG_04788":null,"SJAG_04918":null,"SJAG_05320":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005739"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0032991","GO:0005739"],"is_obsolete":false,"name":"mitochondrial small ribosomal subunit","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"28S ribosomal subunit, mitochondrial","type":"narrow"},{"name":"mitochondrial ribosomal SSU complex","type":"exact"},{"name":"mitochondrial ribosomal small subunit complex","type":"exact"}],"termid":"GO:0005763","terms_by_termid":{"GO:0005763":null}}


id: PBO:0016104
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor TFIIA complex small subunit Toa2 (predicted)","termid":"PBO:0016104"}


id: MONDO:0019998
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete gastroduodenal malformation (obsolete MONDO:0019998)","secondary_identifiers":["Orphanet:97944"],"termid":"MONDO:0019998","xrefs":{"Monarch":{"xref_id":"0019998"}}}


id: PBO:0047319
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAT atypical cadherin 3","termid":"PBO:0047319"}


id: MONDO:0957912
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inflammatory and toxic neuropathy that is characaterized by a collection of neuropsychological symptoms associated with repeated organophosphate pesticide exposure as well as nerve agent exposure. Symptoms can appear weeks after exposure and include muscle weakness, anxiety, depression, psychosis as well as cognitive and memory deficits.","definition_xrefs":["DOID:0081393"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyneuropathy","termid":"MONDO:0001824"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"organophosphate-induced delayed polyneuropathy","termid":"MONDO:0957912","xrefs":{"Monarch":{"xref_id":"0957912"}}}


id: PBO:0018131
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"guanine deaminase Gud1 (predicted)","termid":"PBO:0018131"}


id: SO:0000801
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A multi-chromosome aberration generated by reassortment of other aberration components; presumed to have a deficiency and a duplication.","definition_xrefs":["FB:gm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"assortment_derived_variation","termid":"SO:0001504"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"assortment_derived_deficiency_plus_duplication","synonyms":[{"name":"assortment derived deficiency plus duplication","type":"exact"}],"termid":"SO:0000801"}


id: PBO:0046440
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epsin 1","termid":"PBO:0046440"}


id: MONDO:0006333
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete ovarian dysgerminoma (obsolete MONDO:0006333)","termid":"MONDO:0006333","xrefs":{"Monarch":{"xref_id":"0006333"}}}


id: PBO:0040643
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL2 associated X, apoptosis regulator","termid":"PBO:0040643"}


id: PBO:0043428
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclic nucleotide gated channel subunit beta 3","termid":"PBO:0043428"}


id: GO:0047665
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-aminolevulinate + pyruvate = 4,5-dioxopentanoate + L-alanine.","definition_xrefs":["EC:2.6.1.43","RHEA:12480"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016769"}],"interesting_parent_ids":["GO:0016769","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"aminolevulinate transaminase activity","secondary_identifiers":["KEGG_REACTION:R02271","MetaCyc:AMINOLEVULINATE-AMINOTRANSFERASE-RXN"],"synonyms":[{"name":"4,5-dioxovalerate aminotransferase activity","type":"related"},{"name":"4,5-dioxovaleric acid aminotransferase activity","type":"related"},{"name":"4,5-dioxovaleric acid transaminase activity","type":"related"},{"name":"4,5-dioxovaleric transaminase activity","type":"related"},{"name":"5-aminolevulinate:pyruvate aminotransferase activity","type":"related"},{"name":"5-aminolevulinic acid transaminase activity","type":"related"},{"name":"DOVA transaminase activity","type":"related"},{"name":"L-alanine-4,5-dioxovalerate aminotransferase activity","type":"related"},{"name":"L-alanine:4,5-dioxovaleric acid transaminase activity","type":"related"},{"name":"L-alanine:dioxovalerate transaminase activity","type":"related"},{"name":"alanine-dioxovalerate aminotransferase activity","type":"related"},{"name":"alanine-gamma,delta-dioxovalerate aminotransferase activity","type":"related"},{"name":"alanine:4,5-dioxovalerate aminotransferase activity","type":"related"},{"name":"aminolevulinate aminotransferase activity","type":"exact"},{"name":"aminolevulinic acid transaminase activity","type":"related"},{"name":"dioxovalerate transaminase activity","type":"related"},{"name":"gamma,delta-dioxovalerate aminotransferase activity","type":"related"},{"name":"gamma,delta-dioxovaleric acid transaminase activity","type":"related"}],"termid":"GO:0047665"}


id: PBO:0067818
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 120","termid":"PBO:0067818"}


id: PBO:0109613
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NHS like 3","termid":"PBO:0109613"}


id: PBO:0029910
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cellular_sterol_level","termid":"PBO:0029910"}


id: GO:1903398
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of m7G(5')pppN diphosphatase activity.","definition_xrefs":["GOC:TermGenie","PMID:22323607","GO_REF:0000059"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of m7G(5')pppN diphosphatase activity (obsolete GO:1903398)","synonyms":[{"name":"regulation of 7-methylguanosine-5'-triphospho-5'-polynucleotide 7-methylguanosine-5'-phosphohydrolase activity","type":"exact"},{"name":"regulation of M(7)G(5')pppN pyrophosphatase activity","type":"exact"},{"name":"regulation of decapase activity","type":"related"},{"name":"regulation of m7G(5')pppN pyrophosphatase activity","type":"exact"}],"termid":"GO:1903398"}


id: MOD:01884
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom with a 4-aminobutyl group, usually derived from spermidine.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alkylated residue","termid":"MOD:00001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4-aminobutylated residue","termid":"MOD:01884"}


id: PBO:0113515
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UbiB protein kinase-like family member; mitochondrial inner membrane protein that interacts with outer membrane proteins Por1p and Om14p to form a MICOS-independent mitochondrial contact site; role in mitochondrial organization; contributes to mitochondrial lipid homeostasis; controls the cellular distribution of coenzyme Q (CoQ); contains a potential mitochondrial targeting sequence and predicted transmembrane domain","termid":"PBO:0113515"}


id: GO:0050518
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-C-methyl-D-erythritol 4-phosphate + CTP = 4-CDP-2-C-methyl-D-erythritol + diphosphate.","definition_xrefs":["EC:2.7.7.60","RHEA:13429"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytidylyltransferase activity","termid":"GO:0070567"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0016779","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity","secondary_identifiers":["KEGG_REACTION:R05633","MetaCyc:2.7.7.60-RXN","GO:0008699"],"synonyms":[{"name":"4-diphosphocytidyl-2-C-methyl-D-erythritol synthase activity","type":"related"},{"name":"4-diphosphocytidyl-2C-methyl-D-erythritol synthase activity","type":"exact"},{"name":"CTP:2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity","type":"exact"},{"name":"MCT activity","type":"related"},{"name":"MEP cytidylyltransferase activity","type":"exact"}],"termid":"GO:0050518"}


id: GO:1990732
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A non-membrane-bounded organelle found within the chloroplasts of algae and hornworts; responsible for carbon dioxide fixation.","definition_xrefs":["PMID:23345319","GOC:cjm","GOC:pr","Wikipedia:Pyrenoid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular membraneless organelle","termid":"GO:0043232"},{"relation_name":"part_of","term_name":"plastid","termid":"GO:0009536"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"pyrenoid","termid":"GO:1990732"}


id: PBO:0066978
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 281","termid":"PBO:0066978"}


id: PBO:0041218
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1","termid":"PBO:0041218"}


id: PR:Q10348
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An endonuclease V that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01577","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endonuclease C1F12.06c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1F12.06c","secondary_identifiers":["UniProtKB:Q10348"],"synonyms":[{"name":"Spom972h-ENDOV","type":"exact"}],"termid":"PR:Q10348"}


id: GO:1900992
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving (-)-secologanin.","definition_xrefs":["UniPathway:UPA00328","GOC:TermGenie","GOC:yaf"],"gene_count":0,"genotype_count":0,"name":"obsolete (-)-secologanin metabolic process (obsolete GO:1900992)","synonyms":[{"name":"(-)-secologanin metabolism","type":"exact"}],"termid":"GO:1900992"}


id: PBO:0082119
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Acetylornithine aminotransferase; catalyzes the fourth step in the biosynthesis of the arginine precursor ornithine","termid":"PBO:0082119"}


id: MONDO:0013413
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any retinitis pigmentosa in which the cause of the disease is a mutation in the CNGB1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinitis pigmentosa","termid":"MONDO:0019200"},{"relation_name":"is_a","term_name":"CNGB1-related retinopathy","termid":"MONDO:0800403"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0005066","MONDO:0004736"],"is_obsolete":false,"name":"retinitis pigmentosa 45","secondary_identifiers":["ICD10CM:H35.5","MEDGEN:462416","DOID:0110402","GARD:15704","OMIM:613767","UMLS:C3151066"],"synonyms":[{"name":"CNGB1 retinitis pigmentosa","type":"exact"},{"name":"RP45","type":"exact"},{"name":"retinitis pigmentosa 45","type":"exact"},{"name":"retinitis pigmentosa caused by mutation in CNGB1","type":"exact"},{"name":"retinitis pigmentosa type 45","type":"exact"}],"termid":"MONDO:0013413","xrefs":{"Monarch":{"xref_id":"0013413"}}}


id: PBO:0002743
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human AMSH/STAMBP protein homolog, ubiquitin specific-protease","termid":"PBO:0002743"}


id: MONDO:0016717
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An intraventricular papillary neoplasm that originates from the choroid plexus epithelium. It includes the choroid plexus papilloma, atypical choroid plexus papilloma, and choroid plexus carcinoma.","definition_xrefs":["NCIT:C3473"],"direct_ancestors":[{"relation_name":"is_a","term_name":"brain neoplasm","termid":"MONDO:0021211"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"choroid plexus neoplasm","secondary_identifiers":["MONDO:0021226","GARD:20722","icd11.foundation:1959912502","SCTID:254942002","UMLS:C0085138","Orphanet:251896","MEDGEN:38980","ONCOTREE:CPT"],"synonyms":[{"name":"choroid plexus neoplasm","type":"exact"},{"name":"choroid plexus tumor","type":"exact"},{"name":"choroid plexus tumour","type":"exact"},{"name":"neoplasm of choroid plexus","type":"exact"},{"name":"neoplasm of the choroid plexus","type":"exact"},{"name":"tumor of choroid plexus","type":"exact"},{"name":"tumor of the choroid plexus","type":"exact"},{"name":"tumour of choroid plexus","type":"exact"},{"name":"tumour of the choroid plexus","type":"exact"}],"termid":"MONDO:0016717","xrefs":{"Monarch":{"xref_id":"0016717"}}}


id: PBO:0110825
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription factor, sexual differentiation inducing Esc1","termid":"PBO:0110825"}


id: GO:0008965
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: phosphoenolpyruvate + protein L-histidine = pyruvate + protein N(pi)-phospho-L-histidine.","definition_xrefs":["EC:2.7.3.9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, nitrogenous group as acceptor","termid":"GO:0016775"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"phosphoenolpyruvate-protein phosphotransferase activity","secondary_identifiers":["MetaCyc:2.7.3.9-RXN","RHEA:23880"],"synonyms":[{"name":"enzyme I of the phosphotransferase system","type":"narrow"},{"name":"phosphoenolpyruvate sugar phosphotransferase enzyme I activity","type":"related"},{"name":"phosphoenolpyruvate--protein phosphatase activity","type":"related"},{"name":"phosphoenolpyruvate:protein-L-histidine N-pros-phosphotransferase activity","type":"related"},{"name":"phosphoenolpyruvate:protein-L-histidine Npi-phosphotransferase activity","type":"related"},{"name":"phosphopyruvate--protein factor phosphotransferase activity","type":"related"},{"name":"phosphopyruvate--protein phosphotransferase activity","type":"related"},{"name":"sugar--PEP phosphotransferase enzyme I activity","type":"narrow"}],"termid":"GO:0008965"}


id: PBO:0069840
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1126, pseudogene","termid":"PBO:0069840"}


id: PR:O14350
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- swi3 gene.","definition_xrefs":["UniProtKB:O14350","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"swi1-interacting protein swi3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC30D10.04","synonyms":[{"name":"Spom972h-swi3","type":"exact"},{"name":"replication fork protection complex subunit swi3 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14350"}


id: GO:0047256
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a beta-D-Gal-(1->4)-beta-D-Glc-(1<->1)-Cer(d18:1(4E)) + UDP-N-acetyl-alpha-D-glucosamine = a beta-D-GlcNAc-(1->3)-beta-D-Gal-(1->4)-beta-D-Glc-(1<->1)-Cer(d18:1(4E)) + H+ + UDP.","definition_xrefs":["RHEA:13905"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetylglucosaminyltransferase activity","termid":"GO:0008375"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0016757","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"lactosylceramide 1,3-N-acetyl-beta-D-glucosaminyltransferase activity","secondary_identifiers":["Reactome:R-HSA-9846501","EC:2.4.1.206","MetaCyc:2.4.1.206-RXN"],"synonyms":[{"name":"LA2 synthase activity","type":"related"},{"name":"UDP-N-acetyl-D-glucosamine:D-galactosyl-1,4-beta-D-glucosylceramide beta-1,3-acetylglucosaminyltransferase activity","type":"related"},{"name":"beta1->3-N-acetylglucosaminyltransferase activity","type":"related"},{"name":"lactosylceramide beta-acetylglucosaminyltransferase activity","type":"related"},{"name":"uridine diphosphoacetylglucosamine-lactosylceramide beta-acetylglucosaminyltransferase activity","type":"related"}],"termid":"GO:0047256"}


id: PBO:0029191
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-excess_intracellular_endomembrane_system_present","termid":"PBO:0029191"}


id: PBO:0059806
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CYB pseudogene 32","termid":"PBO:0059806"}


id: MONDO:0000579
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete coronin-1A deficiency (obsolete MONDO:0000579)","termid":"MONDO:0000579","xrefs":{"Monarch":{"xref_id":"0000579"}}}


id: GO:0051130
data:
  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id: PBO:0018232
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id: PBO:0049654
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id: GO:0098901
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of action potential creation, propagation or termination in a cardiac muscle cell. This typically occurs via modulation of the activity or expression of voltage-gated ion channels.","definition_xrefs":["GOC:mtg_cardiac_conduct_nov11","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of action potential","termid":"GO:0098900"},{"relation_name":"regulates","term_name":"cardiac muscle cell action potential","termid":"GO:0086001"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cardiac muscle cell action potential","termid":"GO:0098901"}


id: GO:0051660
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id: MONDO:0100102
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any fetal akinesia deformation sequence in which the cause of the disease is a mutation in the RAPSN gene.","definition_xrefs":["OMIM:618388"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fetal akinesia deformation sequence","termid":"MONDO:0008824"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fetal akinesia deformation sequence 2","secondary_identifiers":["GARD:16495","MEDGEN:1678048","UMLS:C4760576","DOID:0111378"],"synonyms":[{"name":"FADS2","type":"exact"}],"termid":"MONDO:0100102","xrefs":{"Monarch":{"xref_id":"0100102"}}}


id: GO:1905365
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id: PBO:0083814
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id: MONDO:0015762
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id: GO:0072348
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id: PR:Q8TFG4
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id: PBO:0052887
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id: MONDO:0004571
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id: MONDO:0009623
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id: PR:O74865
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id: PBO:0030160
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  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_chromatin_during_vegetative_growth","termid":"PBO:0030160"}


id: GO:0102404
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: linalyl 6-O-alpha-L-arabinopyranosyl- beta-D-glucopyranoside + H2O = vicianose + linalool.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete linalyl 6-O-alpha-L-arabinopyranosyl-beta-D-glucopyranoside glucosidase (Yabukita) activity (obsolete GO:0102404)","termid":"GO:0102404"}


id: FYPO:0005200
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cell morphology phenotype in which a vegetative cell is inviable and elongated during a cellular response to ultraviolet light.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete inviable elongated vegetative cell during cellular response to UV (obsolete FYPO:0005200)","synonyms":[{"name":"elongated inviable cell during cellular response to UV during vegetative growth","type":"exact"},{"name":"elongated inviable vegetative cell during cellular response to UV","type":"exact"},{"name":"inviable elongated vegetative cell during cellular response to UV during mitotic cell cycle","type":"related"},{"name":"inviable elongated vegetative cell during cellular response to ultraviolet light","type":"exact"},{"name":"lethal; elongated vegetative cell during cellular response to UV","type":"exact"}],"termid":"FYPO:0005200"}


id: MONDO:0017705
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenital pulmonary venous return anomaly is a cardiac malformation where some or all of the pulmonary veins drain into the right atrium or the systemic veins, with or without the presence of pulmonary venous obstruction, leading to various manifestations such as fatigue, exertional dyspnea, pulmonary arterial hypertension, cyanosis and progressive congestive heart failure. The two main subtypes are congenital partial pulmonary venous return anomaly (PAPVC), where one or a few of the pulmonary veins are anomalous, and congenital total pulmonary venous return anomaly (TAPVC), where all of the pulmonary veins are anomalous.","definition_xrefs":["Orphanet:3090"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital pulmonary veins anomaly","termid":"MONDO:0020295"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"congenital pulmonary venous return anomaly","secondary_identifiers":["UMLS:C0265916","GARD:4599","MEDGEN:539577"],"synonyms":[{"name":"APVR","type":"related"},{"name":"TAPVR","type":"related"},{"name":"TAPVR1","type":"related"},{"name":"anomalous pulmonary venous return","type":"related"},{"name":"congenital pulmonary venous connection anomaly","type":"exact"},{"name":"pulmonary venous return anomaly","type":"related"},{"name":"scimitar anomaly","type":"related"},{"name":"scimitar syndrome","type":"related"},{"name":"total anomalous pulmonary venous return","type":"related"}],"termid":"MONDO:0017705","xrefs":{"Monarch":{"xref_id":"0017705"}}}


id: PBO:0059138
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MPHOSPH10 pseudogene 5","termid":"PBO:0059138"}


id: FYPO:0000674
data:
  {"alleles_by_uniquename":{"SJAG_01946:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01946","name":"cem1delta","uniquename":"SJAG_01946:allele-1"},"SJAG_03198:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03198","name":"oar2delta","uniquename":"SJAG_03198:allele-1"},"SJAG_03198:allele-2":{"allele_type":"amino_acid_mutation","description":"Y189D cold sensitive","gene_uniquename":"SJAG_03198","name":"oar2-51","uniquename":"SJAG_03198:allele-2"},"SJAG_03198:allele-3":{"allele_type":"amino_acid_mutation","description":"R72A,L75A,R106A,L109A","gene_uniquename":"SJAG_03198","name":"oar2-dm12","synonyms":[{"name":"destruction box mutations","reference":"PMID:23786411","type":"exact"}],"uniquename":"SJAG_03198:allele-3"},"SJAG_03575:allele-1":{"allele_type":"amino_acid_mutation","description":"E548K ts","gene_uniquename":"SJAG_03575","name":"apc2-361","uniquename":"SJAG_03575:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[119887,119888,119889,119891],"is_not":false,"summary":null,"term":"FYPO:0000674"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell population growth phenotype in which vegetative cells grow normally (i.e. indistinguishably from wild type) at a high temperature.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01946":null,"SJAG_03198":null,"SJAG_03575":null},"genotype_count":4,"genotypes_by_uniquename":{"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type__cem1delta":{"display_name":"apc2-361(E548K ts) cem1delta","display_uniquename":"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type__cem1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03575:allele-1","expression":"Not assayed or wild type"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_01946:allele-1","expression":"Null"}]}]},"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type__oar2-51-Y189D_cold_sensitive-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"apc2-361(E548K ts) oar2-51(Y189D cold sensitive)","display_uniquename":"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type__oar2-51-Y189D_cold_sensitive-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03575:allele-1","expression":"Not assayed or wild type"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03198:allele-2","expression":"Not assayed or wild type"}]}]},"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type__oar2-dm12-R72A,L75A,R106A,L109A-amino_acid_mutation-expression-overexpression":{"display_name":"apc2-361(E548K ts) oar2-dm12(R72A,L75A,R106A,L109A aa)[Overexpression]","display_uniquename":"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type__oar2-dm12-R72A,L75A,R106A,L109A-amino_acid_mutation-expression-overexpression","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03575:allele-1","expression":"Not assayed or wild type"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03198:allele-3","expression":"Overexpression"}]}]},"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type__oar2delta":{"display_name":"apc2-361(E548K ts) oar2delta","display_uniquename":"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type__oar2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03575:allele-1","expression":"Not assayed or wild type"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03198:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0000003","FYPO:0000139","FYPO:0002060","FYPO:0000257","FYPO:0002058"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_03198","SJAG_01946","SJAG_03575"],"name":"normal cell population growth at high temperature","references_by_uniquename":{"PMID:23786411":null},"synonyms":[{"name":"heat sensitivity: normal","type":"related"},{"name":"normal growth at high temperature","type":"broad"},{"name":"normal vegetative cell population growth at high temperature","type":"exact"}],"termid":"FYPO:0000674","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000137":null,"FYPO:0000674":null}}


id: GO:1904514
data:
  {"annotated_genes":["SJAG_03048","SJAG_03438","SJAG_00364","SJAG_03720"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89423,102735,106993,116615],"is_not":false,"summary":null,"term":"GO:1904514"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of initiation of premeiotic DNA replication.","definition_xrefs":["PMID:25891897","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of nuclear cell cycle DNA replication","termid":"GO:0010571"},{"relation_name":"is_a","term_name":"positive regulation of DNA-templated DNA replication initiation","termid":"GO:0032298"},{"relation_name":"is_a","term_name":"regulation of initiation of premeiotic DNA replication","termid":"GO:1904512"},{"relation_name":"is_a","term_name":"positive regulation of reproductive process","termid":"GO:2000243"},{"relation_name":"positively_regulates","term_name":"meiotic DNA replication initiation","termid":"GO:1902974"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00364":null,"SJAG_03048":null,"SJAG_03438":null,"SJAG_03720":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"positively_regulates","termid":"GO:0006260"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0006260"},{"rel_name":"positively_regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0006260","GO:0006259","GO:0007049","GO:0008150"],"is_obsolete":false,"name":"positive regulation of initiation of premeiotic DNA replication","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of initiation of meiotic DNA synthesis","type":"related"},{"name":"activation of initiation of premeiotic DNA replication","type":"narrow"},{"name":"activation of initiation of premeiotic DNA synthesis","type":"related"},{"name":"activation of meiotic DNA replication initiation","type":"related"},{"name":"activation of premeiotic DNA replication initiation","type":"narrow"},{"name":"positive regulation of initiation of meiotic DNA synthesis","type":"related"},{"name":"positive regulation of initiation of premeiotic DNA synthesis","type":"related"},{"name":"positive regulation of meiotic DNA replication initiation","type":"related"},{"name":"positive regulation of premeiotic DNA replication initiation","type":"exact"},{"name":"up regulation of initiation of meiotic DNA synthesis","type":"related"},{"name":"up regulation of initiation of premeiotic DNA replication","type":"exact"},{"name":"up regulation of initiation of premeiotic DNA synthesis","type":"related"},{"name":"up regulation of meiotic DNA replication initiation","type":"related"},{"name":"up regulation of premeiotic DNA replication initiation","type":"exact"},{"name":"up-regulation of initiation of meiotic DNA synthesis","type":"related"},{"name":"up-regulation of initiation of premeiotic DNA replication","type":"exact"},{"name":"up-regulation of initiation of premeiotic DNA synthesis","type":"related"},{"name":"up-regulation of meiotic DNA replication initiation","type":"related"},{"name":"up-regulation of premeiotic DNA replication initiation","type":"exact"},{"name":"upregulation of initiation of meiotic DNA synthesis","type":"related"},{"name":"upregulation of initiation of premeiotic DNA replication","type":"exact"},{"name":"upregulation of initiation of premeiotic DNA synthesis","type":"related"},{"name":"upregulation of meiotic DNA replication initiation","type":"related"},{"name":"upregulation of premeiotic DNA replication initiation","type":"exact"}],"termid":"GO:1904514","terms_by_termid":{"GO:1904514":null}}


id: GO:0046539
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine(1+) + histamine = N(tau)-methylhistamine + S-adenosyl-L-homocysteine + H+.","definition_xrefs":["RHEA:19301","EC:2.1.1.8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-methyltransferase activity","termid":"GO:0008170"},{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016741","GO:0016740"],"is_obsolete":false,"name":"histamine N-methyltransferase activity","secondary_identifiers":["Reactome:R-HSA-175993","KEGG_REACTION:R02155","MetaCyc:HISTAMINE-N-METHYLTRANSFERASE-RXN"],"synonyms":[{"name":"S-adenosyl-L-methionine:histamine N-tele-methyltransferase activity","type":"related"},{"name":"S-adenosylmethionine-histamine N-methyltransferase activity","type":"related"},{"name":"histamine 1-methyltransferase activity","type":"related"},{"name":"histamine methyltransferase activity","type":"related"},{"name":"histamine-methylating enzyme","type":"related"},{"name":"imidazolemethyltransferase activity","type":"related"}],"termid":"GO:0046539"}


id: GO:2000805
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of termination of RNA polymerase II transcription, poly(A)-coupled.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of termination of RNA polymerase II transcription","termid":"GO:0120191"},{"relation_name":"is_a","term_name":"regulation of termination of RNA polymerase II transcription, poly(A)-coupled","termid":"GO:2000804"},{"relation_name":"negatively_regulates","term_name":"termination of RNA polymerase II transcription, poly(A)-coupled","termid":"GO:0030846"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0006351"}],"interesting_parent_ids":["GO:0008150","GO:0006351","GO:0006355","GO:0010467"],"is_obsolete":false,"name":"negative regulation of termination of RNA polymerase II transcription, poly(A)-coupled","synonyms":[{"name":"negative regulation of termination of RNA polymerase II transcription, polyadenylation-coupled","type":"related"},{"name":"negative regulation of transcription termination from Pol II promoter, RNA polymerase(A) coupled","type":"related"},{"name":"negative regulation of transcription termination from Pol II promoter, poly(A) coupled","type":"related"}],"termid":"GO:2000805"}


id: PBO:0053508
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 492","termid":"PBO:0053508"}


id: GO:1902756
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of sulfurated eukaryotic molybdenum cofactor(2-).","definition_xrefs":["GOC:dph","GOC:TermGenie","PMID:18258600","GO_REF:0000068"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biosynthetic process","termid":"GO:0009058"},{"relation_name":"is_a","term_name":"sulfurated eukaryotic molybdenum cofactor(2-) metabolic process","termid":"GO:1902755"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sulfurated eukaryotic molybdenum cofactor(2-) biosynthetic process","secondary_identifiers":["MetaCyc:PWY-5963"],"synonyms":[{"name":"sulfurated eukaryotic molybdenum cofactor(2-) anabolism","type":"exact"},{"name":"sulfurated eukaryotic molybdenum cofactor(2-) biosynthesis","type":"exact"},{"name":"sulfurated eukaryotic molybdenum cofactor(2-) formation","type":"exact"},{"name":"sulfurated eukaryotic molybdenum cofactor(2-) synthesis","type":"exact"}],"termid":"GO:1902756"}


id: PBO:0000653
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA replication factor C complex subunit Rfc4 (predicted)","termid":"PBO:0000653"}


id: MONDO:0001570
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete locked-in syndrome (obsolete MONDO:0001570)","termid":"MONDO:0001570","xrefs":{"Monarch":{"xref_id":"0001570"}}}


id: GO:0051969
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of transmission of a nerve impulse, the sequential electrochemical polarization and depolarization that travels across the membrane of a neuron in response to stimulation.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell communication","termid":"GO:0010646"},{"relation_name":"is_a","term_name":"regulation of nervous system process","termid":"GO:0031644"},{"relation_name":"regulates","term_name":"transmission of nerve impulse","termid":"GO:0019226"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of transmission of nerve impulse","synonyms":[{"name":"regulation of conduction of nerve impulse","type":"exact"}],"termid":"GO:0051969"}


id: FYPO:0008145
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of  heme O measured in a cell is lower than normal.","definition_xrefs":["PMID:11248251"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased level of substance in cell","termid":"FYPO:0000991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased level of heme O in cell","synonyms":[{"name":"decreased heme O level","type":"exact"}],"termid":"FYPO:0008145"}


id: GO:0016147
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: GTP + H2O = GDP + phosphate.","definition_xrefs":["EC:3.6.1.48"],"gene_count":0,"genotype_count":0,"name":"obsolete protein-synthesizing GTPase activity, elongation (obsolete GO:0016147)","synonyms":[{"name":"protein-synthesizing GTPase activity, elongation","type":"exact"}],"termid":"GO:0016147"}


id: MONDO:0006324
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A biologic subset of breast carcinoma defined by high expression of many genes expressed by adipose and other non-epithelial tissues.","definition_xrefs":["NCIT:C53557"],"direct_ancestors":[{"relation_name":"is_a","term_name":"breast carcinoma by gene expression profile","termid":"MONDO:0006116"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"normal breast-like subtype of breast carcinoma","secondary_identifiers":["MEDGEN:771111","EFO:1000402","UMLS:C3642471"],"synonyms":[{"name":"normal breast-like subtype of breast cancer","type":"exact"},{"name":"normal breast-like subtype of breast carcinoma","type":"exact"}],"termid":"MONDO:0006324","xrefs":{"Monarch":{"xref_id":"0006324"}}}


id: PBO:0031715
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_mitochondrial_transport","termid":"PBO:0031715"}


id: PBO:0077209
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane 7 superfamily member 3","termid":"PBO:0077209"}


id: PBO:0085848
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the endoplasmic reticulum; protein abundance increases in response to DNA replication stress","termid":"PBO:0085848"}


id: MONDO:0012234
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete LFS3 (obsolete MONDO:0012234)","termid":"MONDO:0012234","xrefs":{"Monarch":{"xref_id":"0012234"}}}


id: MOD:01009
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-proline residue","termid":"MOD:00915"},{"relation_name":"is_a","term_name":"didehydrogenated residue","termid":"MOD:01888"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dehydrogenated proline","termid":"MOD:01009"}


id: SO:0001738
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of the H4 histone whereby multiple lysines are acylated.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone_acylation_region","termid":"SO:0001737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"H4K_acylation_region","synonyms":[{"name":"H4K acylation region","type":"exact"},{"name":"H4KAc","type":"related"}],"termid":"SO:0001738"}


id: PBO:0061851
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactomedin 1","termid":"PBO:0061851"}


id: PBO:0028458
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_localization_to_septum","termid":"PBO:0028458"}


id: PBO:0060001
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4L pseudogene 21","termid":"PBO:0060001"}


id: PBO:0003362
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi transport complex subunit Cog2 (predicted)","termid":"PBO:0003362"}


id: GO:0034481
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3'-phosphoadenosine 5'-phosphosulfate + chondroitin = adenosine 3',5'-bisphosphate + chondroitin sulfate.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proteoglycan sulfotransferase activity","termid":"GO:0050698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016782","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"chondroitin sulfotransferase activity","termid":"GO:0034481"}


id: PBO:0061668
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin 50 pseudogene 1","termid":"PBO:0061668"}


id: GO:0050376
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-glucosamine = UDP-galactosamine.","definition_xrefs":["EC:5.1.3.16","MetaCyc:UDP-GLUCOSAMINE-EPIMERASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"racemase and epimerase activity, acting on carbohydrates and derivatives","termid":"GO:0016857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0016853","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"UDP-glucosamine 4-epimerase activity","secondary_identifiers":["RHEA:23492"],"synonyms":[{"name":"UDP-glucosamine epimerase activity","type":"exact"},{"name":"UDPglucosamine 4-epimerase activity","type":"related"}],"termid":"GO:0050376"}


id: PBO:0041212
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C1D nuclear receptor corepressor","termid":"PBO:0041212"}


id: MONDO:0022754
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A cytogenetic abnormality that refers to the allelic loss of all or part of the short arm of chromosome 17.","definition_xrefs":["NCIT:C36499"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"Smith-Magenis syndrome","termid":"MONDO:0008434"},{"relation_name":"is_a","term_name":"partial deletion of chromosome 17","termid":"MONDO:0016879"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 17p deletion","secondary_identifiers":["GARD:20817","Orphanet:261965","UMLS:C5679671","MEDGEN:1842221","MESH:C538045","icd11.foundation:527787991"],"synonyms":[{"name":"17p deletion","type":"related"},{"name":"17p monosomy","type":"related"},{"name":"17p- syndrome","type":"related"},{"name":"chromosome 17p deletion","type":"exact"},{"name":"chromosome 17p deletion syndrome","type":"related"},{"name":"del(17p)","type":"related"},{"name":"deletion 17p","type":"related"},{"name":"deletion 17p syndrome","type":"related"},{"name":"interstitial deletion 17p","type":"related"},{"name":"loss of chromosome 17p","type":"related"},{"name":"monosomy 17p","type":"related"},{"name":"partial deletion of chromosome 17p","type":"exact"},{"name":"partial deletion of the short arm of chromosome 17","type":"exact"},{"name":"partial monosomy 17p","type":"related"},{"name":"partial monosomy of chromosome 17p","type":"exact"},{"name":"partial monosomy of the short arm of chromosome 17","type":"exact"},{"name":"partial monosomy of the short arm of chromosome type 17","type":"exact"}],"termid":"MONDO:0022754","xrefs":{"Monarch":{"xref_id":"0022754"}}}


id: PBO:0084457
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mannosyltransferase in the N-linked glycosylation pathway; catalyzes two consecutive steps in N-linked glycosylation pathway; mutants exhibit temperature-sensitive growth and abnormal accumulation of lipid-linked oligosaccharide Man2GlcNAc2-PP-Dol; mutations of human ALG2 cause congenital myasthenic syndrome; human ALG2 complements temperature sensitivity and dolichol-linked oligosaccharide biosynthesis defect of alg2-1 mutant, but mutant form from a patient with CDG-Ii fails to complement","termid":"PBO:0084457"}


id: PBO:0031360
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_amphotericin_B","termid":"PBO:0031360"}


id: GO:0030448
data:
  {"annotated_genes":["SJAG_00124","SJAG_04312"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[119694,119695],"is_not":false,"summary":null,"term":"GO:0030448"}]},"cv_name":"biological_process","definition":"Growth of fungi as threadlike, tubular structures that may contain multiple nuclei and may or may not be divided internally by septa, or cross-walls.","definition_xrefs":["GOC:mcc","ISBN:0471522295"],"direct_ancestors":[{"relation_name":"is_a","term_name":"filamentous growth","termid":"GO:0030447"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00124":null,"SJAG_04312":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hyphal growth","references_by_uniquename":{"PMID:34427722":null},"secondary_identifiers":["GO:0075061"],"synonyms":[{"name":"formation of symbiont invasive hypha in host","type":"exact"},{"name":"formation of symbiont invasive hypha within host","type":"exact"},{"name":"formation of symbiont invasive hypha within host during symbiotic interaction","type":"exact"},{"name":"invasive hyphal growth","type":"exact"},{"name":"symbiont invasive hypha formation within host","type":"exact"}],"termid":"GO:0030448","terms_by_termid":{"GO:0030448":null}}


id: GO:0070156
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of coupling phenylalanine to phenylalanyl-tRNA in a mitochondrion, catalyzed by phenylalanyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA.","definition_xrefs":["GOC:mah","GOC:mcc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenylalanyl-tRNA aminoacylation","termid":"GO:0006432"},{"relation_name":"is_a","term_name":"tRNA aminoacylation for mitochondrial protein translation","termid":"GO:0070127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"part_of","termid":"GO:0140053"},{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0006520","GO:0006399","GO:0008150","GO:0010467","GO:0140053"],"is_obsolete":false,"name":"mitochondrial phenylalanyl-tRNA aminoacylation","termid":"GO:0070156"}


id: PBO:0001192
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"promoter contains MCB","termid":"PBO:0001192"}


id: GO:0031668
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an extracellular stimulus.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete cellular response to extracellular stimulus (obsolete GO:0031668)","termid":"GO:0031668"}


id: PBO:0038835
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADAMTS7 pseudogene 1","termid":"PBO:0038835"}


id: FYPO:0003736
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which the mitotic index is normal (i.e. indistinguishable from wild type). The mitotic index is the proportion of the population undergoing mitosis at any given time.","definition_xrefs":["PomBase:mah","PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population phenotype","termid":"FYPO:0000003"},{"relation_name":"is_a","term_name":"normal phenotype","termid":"FYPO:0000257"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000003"],"is_obsolete":false,"name":"normal mitotic index","termid":"FYPO:0003736"}


id: SO:0002056
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An intronic splicing regulatory element that functions to recruit trans acting splicing factors suppress the transcription of the gene or genes they control.","definition_xrefs":["PMID:23241926","SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"silencer","termid":"SO:0000625"},{"relation_name":"part_of","term_name":"intron","termid":"SO:0000188"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intronic_splicing_silencer","synonyms":[{"name":"ISS","type":"exact"},{"name":"intronic splicing silencer","type":"exact"}],"termid":"SO:0002056"}


id: PBO:0047826
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FOXO6 antisense RNA 1","termid":"PBO:0047826"}


id: MONDO:0001562
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hiatus hernia","termid":"MONDO:0007721"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"displacement of cardia through esophageal hiatus","secondary_identifiers":["DOID:12641","ICD10CM:Q40.1","ICD9:750.6","MEDGEN:510622","SCTID:47028006","UMLS:C0158674"],"synonyms":[{"name":"congenital hiatus hernia","type":"exact"}],"termid":"MONDO:0001562","xrefs":{"Monarch":{"xref_id":"0001562"}}}


id: GO:1901550
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of endothelial cell development.","definition_xrefs":["PMID:19470579","GOC:pr","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of endothelial cell differentiation","termid":"GO:0045601"},{"relation_name":"is_a","term_name":"regulation of cell development","termid":"GO:0060284"},{"relation_name":"regulates","term_name":"endothelial cell development","termid":"GO:0001885"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of endothelial cell development","termid":"GO:1901550"}


id: MOD:00163
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-serine residue to O-(N-acetylaminogalactosyl)-L-serine.","definition_xrefs":["PubMed:16005634","PubMed:115869","PubMed:8948436","RESID:AA0154","PubMed:3086323","PubMed:9092502"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acetylaminogalactosylated residue","termid":"MOD:00563"},{"relation_name":"is_a","term_name":"O-(N-acetylamino)hexosyl-L-serine","termid":"MOD:01675"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"O-(N-acetylamino)galactosyl-L-serine","synonyms":[{"name":"(2S)-2-amino-3-(2-acetamido-2-deoxy-alpha-D-galactopyranosyloxy)propanoic acid","type":"exact"},{"name":"CARBOHYD O-linked (GalNAc) serine","type":"exact"},{"name":"HexNAc","type":"related"},{"name":"O-(N-acetylamino)galactosyl-L-serine","type":"exact"},{"name":"O3-(N-acetylgalactosaminyl)serine","type":"exact"},{"name":"OGalNAcSer","type":"exact"},{"name":"mucin type O-glycosylserine","type":"exact"}],"termid":"MOD:00163"}


id: PBO:0049942
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-hydroxyisobutyryl-CoA hydrolase","termid":"PBO:0049942"}


id: GO:0002156
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of thyroid hormone mediated signaling pathway.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of thyroid hormone receptor signaling pathway","termid":"GO:0002155"},{"relation_name":"is_a","term_name":"negative regulation of intracellular signal transduction","termid":"GO:1902532"},{"relation_name":"negatively_regulates","term_name":"thyroid hormone receptor signaling pathway","termid":"GO:0002154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of thyroid hormone receptor signaling pathway","synonyms":[{"name":"negative regulation of thyroid hormone mediated signaling pathway","type":"exact"},{"name":"negative regulation of thyroid hormone mediated signalling pathway","type":"exact"}],"termid":"GO:0002156"}


id: PBO:0079432
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin gamma 1 pseudogene","termid":"PBO:0079432"}


id: MONDO:0006032
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of the urinary bladder.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"urinary bladder disorder","termid":"MONDO:0006026"},{"relation_name":"is_a","term_name":"inflammatory disease","termid":"MONDO:0021166"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cystitis","secondary_identifiers":["ICD9:595.9","DOID:1679","icd11.foundation:1181120673","MESH:D003556","NCIT:C26738","ICD9:595","ICD9:595.89","UMLS:C0010692","SCTID:38822007","MEDGEN:8227","EFO:1000025"],"synonyms":[{"name":"bladder infection","type":"exact"},{"name":"inflammation of urinary bladder","type":"exact"},{"name":"urinary bladder inflammation","type":"exact"}],"termid":"MONDO:0006032","xrefs":{"Monarch":{"xref_id":"0006032"}}}


id: PBO:0005070
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA polymerase alpha B-subunit","termid":"PBO:0005070"}


id: PBO:0003564
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUMO-targeted ubiquitin-protein ligase E3 Slx8 (predicted)","termid":"PBO:0003564"}


id: GO:0050513
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N(4)-{N-acetyl-beta-D-glucosaminyl-(1->2)-alpha-D-mannosyl-(1->3)-[N-acetyl-beta-D-glucosaminyl-(1->2)-alpha-D-mannosyl-(1->6)]-beta-D-mannosyl-(1->4)-N-acetyl-beta-D-glucosaminyl-(1->4)-N-acetyl-beta-D-glucosaminyl}-L-asparagine + UDP-alpha-D-xylose = N(4)-{N-acetyl-beta-D-glucosaminyl-(1->2)-alpha-D-mannosyl-(1->3)-[N-acetyl-beta-D-glucosaminyl-(1->2)-alpha-D-mannosyl-(1->6)]-[beta-D-xylosyl-(1->2)]-beta-D-mannosyl-(1->4)-N-acetyl-beta-D-glucosaminyl-(1->4)-N-acetyl-beta-D-glucosaminyl}-L-asparagine + H+ + UDP.","definition_xrefs":["EC:2.4.2.38","RHEA:10612"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-xylosyltransferase activity","termid":"GO:0035252"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016757","GO:0003674"],"is_obsolete":false,"name":"glycoprotein 2-beta-D-xylosyltransferase activity","secondary_identifiers":["MetaCyc:2.4.2.38-RXN","KEGG_REACTION:R06016"],"synonyms":[{"name":"1,2-beta-xylosyltransferase activity","type":"related"},{"name":"beta-1,2-xylosyltransferase activity","type":"related"},{"name":"glycoprotein 2-b-D-xylosyltransferase activity","type":"exact"}],"termid":"GO:0050513"}


id: PBO:0054866
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2280","termid":"PBO:0054866"}


id: GO:0007442
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the hindgut are generated and organized.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"},{"relation_name":"part_of","term_name":"digestive tract morphogenesis","termid":"GO:0048546"},{"relation_name":"part_of","term_name":"hindgut development","termid":"GO:0061525"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hindgut morphogenesis","termid":"GO:0007442"}


id: GO:0032670
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of interleukin-26 production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokine production","termid":"GO:0001817"},{"relation_name":"regulates","term_name":"interleukin-26 production","termid":"GO:0032630"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of interleukin-26 production","secondary_identifiers":["GO:0045530"],"synonyms":[{"name":"regulation of IL-26 production","type":"exact"},{"name":"regulation of interleukin-26 biosynthetic process","type":"narrow"}],"termid":"GO:0032670"}


id: GO:0017148
data:
  {"annotated_genes":["SJAG_05000","SJAG_02026","SJAG_01942","SJAG_02592","SJAG_04291","SJAG_00423","SJAG_02638","SJAG_03501","SJAG_03869","SJAG_00786","SJAG_00169","SJAG_00690"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95953,99800,118614,115235],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000766"},{"annotations":[91672,112539],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904689"},{"annotations":[75608,70356,115998,99694,94730,110050],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990625"},{"annotations":[75745],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001125"},{"annotations":[99808],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0141014"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of proteins by the translation of mRNA or circRNA.","definition_xrefs":["GOC:isa_complete"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of translation","termid":"GO:0006417"},{"relation_name":"is_a","term_name":"negative regulation of gene expression","termid":"GO:0010629"},{"relation_name":"is_a","term_name":"negative regulation of protein metabolic process","termid":"GO:0051248"},{"relation_name":"negatively_regulates","term_name":"translation","termid":"GO:0006412"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00169":null,"SJAG_00423":null,"SJAG_00690":null,"SJAG_00786":null,"SJAG_01942":null,"SJAG_02026":null,"SJAG_02592":null,"SJAG_02638":null,"SJAG_03501":null,"SJAG_03869":null,"SJAG_04291":null,"SJAG_05000":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"negative regulation of translation","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0016478"],"synonyms":[{"name":"down regulation of protein biosynthetic process","type":"exact"},{"name":"down-regulation of protein biosynthetic process","type":"exact"},{"name":"downregulation of protein biosynthetic process","type":"exact"},{"name":"inhibition of protein biosynthetic process","type":"narrow"},{"name":"negative regulation of protein anabolism","type":"exact"},{"name":"negative regulation of protein biosynthesis","type":"exact"},{"name":"negative regulation of protein biosynthetic process","type":"exact"},{"name":"negative regulation of protein formation","type":"exact"},{"name":"negative regulation of protein synthesis","type":"exact"},{"name":"protein biosynthesis inhibitor activity","type":"related"},{"name":"protein biosynthetic process inhibitor activity","type":"related"}],"termid":"GO:0017148","terms_by_termid":{"GO:0141014":null,"GO:1904689":null,"GO:1990625":null,"GO:2000766":null,"GO:2001125":null}}


id: MOD:01744
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom of a residue with the Proteome Sciences TMT6plex-129 reporter+balance group.","definition_xrefs":["Unimod:737"],"direct_ancestors":[{"relation_name":"is_a","term_name":"TMT6plex reporter+balance reagent acylated residue","termid":"MOD:01715"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMT6plex-129 reporter+balance reagent acylated residue","synonyms":[{"name":"3-[(2,6-dimethylpiperidin-1-yl)acetyl]amino)propanoyl","type":"exact"},{"name":"Sixplex Tandem Mass Tag(TM)","type":"related"},{"name":"TMT6plex","type":"related"}],"termid":"MOD:01744"}


id: MONDO:0100301
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inherited susceptibility or predisposition to developing capillary infantile hemangioma.","definition_xrefs":["MONDO:patterns/inherited_susceptibility"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary neoplastic syndrome","termid":"MONDO:0015356"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hemangioma, capillary infantile, susceptibility to","secondary_identifiers":["MEDGEN:864857","UMLS:C4016420"],"termid":"MONDO:0100301","xrefs":{"Monarch":{"xref_id":"0100301"}}}


id: PBO:0079762
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-fold modifier conjugating enzyme 1","termid":"PBO:0079762"}


id: MONDO:0001914
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare form of necrotizing anterior scleritis without pain in which the sclera is notably white, avascular and thin. Both choroidal exposure and staphyloma formation may occur.","direct_ancestors":[{"relation_name":"is_a","term_name":"necrotizing scleritis","termid":"MONDO:0040699"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"scleromalacia perforans","secondary_identifiers":["DOID:14230","icd11.foundation:740830358","ICD9:379.04","SCTID:26664005","MEDGEN:509929","UMLS:C0155354"],"termid":"MONDO:0001914","xrefs":{"Monarch":{"xref_id":"0001914"}}}


id: PBO:0051852
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iroquois homeobox 5","termid":"PBO:0051852"}


id: PR:Q10074
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- avt3 gene.","definition_xrefs":["UniProtKB:Q10074","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar amino acid transporter 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3H1.09c","synonyms":[{"name":"Spom972h-avt3","type":"exact"}],"termid":"PR:Q10074"}


id: FYPO:0007609
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the posttranscriptional methylation of a guanosine residue in a tRNA molecule to form 7-methylguanosine does not occur.","definition_xrefs":["PMID:32841241","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal tRNA methylation","termid":"FYPO:0001766"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000294","FYPO:0001985","FYPO:0006551","FYPO:0005447","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"abolished tRNA guanosine 7-methylation","synonyms":[{"name":"abolished 7-methylguanosine level in tRNA","type":"related"},{"name":"abolished tRNA 7-methylguanosine formation","type":"exact"},{"name":"abolished tRNA guanosine 7-methylation during mitotic cell cycle","type":"related"},{"name":"abolished tRNA guanosine 7-methylation during vegetative growth","type":"exact"},{"name":"abolished tRNA m7G formation","type":"exact"},{"name":"tRNA guanosine 7-methylation abolished","type":"exact"}],"termid":"FYPO:0007609"}


id: MONDO:0859006
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"skeletal dysplasia","termid":"MONDO:0018230"},{"relation_name":"is_a","term_name":"dysostosis","termid":"MONDO:0018234"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"proximal femoral focal deficiency","secondary_identifiers":["Orphanet:633228","UMLS:C0431996","MEDGEN:609280"],"termid":"MONDO:0859006","xrefs":{"Monarch":{"xref_id":"0859006"}}}


id: MONDO:0004084
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete uveal epithelioid cell melanoma (obsolete MONDO:0004084)","termid":"MONDO:0004084","xrefs":{"Monarch":{"xref_id":"0004084"}}}


id: PR:Q9P769
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rpl1002 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P769"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L10-B (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAP7G5.05","synonyms":[{"name":"Spom972h-rpl1002","type":"exact"}],"termid":"PR:Q9P769"}


id: PBO:0063454
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphodiesterase 11A","termid":"PBO:0063454"}


id: GO:1990915
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The action of a molecule that contributes to the structural integrity of an ascospore wall.","definition_xrefs":["PMID:24623719"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structural constituent of cell wall","termid":"GO:0005199"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005198"}],"interesting_parent_ids":["GO:0003674","GO:0005198"],"is_obsolete":false,"name":"structural constituent of ascospore wall","termid":"GO:1990915"}


id: PBO:0090349
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pig-X, glycosylphosphatidylinositol-mannosyltransferase I complex subunit","termid":"PBO:0090349"}


id: MOD:01899
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-arginine residue and an L-cysteine residue to form arginine thiazole-4-carboxylic acid.","definition_xrefs":["RESID:AA0570","PubMed:21950656","PubMed:21568297"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thiazole/thiazoline ring crosslinked residues","termid":"MOD:01420"},{"relation_name":"is_a","term_name":"didehydrogenated residue","termid":"MOD:01888"},{"relation_name":"is_a","term_name":"crosslinked L-arginine residue","termid":"MOD:02041"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"L-arginine thiazole-4-carboxylic acid","synonyms":[{"name":"2-[(1S)-1-amino-4-([diaminomethylidene]amino)butyl]-1,3-thiazole-4-carboxylic acid","type":"exact"},{"name":"CROSSLNK Thiazole-4-carboxylic acid (Arg-Cys)","type":"exact"},{"name":"L-arginine thiazole-4-carboxylic acid","type":"exact"}],"termid":"MOD:01899"}


id: PBO:0000733
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone acetyltransferase Hat1","termid":"PBO:0000733"}


id: GO:0046848
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to hydroxyapatite, the calcium phosphate mineral of formula Ca10(PO4)6(OH)2 found both in rocks of nonorganic origin and as a component of bone and dentin.","definition_xrefs":["PMID:2438276"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small molecule binding","termid":"GO:0036094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"hydroxyapatite binding","synonyms":[{"name":"hydroxylapatite binding","type":"exact"}],"termid":"GO:0046848"}


id: MONDO:0018783
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"rheumatic disorder","termid":"MONDO:0005554"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibroblastic rheumatism","secondary_identifiers":["GARD:21958","MEDGEN:724307","icd11.foundation:112300601","Orphanet:477650","ICD9:729.0","SCTID:399964004","UMLS:C1302753"],"termid":"MONDO:0018783","xrefs":{"Monarch":{"xref_id":"0018783"}}}


id: PBO:0069965
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1260, pseudogene","termid":"PBO:0069965"}


id: MONDO:0003527
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A rare genetic neoplastic disorder with an autosomal dominant pattern of inheritance characterized by multiple, recurrent skin cancers that spontaneously resolve. It has been described almost exclusively in families of Scottish origin. It is caused by a mutation in the tumor-suppressing gene, TGFBR1, on chromosome 9. Clinical presentation is usually rapidly growing squamous cell carcinomas or keratoacanthomas that primarily localize to sun-exposed areas. Appearance of the neoplasms occurs over several weeks before receding over the course of several months if untreated. The regression of the lesions leaves pitting cicatrices but no other known sequelae.","gene_count":0,"genotype_count":0,"name":"obsolete Ferguson-Smith tumor (obsolete MONDO:0003527)","termid":"MONDO:0003527","xrefs":{"Monarch":{"xref_id":"0003527"}}}


id: GO:0062110
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of DNA recombinase complex disassembly, the disaggregation of a DNA recombinase complex into its constituent components.","definition_xrefs":["PMID:30297419"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein-containing complex disassembly","termid":"GO:0043242"},{"relation_name":"is_a","term_name":"regulation of DNA recombinase disassembly","termid":"GO:0062109"},{"relation_name":"negatively_regulates","term_name":"DNA recombinase disassembly","termid":"GO:1990986"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of DNA recombinase disassembly","termid":"GO:0062110"}


id: PBO:0072679
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RUN and FYVE domain containing 1","termid":"PBO:0072679"}


id: PBO:0068624
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 4, pseudogene","termid":"PBO:0068624"}


id: MONDO:0016073
data:
  {"annotated_genes":["SJAG_04008","SJAG_00995","SJAG_04114","SJAG_04631","SJAG_04938","SJAG_02828","SJAG_03199","SJAG_02031","SJAG_03603"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87224],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008955"},{"annotations":[86052],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012553"},{"annotations":[85382],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014696"},{"annotations":[86053],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012554"},{"annotations":[86325,86326],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0024552"},{"annotations":[86324],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010671"},{"annotations":[86008],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014296"},{"annotations":[85625],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010485"},{"annotations":[86955],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010216"}]},"cv_name":"mondo","definition":"A microphthalmia that is part of a larger syndrome.","definition_xrefs":["MONDO:patterns/syndromic"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"microphthalmia","termid":"MONDO:0021129"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00995":null,"SJAG_02031":null,"SJAG_02828":null,"SJAG_03199":null,"SJAG_03603":null,"SJAG_04008":null,"SJAG_04114":null,"SJAG_04631":null,"SJAG_04938":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"syndromic microphthalmia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["Orphanet:202948","UMLS:C5679782","DOID:0080636","GARD:20342","MEDGEN:1826052","OMIMPS:309800"],"synonyms":[{"name":"microphthalmia, syndromic","type":"exact"},{"name":"syndrome associated with microphthalmia","type":"exact"},{"name":"syndromic microphthalmia","type":"exact"}],"termid":"MONDO:0016073","terms_by_termid":{"MONDO:0008955":null,"MONDO:0010216":null,"MONDO:0010485":null,"MONDO:0010671":null,"MONDO:0012553":null,"MONDO:0012554":null,"MONDO:0014296":null,"MONDO:0014696":null,"MONDO:0024552":null},"xrefs":{"Monarch":{"xref_id":"0016073"}}}


id: MONDO:0014180
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"epidermolysis bullosa simplex","termid":"MONDO:0017610"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"epidermolysis bullosa simplex 3, localized or generalized intermediate, with BP230 deficiency","secondary_identifiers":["Orphanet:412181","OMIM:615425","UMLS:C3809470","MEDGEN:815800","GARD:17690"],"synonyms":[{"name":"DST-related epidermolysis bullosa simplex","type":"exact"},{"name":"EBS-AR BP230","type":"exact"},{"name":"EBSB2","type":"related"},{"name":"epidermolysis bullosa simplex 3, localised or generalised intermediate, with bp230 deficiency","type":"exact"},{"name":"epidermolysis bullosa simplex 3, localized or generalized intermediate, with bp230 deficiency","type":"exact"},{"name":"epidermolysis bullosa simplex due to BP230 deficiency","type":"exact"},{"name":"epidermolysis bullosa simplex, autosomal recessive 2","type":"related"},{"name":"epidermolysis bullosa simplex, autosomal recessive type 2","type":"exact"}],"termid":"MONDO:0014180","xrefs":{"Monarch":{"xref_id":"0014180"}}}


id: FYPO:0001421
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which protein processing is abnormal. Protein processing is the cleavage of one or more bonds within a protein that leads to the formation of mature, fully functional protein.","definition_xrefs":["GO:0030163","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein metabolic process during vegetative growth","termid":"FYPO:0000328"},{"relation_name":"is_a","term_name":"abnormal protein processing","termid":"FYPO:0006374"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0006551","FYPO:0002274","FYPO:0001985"],"is_obsolete":false,"name":"abnormal protein processing during vegetative growth","synonyms":[{"name":"abnormal protein cleavage during vegetative growth","type":"related"},{"name":"abnormal protein maturation by peptide bond cleavage during vegetative growth","type":"exact"},{"name":"abnormal protein maturation by peptide bond hydrolysis during vegetative growth","type":"exact"},{"name":"abnormal protein processing during mitotic cell cycle","type":"related"}],"termid":"FYPO:0001421"}


id: GO:2000290
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of myotome development.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"regulates","term_name":"myotome development","termid":"GO:0061055"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of myotome development","termid":"GO:2000290"}


id: PBO:0001026
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IQ domain","termid":"PBO:0001026"}


id: PBO:0016901
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"snu2 transcription termination requires hairpin structure cleaved by Pac1","termid":"PBO:0016901"}


id: RO:0002600
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Holds between a material entity c and a pathological process p if and only if c is capable of some activity a, where a negatively regulates p.","direct_ancestors":[{"relation_name":"is_a","term_name":"capable_of_positively_regulating","termid":"RO:0002598"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"capable_of_upregulating_or_causing_pathological_process","termid":"RO:0002600"}


id: GO:2000216
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of proline metabolic process.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of amino acid metabolic process","termid":"GO:0045764"},{"relation_name":"is_a","term_name":"positive regulation of small molecule metabolic process","termid":"GO:0062013"},{"relation_name":"is_a","term_name":"regulation of proline metabolic process","termid":"GO:2000214"},{"relation_name":"positively_regulates","term_name":"proline metabolic process","termid":"GO:0006560"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006520"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006520"],"is_obsolete":false,"name":"positive regulation of proline metabolic process","synonyms":[{"name":"positive regulation of proline metabolism","type":"exact"}],"termid":"GO:2000216"}


id: MONDO:0005340
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Loss of scalp and body hair involving microscopically inflammatory patchy areas.","definition_xrefs":["MESH:D000506"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alopecia","termid":"MONDO:0004907"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alopecia areata","secondary_identifiers":["ICD10CM:L63","icd11.foundation:65720611","SCTID:68225006","UMLS:C0002171","EFO:0004192","ICD9:704.01","MEDGEN:213","GARD:5782","DOID:986"],"synonyms":[{"name":"alopecia areata","type":"exact"},{"name":"alopecia circumscripta","type":"related"},{"name":"circumscribed alopecia","type":"exact"},{"name":"patchy loss of hair","type":"related"}],"termid":"MONDO:0005340","xrefs":{"Monarch":{"xref_id":"0005340"}}}


id: PBO:0000347
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Binding Upb Nine of 107 kDa","termid":"PBO:0000347"}


id: GO:0072285
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A transition where a mesenchymal cell establishes apical/basolateral polarity,forms intercellular adhesive junctions, synthesizes basement membrane components and becomes an epithelial cell that will contribute to the shaping of the metanephric renal vesicle.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesenchymal to epithelial transition involved in metanephros morphogenesis","termid":"GO:0003337"},{"relation_name":"is_a","term_name":"mesenchymal to epithelial transition involved in renal vesicle formation","termid":"GO:0072036"},{"relation_name":"part_of","term_name":"metanephric renal vesicle formation","termid":"GO:0072093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesenchymal to epithelial transition involved in metanephric renal vesicle formation","termid":"GO:0072285"}


id: MONDO:0015403
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Non-involuting congenital hemangioma (NICH) is a rare type of infantile hemangioma, which is a tumor that forms from the abnormal growth of blood vessels in the skin. NICH looks like an oval,purplish mark or bump that can occur on any part of the body. NICH is present from birth (congenital) and increases in size as the child grows. Unlike other hemangiomas, NICH do not disappear spontaneously (involute).","definition_xrefs":["GARD:0010890"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital hemangioma","termid":"MONDO:0018715"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-involuting congenital hemangioma","secondary_identifiers":["GARD:10890","Orphanet:141179","SCTID:703295003","UMLS:C1275417","NCIT:C172208","MEDGEN:698685"],"synonyms":[{"name":"NICH","type":"exact"},{"name":"noninvoluting congenital hemangioma","type":"exact"}],"termid":"MONDO:0015403","xrefs":{"Monarch":{"xref_id":"0015403"}}}


id: MONDO:0015035
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Lissencephaly with cerebellar hypoplasia type B (LCHb) is a form of lissencephaly with cerebellar hypoplasia characterized by subtle microcephaly, hypotonia and neurological and cognitive development delay. Hippocampal malformation is a characteristic imaging feature of LCHb.","definition_xrefs":["Orphanet:100012"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lissencephaly with cerebellar hypoplasia","termid":"MONDO:0019450"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"lissencephaly with cerebellar hypoplasia type B","secondary_identifiers":["SCTID:715819005","icd11.foundation:1056934902","UMLS:C4274993","MEDGEN:906879","GARD:19732"],"termid":"MONDO:0015035","xrefs":{"Monarch":{"xref_id":"0015035"}}}


id: MONDO:0012944
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"tibial aplasia-ectrodactyly syndrome","termid":"MONDO:0018050"},{"relation_name":"is_a","term_name":"non-syndromic limb reduction defect","termid":"MONDO:0019713"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"chromosome 17P13.3, telomeric, duplication syndrome","secondary_identifiers":["GARD:15572","OMIM:612576","MESH:C567245","UMLS:C2675492","MEDGEN:390813"],"synonyms":[{"name":"chromosome 17P13.3, telomeric, duplication syndrome","type":"exact"},{"name":"split-hand/foot malformation with long bone deficiency 3","type":"related"}],"termid":"MONDO:0012944","xrefs":{"Monarch":{"xref_id":"0012944"}}}


id: GO:0052408
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways performed by an organism involving cellulose in the cell wall of the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete metabolism by host of symbiont cell wall cellulose (obsolete GO:0052408)","termid":"GO:0052408"}


id: PBO:0073948
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 20 member 1 pseudogene 1","termid":"PBO:0073948"}


id: PBO:0031544
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_targeting_to_vacuole","termid":"PBO:0031544"}


id: MONDO:0016443
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An acquired form of collagenoma that appears in childhood. It is characterized by discrete, firm, skin-colored, and slightly elevated cutaneous papules, nodules or plaques that may be generalized, or found on the trunk and the extremities.","definition_xrefs":["NCIT:C4707"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dermis disorder","termid":"MONDO:0021154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"papular elastorrhexis","secondary_identifiers":["icd11.foundation:1231672259","SCTID:239138008","UMLS:C5680907","MEDGEN:1813032","Orphanet:228264","GARD:20583"],"synonyms":[{"name":"Nevus anelasticus","type":"exact"},{"name":"disseminated nevus anelasticus","type":"exact"},{"name":"eruptive collagenoma","type":"exact"}],"termid":"MONDO:0016443","xrefs":{"Monarch":{"xref_id":"0016443"}}}


id: PBO:0057200
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 372","termid":"PBO:0057200"}


id: FYPO:0004094
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype that affects the localization of a protein in a cell during the meiotic cell cycle. A protein may be observed in a place where it is not normally found, absent from a place where it is normally found, or both.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization","termid":"FYPO:0001370"},{"relation_name":"is_a","term_name":"abnormal cellular process during meiotic cell cycle","termid":"FYPO:0007260"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000138","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abnormal protein localization during meiotic cell cycle","synonyms":[{"name":"abnormal cellular protein localisation during meiotic cell cycle","type":"exact"},{"name":"abnormal cellular protein localization during meiotic cell cycle","type":"exact"},{"name":"abnormal protein localisation during meiotic cell cycle","type":"exact"}],"termid":"FYPO:0004094"}


id: MONDO:0012951
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"colorectal cancer","termid":"MONDO:0005575"},{"relation_name":"is_a","term_name":"hereditary neoplastic syndrome","termid":"MONDO:0015356"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"colorectal cancer, susceptibility to, 8","secondary_identifiers":["OMIM:612589","MEDGEN:436446","UMLS:C2675483"],"synonyms":[{"name":"CRCS8","type":"exact"},{"name":"colorectal cancer, susceptibility to, 8","type":"exact"},{"name":"colorectal cancer, susceptibility to, on chromosome 14Q","type":"related"}],"termid":"MONDO:0012951","xrefs":{"Monarch":{"xref_id":"0012951"}}}


id: GO:0060022
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The biological process whose specific outcome is the progression of the hard palate from an initial condition to its mature state. This process begins with the formation of the structure and ends with the mature structure, whatever form that may be including its natural destruction. The hard palate is the anterior portion of the palate consisting of bone and mucous membranes.","definition_xrefs":["ISBN:0721662544","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"secondary palate development","termid":"GO:0062009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hard palate development","synonyms":[{"name":"palatum durum development","type":"exact"}],"termid":"GO:0060022"}


id: SO:0001597
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A secondary structure variant that compensate for the change made by a previous variant.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcript_secondary_structure_variant","termid":"SO:0001596"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"compensatory_transcript_secondary_structure_variant","synonyms":[{"name":"compensatory transcript secondary structure variant","type":"exact"}],"termid":"SO:0001597"}


id: PR:Q10439
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An Xaa-Pro aminopeptidase 3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01897","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intermediate cleaving peptidase 55 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC12B10.05","secondary_identifiers":["UniProtKB:Q10439"],"synonyms":[{"name":"Spom972h-XPNPEP3","type":"exact"}],"termid":"PR:Q10439"}


id: PBO:0083464
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified gene MET4/YNL104C","termid":"PBO:0083464"}


id: GO:1905715
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cornification.","definition_xrefs":["PMID:26014679","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of programmed cell death","termid":"GO:0043067"},{"relation_name":"regulates","term_name":"cornification","termid":"GO:0070268"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cornification","termid":"GO:1905715"}


id: MONDO:0045044
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease or disorder that involves the ligament.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"musculoskeletal system disorder","termid":"MONDO:0002081"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ligament disorder","secondary_identifiers":["UMLS:C0263976","SCTID:60492000","MEDGEN:538235"],"synonyms":[{"name":"disease of ligament","type":"exact"},{"name":"disease or disorder of ligament","type":"exact"},{"name":"disorder of ligament","type":"exact"},{"name":"ligament disease or disorder","type":"exact"}],"termid":"MONDO:0045044","xrefs":{"Monarch":{"xref_id":"0045044"}}}


id: PBO:0000880
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COP9/signalosome complex subunit Csn2","termid":"PBO:0000880"}


id: GO:0045295
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to catenin complex gamma subunit.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"gamma-catenin binding","synonyms":[{"name":"plakoglobin binding","type":"exact"}],"termid":"GO:0045295"}


id: PBO:0087892
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcription coactivator; component of the ADA and SAGA transcriptional adaptor/HAT (histone acetyltransferase) complexes","termid":"PBO:0087892"}


id: PBO:0053243
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LHFPL tetraspan subfamily member 7","termid":"PBO:0053243"}


id: PBO:0072455
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S29 pseudogene 19","termid":"PBO:0072455"}


id: GO:0097632
data:
  {"annotated_genes":["SJAG_02699"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[94985],"is_not":false,"summary":null,"term":"GO:0097632"}]},"cv_name":"cellular_component","definition":"The component of the phagophore assembly site membrane consisting of gene products and protein complexes that are loosely bound to one of its surfaces, but not integrated into the hydrophobic region.","definition_xrefs":["GOC:mf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extrinsic component of organelle membrane","termid":"GO:0031312"},{"relation_name":"part_of","term_name":"phagophore assembly site membrane","termid":"GO:0034045"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02699":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0000407"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0000407","GO:0005575"],"is_obsolete":false,"name":"extrinsic component of phagophore assembly site membrane","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"extrinsic component of pre-autophagosomal structure membrane","type":"narrow"},{"name":"extrinsic to phagophore assembly site membrane","type":"exact"},{"name":"phagophore assembly site peripheral membrane","type":"related"}],"termid":"GO:0097632","terms_by_termid":{"GO:0097632":null}}


id: MOD:01158
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that modifies an L-selenocysteine residue.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"L-selenocysteine residue","termid":"MOD:00031"},{"relation_name":"is_a","term_name":"selenium containing residue","termid":"MOD:00745"},{"relation_name":"is_a","term_name":"protein modification categorized by amino acid modified","termid":"MOD:01157"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"modified L-selenocysteine residue","termid":"MOD:01158"}


id: PBO:0042051
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 110","termid":"PBO:0042051"}


id: GO:0051974
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops or reduces the activity of the enzyme telomerase, which catalyzes of the reaction: deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of telomerase activity (obsolete GO:0051974)","synonyms":[{"name":"down regulation of telomerase activity","type":"exact"},{"name":"down-regulation of telomerase activity","type":"exact"},{"name":"downregulation of telomerase activity","type":"exact"},{"name":"inhibition of telomerase activity","type":"narrow"},{"name":"telomerase inhibitor","type":"related"}],"termid":"GO:0051974"}


id: PBO:0078721
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Leu (anticodon TAG) 1-1","termid":"PBO:0078721"}


id: PBO:0066468
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"replication factor C subunit 5","termid":"PBO:0066468"}


id: GO:0080069
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 7-methylthioheptyl-desulfoglucosinolate + 3'-phosphoadenosine 5'-phosphosulfate = 7-methylthioheptyl-glucosinolate + adenosine 3',5'-bisphosphate.","definition_xrefs":["PMID:19077143"],"gene_count":0,"genotype_count":0,"name":"obsolete 7-methylthioheptyl-desulfoglucosinolate sulfotransferase activity (obsolete GO:0080069)","termid":"GO:0080069"}


id: MONDO:0012324
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare partial deletion of the long arm of chromosome 14 characterized by ocular anomalies (anopthalmia/microphthalmia, ptosis, hypertelorism, exophthalmos), pituitary anomalies (pituitary hypoplasia/aplasia with growth hormone deficiency and growth retardation) and hand/foot anomalies (polydactyly, short digits, pes cavus). Other clinical features may include muscular hypotonia, psychomotor development delay/intellectual disability, dysmorphic signs (facial asymmetry, microretrognathia, high-arched palate, ear anomalies), congenital genitourinary malformations, hearing impairment. Smaller 14q22 deletions may have variable expression.","definition_xrefs":["Orphanet:264200"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"},{"relation_name":"is_a","term_name":"partial deletion of the long arm of chromosome 14","termid":"MONDO:0016912"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Frias syndrome","secondary_identifiers":["GARD:2384","MESH:C535639","Orphanet:2055","UMLS:C1864825","MEDGEN:400621","OMIM:609640"],"synonyms":[{"name":"14q22-q23 microdeletion syndrome","type":"exact"},{"name":"14q22q23 microdeletion syndrome","type":"exact"},{"name":"Del(14)(q22q23)","type":"exact"},{"name":"Frias syndrome","type":"exact"},{"name":"Growth deficiency, Facial anomalies, and brachydactyly","type":"related"},{"name":"chromosome 14Q22 deletion syndrome","type":"related"},{"name":"monosomy 14q22-q23","type":"exact"},{"name":"monosomy 14q22q23","type":"exact"}],"termid":"MONDO:0012324","xrefs":{"Monarch":{"xref_id":"0012324"}}}


id: MONDO:0007564
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pilomatrixoma is a rare and benign hair cell-derived tumor occurring mostly in young adults (usually under the age of 20) and characterized as a 3-30 mm solitary, painless, firm, mobile, deep dermal or subcutaneous tumor, most commonly found in the head, neck or upper extremities. When superficial, the tumors tint the skin blue-red. Multiple pilomatrixomas are seen in myotonic dystrophy, Gardner syndrome, Rubinstein-Taybi syndrome, and Turner syndrome.","definition_xrefs":["Orphanet:91414"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete rare skin tumor or hamartoma (obsolete MONDO:0019300)","termid":"MONDO:0019300"},{"relation_name":"is_a","term_name":"hair follicle neoplasm","termid":"MONDO:0003413"},{"relation_name":"is_a","term_name":"hereditary skin disorder","termid":"MONDO:0100118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"pilomatrixoma","secondary_identifiers":["OMIM:132600","EFO:0009082","MedDRA:10035040","GARD:9452","icd11.foundation:378820295","MESH:D018296","DOID:5374","NCIT:C7368","UMLS:C0206711","MEDGEN:61666","ICDO:8110/0","SCTID:274901004"],"synonyms":[{"name":"PTR","type":"related"},{"name":"benign hair follicle neoplasm","type":"narrow"},{"name":"benign pilomatricoma","type":"narrow"},{"name":"benign pilomatrixoma","type":"narrow"},{"name":"calcifying Epitherlioma of Malherbe","type":"exact"},{"name":"calcifying epithelioma of Malherbe","type":"related"},{"name":"epithelioma calcificans of Malherbe","type":"exact"},{"name":"pilomatricoma","type":"exact"},{"name":"pilomatricoma, somatic","type":"exact"},{"name":"pilomatrixoma","type":"exact"},{"name":"pilomatrixoma, benign","type":"exact"}],"termid":"MONDO:0007564","xrefs":{"Monarch":{"xref_id":"0007564"}}}


id: PBO:0001558
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4.2.1.20","termid":"PBO:0001558"}


id: PBO:0085506
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein component of the small (40S) ribosomal subunit; homologous to mammalian ribosomal protein S10, no bacterial homolog; RPS10A has a paralog, RPS10B, that arose from the whole genome duplication; mutations in the human homolog associated with Diamond-Blackfan anemia","termid":"PBO:0085506"}


id: MONDO:0006492
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete vulvar squamous cell carcinoma (obsolete MONDO:0006492)","termid":"MONDO:0006492","xrefs":{"Monarch":{"xref_id":"0006492"}}}


id: PBO:0066310
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RBPJ pseudogene 4","termid":"PBO:0066310"}


id: GO:0015603
data:
  {"annotated_genes":["SJAG_03667","SJAG_02735","SJAG_02834"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[74415,80305,74490],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015343"}]},"cv_name":"molecular_function","definition":"Enables the transfer of an iron chelate from one side of a membrane to the other. An iron chelate is a heterocyclic compound having a metal ion attached by coordinate bonds to at least two nonmetal ions.","definition_xrefs":["PMID:17660286"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transporter activity","termid":"GO:0022857"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02735":null,"SJAG_02834":null,"SJAG_03667":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"iron chelate transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0015603","terms_by_termid":{"GO:0015343":null}}


id: GO:1901545
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a raffinose stimulus.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to carbohydrate","termid":"GO:0009743"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to raffinose","termid":"GO:1901545"}


id: MONDO:0022414
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete allain-babin-demarquez syndrome (obsolete MONDO:0022414)","secondary_identifiers":["Orphanet:1526"],"synonyms":[{"name":"acro cephalo synostosis","type":"related"},{"name":"craniosynostosis synostoses hypertensive nephropathy","type":"related"}],"termid":"MONDO:0022414","xrefs":{"Monarch":{"xref_id":"0022414"}}}


id: GO:0004610
data:
  {"annotated_genes":["SJAG_03723","SJAG_00978"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[71441,72355],"is_not":false,"summary":null,"term":"GO:0004610"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: N-acetyl-alpha-D-glucosamine 1-phosphate = N-acetyl-D-glucosamine 6-phosphate.","definition_xrefs":["RHEA:23804","EC:5.4.2.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular phosphotransferase activity","termid":"GO:0016868"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00978":null,"SJAG_03723":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016853"],"is_obsolete":false,"name":"phosphoacetylglucosamine mutase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-446185","KEGG_REACTION:R08193","MetaCyc:PHOSACETYLGLUCOSAMINEMUT-RXN"],"synonyms":[{"name":"N-acetyl-D-glucosamine 1,6-phosphomutase activity","type":"related"},{"name":"N-acetyl-alpha-D-glucosamine 1,6-phosphomutase activity","type":"related"},{"name":"N-acetylglucosamine-phosphate mutase activity","type":"related"},{"name":"acetylaminodeoxyglucose phosphomutase activity","type":"related"},{"name":"acetylglucosamine phosphomutase activity","type":"related"},{"name":"phospho-N-acetylglucosamine mutase activity","type":"related"}],"termid":"GO:0004610","terms_by_termid":{"GO:0004610":null}}


id: PBO:0049766
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HLA complex group 4 pseudogene 3","termid":"PBO:0049766"}


id: PBO:0045886
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EEF1E1-BLOC1S5 readthrough (NMD candidate)","termid":"PBO:0045886"}


id: FYPO:0002436
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the orientation of actin cables within a cell is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal actin cables","termid":"FYPO:0002435"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0004803"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0004803","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"misoriented actin cables","synonyms":[{"name":"abnormal actin cable orientation","type":"exact"},{"name":"abnormal formin-nucleated actin cable orientation","type":"exact"},{"name":"misoriented actin cables during mitotic cell cycle","type":"related"},{"name":"misoriented actin cables during vegetative growth","type":"exact"},{"name":"misoriented formin-nucleated actin cables","type":"exact"}],"termid":"FYPO:0002436"}


id: PBO:0050608
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydroxysteroid 17-beta dehydrogenase 2","termid":"PBO:0050608"}


id: PBO:0050093
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 1 pseudogene 3","termid":"PBO:0050093"}


id: PBO:0078486
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ile (anticodon AAT) 6-1","termid":"PBO:0078486"}


id: GO:0032824
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of natural killer cell differentiation.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of natural killer cell activation","termid":"GO:0032815"},{"relation_name":"is_a","term_name":"regulation of natural killer cell differentiation","termid":"GO:0032823"},{"relation_name":"is_a","term_name":"negative regulation of lymphocyte differentiation","termid":"GO:0045620"},{"relation_name":"negatively_regulates","term_name":"natural killer cell differentiation","termid":"GO:0001779"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of natural killer cell differentiation","synonyms":[{"name":"down regulation of natural killer cell differentiation","type":"exact"},{"name":"down-regulation of natural killer cell differentiation","type":"exact"},{"name":"downregulation of natural killer cell differentiation","type":"exact"},{"name":"inhibition of natural killer cell differentiation","type":"narrow"},{"name":"negative regulation of NK cell differentiation","type":"exact"},{"name":"negative regulation of natural killer cell development","type":"related"}],"termid":"GO:0032824"}


id: MONDO:0020387
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"double outlet right ventricle","termid":"MONDO:0018089"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"double outlet right ventricle with subpulmonary ventricular septal defect","secondary_identifiers":["MEDGEN:365502","GARD:19616","Orphanet:99045","icd11.foundation:1963185163","SCTID:448794008","UMLS:C1956412"],"synonyms":[{"name":"DORV with subpulmonary VSD","type":"exact"},{"name":"DORV-TGA","type":"exact"},{"name":"Double outlet right ventricle with transposition of the great arteries","type":"exact"},{"name":"Taussig-Bing syndrome","type":"exact"}],"termid":"MONDO:0020387","xrefs":{"Monarch":{"xref_id":"0020387"}}}


id: GO:1901307
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of spermidine biosynthetic process.","definition_xrefs":["GOC:pm","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of biosynthetic process","termid":"GO:0009891"},{"relation_name":"is_a","term_name":"positive regulation of amine metabolic process","termid":"GO:0033240"},{"relation_name":"is_a","term_name":"regulation of spermidine biosynthetic process","termid":"GO:1901304"},{"relation_name":"positively_regulates","term_name":"spermidine biosynthetic process","termid":"GO:0008295"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of spermidine biosynthetic process","synonyms":[{"name":"activation of spermidine anabolism","type":"exact"},{"name":"activation of spermidine biosynthesis","type":"exact"},{"name":"activation of spermidine biosynthetic process","type":"narrow"},{"name":"activation of spermidine formation","type":"exact"},{"name":"activation of spermidine synthesis","type":"exact"},{"name":"positive regulation of spermidine anabolism","type":"exact"},{"name":"positive regulation of spermidine biosynthesis","type":"exact"},{"name":"positive regulation of spermidine formation","type":"exact"},{"name":"positive regulation of spermidine synthesis","type":"exact"},{"name":"up regulation of spermidine anabolism","type":"exact"},{"name":"up regulation of spermidine biosynthesis","type":"exact"},{"name":"up regulation of spermidine biosynthetic process","type":"exact"},{"name":"up regulation of spermidine formation","type":"exact"},{"name":"up regulation of spermidine synthesis","type":"exact"},{"name":"up-regulation of spermidine anabolism","type":"exact"},{"name":"up-regulation of spermidine biosynthesis","type":"exact"},{"name":"up-regulation of spermidine biosynthetic process","type":"exact"},{"name":"up-regulation of spermidine formation","type":"exact"},{"name":"up-regulation of spermidine synthesis","type":"exact"},{"name":"upregulation of spermidine anabolism","type":"exact"},{"name":"upregulation of spermidine biosynthesis","type":"exact"},{"name":"upregulation of spermidine biosynthetic process","type":"exact"},{"name":"upregulation of spermidine formation","type":"exact"},{"name":"upregulation of spermidine synthesis","type":"exact"}],"termid":"GO:1901307"}


id: MONDO:0017125
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete oculofaciocardiodental syndrome (obsolete MONDO:0017125)","termid":"MONDO:0017125","xrefs":{"Monarch":{"xref_id":"0017125"}}}


id: PBO:0066021
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAN binding protein 2","termid":"PBO:0066021"}


id: GO:0018998
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete metaxin (obsolete GO:0018998)","synonyms":[{"name":"metaxin","type":"exact"}],"termid":"GO:0018998"}


id: MONDO:0011275
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare autosomal recessive acromesomelic dysplasia characterized by severe dwarfism (adult height >120 cm), both axial and appendicular involvement (shortening of the middle and distal segments of limbs and vertebral shortening), and with normal facial appearance and intelligence. It is a less severe form than acromesomelic dysplasia, Grebe type and acromesomelic dysplasia, Hunter-Thomson type.","definition_xrefs":["Orphanet:40"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acromesomelic dysplasia","termid":"MONDO:0019696"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"acromesomelic dysplasia 1, Maroteaux type","secondary_identifiers":["GARD:507","DOID:0080050","MESH:C535661","MEDGEN:355199","OMIM:602875","SCTID:718559000","UMLS:C1864356"],"synonyms":[{"name":"AMDM","type":"related"},{"name":"St. Helena dysplasia","type":"related"},{"name":"acromesomelic dwarfism Maroteux type","type":"related"},{"name":"acromesomelic dysplasia 1, Maroteaux type","type":"exact"},{"name":"acromesomelic dysplasia Maroteaux type","type":"related"},{"name":"acromesomelic dysplasia, Maroteaux type","type":"exact"}],"termid":"MONDO:0011275","xrefs":{"Monarch":{"xref_id":"0011275"}}}


id: GO:0090043
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of tubulin deacetylation. Tubulin deacetylation is the removal of an acetyl group from a protein amino acid.","definition_xrefs":["GOC:dph","GOC:tb","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein deacetylation","termid":"GO:0090311"},{"relation_name":"regulates","term_name":"tubulin deacetylation","termid":"GO:0090042"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of tubulin deacetylation","termid":"GO:0090043"}


id: PBO:0045046
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DKKL1 pseudogene 1","termid":"PBO:0045046"}


id: FYPO:0007616
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to diuron. Cells stop growing (and may die) at a concentration of diuron that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0002683","FYPO:0000139","FYPO:0005447","FYPO:0001985","FYPO:0000003"],"is_obsolete":false,"name":"sensitive to diuron","synonyms":[{"name":"sensitive to 3-(3,4-dichlorophenyl)-1,1-dimethylurea","type":"exact"},{"name":"sensitive to DCMU","type":"exact"},{"name":"sensitive to diuron during mitotic cell cycle","type":"related"},{"name":"sensitive to diuron during vegetative growth","type":"exact"}],"termid":"FYPO:0007616"}


id: MONDO:0013901
data:
  {"annotated_genes":["SJAG_00663"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87576],"is_not":false,"summary":null,"term":"MONDO:0013901"}]},"cv_name":"mondo","definition":"Any azoospermia in which the cause of the disease is a mutation in the SEPT12 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spermatogenic failure","termid":"MONDO:0004983"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00663":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"spermatogenic failure 10","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:18401","DOID:0070178","MEDGEN:766707","OMIM:614822","UMLS:C3553793"],"synonyms":[{"name":"SEPT12 azoospermia","type":"exact"},{"name":"SPGF10","type":"related"},{"name":"azoospermia caused by mutation in SEPT12","type":"exact"},{"name":"spermatogenic failure 10","type":"exact"},{"name":"spermatogenic failure type 10","type":"exact"},{"name":"spermatogenic failure with defective sperm annulus","type":"related"}],"termid":"MONDO:0013901","terms_by_termid":{"MONDO:0013901":null},"xrefs":{"Monarch":{"xref_id":"0013901"}}}


id: PBO:0075287
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin 29","termid":"PBO:0075287"}


id: MONDO:0020545
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Staphylococcal toxic shock syndrome (staphylococcal TSS) is an acute disease mediated by the production of superantigenic toxins, characterized by high fever, skin rash followed by skin peeling, hypotension, vomiting, diarrhea and potentially leading to multisystem organ failure and caused by a Staphylococcus aureus bacterial infection.","definition_xrefs":["Orphanet:99919"],"direct_ancestors":[{"relation_name":"is_a","term_name":"toxic shock syndrome","termid":"MONDO:0001881"},{"relation_name":"is_a","term_name":"staphylococcal toxemia","termid":"MONDO:0017592"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"staphylococcal toxic-shock syndrome","secondary_identifiers":["ICD9:040.89","GARD:19710","MedDRA:10044250","MEDGEN:811401","icd11.foundation:788554020","UMLS:C3714602","SCTID:240450004"],"synonyms":[{"name":"Staphylococcus caused toxic shock syndrome","type":"exact"},{"name":"Staphylococcus toxic shock syndrome","type":"exact"},{"name":"staphylococcal TSS","type":"exact"}],"termid":"MONDO:0020545","xrefs":{"Monarch":{"xref_id":"0020545"}}}


id: PBO:0017487
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-regulates","termid":"PBO:0017487"}


id: PBO:0110486
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PHF10 pseudogene 2","termid":"PBO:0110486"}


id: PBO:0090814
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial translation initiation factor Mti3","termid":"PBO:0090814"}


id: PBO:0083569
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps verified ORF KCC4","termid":"PBO:0083569"}


id: GO:0001742
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires the specialized features of an oenocyte. Oenocytes are large secretory cells found in clusters underlying the epidermis of larval abdominal segments.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"oenocyte differentiation","synonyms":[{"name":"oenocyte cell differentiation","type":"exact"}],"termid":"GO:0001742"}


id: PBO:0002693
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"replication termination factor Rtf1","termid":"PBO:0002693"}


id: PBO:0049281
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione synthetase","termid":"PBO:0049281"}


id: MONDO:1012887
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any syndromic congenital malformation characterized by reduced fetal growth, a short-spine, a long and narrow face, cardiac defects and heterotopy of the spiral colon that occurs in newborn cattle due to a mutation in the MAP2K2 gene.","definition_xrefs":["PMID:34209498"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"syndromic disease, non-human animal","termid":"MONDO:1011360"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"skeletal-cardio-enteric dysplasia, MAP2K2-related, cattle","secondary_identifiers":["OMIA:002381-9913"],"synonyms":[{"name":"skeletal-cardio-enteric dysplasia","type":"related"}],"termid":"MONDO:1012887","xrefs":{"Monarch":{"xref_id":"1012887"}}}


id: MONDO:0014294
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"15q11.2 microdeletion syndrome is a rare partial autosomal monosomy with a variable phenotypic expression and reduced penetrance associated with an increased susceptibility to neuropsychiatric or neurodevelopmental disorders including delayed psychomotor development, speech delay, autism spectrum disorder, attention deficit-hyperactivity disorder, obsessive-compulsive disorder, epilepsy or seizures. It may also include mild non-specific dysmorphic features (such as dysplastic ears, broad forehead, hypertelorism), cleft palate, neurological and neuroimaging abnormalities (such as ataxia and muscular hypotonia).","definition_xrefs":["Orphanet:261183"],"direct_ancestors":[{"relation_name":"is_a","term_name":"partial deletion of the long arm of chromosome 15","termid":"MONDO:0016913"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 15q11.2 deletion syndrome","secondary_identifiers":["MEDGEN:467404","OMIM:615656","GARD:10525","DOID:0060393","UMLS:C3180937"],"synonyms":[{"name":"15q11.2 BP1-BP2 microdeletion syndrome","type":"exact"},{"name":"15q11.2 microdeletion","type":"related"},{"name":"15q11.2 microdeletion syndrome","type":"exact"},{"name":"Del(15)(q11.2)","type":"exact"},{"name":"chromosome 15q11.2 deletion","type":"related"},{"name":"chromosome 15q11.2 deletion syndrome","type":"exact"},{"name":"chromosome 15q11.2 microdeletion","type":"related"},{"name":"monosomy 15q11.2","type":"exact"}],"termid":"MONDO:0014294","xrefs":{"Monarch":{"xref_id":"0014294"}}}


id: PBO:0043535
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"component of oligomeric golgi complex 3","termid":"PBO:0043535"}


id: GO:0033326
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of cerebrospinal fluid (CSF) from the choroid plexus of the lateral, third and fourth ventricles. The cerebrospinal fluid is a clear liquid that located within the ventricles, spinal canal, and subarachnoid spaces.","definition_xrefs":["PMID:10716451","GOC:ln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"body fluid secretion","termid":"GO:0007589"},{"relation_name":"is_a","term_name":"secretion by tissue","termid":"GO:0032941"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"cerebrospinal fluid secretion","synonyms":[{"name":"CSF secretion","type":"exact"}],"termid":"GO:0033326"}


id: MONDO:0012801
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autism, susceptiblity to","termid":"MONDO:0020836"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autism, susceptibility to, 15","secondary_identifiers":["OMIM:612100","UMLS:C2677504","MEDGEN:394302"],"synonyms":[{"name":"AUTS15","type":"related"},{"name":"autism susceptibility 15","type":"exact"},{"name":"autism, susceptibility to, 15","type":"exact"},{"name":"autism, susceptibility to, type 15","type":"exact"},{"name":"susceptibility to autism 15","type":"related"}],"termid":"MONDO:0012801","xrefs":{"Monarch":{"xref_id":"0012801"}}}


id: PR:O94256
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- set6 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94256"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SET domain and MYND-type zinc finger protein 6 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP8B7.07c","synonyms":[{"name":"Spom972h-set6","type":"exact"}],"termid":"PR:O94256"}


id: GO:0052206
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which an organism effects a change in the structure or function of a second organism, mediated by a substance secreted by a type II secretion system in the first organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete modification of morphology or physiology of other organism via protein secreted by type II secretion system involved in symbiotic interaction (obsolete GO:0052206)","synonyms":[{"name":"modification of morphology or physiology of other organism via protein secreted by type II secretion system during symbiotic interaction","type":"related"}],"termid":"GO:0052206"}


id: PBO:0012829
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-absent_during","termid":"PBO:0012829"}


id: PBO:0050088
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group AT-hook 1 pseudogene 8","termid":"PBO:0050088"}


id: GO:0099144
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the synaptic membrane consisting of the gene products that are tethered to the membrane only by a covalently attached anchor, such as a lipid group that is embedded in the membrane. Gene products with peptide sequences that are embedded in the membrane are excluded from this grouping.","definition_xrefs":["GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete anchored component of synaptic membrane (obsolete GO:0099144)","termid":"GO:0099144"}


id: PBO:0068707
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 88, pseudogene","termid":"PBO:0068707"}


id: PBO:0003092
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphogluconate dehydrogenase, decarboxylating","termid":"PBO:0003092"}


id: GO:1905513
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of short-term synaptic potentiation.","definition_xrefs":["GOC:TermGenie","GOC:hjd","GO_REF:0000058","PMID:15470145"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of biological process","termid":"GO:0048519"},{"relation_name":"is_a","term_name":"regulation of short-term synaptic potentiation","termid":"GO:1905512"},{"relation_name":"negatively_regulates","term_name":"short-term synaptic potentiation","termid":"GO:1990926"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of short-term synaptic potentiation","synonyms":[{"name":"down regulation of short-term synaptic potentiation","type":"exact"},{"name":"down regulation of synaptic facilitation","type":"exact"},{"name":"down-regulation of short-term synaptic potentiation","type":"exact"},{"name":"down-regulation of synaptic facilitation","type":"exact"},{"name":"downregulation of short-term synaptic potentiation","type":"exact"},{"name":"downregulation of synaptic facilitation","type":"exact"},{"name":"inhibition of short-term synaptic potentiation","type":"narrow"},{"name":"inhibition of synaptic facilitation","type":"narrow"},{"name":"negative regulation of synaptic facilitation","type":"exact"}],"termid":"GO:1905513"}


id: PBO:0051978
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"jade family PHD finger 1","termid":"PBO:0051978"}


id: GO:0047230
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: flavonol 3-O-D-glucoside + UDP-L-rhamnose = flavonol 3-O-L-rhamnosylglucoside + UDP.","definition_xrefs":["EC:2.4.1.159","MetaCyc:2.4.1.159-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glycosyltransferase activity","termid":"GO:0008194"},{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016757","GO:0016740"],"is_obsolete":false,"name":"flavonol-3-O-glucoside L-rhamnosyltransferase activity","secondary_identifiers":["RHEA:22528"],"synonyms":[{"name":"UDP-L-rhamnose:flavonol-3-O-D-glucoside 6''-O-L-rhamnosyltransferase activity","type":"related"},{"name":"UDP-rhamnose:flavonol 3-O-glucoside rhamnosyltransferase activity","type":"related"},{"name":"uridine diphosphorhamnose-flavonol 3-O-glucoside rhamnosyltransferase activity","type":"related"}],"termid":"GO:0047230"}


id: GO:0032604
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of granulocyte macrophage colony-stimulating factor due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:mah","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine production","termid":"GO:0001816"},{"relation_name":"is_a","term_name":"protein metabolic process","termid":"GO:0019538"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"granulocyte macrophage colony-stimulating factor production","secondary_identifiers":["GO:0042253"],"synonyms":[{"name":"GM-CSF production","type":"exact"},{"name":"granulocyte macrophage colony stimulating factor production","type":"exact"},{"name":"granulocyte macrophage colony-stimulating factor biosynthetic process","type":"narrow"}],"termid":"GO:0032604"}


id: GO:0021691
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A developmental process, independent of morphogenetic (shape) change, that is required for the cerebellar Purkinje cell layer to attain its fully functional state. The Purkinje cell layer lies just underneath the molecular layer of the cerebellar cortex. It contains the neuronal cell bodies of the Purkinje cells that are arranged side by side in a single layer. Candelabrum interneurons are vertically oriented between the Purkinje cells. Purkinje neurons are inhibitory and provide the output of the cerebellar cortex through axons that project into the white matter. Extensive dendritic trees from the Purkinje cells extend upward in a single plane into the molecular layer where they synapse with parallel fibers of granule cells.","definition_xrefs":["GOC:dgh","GOC:dph","ISBN:0838580343","GOC:jid","GOC:cls","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure maturation","termid":"GO:0071695"},{"relation_name":"part_of","term_name":"cerebellar Purkinje cell layer development","termid":"GO:0021680"},{"relation_name":"part_of","term_name":"cerebellar cortex maturation","termid":"GO:0021699"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cerebellar Purkinje cell layer maturation","termid":"GO:0021691"}


id: GO:0044738
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism negatively regulates the activity of a voltage-gated sodium channel in another organism.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of acid-sensing ion channel in another organism (obsolete GO:0044738)","synonyms":[{"name":"negative regulation of ASIC channel in other organism","type":"exact"},{"name":"negative regulation of acid-sensing ion channel in other organism","type":"exact"}],"termid":"GO:0044738"}


id: MONDO:0010111
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Odontotrichomelic syndrome is characterized by malformations of all four extremities, hypoplastic nails, ear anomalies, hypotrichosis, abnormal dentition, hyperhidrosis and nasolacrimal duct obstruction. So far, it has been described in less than 10 patients. Transmission is autosomal recessive.","definition_xrefs":["Orphanet:2723"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ectodermal dysplasia syndrome","termid":"MONDO:0019287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"odontotrichomelic syndrome","secondary_identifiers":["OMIM:273400","GARD:2381","UMLS:C2930960","icd11.foundation:1999951139","SCTID:239028001","MESH:C535637","MEDGEN:443944"],"synonyms":[{"name":"Freire-Maia odontotrichomelic syndrome","type":"exact"},{"name":"Freire-Maia syndrome","type":"exact"},{"name":"odontotrichomelic hypohidrotic dysplasia","type":"exact"},{"name":"odontotrichomelic syndrome","type":"exact"},{"name":"tetramelic deficiencies, ectodermal dysplasia, deformed ears, and other abnormalities","type":"exact"}],"termid":"MONDO:0010111","xrefs":{"Monarch":{"xref_id":"0010111"}}}


id: SO:0001532
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region recognized by a recombinase.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"specific_recombination_site","termid":"SO:0000299"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"recombination_signal_sequence","secondary_identifiers":["http://en.wikipedia.org/wiki/Recombination_Signal_Sequences"],"synonyms":[{"name":"recombination signal sequence","type":"related"}],"termid":"SO:0001532"}


id: GO:1990906
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cilium-like cell projection emanating from the inner segment and running alongside the outer segment of photoreceptors.","definition_xrefs":["GOC:dph","PMID:25125189"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron projection","termid":"GO:0043005"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"accessory outer segment","termid":"GO:1990906"}


id: MONDO:0030800
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"progressive familial intrahepatic cholestasis","termid":"MONDO:0015762"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002515"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0005066","MONDO:0002515"],"is_obsolete":false,"name":"cholestasis, progressive familial intrahepatic, 9","secondary_identifiers":["MEDGEN:1809292","OMIM:619849","UMLS:C5676973"],"synonyms":[{"name":"PFIC9","type":"exact"},{"name":"cholestasis, progressive familial intrahepatic, 9","type":"exact"}],"termid":"MONDO:0030800","xrefs":{"Monarch":{"xref_id":"0030800"}}}


id: MONDO:0009884
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"platelet prostacyclin receptor defect","secondary_identifiers":["MEDGEN:337912","MESH:C564884","OMIM:262875","UMLS:C1849774"],"synonyms":[{"name":"Vienna-Hietzing defect","type":"related"},{"name":"platelet prostacyclin receptor defect","type":"exact"}],"termid":"MONDO:0009884","xrefs":{"Monarch":{"xref_id":"0009884"}}}


id: PBO:0052275
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysine demethylase 5C","termid":"PBO:0052275"}


id: GO:1903390
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of synaptic vesicle uncoating.","definition_xrefs":["PMID:21563316","GOC:TermGenie","GOC:PARL","GO_REF:0000058","GOC:pad"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein depolymerization","termid":"GO:1901881"},{"relation_name":"is_a","term_name":"regulation of synaptic vesicle uncoating","termid":"GO:1903388"},{"relation_name":"positively_regulates","term_name":"synaptic vesicle uncoating","termid":"GO:0016191"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of synaptic vesicle uncoating","synonyms":[{"name":"activation of synaptic vesicle coat depolymerization","type":"narrow"},{"name":"activation of synaptic vesicle coat protein depolymerization","type":"narrow"},{"name":"activation of synaptic vesicle uncoating","type":"narrow"},{"name":"positive regulation of synaptic vesicle coat depolymerization","type":"exact"},{"name":"positive regulation of synaptic vesicle coat protein depolymerization","type":"exact"},{"name":"up regulation of synaptic vesicle coat depolymerization","type":"exact"},{"name":"up regulation of synaptic vesicle coat protein depolymerization","type":"exact"},{"name":"up regulation of synaptic vesicle uncoating","type":"exact"},{"name":"up-regulation of synaptic vesicle coat depolymerization","type":"exact"},{"name":"up-regulation of synaptic vesicle coat protein depolymerization","type":"exact"},{"name":"up-regulation of synaptic vesicle uncoating","type":"exact"},{"name":"upregulation of synaptic vesicle coat depolymerization","type":"exact"},{"name":"upregulation of synaptic vesicle coat protein depolymerization","type":"exact"},{"name":"upregulation of synaptic vesicle uncoating","type":"exact"}],"termid":"GO:1903390"}


id: GO:0102210
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + a rhamnogalacturonan type I = [rhamnogalacturonan I oligosaccharide]-alpha-L-rhamnose + 4-deoxy-4,5-unsaturated D-galactopyranosyluronate-[rhamnogalacturonan I oligosaccharide].","definition_xrefs":["GOC:pz","EC:4.2.2.23"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on polysaccharides","termid":"GO:0016837"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"rhamnogalacturonan endolyase activity","secondary_identifiers":["MetaCyc:RXN-12173"],"termid":"GO:0102210"}


id: PBO:0051559
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 11","termid":"PBO:0051559"}


id: GO:0009310
data:
  {"annotated_genes":["SJAG_03288"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[87765],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009447"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of any organic compound that is weakly basic in character and contains an amino or a substituted amino group. Amines are called primary, secondary, or tertiary according to whether one, two, or three carbon atoms are attached to the nitrogen atom.","definition_xrefs":["ISBN:0198506732","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catabolic process","termid":"GO:0009056"},{"relation_name":"is_a","term_name":"amine metabolic process","termid":"GO:0009308"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03288":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"amine catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"amine breakdown","type":"exact"},{"name":"amine catabolism","type":"exact"},{"name":"amine degradation","type":"exact"}],"termid":"GO:0009310","terms_by_termid":{"GO:0009447":null}}


id: GO:0003168
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires the specialized structural and/or functional features of a Purkinje myocyte (also known as cardiac Purkinje fiber cell). These cells are specialized cardiomyocytes that receive signals from the bundle of His and innervate the ventricular cardiac muscle.","definition_xrefs":["GOC:mtg_cardiac_conduct_nov11","GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"His-Purkinje system cell differentiation","termid":"GO:0060932"},{"relation_name":"part_of","term_name":"Purkinje myocyte development","termid":"GO:0003165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"Purkinje myocyte differentiation","synonyms":[{"name":"cardiac Purkinje fiber cell differentiation","type":"exact"}],"termid":"GO:0003168"}


id: SO:0000718
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A reading_frame that is interrupted by one or more stop codons; usually identified through inter-genomic sequence comparisons.","definition_xrefs":["SGD:rb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reading_frame","termid":"SO:0000717"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"blocked_reading_frame","synonyms":[{"name":"blocked reading frame","type":"exact"}],"termid":"SO:0000718"}


id: PBO:0005681
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chorismate synthase (predicted)","termid":"PBO:0005681"}


id: PBO:0030832
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cell_population_growth_during_iron_starvation","termid":"PBO:0030832"}


id: PBO:0041429
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 8 open reading frame 76","termid":"PBO:0041429"}


id: PBO:0066908
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 209","termid":"PBO:0066908"}


id: MONDO:0003270
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete ganglioglioma (obsolete MONDO:0003270)","termid":"MONDO:0003270","xrefs":{"Monarch":{"xref_id":"0003270"}}}


id: PBO:0055965
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 78, pseudogene","termid":"PBO:0055965"}


id: GO:0002349
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The synthesis or release of histamine following a stimulus as part of an inflammatory response, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["PMID:16730260","GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"production of molecular mediator involved in inflammatory response","termid":"GO:0002532"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"histamine production involved in inflammatory response","synonyms":[{"name":"histamine production involved in acute inflammatory response","type":"broad"}],"termid":"GO:0002349"}


id: PBO:0057720
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1302-5","termid":"PBO:0057720"}


id: GO:0021849
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The division of neuroblasts in the subventricular zone of the forebrain. The interneuron precursors that these cells give rise to include adult olfactory bulb interneurons and migrate tangentially.","definition_xrefs":["GOC:dph","GOC:jid","PMID:12626695","GOC:dgh","GO_REF:0000021","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuroblast division","termid":"GO:0055057"},{"relation_name":"part_of","term_name":"cell proliferation in forebrain","termid":"GO:0021846"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuroblast division in subventricular zone","termid":"GO:0021849"}


id: PBO:0066789
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 88","termid":"PBO:0066789"}


id: GO:0004222
data:
  {"annotated_genes":["SJAG_00730","SJAG_01321","SJAG_01430","SJAG_04533","SJAG_02809","SJAG_03648","SJAG_01816","SJAG_04514","SJAG_04641","SJAG_03393","SJAG_02397","SJAG_01004","SJAG_01838","SJAG_01179","SJAG_03396","SJAG_00406"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[60106,67251,69960,70254,70536,75324,76242,77117,77663,78027,78387,78576,97683,98666,108452,109576],"is_not":false,"summary":null,"term":"GO:0004222"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endopeptidase activity","termid":"GO:0004175"},{"relation_name":"is_a","term_name":"metallopeptidase activity","termid":"GO:0008237"}],"gene_count":16,"genes_by_uniquename":{"SJAG_00406":null,"SJAG_00730":null,"SJAG_01004":null,"SJAG_01179":null,"SJAG_01321":null,"SJAG_01430":null,"SJAG_01816":null,"SJAG_01838":null,"SJAG_02397":null,"SJAG_02809":null,"SJAG_03393":null,"SJAG_03396":null,"SJAG_03648":null,"SJAG_04514":null,"SJAG_04533":null,"SJAG_04641":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0008233"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0008233","GO:0016787","GO:0003674","GO:0003824","GO:0140096"],"is_obsolete":false,"name":"metalloendopeptidase activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-1474213","Reactome:R-HSA-194800","Reactome:R-HSA-9624272","Reactome:R-HSA-9840408","Reactome:R-HSA-5362793","Reactome:R-HSA-5250978","Reactome:R-HSA-8874201","Reactome:R-HSA-9844241","Reactome:R-HSA-1564169","Reactome:R-HSA-8867344","Reactome:R-HSA-2514790","Reactome:R-HSA-5250962","Reactome:R-HSA-1474196","Reactome:R-HSA-420818","Reactome:R-HSA-1564179","Reactome:R-HSA-1564143","Reactome:R-HSA-381518","Reactome:R-HSA-2485148","Reactome:R-HSA-3828025","Reactome:R-HSA-2484882","Reactome:R-HSA-5694082","Reactome:R-HSA-8940959","Reactome:R-HSA-6784620","Reactome:R-HSA-1592310","Reactome:R-HSA-8943959","Reactome:R-HSA-2022141","Reactome:R-HSA-3371385","Reactome:R-HSA-8877620","Reactome:R-HSA-9840564","Reactome:R-HSA-2179402","Reactome:R-HSA-264758","Reactome:R-HSA-8876868","Reactome:R-HSA-8949649","Reactome:R-HSA-1299476","Reactome:R-HSA-1458433","Reactome:R-HSA-194796","Reactome:R-HSA-1299478","Reactome:R-HSA-1564184","Reactome:R-HSA-194818","Reactome:R-HSA-2168982","Reactome:R-HSA-2534240","Reactome:R-HSA-1474210","Reactome:R-HSA-2533950","Reactome:R-HSA-381435","Reactome:R-HSA-5250606","Reactome:R-HSA-1454757","Reactome:R-HSA-1168777","Reactome:R-HSA-1564117","Reactome:R-HSA-2473594","Reactome:R-HSA-2533874","Reactome:R-HSA-3791295","Reactome:R-HSA-8940554","Reactome:R-HSA-2533944","Reactome:R-HSA-194808","Reactome:R-HSA-8874187","Reactome:R-HSA-1564120","Reactome:R-HSA-3791319","Reactome:R-HSA-3791155","Reactome:R-HSA-9824402","Reactome:R-HSA-2473596","Reactome:R-HSA-5250892","Reactome:R-HSA-8874122","Reactome:R-HSA-8940641","Reactome:R-HSA-8874194","Reactome:R-HSA-1564142","Reactome:R-HSA-2473584","Reactome:R-HSA-5333671","Reactome:R-HSA-3827958","Reactome:R-HSA-2002440","Reactome:R-HSA-1564164","Reactome:R-HSA-194809","Reactome:R-HSA-2485111","Reactome:R-HSA-1454822","Reactome:R-HSA-4224014","Reactome:R-HSA-3788075","Reactome:R-HSA-177946","Reactome:R-HSA-1564112","Reactome:R-HSA-2002428","Reactome:R-HSA-2534248","Reactome:R-HSA-2533965","Reactome:R-HSA-2533970","Reactome:R-HSA-2514831","Reactome:R-HSA-181567","Reactome:R-HSA-2537499","Reactome:R-HSA-2168046","Reactome:R-HSA-3791149","Reactome:R-HSA-8874195","Reactome:R-HSA-8940561","Reactome:R-HSA-8949659","Reactome:R-HSA-8949668","Reactome:R-HSA-8942302","Reactome:R-HSA-9822532","Reactome:R-HSA-9840532","EC:3.4.24.-","Reactome:R-HSA-1655851","Reactome:R-HSA-194793","Reactome:R-HSA-8874192","Reactome:R-HSA-1251992","Reactome:R-HSA-381537","Reactome:R-HSA-4086205","Reactome:R-HSA-5228578"],"synonyms":[{"name":"metalloendoprotease activity","type":"narrow"},{"name":"metalloendoproteinase activity","type":"narrow"}],"termid":"GO:0004222","terms_by_termid":{"GO:0004222":null}}


id: GO:0034020
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: all-trans-violaxanthin = all-trans-neoxanthin.","definition_xrefs":["EC:5.3.99.9","RHEA:10128"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity","termid":"GO:0016860"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016853","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"neoxanthin synthase activity","secondary_identifiers":["MetaCyc:RXN1F-155","KEGG_REACTION:R06948"],"synonyms":[{"name":"NSY","type":"related"},{"name":"violaxanthin-neoxanthin isomerase (epoxide-opening) activity","type":"related"}],"termid":"GO:0034020"}


id: PBO:0053806
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1065","termid":"PBO:0053806"}


id: PBO:0061954
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily A member 7","termid":"PBO:0061954"}


id: MONDO:0011161
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sperm-specific antigen 1","secondary_identifiers":["UMLS:C1420425","MEDGEN:244171","OMIM:601876"],"synonyms":[{"name":"SSFA1","type":"related"},{"name":"fertilisation antigen 1","type":"related"},{"name":"fertilization antigen 1","type":"related"},{"name":"sperm-specific antigen 1","type":"exact"},{"name":"sperm-specific antigen type 1","type":"exact"}],"termid":"MONDO:0011161","xrefs":{"Monarch":{"xref_id":"0011161"}}}


id: PBO:0087620
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the Cop9 signalosome; which is required for deneddylation, or removal of the ubiquitin-like protein Rub1p from Cdc53p (cullin); involved in adaptation to pheromone signaling; functional equivalent of canonical Csn6 subunit of the COP9 signalosome","termid":"PBO:0087620"}


id: GO:0006732
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving coenzymes, any of various nonprotein organic cofactors that are required, in addition to an enzyme and a substrate, for an enzymatic reaction to proceed.","definition_xrefs":["ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete coenzyme metabolic process (obsolete GO:0006732)","synonyms":[{"name":"coenzyme and prosthetic group metabolic process","type":"broad"},{"name":"coenzyme and prosthetic group metabolism","type":"broad"},{"name":"coenzyme metabolism","type":"exact"},{"name":"group transfer coenzyme metabolic process","type":"narrow"},{"name":"group transfer coenzyme metabolism","type":"narrow"}],"termid":"GO:0006732"}


id: PBO:0067243
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 316, pseudogene","termid":"PBO:0067243"}


id: PBO:0108708
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H4 chaperone, CENP-A recruiting complex CENP-A chaperone Mis16","termid":"PBO:0108708"}


id: PR:000050534
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A histone H4, hhf2 gene translation product (Schizosaccharomyces pombe) that has had the initiator methionine removed and that has been trimethylated at the position equivalent to Lys-21 of the amino acid sequence represented by UniProtKB:P09322. UniProtKB:P09322, 2-103, Lys-21, MOD:00083.","definition_xrefs":["PMID:22150589","PomBase:VW","PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H4, hhf2 gene translation product (Schizosaccharomyces pombe)","termid":"PR:000050527"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hhf2/Me3(K20)","pombase_gene_id":"SPBC8D2.03c","synonyms":[{"name":"PRO_0000158357, Lys-21, MOD:00083","type":"exact"},{"name":"PomBase_original_PRO_term_name: histone H4, hhf2 gene translation product, initiator methionine removed trimethylated 1 (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-hhf2/InitMet-/Me3:1","type":"exact"},{"name":"UniProtKB:P09322, 2-103, Lys-21, MOD:00083","type":"broad"},{"name":"hhf2/Me3(K20)","type":"exact"},{"name":"histone H4 K20me3 (Schizosaccharomyces pombe)","type":"broad"},{"name":"histone H4 hhf2 K20me3 (Schizosaccharomyces pombe)","type":"exact"}],"termid":"PR:000050534"}


id: GO:0042159
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of any conjugated, water-soluble protein in which the covalently attached nonprotein group consists of a lipid or lipids.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein catabolic process","termid":"GO:0030163"},{"relation_name":"is_a","term_name":"lipoprotein metabolic process","termid":"GO:0042157"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030163"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0030163","GO:0008150"],"is_obsolete":false,"name":"lipoprotein catabolic process","synonyms":[{"name":"lipoprotein breakdown","type":"exact"},{"name":"lipoprotein catabolism","type":"exact"},{"name":"lipoprotein degradation","type":"exact"}],"termid":"GO:0042159"}


id: PBO:0000452
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"palmitoyltransferase Akr1 (predicted)","termid":"PBO:0000452"}


id: PBO:0066917
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 219","termid":"PBO:0066917"}


id: PBO:0047593
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibrinogen like 2","termid":"PBO:0047593"}


id: PBO:0034421
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-regulates_morphogenesis_of","termid":"PBO:0034421"}


id: MONDO:0006528
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A bacteria-induced exanthem","definition_xrefs":["EFO:1000671"],"direct_ancestors":[{"relation_name":"is_a","term_name":"exanthem","termid":"MONDO:0006547"},{"relation_name":"is_a","term_name":"skin disease caused by bacterial infection","termid":"MONDO:0024295"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"bacterial exanthem","secondary_identifiers":["DOID:0050487"],"termid":"MONDO:0006528","xrefs":{"Monarch":{"xref_id":"0006528"}}}


id: PBO:0028144
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_cell_population_growth_on_glycerol/ethanol_carbon_source","termid":"PBO:0028144"}


id: PBO:0060116
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND6 pseudogene 17","termid":"PBO:0060116"}


id: GO:0060437
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The increase in size or mass of a lung. In all air-breathing vertebrates the lungs are developed from the ventral wall of the oesophagus as a pouch which divides into two sacs. In amphibians and many reptiles the lungs retain very nearly this primitive sac-like character, but in the higher forms the connection with the esophagus becomes elongated into the windpipe and the inner walls of the sacs become more and more divided, until, in the mammals, the air spaces become minutely divided into tubes ending in small air cells, in the walls of which the blood circulates in a fine network of capillaries. In mammals the lungs are more or less divided into lobes, and each lung occupies a separate cavity in the thorax.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organ growth","termid":"GO:0035265"},{"relation_name":"part_of","term_name":"lung development","termid":"GO:0030324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lung growth","termid":"GO:0060437"}


id: GO:0035779
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires the specialized structural and/or functional features of an angioblast cell. Angioblasts are one of the two products formed from hemangioblast cells (the other being pluripotent hemopoietic stem cells).","definition_xrefs":["GOC:yaf","CL:0000566"],"direct_ancestors":[{"relation_name":"is_a","term_name":"stem cell differentiation","termid":"GO:0048863"},{"relation_name":"part_of","term_name":"blood vessel development","termid":"GO:0001568"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"angioblast cell differentiation","synonyms":[{"name":"angioblastic mesenchymal cell differentiation","type":"exact"}],"termid":"GO:0035779"}


id: GO:0061278
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of epithelial cells within a renal tubule that contributes to mesonephric nephron tubule morphogenesis.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell migration involved in nephron tubule morphogenesis","termid":"GO:0072155"},{"relation_name":"part_of","term_name":"mesonephric nephron tubule morphogenesis","termid":"GO:0061240"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epithelial cell migration involved in mesonephric nephron tubule morphogenesis","termid":"GO:0061278"}


id: PR:Q09916
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An ATP-dependent RNA helicase DDX18 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01748","PANTHER:PTHR24031:SF23","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase has1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1F7.02c","secondary_identifiers":["UniProtKB:Q09916"],"synonyms":[{"name":"Spom972h-DDX18","type":"exact"}],"termid":"PR:Q09916"}


id: SO:0000601
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000601 edited_by_G_addition (obsolete SO:0000601)","termid":"SO:0000601"}


id: PBO:0040050
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARPC1B pseudogene 1","termid":"PBO:0040050"}


id: MONDO:0014732
data:
  {"annotated_genes":["SJAG_04966","SJAG_01772"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86310,86311],"is_not":false,"summary":null,"term":"MONDO:0014732"}]},"cv_name":"mondo","definition":"Any leukodystrophy in which the cause of the disease is a mutation in the VPS11 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"leukodystrophy","termid":"MONDO:0019046"},{"relation_name":"is_a","term_name":"VPS11-related neurological disorder","termid":"MONDO:0100617"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01772":null,"SJAG_04966":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"hypomyelinating leukodystrophy 12","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:17837","OMIM:616683","DOID:0060796","MEDGEN:905068","Orphanet:466934","UMLS:C4225247"],"synonyms":[{"name":"HLD12","type":"exact"},{"name":"VPS11 leukodystrophy","type":"exact"},{"name":"VPS11-related autosomal recessive hypomyelinating leukodystrophy","type":"related"},{"name":"VPS11-related autosomal recessive hypomyelinating leukoencephalopathy","type":"exact"},{"name":"hypomyelinating leukodystrophy type 12","type":"exact"},{"name":"leukodystrophy caused by mutation in VPS11","type":"exact"},{"name":"leukodystrophy, hypomyelinating, 12","type":"exact"},{"name":"leukodystrophy, hypomyelinating, type 12","type":"exact"}],"termid":"MONDO:0014732","terms_by_termid":{"MONDO:0014732":null},"xrefs":{"Monarch":{"xref_id":"0014732"}}}


id: PBO:0041483
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 11 open reading frame 96","termid":"PBO:0041483"}


id: SO:1000014
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A substitution of a purine, A or G, for another purine.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transition","termid":"SO:1000009"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"purine_transition","synonyms":[{"name":"purine transition","type":"exact"}],"termid":"SO:1000014"}


id: SO:0001025
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant that is segregating in one or more natural populations of a species.","definition_xrefs":["SO:immuno_workshop"],"direct_ancestors":[{"relation_name":"is_a","term_name":"allele","termid":"SO:0001023"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polymorphic_sequence_variant","synonyms":[{"name":"polymorphic sequence variant","type":"exact"}],"termid":"SO:0001025"}


id: GO:0014003
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process aimed at the progression of an oligodendrocyte over time, from initial commitment of the cell to a specific fate, to the fully functional differentiated cell. An oligodendrocyte is a type of glial cell involved in myelinating the axons in the central nervous system.","definition_xrefs":["GOC:dgh","GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glial cell development","termid":"GO:0021782"},{"relation_name":"part_of","term_name":"oligodendrocyte differentiation","termid":"GO:0048709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"oligodendrocyte development","synonyms":[{"name":"oligodendrocyte cell development","type":"exact"}],"termid":"GO:0014003"}


id: PBO:0079455
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tumor suppressor candidate 8","termid":"PBO:0079455"}


id: GO:0010585
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The controlled release of glutamine by a cell.","definition_xrefs":["PMID:15208395"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glutamine transport","termid":"GO:0006868"},{"relation_name":"is_a","term_name":"secretion by cell","termid":"GO:0032940"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"glutamine secretion","termid":"GO:0010585"}


id: FYPO:0002791
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a cell contains more, but smaller, vacuoles than normal when the population in which the cell is found is in stationary phase.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"small vacuoles during stationary phase","termid":"FYPO:0002789"},{"relation_name":"has_part","term_name":"lipid droplets present in spore cytoplasm in decreased numbers, mislocalized to ascus epiplasm","termid":"FYPO:0006053"},{"relation_name":"is_a","term_name":"small vacuoles present in increased numbers","termid":"FYPO:0002258"},{"relation_name":"is_a","term_name":"small vacuoles during stationary phase","termid":"FYPO:0002789"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"small vacuoles present in increased numbers during stationary phase","synonyms":[{"name":"fragmented vacuoles during stationary phase","type":"related"},{"name":"small vacuoles present in greater numbers during stationary phase","type":"exact"},{"name":"vacuoles present in increased numbers, with decreased vacuole size, during stationary phase","type":"exact"}],"termid":"FYPO:0002791"}


id: PATO:0000122
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A 1-D extent quality which is equal to the distance between two points.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"1-D extent","termid":"PATO:0001708"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"length","termid":"PATO:0000122"}


id: PBO:0044627
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DCHS1 antisense RNA 1","termid":"PBO:0044627"}


id: SO:0000319
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"In mRNA, a set of three nucleotides that indicates the end of information for protein synthesis.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"codon","termid":"SO:0000360"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stop_codon","secondary_identifiers":["http://en.wikipedia.org/wiki/Stop_codon"],"synonyms":[{"name":"stop codon","type":"exact"}],"termid":"SO:0000319"}


id: FYPO:0002545
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of serine residues three positions C-terminal to arginine residues (i.e. in Arg-X-X-Ser, or RxxS, sequences) does not occur during a cellular response to hydroxyurea.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete abolished protein serine phosphorylation at RxxS site during cellular response to hydroxyurea (obsolete FYPO:0002545)","synonyms":[{"name":"abolished protein serine phosphorylation at Arg-X-X-Ser site during cellular response to hydroxyurea","type":"exact"},{"name":"abolished protein serine phosphorylation at PAS site during cellular response to hydroxyurea","type":"exact"},{"name":"abolished protein serine phosphorylation at RxxS site during cellular response to HU","type":"exact"},{"name":"abolished protein serine phosphorylation at RxxS site during cellular response to hydroxyurea during mitotic cell cycle","type":"related"},{"name":"abolished protein serine phosphorylation at RxxS site during cellular response to hydroxyurea during vegetative growth","type":"exact"},{"name":"abolished protein serine phosphorylation at arginine-X-X-serine site during cellular response to hydroxyurea","type":"exact"},{"name":"abolished protein serine phosphorylation at phospho-Akt site during cellular response to hydroxyurea","type":"exact"},{"name":"protein serine phosphorylation abolished at RxxS site during cellular response to hydroxyurea","type":"exact"}],"termid":"FYPO:0002545"}


id: MONDO:0007647
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gastric volvulus, intrathoracic","secondary_identifiers":["MEDGEN:338155","MESH:C564989","UMLS:C1850902","OMIM:137210"],"synonyms":[{"name":"gastric volvulus, intrathoracic","type":"exact"}],"termid":"MONDO:0007647","xrefs":{"Monarch":{"xref_id":"0007647"}}}


id: GO:0015924
data:
  {"annotated_genes":["SJAG_01858","SJAG_03032"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[67152,79170],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004571"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of the terminal alpha-D-mannose residues in oligo-mannose oligosaccharides.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-mannosidase activity","termid":"GO:0004559"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01858":null,"SJAG_03032":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016798","GO:0003674","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"mannosyl-oligosaccharide mannosidase activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null},"termid":"GO:0015924","terms_by_termid":{"GO:0004571":null}}


id: RO:0002592
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"p results in organization of c iff p results in the assembly, arrangement of constituent parts, or disassembly of c","direct_ancestors":[{"relation_name":"is_a","term_name":"has_participant","termid":"RO:0000057"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"results_in_organization_of","termid":"RO:0002592"}


id: GO:0000341
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to the trimethylguanosine (m(3)(2,2,7)-GTP) group located at the 5' end of some RNA molecules. Such trimethylated cap structures, generally produced by posttranscriptional modification of a 7-methylguanosine cap, are often found on snRNAs and snoRNAs transcribed by RNA polymerase II, but have also be found on snRNAs transcribed by RNA polymerase III. They have also been found on a subset of the mRNA population in some species, e.g. C. elegans.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA cap binding","termid":"GO:0000339"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003723","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"RNA trimethylguanosine cap binding","synonyms":[{"name":"RNA m2,2,7G cap binding","type":"exact"}],"termid":"GO:0000341"}


id: MONDO:0019388
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"PELVIS is an acronym defining the association of Perineal hemangioma, External genitalia malformations, Lipomyelomeningocele, Vesicorenal abnormalities, Imperforate anus, and Skin tag. Eleven cases have been reported.","definition_xrefs":["Orphanet:83628"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"},{"relation_name":"is_a","term_name":"vascular neoplasm","termid":"MONDO:0024296"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pelvis syndrome","secondary_identifiers":["icd11.foundation:1311821224","MEDGEN:1374037","UMLS:C4510867","SCTID:725138002","GARD:19045"],"synonyms":[{"name":"LUMBAR syndrome","type":"exact"},{"name":"Lower body hemangioma-urogenital anomalies-myelopathy-bony deformities-anorectal and arterial malformations-renal anomalies syndrome","type":"exact"},{"name":"SACRAL syndrome","type":"exact"},{"name":"perineal hemangioma-external genitalia malformations-lipomyelomeningocele-vesicorenal abnormalities-imperforate anus syndrome","type":"exact"},{"name":"urorectal septum malformation sequence","type":"exact"}],"termid":"MONDO:0019388","xrefs":{"Monarch":{"xref_id":"0019388"}}}


id: PBO:0053242
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LHFPL tetraspan subfamily member 6","termid":"PBO:0053242"}


id: MONDO:0011412
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neurodegenerative disease that is characterized by intraneuronal inclusions of mutant neuroserpin resulting in progressive encephalopathy, dementia and seizures and has material basis in a mutation in the SERPINI1 gene inherited in an in autosomal dominant pattern.","definition_xrefs":["DOID:0050831"],"direct_ancestors":[{"relation_name":"is_a","term_name":"progressive myoclonus epilepsy","termid":"MONDO:0020074"},{"relation_name":"is_a","term_name":"Mendelian encephalopathy","termid":"MONDO:0100198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"familial encephalopathy with neuroserpin inclusion bodies","secondary_identifiers":["icd11.foundation:453919434","MEDGEN:346965","SCTID:702421006","Orphanet:85110","OMIM:604218","MESH:C536841","NORD:1123","GARD:10037","UMLS:C1858680","ICD9:348.39"],"synonyms":[{"name":"FENIB","type":"exact"},{"name":"encephalopathy, familial, with Collins bodies","type":"related"},{"name":"encephalopathy, familial, with neuroserpin inclusion bodies","type":"related"}],"termid":"MONDO:0011412","xrefs":{"Monarch":{"xref_id":"0011412"}}}


id: GO:0051150
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of smooth muscle cell differentiation.","definition_xrefs":["CL:0000192","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of muscle cell differentiation","termid":"GO:0051147"},{"relation_name":"regulates","term_name":"smooth muscle cell differentiation","termid":"GO:0051145"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of smooth muscle cell differentiation","termid":"GO:0051150"}


id: PBO:0086262
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that regulates signaling from G protein beta subunit Ste4p; contributes to relocalization of Ste4p within the cell; specific to a-cells and induced by alpha-factor","termid":"PBO:0086262"}


id: PBO:0067075
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 106, pseudogene","termid":"PBO:0067075"}


id: PBO:0050828
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydroxylysine kinase","termid":"PBO:0050828"}


id: PBO:0062614
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 10 subfamily V member 2 pseudogene","termid":"PBO:0062614"}


id: GO:0050457
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + lauroyl-CoA + oxaloacetate = (2S,3S)-2-hydroxytridecane-1,2,3-tricarboxylate + CoA + H+.","definition_xrefs":["RHEA:16605"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, acyl groups converted into alkyl on transfer","termid":"GO:0046912"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016746","GO:0003824"],"is_obsolete":false,"name":"decylcitrate synthase activity","secondary_identifiers":["KEGG_REACTION:R03735","EC:2.3.3.2","MetaCyc:DECYLCITRATE-SYNTHASE-RXN"],"synonyms":[{"name":"(2S,3S)-2-hydroxytridecane-1,2,3-tricarboxylate oxaloacetate-lyase (CoA- acylating) activity","type":"related"},{"name":"(2S,3S)-2-hydroxytridecane-1,2,3-tricarboxylate oxaloacetate-lyase (CoA-acylating)","type":"related"},{"name":"2-decylcitrate synthase activity","type":"related"},{"name":"dodecanoyl-CoA:oxaloacetate C-dodecanoyltransferase (thioester-hydrolysing, 1-carboxyundecyl-forming)","type":"related"}],"termid":"GO:0050457"}


id: GO:0036056
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A specialized cell-cell junction found between the cells of the excretory system, which provides a barrier for filtration of blood or hemolymph.","definition_xrefs":["GOC:mtg_kidney_jan10","GOC:sart","PMID:18971929"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell junction","termid":"GO:0005911"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"filtration diaphragm","termid":"GO:0036056"}


id: PBO:0060735
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase complex assembly factor 4","termid":"PBO:0060735"}


id: GO:0044104
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2,5-dioxopentanoate + NAD+ + H2O = 2-oxoglutarate + NADH + H+.","definition_xrefs":["PMID:16835232","PMID:17202142"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor","termid":"GO:0016620"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"2,5-dioxovalerate dehydrogenase (NAD+) activity","synonyms":[{"name":"2,5-dioxopentanoate dehydrogenase (NAD+) activity","type":"exact"},{"name":"2,5-dioxopentanoate:NAD+ 5-oxidoreductase activity","type":"exact"}],"termid":"GO:0044104"}


id: PBO:0081961
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zona pellucida binding protein","termid":"PBO:0081961"}


id: GO:0043509
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A nonsteroidal regulator, composed of two covalently linked inhibin beta-A subunits (sometimes known as activin beta-A or activin/inhibin beta-A).","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"activin complex","termid":"GO:0048180"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005576"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005576"],"is_obsolete":false,"name":"activin A complex","secondary_identifiers":["GO:0048181"],"termid":"GO:0043509"}


id: PBO:0065168
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline dehydrogenase 1","termid":"PBO:0065168"}


id: GO:0010029
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of seed germination.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of seedling development","termid":"GO:1900140"},{"relation_name":"regulates","term_name":"seed germination","termid":"GO:0009845"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of seed germination","termid":"GO:0010029"}


id: PBO:0079557
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBA domain containing 1","termid":"PBO:0079557"}


id: PBO:0063499
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDLIM7 antisense RNA 1","termid":"PBO:0063499"}


id: FYPO:0003897
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An abnormal intracellular mitochondrion distribution phenotype observed in the vegetative growth phase of the life cycle in which mitochondria cluster together more than normal during a cellular response to reactive oxygen species.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial aggregation","termid":"FYPO:0000895"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000138","FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"mitochondrial aggregation during cellular response to reactive oxygen species","synonyms":[{"name":"aggregated mitochondria during cellular response to reactive oxygen species","type":"narrow"},{"name":"mitochondrial aggregation at cell end during cellular response to reactive oxygen species","type":"related"},{"name":"mitochondrial aggregation at cell tip during cellular response to reactive oxygen species","type":"related"},{"name":"mitochondrial aggregation during cellular response to ROS","type":"exact"},{"name":"mitochondrial aggregation during cellular response to reactive oxygen species during mitotic cell cycle","type":"related"},{"name":"mitochondrial aggregation during cellular response to reactive oxygen species during vegetative growth","type":"exact"}],"termid":"FYPO:0003897"}


id: GO:0006505
data:
  {"annotated_genes":["SJAG_05327","SJAG_01416","SJAG_04337","SJAG_02488","SJAG_02776","SJAG_04924","SJAG_00068","SJAG_02913","SJAG_03801","SJAG_00295","SJAG_00506","SJAG_06383","SJAG_06425","SJAG_00846","SJAG_04119","SJAG_00831","SJAG_03115","SJAG_03878","SJAG_03672","SJAG_04975","SJAG_03066","SJAG_01860","SJAG_03506","SJAG_03292","SJAG_04165","SJAG_04881","SJAG_05278","SJAG_01570","SJAG_01227","SJAG_02804","SJAG_02523"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[63395,73522,75344,76837,93360,57895,78243,63789,62740,73115,76821,60813,58357,75939,73895,72218,58253,75910,77853,78030,70238,78604,77861,78269,104135,89916,77532,87793,104073,58367],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006506"},{"annotations":[74131],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006676"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving glycosylphosphatidylinositol anchors, molecular mechanisms for attaching membrane proteins to the lipid bilayer of cell membranes. Structurally they consist of a molecule of phosphatidylinositol to which is linked, via the C-6 hydroxyl of the inositol, a carbohydrate chain. This chain is in turn linked to the protein through an ethanolamine phosphate group, the amino group of which is in amide linkage with the C-terminal carboxyl of the protein chain, the phosphate group being esterified to the C-6 hydroxyl of the terminal mannose of the core carbohydrate chain.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycolipid metabolic process","termid":"GO:0006664"},{"relation_name":"is_a","term_name":"phosphatidylinositol metabolic process","termid":"GO:0046488"}],"gene_count":31,"genes_by_uniquename":{"SJAG_00068":null,"SJAG_00295":null,"SJAG_00506":null,"SJAG_00831":null,"SJAG_00846":null,"SJAG_01227":null,"SJAG_01416":null,"SJAG_01570":null,"SJAG_01860":null,"SJAG_02488":null,"SJAG_02523":null,"SJAG_02776":null,"SJAG_02804":null,"SJAG_02913":null,"SJAG_03066":null,"SJAG_03115":null,"SJAG_03292":null,"SJAG_03506":null,"SJAG_03672":null,"SJAG_03801":null,"SJAG_03878":null,"SJAG_04119":null,"SJAG_04165":null,"SJAG_04337":null,"SJAG_04881":null,"SJAG_04924":null,"SJAG_04975":null,"SJAG_05278":null,"SJAG_05327":null,"SJAG_06383":null,"SJAG_06425":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"GPI anchor metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0046472"],"synonyms":[{"name":"GPI anchor metabolism","type":"exact"},{"name":"GPI/GSI anchor metabolic process","type":"broad"},{"name":"GPI/GSI anchor metabolism","type":"broad"},{"name":"glycosylphosphatidylinositol metabolic process","type":"exact"},{"name":"glycosylphosphatidylinositol metabolism","type":"exact"}],"termid":"GO:0006505","terms_by_termid":{"GO:0006506":null,"GO:0006676":null}}


id: PBO:0003256
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial dynamin family fusion GTPase protein (predicted)","termid":"PBO:0003256"}


id: MONDO:0004481
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A pancreatic intraductal papillary mucinous neoplasm characterized by the presence of a focal or multifocal invasive carcinomatous component. The invasive carcinoma is either colloid or ductal adenocarcinoma.","definition_xrefs":["NCIT:C5726"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pancreatic intraductal papillary-mucinous carcinoma","termid":"MONDO:0004285"},{"relation_name":"is_a","term_name":"pancreatic intraductal papillary-mucinous neoplasm","termid":"MONDO:0004286"},{"relation_name":"is_a","term_name":"pancreatic adenocarcinoma","termid":"MONDO:0006047"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"pancreatic intraductal papillary-mucinous neoplasm with an associated invasive carcinoma","secondary_identifiers":["MEDGEN:275329","DOID:8150","UMLS:C1518871","ICDO:8453/3"],"synonyms":[{"name":"pancreatic intraductal papillary mucinous neoplasm with an associated invasive carcinoma","type":"exact"},{"name":"pancreatic intraductal papillary-mucinous neoplasm with an associated invasive carcinoma","type":"exact"},{"name":"pancreatic invasive intraductal papillary-mucinous carcinoma","type":"exact"}],"termid":"MONDO:0004481","xrefs":{"Monarch":{"xref_id":"0004481"}}}


id: PBO:0089430
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human thyroid receptor interacting protein homolog, transcription coactivator","termid":"PBO:0089430"}


id: PBO:0000288
data:
  {"annotation_feature_type":"gene","cv_name":"sequence_feature","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil","termid":"PBO:0000288"}


id: PBO:0003251
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar protein Vac8 (predicted)","termid":"PBO:0003251"}


id: PATO:0002240
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A convex 3-D shape quality inhering in a bearer by virtue of the bearer's shape resembling falling drop.","definition_xrefs":["url:wordnetweb.princeton.edu/perl/webwn"],"direct_ancestors":[{"relation_name":"is_a","term_name":"convex 3-D shape","termid":"PATO:0002007"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"teardrop-shaped","synonyms":[{"name":"drop shaped","type":"exact"}],"termid":"PATO:0002240"}


id: MONDO:0014784
data:
  {"annotated_genes":["SJAG_04500"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86145],"is_not":false,"summary":null,"term":"MONDO:0014784"}]},"cv_name":"mondo","definition":"Severe hypotonia-psychomotor developmental delay-strabismus-cardiac septal defect syndrome is a rare, genetic, non-dystrophic congenital myopathy disorder characterized by a neonatal-onset of severe generalized hypotonia associated with mild psychomotor delay, congenital strabismus with abducens nerve palsy, and atrial and/or ventricular septal defects. Cryptorchidism is commonly reported in male patients and muscle biopsy typically reveals increased variability in muscle fiber size.","definition_xrefs":["Orphanet:467176"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete neuro-ophthalmological disease (obsolete MONDO:0015368)","termid":"MONDO:0015368"},{"relation_name":"is_a","term_name":"congenital myopathy","termid":"MONDO:0019952"},{"relation_name":"is_a","term_name":"cardiogenetic disease","termid":"MONDO:0100547"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04500":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005336","MONDO:0005267"],"is_obsolete":false,"name":"severe hypotonia-psychomotor developmental delay-strabismus-cardiac septal defect syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:17840","UMLS:C4225196","MEDGEN:902080","OMIM:616816"],"synonyms":[{"name":"IHPMR","type":"exact"},{"name":"hypotonia, infantile, with psychomotor retardation","type":"exact"}],"termid":"MONDO:0014784","terms_by_termid":{"MONDO:0014784":null},"xrefs":{"Monarch":{"xref_id":"0014784"}}}


id: PBO:0003445
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Gtr1/RagA G protein Gtr1 (predicted)","termid":"PBO:0003445"}


id: PBO:0041153
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"basic transcription factor 3 pseudogene 8","termid":"PBO:0041153"}


id: MONDO:0035882
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"pregnancy disorder","termid":"MONDO:0024575"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chronic intervillositis of unknown etiology","secondary_identifiers":["MEDGEN:1842235","GARD:22443","UMLS:C5680386","Orphanet:615970"],"synonyms":[{"name":"CIUE","type":"exact"}],"termid":"MONDO:0035882","xrefs":{"Monarch":{"xref_id":"0035882"}}}


id: MONDO:0003381
data:
  {"annotated_genes":["SJAG_03429"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87097],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009050"}]},"cv_name":"mondo","definition":"A disease involving the pituitary gland.","direct_ancestors":[{"relation_name":"is_a","term_name":"reproductive system disorder","termid":"MONDO:0005039"},{"relation_name":"is_a","term_name":"endocrine system disorder","termid":"MONDO:0005151"},{"relation_name":"is_a","term_name":"brain disorder","termid":"MONDO:0005560"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03429":null},"genotype_count":0,"is_obsolete":false,"name":"pituitary gland disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["EFO:0009607","NCIT:C26854","DOID:53","ICD9:253.1","MESH:D010900","SCTID:399244003","ICD9:253.8","UMLS:C0032002","MEDGEN:45934","ICD9:253.9"],"synonyms":[{"name":"disease of pituitary gland","type":"exact"},{"name":"disease or disorder of pituitary gland","type":"exact"},{"name":"disorder of pituitary gland","type":"exact"},{"name":"pituitary disease","type":"exact"},{"name":"pituitary gland disease","type":"exact"},{"name":"pituitary gland disease or disorder","type":"exact"},{"name":"pituitary gland disorder","type":"exact"}],"termid":"MONDO:0003381","terms_by_termid":{"MONDO:0009050":null},"xrefs":{"Monarch":{"xref_id":"0003381"}}}


id: GO:0008684
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-hydroxy-2-oxopentanoate = 2-oxopent-4-enoate + H2O.","definition_xrefs":["EC:4.2.1.80"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"2-oxopent-4-enoate hydratase activity","secondary_identifiers":["RHEA:22580","GO:0018821","MetaCyc:2-OXOPENT-4-ENOATE-HYDRATASE-RXN","UM-BBD_enzymeID:r0101"],"synonyms":[{"name":"2-keto-4-pentenoate (vinylpyruvate)hydratase activity","type":"related"},{"name":"2-keto-4-pentenoate hydratase activity","type":"related"},{"name":"4-hydroxy-2-oxopentanoate hydro-lyase (2-oxopent-4-enoate-forming)","type":"related"},{"name":"4-hydroxy-2-oxopentanoate hydro-lyase activity","type":"related"},{"name":"OEH activity","type":"related"}],"termid":"GO:0008684"}


id: GO:0005211
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete plasma glycoprotein (obsolete GO:0005211)","synonyms":[{"name":"plasma glycoprotein","type":"exact"}],"termid":"GO:0005211"}


id: MONDO:0011942
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"systemic lupus erythematosus with nephritis, susceptibility to, 1","secondary_identifiers":["MEDGEN:335794","OMIM:607965","UMLS:C1842757"],"synonyms":[{"name":"SLEN1","type":"exact"},{"name":"systemic lupus erythematosus with nephritis, susceptibility to, 1","type":"exact"}],"termid":"MONDO:0011942","xrefs":{"Monarch":{"xref_id":"0011942"}}}


id: MONDO:0032625
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial complex I deficiency, nuclear type","termid":"MONDO:0100223"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0004069","MONDO:0005066"],"is_obsolete":false,"name":"mitochondrial complex 1 deficiency, nuclear type 21","secondary_identifiers":["DOID:0112088","OMIM:618242","GARD:16327","MEDGEN:1648383","UMLS:C4748792"],"synonyms":[{"name":"MC1DN21","type":"related"},{"name":"MITOCHONDRIAL COMPLEX I DEFICIENCY, NUCLEAR TYPE 21","type":"related"}],"termid":"MONDO:0032625","xrefs":{"Monarch":{"xref_id":"0032625"}}}


id: GO:1903684
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of border follicle cell migration.","definition_xrefs":["GOC:TermGenie","GOC:als","PMID:18394891","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of epithelial cell migration","termid":"GO:0010632"},{"relation_name":"regulates","term_name":"border follicle cell migration","termid":"GO:0007298"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of border follicle cell migration","synonyms":[{"name":"regulation of border cell migration","type":"broad"}],"termid":"GO:1903684"}


id: GO:0009822
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of alkaloids, nitrogen containing natural products not otherwise classified as peptides, nonprotein amino acids, amines, cyanogenic glycosides, glucosinolates, cofactors, phytohormones or primary metabolites (such as purine or pyrimidine bases).","definition_xrefs":["ISBN:0122146743","GOC:lr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catabolic process","termid":"GO:0009056"},{"relation_name":"is_a","term_name":"alkaloid metabolic process","termid":"GO:0009820"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"alkaloid catabolic process","synonyms":[{"name":"alkaloid breakdown","type":"exact"},{"name":"alkaloid catabolism","type":"exact"},{"name":"alkaloid degradation","type":"exact"}],"termid":"GO:0009822"}


id: GO:0004192
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the hydrolysis of peptide bonds. Specificity similar to, but narrower than, that of pepsin A. Does not cleave the Gln4-His5 bond in the B chain of insulin.","definition_xrefs":["EC:3.4.23.5"],"gene_count":0,"genotype_count":0,"name":"obsolete cathepsin D activity (obsolete GO:0004192)","synonyms":[{"name":"cathepsin D activity","type":"exact"}],"termid":"GO:0004192"}


id: MONDO:0005836
data:
  {"annotated_genes":["SJAG_04885","SJAG_00997"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87679,87680],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013872"}]},"cv_name":"mondo","definition":"A primary or metastatic malignant neoplasm involving the male reproductive system. Representative examples include prostate carcinoma, penile carcinoma, testicular seminoma, and testicular embryonal carcinoma.","definition_xrefs":["NCIT:C8561"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reproductive system cancer","termid":"MONDO:0002149"},{"relation_name":"is_a","term_name":"male reproductive system neoplasm","termid":"MONDO:0024582"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00997":null,"SJAG_04885":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"male reproductive organ cancer","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:102279","DOID:3856","ICD9:187.9","SCTID:363515000","UMLS:C0153606","MESH:D005834","EFO:0007355","ICD9:187.8"],"synonyms":[{"name":"cancer of male reproductive organ","type":"exact"},{"name":"male genital cancer","type":"exact"},{"name":"male genital neoplasm","type":"broad"},{"name":"male reproductive organ cancer","type":"exact"},{"name":"male reproductive system neoplasm","type":"broad"},{"name":"malignant Male reproductive system neoplasm","type":"exact"},{"name":"malignant Male reproductive system tumor","type":"exact"},{"name":"malignant Male reproductive system tumour","type":"exact"},{"name":"malignant male reproductive organ neoplasm","type":"exact"},{"name":"malignant neoplasm of Male reproductive system","type":"exact"},{"name":"malignant neoplasm of male genital organ","type":"exact"},{"name":"malignant neoplasm of male genital organ or tract","type":"exact"},{"name":"malignant neoplasm of male genital organ, site unspecified","type":"exact"},{"name":"malignant neoplasm of male genital organs","type":"exact"},{"name":"malignant neoplasm of male reproductive organ","type":"exact"},{"name":"malignant neoplasm of the Male reproductive system","type":"exact"},{"name":"malignant tumor of Male reproductive system","type":"exact"},{"name":"malignant tumor of male genital organ","type":"exact"},{"name":"malignant tumor of male reproductive system","type":"exact"},{"name":"malignant tumor of the Male reproductive system","type":"exact"},{"name":"malignant tumour of Male reproductive system","type":"exact"},{"name":"malignant tumour of male genital organ","type":"exact"},{"name":"malignant tumour of male reproductive system","type":"exact"},{"name":"malignant tumour of the Male reproductive system","type":"exact"},{"name":"neoplasm of male genital organ","type":"broad"},{"name":"tumor of male reproductive system","type":"broad"},{"name":"tumour of male reproductive system","type":"broad"}],"termid":"MONDO:0005836","terms_by_termid":{"MONDO:0013872":null},"xrefs":{"Monarch":{"xref_id":"0005836"}}}


id: PBO:0052031
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Jrk helix-turn-helix protein","termid":"PBO:0052031"}


id: GO:1901597
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a carbendazim stimulus.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to carbendazim","termid":"GO:1901597"}


id: PBO:0111788
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bromodomain","termid":"PBO:0111788"}


id: PBO:0030291
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cell_population_growth_on_glucose_carbon_source","termid":"PBO:0030291"}


id: PR:O94691
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- jmj3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94691"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lid2 complex component jmj3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC83.07","synonyms":[{"name":"Lid2C component jmj3 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-jmj3","type":"exact"}],"termid":"PR:O94691"}


id: PBO:0039252
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aldehyde dehydrogenase 3 family member A2","termid":"PBO:0039252"}


id: PBO:0035944
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3-K56_acetylation_in_transcribed_regions_during_vegetative_growth","termid":"PBO:0035944"}


id: GO:2000939
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of plant-type cell wall cellulose catabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of beta-glucan metabolic process","termid":"GO:0032950"},{"relation_name":"is_a","term_name":"regulation of cell wall polysaccharide catabolic process","termid":"GO:2000966"},{"relation_name":"regulates","term_name":"plant-type cell wall cellulose catabolic process","termid":"GO:0044348"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"regulation of plant-type cell wall cellulose catabolic process","synonyms":[{"name":"regulation of plant-type cell wall polysaccharide breakdown","type":"exact"}],"termid":"GO:2000939"}


id: MONDO:0001433
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A non-neoplastic or neoplastic disorder that affects the vagina. Representative examples include vaginal infection, vaginal polyp, and vaginal squamous cell carcinoma.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"female reproductive system disorder","termid":"MONDO:0002263"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vaginal disorder","secondary_identifiers":["NCIT:C26910","SCTID:25658005","UMLS:C0042251","DOID:121","MESH:D014623","MEDGEN:12042"],"synonyms":[{"name":"disease of vagina","type":"exact"},{"name":"disease or disorder of vagina","type":"exact"},{"name":"disorder of vagina","type":"exact"},{"name":"vagina disease","type":"exact"},{"name":"vagina disease or disorder","type":"exact"},{"name":"vaginal disease","type":"exact"},{"name":"vaginal disorder","type":"exact"}],"termid":"MONDO:0001433","xrefs":{"Monarch":{"xref_id":"0001433"}}}


id: GO:0019678
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving propionate that occur in the methylmalonyl pathway.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"propionate metabolic process","termid":"GO:0019541"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006629","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"propionate metabolic process, methylmalonyl pathway","secondary_identifiers":["MetaCyc:PROPIONMET-PWY"],"synonyms":[{"name":"propionate metabolism, methylmalonyl pathway","type":"exact"}],"termid":"GO:0019678"}


id: FYPO:0003661
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of double-strand break repair via nonhomologous end joining (NHEJ) is abnormal. NHEJ is the repair of double-strand breaks in DNA in which the two broken ends are rejoined with little or no sequence complementarity.","definition_xrefs":["PomBase:mah","GO:0006303"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal double-strand break repair during vegetative growth","termid":"FYPO:0000777"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0000298","FYPO:0001985","FYPO:0000293"],"is_obsolete":false,"name":"abnormal double-strand break repair via nonhomologous end joining","synonyms":[{"name":"abnormal NHEJ","type":"exact"},{"name":"abnormal double-strand break repair via nonhomologous end joining during mitotic cell cycle","type":"related"},{"name":"abnormal double-strand break repair via nonhomologous end joining during vegetative growth","type":"exact"},{"name":"abnormal nonhomologous end joining","type":"exact"}],"termid":"FYPO:0003661"}


id: PBO:0085125
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nucleolar protein; required for 35S pre-RNA processing and 40S ribosomal subunit biogenesis","termid":"PBO:0085125"}


id: MONDO:0021514
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign neoplasm that involves the pericardium.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiovascular organ benign neoplasm","termid":"MONDO:0000629"},{"relation_name":"is_a","term_name":"thoracic benign neoplasm","termid":"MONDO:0000634"},{"relation_name":"is_a","term_name":"neoplasm of pericardium","termid":"MONDO:0021381"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"benign neoplasm of pericardium","secondary_identifiers":["SCTID:92289001","NCIT:C8536","icd11.foundation:1296244385","MEDGEN:151928","UMLS:C0685118"],"synonyms":[{"name":"benign neoplasm of the pericardium","type":"exact"},{"name":"benign pericardial neoplasm","type":"exact"},{"name":"benign pericardial tumor","type":"exact"},{"name":"benign pericardial tumour","type":"exact"},{"name":"benign tumor of pericardium","type":"exact"},{"name":"benign tumor of the pericardium","type":"exact"},{"name":"benign tumour of pericardium","type":"exact"},{"name":"benign tumour of the pericardium","type":"exact"},{"name":"pericardium benign neoplasm","type":"exact"}],"termid":"MONDO:0021514","xrefs":{"Monarch":{"xref_id":"0021514"}}}


id: MONDO:0009484
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any primary ciliary dyskinesia in which the cause of the disease is a mutation in the DNAI1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary ciliary dyskinesia","termid":"MONDO:0016575"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"primary ciliary dyskinesia 1","secondary_identifiers":["OMIM:244400","Orphanet:98861","MEDGEN:1646059","NCIT:C128117","UMLS:C4551906","DOID:0110594"],"synonyms":[{"name":"CILD1","type":"exact"},{"name":"DNAI1 primary ciliary dyskinesia","type":"exact"},{"name":"Kartagener syndrome","type":"related"},{"name":"PCD","type":"related"},{"name":"Polynesian bronchiectasis","type":"related"},{"name":"Siewert syndrome","type":"related"},{"name":"ciliary dyskinesia, primary, 1","type":"related"},{"name":"ciliary dyskinesia, primary, 1, with or without situs inversus","type":"related"},{"name":"ciliary dyskinesia, primary, type 1","type":"exact"},{"name":"dextrocardia, bronchiectasis, and sinusitis","type":"related"},{"name":"immotile cilia syndrome","type":"related"},{"name":"primary ciliary dyskinesia 1","type":"exact"},{"name":"primary ciliary dyskinesia 1 with or without situs inversus","type":"exact"},{"name":"primary ciliary dyskinesia caused by mutation in DNAI1","type":"exact"},{"name":"primary ciliary dyskinesia type 1","type":"exact"}],"termid":"MONDO:0009484","xrefs":{"Monarch":{"xref_id":"0009484"}}}


id: MONDO:0030983
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Waardenburg syndrome","termid":"MONDO:0018094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"Waardenburg syndrome, IIa 2F","secondary_identifiers":["OMIM:619947","MEDGEN:1809587","UMLS:C5677013"],"synonyms":[{"name":"WS2F","type":"exact"},{"name":"Waardenburg syndrome, IIa 2F","type":"exact"}],"termid":"MONDO:0030983","xrefs":{"Monarch":{"xref_id":"0030983"}}}


id: PBO:0014593
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"snRNA Maintenance","termid":"PBO:0014593"}


id: PBO:0056544
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MCF2L2 pseudogene 1","termid":"PBO:0056544"}


id: PBO:0074978
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 114-20","termid":"PBO:0074978"}


id: PBO:0090563
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription factor, MADS-box Pvg4","termid":"PBO:0090563"}


id: MOD:00018
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a source amino acid residue to an L-histidine.","definition_xrefs":["PubMed:512","PubMed:5460889","PubMed:6876174","PubMed:14342316","ChEBI:29979","PubMed:6692818","RESID:AA0009","PubMed:6129252","DeltaMass:0","PubMed:2722967"],"direct_ancestors":[{"relation_name":"is_a","term_name":"natural, standard, encoded residue","termid":"MOD:01441"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-histidine residue","synonyms":[{"name":"(2S)-2-amino-3-(1H-imidazol-4-yl)propanoic acid","type":"exact"},{"name":"(2S)-2-amino-3-(1H-imidazol-5-yl)propanoic acid [tautomer]","type":"exact"},{"name":"2-azanyl-3-(1H-imidazol-4-yl)propanoic acid","type":"exact"},{"name":"2-azanyl-3-(1H-imidazol-5-yl)propanoic acid [tautomer]","type":"exact"},{"name":"4-(2-amino-2-carboxyethyl)imidazole","type":"exact"},{"name":"His","type":"exact"},{"name":"L-histidine","type":"exact"},{"name":"alpha-amino-beta-(4-imidazole)propionic acid","type":"exact"},{"name":"glyoxaline-5-alanine","type":"exact"}],"termid":"MOD:00018"}


id: PBO:0088917
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein, involved in ribosome biogenesis","termid":"PBO:0088917"}


id: PBO:0051320
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 1/OR15-118 (pseudogene)","termid":"PBO:0051320"}


id: FYPO:0006468
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of mature ribosomal RNA (rRNA) measured in a cell differs from normal when the cell is in the vegetative growth phase of the life cycle. Total rRNA or a specific rRNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered rRNA or precursor level","termid":"FYPO:0005996"},{"relation_name":"is_a","term_name":"altered mature ncRNA level during vegetative growth","termid":"FYPO:0006465"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0006551","FYPO:0001985"],"is_obsolete":false,"name":"altered mature rRNA level during vegetative growth","synonyms":[{"name":"abnormal rRNA level during vegetative growth","type":"broad"},{"name":"altered cellular mature rRNA level during vegetative growth","type":"exact"},{"name":"altered mature rRNA level during mitotic cell cycle","type":"related"},{"name":"altered mature rRNA transcript level during vegetative growth","type":"exact"},{"name":"altered mature ribosomal RNA level during vegetative growth","type":"exact"}],"termid":"FYPO:0006468"}


id: PBO:0038909
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adhesion G protein-coupled receptor E4, pseudogene","termid":"PBO:0038909"}


id: PBO:0081680
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 601, pseudogene","termid":"PBO:0081680"}


id: PBO:0113467
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the tRNA splicing endonuclease; tRNA splicing endonuclease (Sen complex) is composed of Sen2p, Sen15p, Sen34p, and Sen54p; Sen complex also cleaves the CBP1 mRNA at the mitochondrial surface; Sen2p contains the active site for tRNA 5' splice site cleavage and has similarity to Sen34p and to Archaeal tRNA splicing endonuclease; localizes to the peroxisome in a Pex5p-dependent manner in oleate","termid":"PBO:0113467"}


id: MONDO:0012268
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A syndrome resulting from the acquired deficiency of cellular immunity caused by the human immunodeficiency virus (HIV). It is characterized by the reduction of the Helper T-lymphocytes in the peripheral blood and the lymph nodes. Symptoms include generalized lymphadenopathy, fever, weight loss, and chronic diarrhea. Patients with AIDS are especially susceptible to opportunistic infections (usually pneumocystis carinii pneumonia, cytomegalovirus (CMV) infections, tuberculosis, candida infections, and cryptococcosis), and the development of malignant neoplasms (usually non-Hodgkin lymphoma and Kaposi sarcoma). The human immunodeficiency virus is transmitted through sexual contact, sharing of contaminated needles, or transfusion of contaminated blood.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T-cell immunodeficiency","termid":"MONDO:0003780"},{"relation_name":"is_a","term_name":"HIV infectious disease","termid":"MONDO:0005109"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"AIDS","secondary_identifiers":["UMLS:C0001175","NANDO:2100212","SCTID:62479008","EFO:0000765","DOID:635","MESH:D000163","NCIT:C2851","MEDGEN:99","NANDO:2200809"],"synonyms":[{"name":"AIDS","type":"exact"},{"name":"AIDS, acquired immunodeficiency syndrome","type":"exact"},{"name":"acquired immune deficiency","type":"exact"},{"name":"acquired immune deficiency syndrome","type":"related"},{"name":"acquired immunodeficiency disease","type":"exact"},{"name":"acquired immunodeficiency syndrome","type":"related"},{"name":"acquired immunodeficiency syndrome, AIDS","type":"exact"}],"termid":"MONDO:0012268","xrefs":{"Monarch":{"xref_id":"0012268"}}}


id: PBO:0088337
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane heat shock protein Hsp9","termid":"PBO:0088337"}


id: PBO:0028848
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_RNA_stability_during_cellular_response_to_UV","termid":"PBO:0028848"}


id: SO:0000950
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attC site is a sequence required for the integration of a DNA of an integron.","definition_xrefs":["SO:as"],"direct_ancestors":[{"relation_name":"is_a","term_name":"integration_excision_site","termid":"SO:0000946"},{"relation_name":"part_of","term_name":"integron","termid":"SO:0000365"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"attC_site","synonyms":[{"name":"attC site","type":"exact"}],"termid":"SO:0000950"}


id: PR:000059628
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A GTP-binding protein rhb1 (Schizosaccharomyces pombe) that is non-covalently bound to GDP.","definition_xrefs":["PomBase:VW","PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rhb1/GTP-","pombase_gene_id":"SPBC428.16c","synonyms":[{"name":"PomBase_original_PRO_term_name: GTP-binding protein rhb1, GDP-bound form (Schizosaccharomyces pombe)","type":"exact"},{"name":"Rhb1/GTP-","type":"exact"},{"name":"Spom-rhb1/GDP+","type":"exact"}],"termid":"PR:000059628"}


id: PBO:0089731
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pleckstrin homology domain protein Opy1","termid":"PBO:0089731"}


id: PBO:0091755
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human ELL","termid":"PBO:0091755"}


id: GO:0005727
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Circular DNA structures that are not part of a chromosome.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular anatomical structure","termid":"GO:0005622"},{"relation_name":"part_of","term_name":"extrachromosomal DNA","termid":"GO:0046821"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"extrachromosomal circular DNA","termid":"GO:0005727"}


id: FYPO:0004243
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a protein kinase activity is decreased during a cellular response to DNA damage.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein kinase activity","termid":"FYPO:0001382"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000652","FYPO:0000661","FYPO:0001985","FYPO:0000707"],"is_obsolete":false,"name":"decreased protein kinase activity during cellular response to DNA damage","synonyms":[{"name":"decreased protein kinase activity in response to DNA damage","type":"related"},{"name":"reduced protein kinase activity during cellular response to DNA damage","type":"exact"}],"termid":"FYPO:0004243"}


id: GO:0008094
data:
  {"annotated_genes":["SJAG_06597","SJAG_01762","SJAG_02199","SJAG_01620","SJAG_03206","SJAG_00475","SJAG_05105","SJAG_04355","SJAG_01938","SJAG_00757","SJAG_02545","SJAG_03036","SJAG_02563","SJAG_04147","SJAG_01677","SJAG_04372","SJAG_02200","SJAG_04210","SJAG_05313","SJAG_01807","SJAG_02348","SJAG_00871","SJAG_00857","SJAG_04064","SJAG_04150","SJAG_02242","SJAG_02575","SJAG_04114","SJAG_00806","SJAG_00500","SJAG_02295","SJAG_03982","SJAG_03780","SJAG_03495","SJAG_02748","SJAG_02872","SJAG_02571","SJAG_02521","SJAG_02182","SJAG_02187","SJAG_00272","SJAG_03567","SJAG_03832","SJAG_05372","SJAG_04755","SJAG_02690","SJAG_00995","SJAG_01419","SJAG_02698","SJAG_03898","SJAG_02610","SJAG_05295","SJAG_01878","SJAG_02226","SJAG_00925","SJAG_00863","SJAG_02373","SJAG_00884","SJAG_02294","SJAG_02267","SJAG_01644","SJAG_05173","SJAG_01410","SJAG_00980","SJAG_03886","SJAG_00111","SJAG_03613","SJAG_00729","SJAG_02708","SJAG_02822","SJAG_01354","SJAG_06642","SJAG_01221","SJAG_05353","SJAG_02906","SJAG_04038","SJAG_01653","SJAG_04692","SJAG_02460","SJAG_04183","SJAG_01010"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[71014,73156,78141,89261,117974],"is_not":false,"summary":null,"term":"GO:0008094"},{"annotations":[78485,74992,70719,73834,111333,113331,71175,114669,113333,113332,78042,79811,113335,78337,75128],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043138"},{"annotations":[115665,106803,107615],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033679"},{"annotations":[92541,77215,58953],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043139"},{"annotations":[112909,100251],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033678"},{"annotations":[102055,117083,112631,79773,80769,59865,72181,117084],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140658"},{"annotations":[59158,56961,61584,64396,63486,65004,59916,58085,67893,60409],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140664"},{"annotations":[88343],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140849"},{"annotations":[94976,103929,96813],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140665"},{"annotations":[113466],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140674"},{"annotations":[112912,107325],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061995"},{"annotations":[113217,113128,78050,76790,96677,71517,72979,69233,77525,92077],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003689"},{"annotations":[94334,95641,89944,112665,113218],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061860"},{"annotations":[73178,77063,72416,89540,76669],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003678"},{"annotations":[59280,68741],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003918"},{"annotations":[113773,71489,78212,103546],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015616"},{"annotations":[79216,118575,90167],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036121"},{"annotations":[79219],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061749"},{"annotations":[71178,78488,78341,79815],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009378"},{"annotations":[72526,80231,113684,70778,73339,73796],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140750"},{"annotations":[115669,107618,109465,70343],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990518"},{"annotations":[64098,73651,73837,78946,112918,74995],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0017116"}]},"cv_name":"molecular_function","definition":"Catalytic activity that acts to modify DNA, driven by ATP hydrolysis.","definition_xrefs":["GOC:pdt"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic activity, acting on DNA","termid":"GO:0140097"},{"relation_name":"is_a","term_name":"ATP-dependent 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activity, acting on DNA","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000003":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0004011"],"synonyms":[{"name":"ATPase activity, acting on DNA","type":"exact"},{"name":"ATPase, acting on DNA","type":"exact"},{"name":"DNA dependent ATPase activity","type":"exact"},{"name":"DNA-dependent ATPase activity","type":"exact"},{"name":"DNA-dependent adenosinetriphosphatase activity","type":"exact"},{"name":"adenosinetriphosphatase (DNA-dependent)","type":"exact"}],"termid":"GO:0008094","terms_by_termid":{"GO:0003678":null,"GO:0003689":null,"GO:0003918":null,"GO:0008094":null,"GO:0009378":null,"GO:0015616":null,"GO:0017116":null,"GO:0033678":null,"GO:0033679":null,"GO:0036121":null,"GO:0043138":null,"GO:0043139":null,"GO:0061749":null,"GO:0061860":null,"GO:0061995":null,"GO:0140658":null,"GO:0140664":null,"GO:0140665":null,"GO:0140674":null,"GO:0140750":null,"GO:0140849":null,"GO:1990518":null}}


id: FYPO:0001219
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of protein measured in a cell during a cellular response to nitrogen starvation is higher than normal. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein level","termid":"FYPO:0000836"},{"relation_name":"is_a","term_name":"altered level of substance in cell during nitrogen starvation","termid":"FYPO:0004139"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0006551","FYPO:0005447"],"is_obsolete":false,"name":"increased protein level during cellular response to nitrogen starvation","synonyms":[{"name":"increased protein accumulation during cellular response to nitrogen starvation","type":"related"},{"name":"increased protein level during cellular response to nitrogen depletion","type":"exact"},{"name":"increased protein level during cellular response to nitrogen deprivation","type":"exact"},{"name":"increased protein level during nitrogen starvation","type":"exact"}],"termid":"FYPO:0001219"}


id: MONDO:0000944
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"arterial occlusion","termid":"MONDO:0020673"},{"relation_name":"is_a","term_name":"cerebral artery stenosis","termid":"MONDO:1040016"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cerebral artery occlusion","secondary_identifiers":["DOID:10127","MEDGEN:507994","ICD9:434.90","ICD9:434.91","SCTID:20059004","ICD9:434","UMLS:C0028790","ICD9:434.9"],"termid":"MONDO:0000944","xrefs":{"Monarch":{"xref_id":"0000944"}}}


id: GO:0061817
data:
  {"annotated_genes":["SJAG_01437","SJAG_03170","SJAG_01168","SJAG_04413","SJAG_00053","SJAG_02626","SJAG_01564","SJAG_04417","SJAG_03247"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[60593,61500,62365,72278,90771,91846,97814,112046,118545],"is_not":false,"summary":null,"term":"GO:0061817"}]},"cv_name":"biological_process","definition":"The attachment of an endoplasmic reticulum membrane to the plasma membrane via molecular tethers.","definition_xrefs":["GOC:dph","PMID:23237950","PMID:26877082","PMID:27875684","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endoplasmic reticulum localization","termid":"GO:0051643"},{"relation_name":"is_a","term_name":"organelle localization by membrane tethering","termid":"GO:0140056"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00053":null,"SJAG_01168":null,"SJAG_01437":null,"SJAG_01564":null,"SJAG_02626":null,"SJAG_03170":null,"SJAG_03247":null,"SJAG_04413":null,"SJAG_04417":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140056"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0140056"],"is_obsolete":false,"name":"endoplasmic reticulum-plasma membrane tethering","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"ER-plasma membrane tethering","type":"exact"}],"termid":"GO:0061817","terms_by_termid":{"GO:0061817":null}}


id: GO:1990309
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type-II dockerin domain of a protein. Type-II dockerin domain is the binding partner of type-II cohesin domain.","definition_xrefs":["PMID:24080387","GOC:mengo_curators","PMID:23195689"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein domain specific binding","termid":"GO:0019904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"type-II dockerin domain binding","termid":"GO:1990309"}


id: PBO:0074488
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMYD family member 5","termid":"PBO:0074488"}


id: GO:0075282
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of uredinium development, a process that leads to the formation of a reddish, pustule-like structure formed by a rust fungus and consisting of uredospores.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of spore-bearing organ development","termid":"GO:0075262"},{"relation_name":"is_a","term_name":"regulation of uredinium development","termid":"GO:0075280"},{"relation_name":"negatively_regulates","term_name":"uredinium development","termid":"GO:0075279"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of uredinium development","termid":"GO:0075282"}


id: GO:0160071
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulation of double fertilization forming a zygote and endosperm process that ensures that only a single sperm cell fertilizes one egg cell and another single sperm cell fertilizes one central cell.","definition_xrefs":["PMID:27951463"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of double fertilization forming a zygote and endosperm","termid":"GO:0080155"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"prevention of polyspermy during double fertilization","termid":"GO:0160071"}


id: GO:0035584
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals in which a cell uses calcium ions released from an intracellular store to convert a signal into a response.","definition_xrefs":["PMID:20192754","GOC:bf","GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete calcium-mediated signaling using intracellular calcium source (obsolete GO:0035584)","synonyms":[{"name":"calcium signaling using intracellular calcium source","type":"exact"},{"name":"calcium signalling using intracellular calcium source","type":"exact"},{"name":"calcium-mediated signalling using intracellular calcium source","type":"exact"}],"termid":"GO:0035584"}


id: MONDO:0004483
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A thyroid gland adenoma composed of large cells with abundant granular eosinophilic cytoplasm and large nuclei with prominent nucleoli.","definition_xrefs":["NCIT:C6042"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oncocytic adenoma","termid":"MONDO:0003424"},{"relation_name":"is_a","term_name":"follicular thyroid adenoma","termid":"MONDO:0005032"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thyroid gland oncocytic adenoma","secondary_identifiers":["ONCOTREE:OAT","DOID:8162","UMLS:C1336750","MEDGEN:237009"],"synonyms":[{"name":"Hurthle cell adenoma","type":"related"},{"name":"Hurthle cell adenoma of the thyroid","type":"related"},{"name":"Hurthle cell adenoma of the thyroid gland","type":"related"},{"name":"Hurthle cell adenoma of thyroid","type":"related"},{"name":"Hurthle cell adenoma of thyroid gland","type":"related"},{"name":"OAT","type":"broad"},{"name":"benign oncocytoma of the thyroid","type":"exact"},{"name":"benign oncocytoma of the thyroid gland","type":"related"},{"name":"benign oncocytoma of thyroid","type":"related"},{"name":"benign oncocytoma of thyroid gland","type":"related"},{"name":"benign thyroid gland oncocytoma","type":"related"},{"name":"benign thyroid oncocytoma","type":"related"},{"name":"follicular adenoma of the thyroid gland of the oxyphilic cell type","type":"related"},{"name":"follicular adenoma of the thyroid of the oxyphilic cell type","type":"related"},{"name":"follicular adenoma of thyroid gland of oxyphilic cell type","type":"related"},{"name":"follicular adenoma of thyroid of oxyphilic cell type","type":"related"},{"name":"oncocytic adenoma of the thyroid","type":"related"},{"name":"oncocytic adenoma of the thyroid gland","type":"related"},{"name":"oncocytic adenoma of thyroid","type":"related"},{"name":"oncocytic adenoma of thyroid gland","type":"related"},{"name":"thyroid Hurthle cell adenoma","type":"related"},{"name":"thyroid follicular adenoma of oxyphilic cell type","type":"related"},{"name":"thyroid follicular adenoma of the oxyphilic cell type","type":"related"},{"name":"thyroid gland Hurthle cell adenoma","type":"related"},{"name":"thyroid gland follicular adenoma of oxyphilic cell type","type":"related"},{"name":"thyroid gland follicular adenoma of the oxyphilic cell type","type":"related"},{"name":"thyroid gland oncocytic adenoma","type":"exact"},{"name":"thyroid oncocytic adenoma","type":"related"}],"termid":"MONDO:0004483","xrefs":{"Monarch":{"xref_id":"0004483"}}}


id: GO:0034696
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a prostagladin F stimulus.","definition_xrefs":["GOC:BHF","GOC:vk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to prostaglandin","termid":"GO:0034694"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to prostaglandin F","synonyms":[{"name":"response to prostaglandin F stimulus","type":"exact"}],"termid":"GO:0034696"}


