# terms

id: PBO:0056822
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major facilitator superfamily domain containing 13B (pseudogene)","termid":"PBO:0056822"}


id: PBO:0075668
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine palmitoyltransferase long chain base subunit 1 pseudogene 3","termid":"PBO:0075668"}


id: PBO:0038717
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin gamma 1 pseudogene 12","termid":"PBO:0038717"}


id: MONDO:0007092
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any amelogenesis imperfecta in which the cause of the disease is a mutation in the ENAM gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"amelogenesis imperfecta type 1","termid":"MONDO:0015047"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"amelogenesis imperfecta type 1B","secondary_identifiers":["DOID:0110052","OMIM:104500","GARD:15037","ICD9:520.5","MEDGEN:97993","MESH:C562879","UMLS:C0399368","SCTID:234961008"],"synonyms":[{"name":"AI1B","type":"exact"},{"name":"AIH2","type":"related"},{"name":"ENAM amelogenesis imperfecta","type":"exact"},{"name":"amelogenesis imperfecta caused by mutation in ENAM","type":"exact"},{"name":"amelogenesis imperfecta caused by mutation in enam","type":"exact"},{"name":"amelogenesis imperfecta type IB","type":"exact"},{"name":"amelogenesis imperfecta, hypoplastic local, autosomal dominant","type":"related"},{"name":"amelogenesis imperfecta, type 1B","type":"related"},{"name":"amelogenesis imperfecta, type IB","type":"related"},{"name":"autosomal dominant hypoplastic local amelogenesis imperfecta","type":"exact"},{"name":"enam amelogenesis imperfecta","type":"exact"},{"name":"enamel hypoplasia, hereditary localised","type":"related"},{"name":"enamel hypoplasia, hereditary localized","type":"related"},{"name":"hereditary localised enamel hypoplasia","type":"exact"},{"name":"hereditary localized enamel hypoplasia","type":"exact"}],"termid":"MONDO:0007092","xrefs":{"Monarch":{"xref_id":"0007092"}}}


id: GO:0097061
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a dendritic spine. A dendritic spine is a specialized protrusion from a neuronal dendrite and is involved in synaptic transmission.","definition_xrefs":["GOC:BHF","PMID:20410104"],"direct_ancestors":[{"relation_name":"is_a","term_name":"postsynapse organization","termid":"GO:0099173"},{"relation_name":"is_a","term_name":"neuron projection organization","termid":"GO:0106027"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dendritic spine organization","synonyms":[{"name":"dendritic spine organisation","type":"exact"}],"termid":"GO:0097061"}


id: PBO:0041023
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BPI fold containing family B member 6","termid":"PBO:0041023"}


id: MONDO:0004491
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An aggressive malignant tumor arising from trophoblastic cells in the uterus during pregnancy. Approximately half of the cases develop from a complete hydatidiform mole. There is often marked elevation of human chorionic gonadotropin (hCG) in the blood. Choriocarcinomas disseminate rapidly through the hematogenous route; the lungs are most frequently affected.","definition_xrefs":["NCIT:C27246"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malignant germ cell tumor of corpus uteri","termid":"MONDO:0016273"},{"relation_name":"is_a","term_name":"gestational choriocarcinoma","termid":"MONDO:0020550"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"uterine corpus choriocarcinoma","secondary_identifiers":["UMLS:C1336904","DOID:8188","DOID:8187","MEDGEN:234466","ONCOTREE:UCCA"],"synonyms":[{"name":"body of uterus choriocarcinoma (disease)","type":"exact"},{"name":"body of uterus gestational choriocarcinoma","type":"exact"},{"name":"choriocarcinoma","type":"related"},{"name":"gestational choriocarcinoma of body of uterus","type":"exact"},{"name":"gestational uterine corpus choriocarcinoma","type":"exact"},{"name":"uterine corpus gestational choriocarcinoma","type":"exact"}],"termid":"MONDO:0004491","xrefs":{"Monarch":{"xref_id":"0004491"}}}


id: PBO:0050841
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IBA57 divergent transcript","termid":"PBO:0050841"}


id: MONDO:0004747
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A congenital abnormality consisting of one or more clefts (splits) in the upper lip, which may be accompanied by a cleft palate; it is the result of the failure of the embryonic parts of the lip to fuse.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"orofacial cleft","termid":"MONDO:0000358"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cleft lip","secondary_identifiers":["ICD9:749.10","UMLS:C4321245","NCIT:C87175","SCTID:80281008","DOID:9296","MEDGEN:1370297","ICD9:749.1","HP:0410030","ICD9:749.11","MESH:D002971"],"synonyms":[{"name":"cheiloschisis","type":"exact"},{"name":"cleft lip","type":"exact"},{"name":"cleft lip (disease)","type":"exact"},{"name":"cleft lip, unilateral, complete","type":"exact"},{"name":"complete unilateral cleft lip","type":"exact"},{"name":"hare lip","type":"exact"},{"name":"labium leporinum","type":"exact"}],"termid":"MONDO:0004747","xrefs":{"Monarch":{"xref_id":"0004747"}}}


id: PBO:0061757
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-acyl-ADP-ribose deacylase 1","termid":"PBO:0061757"}


id: MONDO:0004446
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A meningioma that affects the olfactory sulcus.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anterior cranial fossa meningioma","termid":"MONDO:0002997"},{"relation_name":"is_a","term_name":"brain neoplasm","termid":"MONDO:0021211"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory groove meningioma","secondary_identifiers":["icd11.foundation:1489164089","UMLS:C1335107","MEDGEN:235402","DOID:8057","NCIT:C6771"],"synonyms":[{"name":"meningioma (disease) of olfactory sulcus","type":"exact"},{"name":"meningioma of olfactory groove","type":"exact"},{"name":"meningioma of the olfactory groove","type":"exact"},{"name":"olfactory sulcus meningioma (disease)","type":"exact"}],"termid":"MONDO:0004446","xrefs":{"Monarch":{"xref_id":"0004446"}}}


id: PATO:0001397
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A cellular quality that arises by virtue of whether the bearer's disposition to differentiate into one or more mature cell types.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular quality","termid":"PATO:0001396"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cellular potency","termid":"PATO:0001397"}


id: GO:0033977
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reactions: (S)-2-haloacid + H2O = (S)-2-hydroxyacid + halide, and (R)-2-haloacid + H2O = (R)-2-hydroxyacid + halide.","definition_xrefs":["RHEA:12072"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on acid halide bonds, in C-halide compounds","termid":"GO:0019120"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"2-haloacid dehalogenase (configuration-retaining) activity","secondary_identifiers":["MetaCyc:3.8.1.11-RXN","EC:3.8.1.11"],"synonyms":[{"name":"2-haloalkanoic acid dehalogenase activity","type":"broad"},{"name":"2-haloalkanoid acid halidohydrolase activity","type":"broad"},{"name":"DL-2-haloacid dehalogenase activity","type":"broad"},{"name":"DL-DEXr","type":"related"}],"termid":"GO:0033977"}


id: PBO:0031199
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cell_cycle_arrest_in_mitotic_G2_phase_during_glucose_starvation","termid":"PBO:0031199"}


id: PBO:0071748
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L41 pseudogene 4","termid":"PBO:0071748"}


id: PBO:0067313
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 399, pseudogene","termid":"PBO:0067313"}


id: PBO:0072051
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S10 pseudogene 21","termid":"PBO:0072051"}


id: MONDO:0014936
data:
  {"annotated_genes":["SJAG_01232","SJAG_02256"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87536,87537],"is_not":false,"summary":null,"term":"MONDO:0014936"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01232":null,"SJAG_02256":null},"genotype_count":0,"is_obsolete":false,"name":"ZTTK syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0060953","Orphanet:500150","UMLS:C4310696","OMIM:617140","MEDGEN:934663","GARD:13489"],"synonyms":[{"name":"TOKIMS","type":"exact"},{"name":"Tokita-Kim syndrome","type":"exact"},{"name":"ZTTK multiple congenital anomalies-intellectual disability syndrome","type":"related"},{"name":"ZTTK multiple congenital anomalies-mental retardation syndrome","type":"related"},{"name":"ZTTK syndrome","type":"exact"},{"name":"ZTTKS","type":"related"},{"name":"Zhu-Tokita-Takenouchi-Kim syndrome","type":"related"},{"name":"brain malformations-musculoskeletal abnormalities-facial dysmorphism-intellectual disability syndrome","type":"related"}],"termid":"MONDO:0014936","terms_by_termid":{"MONDO:0014936":null},"xrefs":{"Monarch":{"xref_id":"0014936"}}}


id: PBO:0000457
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tryptophan-tRNA ligase Wrs1 (predicted)","termid":"PBO:0000457"}


id: PBO:0038617
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ACE2 divergent transcript","termid":"PBO:0038617"}


id: MOD:01240
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that crosslinks the N6-amino of a peptidyl lysine with the carboxyl of leucyl-arginyl-glycyl-glycine, the C-terminal tetrapeptide of ubiquitin.","definition_xrefs":["Unimod:535","PubMed:10504701"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"ubiquitinylated lysine","termid":"MOD:01148"},{"relation_name":"is_a","term_name":"N6-acylated L-lysine","termid":"MOD:01875"},{"relation_name":"is_a","term_name":"crosslinked glycine residue","termid":"MOD:02047"},{"relation_name":"is_a","term_name":"crosslinked L-lysine residue","termid":"MOD:02051"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:01875"}],"interesting_parent_ids":["MOD:01875"],"is_obsolete":false,"name":"ubiquitination signature tetrapeptidyl lysine","synonyms":[{"name":"LeuArgGlyGly","type":"related"},{"name":"Ubiquitination","type":"related"}],"termid":"MOD:01240"}


id: PBO:0077312
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 50B","termid":"PBO:0077312"}


id: PBO:0077695
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TNK2 antisense RNA 1","termid":"PBO:0077695"}


id: GO:0052360
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways performed by an organism resulting in the breakdown of macromolecules within the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["ISBN:0198547684"],"gene_count":0,"genotype_count":0,"name":"obsolete catabolism by host of symbiont macromolecule (obsolete GO:0052360)","termid":"GO:0052360"}


id: PBO:0049329
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"general transcription factor IIF subunit 1","termid":"PBO:0049329"}


id: GO:0141024
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The attachment of a symbiont to its host by binding to a carbohydrate on the host cell surface. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:30736336","PMID:15210807","PMID:19527885"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adhesion of symbiont to host cell","termid":"GO:0044650"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"adhesion of symbiont to host cell surface via host membrane carbohydrate","termid":"GO:0141024"}


id: GO:0002032
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process that inhibits the signaling function of a G protein-coupled receptor by uncoupling the receptor from its downstream G proteins.","definition_xrefs":["PMID:8396717","GOC:dph","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete desensitization of G protein-coupled receptor signaling pathway by arrestin (obsolete GO:0002032)","synonyms":[{"name":"arrestin mediated desensitisation of G-protein coupled receptor protein signalling pathway","type":"exact"},{"name":"arrestin mediated desensitization of G-protein coupled receptor protein signaling pathway","type":"exact"},{"name":"arrestin-mediated desensitization of G-protein coupled receptor protein signaling pathway","type":"exact"},{"name":"desensitization of G-protein coupled receptor protein signaling pathway by arrestin","type":"exact"}],"termid":"GO:0002032"}


id: MONDO:0017431
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete non-syndromic limb overgrowth (obsolete MONDO:0017431)","secondary_identifiers":["Orphanet:294953"],"synonyms":[{"name":"limb overgrowth","type":"related"}],"termid":"MONDO:0017431","xrefs":{"Monarch":{"xref_id":"0017431"}}}


id: MONDO:0022772
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A vascular sarcoma that commonly occurs in the lower extremities. It occurs predominantly in elderly male patients of southern European ancestry. It is characterized by the presence of purple, red-blue, or dark brown macular lesions, plaques and nodules. This disease is usually slow growing, although it can spread to the lungs and the gastrointestinal tract. If necessary, cutaneous lesions can be treated with radiation.","definition_xrefs":["NCIT:C9112"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Kaposi's sarcoma","termid":"MONDO:0005055"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"classic Kaposi sarcoma","secondary_identifiers":["UMLS:C0279084","MEDGEN:78931","icd11.foundation:1595913346"],"synonyms":[{"name":"Kaposi sarcoma classical type","type":"exact"},{"name":"Kaposi sarcoma, classic","type":"exact"},{"name":"Kaposi's sarcoma, classical type","type":"exact"},{"name":"classic Kaposi sarcoma","type":"exact"},{"name":"classic Kaposi's sarcoma","type":"exact"}],"termid":"MONDO:0022772","xrefs":{"Monarch":{"xref_id":"0022772"}}}


id: GO:1901234
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of convergent extension involved in axis elongation.","definition_xrefs":["GOC:BHF","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental growth","termid":"GO:0048639"},{"relation_name":"is_a","term_name":"regulation of convergent extension involved in axis elongation","termid":"GO:1901232"},{"relation_name":"is_a","term_name":"positive regulation of morphogenesis of an epithelium","termid":"GO:1905332"},{"relation_name":"positively_regulates","term_name":"convergent extension involved in axis elongation","termid":"GO:0060028"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of convergent extension involved in axis elongation","synonyms":[{"name":"activation of convergent extension involved in axis elongation","type":"narrow"},{"name":"up regulation of convergent extension involved in axis elongation","type":"exact"},{"name":"up-regulation of convergent extension involved in axis elongation","type":"exact"},{"name":"upregulation of convergent extension involved in axis elongation","type":"exact"}],"termid":"GO:1901234"}


id: GO:0002632
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of granuloma formation.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of granuloma formation","termid":"GO:0002631"},{"relation_name":"is_a","term_name":"negative regulation of chronic inflammatory response","termid":"GO:0002677"},{"relation_name":"is_a","term_name":"negative regulation of immune effector process","termid":"GO:0002698"},{"relation_name":"negatively_regulates","term_name":"granuloma formation","termid":"GO:0002432"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of granuloma formation","synonyms":[{"name":"down regulation of granuloma formation","type":"exact"},{"name":"down-regulation of granuloma formation","type":"exact"},{"name":"downregulation of granuloma formation","type":"exact"},{"name":"inhibition of granuloma formation","type":"narrow"}],"termid":"GO:0002632"}


id: PBO:0110570
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone demethylase, Jmjc domain Epe1","termid":"PBO:0110570"}


id: PR:O13963
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A diphosphomevalonate decarboxylase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01270","PANTHER:PTHR10977:SF2","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diphosphomevalonate decarboxylase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC24C9.03","secondary_identifiers":["UniProtKB:O13963"],"synonyms":[{"name":"MDDase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-MVD","type":"exact"},{"name":"mevalonate pyrophosphate decarboxylase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"mevalonate-5-diphosphate decarboxylase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13963"}


id: PBO:0056666
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit 28 pseudogene 4","termid":"PBO:0056666"}


id: PBO:0059217
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MARCKS cis regulating lncRNA promoter of cytokines and inflammation","termid":"PBO:0059217"}


id: PBO:0113279
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Plasma membrane transporter of the major facilitator superfamily; involved in the excretion of excess amino acids; member of the 12-spanner drug:H(+) antiporter DHA1 family; confers resistance to short-chain monocarboxylic acids and quinidine; relocalizes from plasma membrane to cytoplasm upon DNA replication stress; AQR1 has a paralog, QDR1, that arose from the whole genome duplication","termid":"PBO:0113279"}


id: GO:0043798
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-glycerate + ATP = 2-phospho-D-glycerate + ADP.","definition_xrefs":["PMID:14413719","RHEA:27377"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on other nitrogenous compounds as donors, cytochrome as acceptor","termid":"GO:0016662"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016301","GO:0016740","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"glycerate 2-kinase activity","secondary_identifiers":["EC:2.7.1.165","MetaCyc:GKI-RXN"],"synonyms":[{"name":"D-glycerate 2-kinase activity","type":"exact"},{"name":"glycerate kinase","type":"broad"}],"termid":"GO:0043798"}


id: GO:0070161
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cell junction that mechanically attaches a cell (and its cytoskeleton) to neighboring cells or to the extracellular matrix.","definition_xrefs":["ISBN:0815332181"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell junction","termid":"GO:0030054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"anchoring junction","synonyms":[{"name":"anchoring cell junction","type":"exact"}],"termid":"GO:0070161"}


id: PBO:0077113
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translocase of inner mitochondrial membrane 22","termid":"PBO:0077113"}


id: PBO:0051819
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 1 receptor associated kinase 4","termid":"PBO:0051819"}


id: SO:0000905
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute describing the status of a feature, based on the available evidence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"feature_attribute","termid":"SO:0000733"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"status","termid":"SO:0000905"}


id: PR:Q09874
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC12G12.11c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09874"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C12G12.11c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC12G12.11c","synonyms":[{"name":"Spom972h-SPAC12G12.11c","type":"exact"}],"termid":"PR:Q09874"}


id: MONDO:0019755
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id: GO:0002324
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The expansion of a natural killer cell population by cell division as part of an immune response.","definition_xrefs":["GOC:add","PMID:15032583"],"direct_ancestors":[{"relation_name":"is_a","term_name":"natural killer cell proliferation","termid":"GO:0001787"},{"relation_name":"is_a","term_name":"lymphocyte activation involved in immune response","termid":"GO:0002285"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"natural killer cell proliferation involved in immune response","synonyms":[{"name":"NK cell proliferation during immune response","type":"related"},{"name":"natural killer cell proliferation during immune response","type":"related"}],"termid":"GO:0002324"}


id: MONDO:1010953
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Schwannomatosis that occurs in cattle.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bovine neoplasm","termid":"MONDO:0700134"},{"relation_name":"is_a","term_name":"schwannomatosis, non-human animal","termid":"MONDO:1010217"},{"relation_name":"is_a","term_name":"neurofibromatosis, cattle","termid":"MONDO:1011566"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"schwannomatosis, cattle","secondary_identifiers":["OMIA:001963-9913"],"termid":"MONDO:1010953","xrefs":{"Monarch":{"xref_id":"1010953"}}}


id: PBO:0005784
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor TFIIF complex alpha subunit Tfg1 (predicted)","termid":"PBO:0005784"}


id: MONDO:0014345
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any retinitis pigmentosa in which the cause of the disease is a mutation in the KIZ gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinitis pigmentosa","termid":"MONDO:0019200"},{"relation_name":"is_a","term_name":"KIZ-related retinopathy","termid":"MONDO:0700232"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004736","MONDO:0005328"],"is_obsolete":false,"name":"retinitis pigmentosa 69","secondary_identifiers":["GARD:16011","MEDGEN:862749","UMLS:C4014312","DOID:0110410","ICD10CM:H35.5","OMIM:615780"],"synonyms":[{"name":"KIZ retinitis pigmentosa","type":"exact"},{"name":"RP69","type":"exact"},{"name":"retinitis pigmentosa 69","type":"exact"},{"name":"retinitis pigmentosa caused by mutation in KIZ","type":"exact"},{"name":"retinitis pigmentosa type 69","type":"exact"}],"termid":"MONDO:0014345","xrefs":{"Monarch":{"xref_id":"0014345"}}}


id: MONDO:0019585
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Scleromyxedema without monoclonal gammopathy is a form of atypical lichen myxedematosus, characterized by a generalized sclerodermoid infiltration of skin studded with multiple, firm papules of 1-3 mm in diameter involving face (leonine appearance), trunk, and limbs, without monoclonal gammopathy. The involvement of the face can be missing and pruritus may be prominent.","definition_xrefs":["Orphanet:90400"],"direct_ancestors":[{"relation_name":"is_a","term_name":"atypical lichen myxedematosus","termid":"MONDO:0019447"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"scleromyxedema without monoclonal gammopathy","secondary_identifiers":["UMLS:C5681463","GARD:19144","MEDGEN:1843341"],"termid":"MONDO:0019585","xrefs":{"Monarch":{"xref_id":"0019585"}}}


id: PBO:0078531
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 24","termid":"PBO:0078531"}


id: PBO:0031196
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_dithiothreitol","termid":"PBO:0031196"}


id: GO:0051233
data:
  {"annotated_genes":["SJAG_04841","SJAG_00723","SJAG_00930","SJAG_01297","SJAG_02266","SJAG_04412","SJAG_02542","SJAG_04745","SJAG_03048","SJAG_00697","SJAG_03073","SJAG_00082","SJAG_01371","SJAG_01805","SJAG_01429","SJAG_02045","SJAG_02336","SJAG_04140","SJAG_01837"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[117047,103901,101786,119071],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990385"},{"annotations":[108625,76701,89982,90349,91341,103903,95133,102710,111570,94155,117953,100899,119073,91742,79261,77556,112275,117048,101409],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990023"}]},"cv_name":"cellular_component","definition":"The area in the center of the spindle where the spindle microtubules from opposite poles overlap.","definition_xrefs":["GOC:ai","PMID:15296749"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"spindle","termid":"GO:0005819"}],"gene_count":19,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_00697":null,"SJAG_00723":null,"SJAG_00930":null,"SJAG_01297":null,"SJAG_01371":null,"SJAG_01429":null,"SJAG_01805":null,"SJAG_01837":null,"SJAG_02045":null,"SJAG_02266":null,"SJAG_02336":null,"SJAG_02542":null,"SJAG_03048":null,"SJAG_03073":null,"SJAG_04140":null,"SJAG_04412":null,"SJAG_04745":null,"SJAG_04841":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0015630"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0015630"],"is_obsolete":false,"name":"spindle midzone","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"central spindle","type":"exact"},{"name":"spindle equator","type":"exact"}],"termid":"GO:0051233","terms_by_termid":{"GO:1990023":null,"GO:1990385":null}}


id: PBO:0079649
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 S pseudogene 2","termid":"PBO:0079649"}


id: MONDO:1010846
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A lysosomal storage disease in cats due to a mutation in the GLB1 gene. There is a buildup of GM1 gangliosides in tissues due to a lack of the enzyme beta-galactosidase. It is characterised by progressive neuromuscular dysfunction and impaired growth from an early age.","definition_xrefs":["OMIA:000402-9685"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gangliosidosis, domestic cat","termid":"MONDO:1010841"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GM1 gangliosidosis, GLB1-related, domestic cat","synonyms":[{"name":"gangliosidosis GM1, domestic cat","type":"related"}],"termid":"MONDO:1010846","xrefs":{"Monarch":{"xref_id":"1010846"}}}


id: PATO:0001286
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color consisting of yellow hue and low saturation.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"yellow","termid":"PATO:0000324"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"desaturated yellow","synonyms":[{"name":"pale yellow","type":"exact"}],"termid":"PATO:0001286"}


id: GO:1905426
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of Wnt signaling pathway involved in midbrain dopaminergic neuron differentiation.","definition_xrefs":["GOC:TermGenie","GOC:bf","PMID:17244647","GO_REF:0000058","GOC:PARL"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of Wnt-mediated midbrain dopaminergic neuron differentiation (obsolete GO:1905426)","synonyms":[{"name":"activation of Wg signaling pathway involved in DA neurogenesis from midbrain floor plate","type":"narrow"},{"name":"activation of Wg signaling pathway involved in mDA neuron differentiation","type":"narrow"},{"name":"activation of Wg signaling pathway involved in midbrain DA neurogenesis","type":"narrow"},{"name":"activation of Wg signaling pathway involved in midbrain dopaminergic neuron differentiation","type":"narrow"},{"name":"activation of Wg signaling pathway involved in midbrain dopaminergic neuron production","type":"narrow"},{"name":"activation of Wg signalling pathway involved in DA neurogenesis from midbrain floor plate","type":"narrow"},{"name":"activation of Wg signalling pathway involved in mDA neuron differentiation","type":"narrow"},{"name":"activation of Wg signalling pathway involved in midbrain DA neurogenesis","type":"narrow"},{"name":"activation of Wg signalling pathway involved in midbrain dopaminergic neuron differentiation","type":"narrow"},{"name":"activation of Wg signalling pathway involved in midbrain dopaminergic neuron production","type":"narrow"},{"name":"activation of Wingless signaling pathway involved in DA neurogenesis from midbrain floor plate","type":"narrow"},{"name":"activation of Wingless signaling pathway involved in mDA neuron differentiation","type":"narrow"},{"name":"activation of Wingless signaling pathway involved in midbrain DA neurogenesis","type":"narrow"},{"name":"activation of Wingless signaling pathway involved in midbrain dopaminergic neuron differentiation","type":"narrow"},{"name":"activation of Wingless signaling pathway involved in midbrain dopaminergic neuron production","type":"narrow"},{"name":"activation of Wingless signalling pathway involved in DA neurogenesis from midbrain floor plate","type":"narrow"},{"name":"activation of Wingless signalling pathway involved in mDA neuron differentiation","type":"narrow"},{"name":"activation of Wingless signalling pathway involved in midbrain DA neurogenesis","type":"narrow"},{"name":"activation of Wingless signalling pathway involved in midbrain dopaminergic neuron differentiation","type":"narrow"},{"name":"activation of Wingless signalling pathway involved in midbrain dopaminergic neuron production","type":"narrow"},{"name":"activation of Wnt receptor signaling pathway involved in DA neurogenesis from midbrain floor plate","type":"narrow"},{"name":"activation of Wnt receptor signaling pathway involved in mDA neuron differentiation","type":"narrow"},{"name":"activation of Wnt receptor signaling pathway involved in midbrain DA neurogenesis","type":"narrow"},{"name":"activation of Wnt receptor signaling pathway involved in midbrain dopaminergic neuron differentiation","type":"narrow"},{"name":"activation of Wnt receptor signaling pathway involved in midbrain dopaminergic neuron production","type":"narrow"},{"name":"activation of Wnt receptor signalling pathway involved in DA neurogenesis from midbrain floor plate","type":"narrow"},{"name":"activation of Wnt receptor signalling pathway involved in mDA neuron differentiation","type":"narrow"},{"name":"activation of Wnt receptor signalling pathway involved in midbrain DA neurogenesis","type":"narrow"},{"name":"activation of Wnt receptor signalling pathway involved in midbrain dopaminergic neuron differentiation","type":"narrow"},{"name":"activation of Wnt receptor signalling pathway involved in midbrain dopaminergic neuron production","type":"narrow"},{"name":"activation of Wnt signaling pathway involved in DA neurogenesis from midbrain floor plate","type":"narrow"},{"name":"activation of Wnt signaling pathway involved in mDA neuron differentiation","type":"narrow"},{"name":"activation of Wnt signaling pathway involved in midbrain DA neurogenesis","type":"narrow"},{"name":"activation of Wnt signaling pathway involved in midbrain dopaminergic neuron differentiation","type":"narrow"},{"name":"activation of Wnt signaling pathway involved in midbrain dopaminergic neuron production","type":"narrow"},{"name":"activation of Wnt-activated signaling pathway involved in DA neurogenesis from midbrain floor plate","type":"related"},{"name":"activation of Wnt-activated signaling pathway involved in mDA neuron differentiation","type":"related"},{"name":"activation of Wnt-activated signaling pathway involved in midbrain DA neurogenesis","type":"related"},{"name":"activation of Wnt-activated signaling pathway involved in midbrain dopaminergic neuron differentiation","type":"related"},{"name":"activation of Wnt-activated signaling pathway involved in midbrain dopaminergic neuron production","type":"related"},{"name":"activation of Wnt-mediated midbrain DA neuron differentiation","type":"narrow"},{"name":"activation of frizzled signaling pathway involved in DA neurogenesis from midbrain floor plate","type":"narrow"},{"name":"activation of frizzled signaling pathway involved in mDA neuron differentiation","type":"narrow"},{"name":"activation of frizzled signaling pathway involved in midbrain DA neurogenesis","type":"narrow"},{"name":"activation of frizzled signaling pathway involved in midbrain dopaminergic neuron differentiation","type":"narrow"},{"name":"activation of frizzled signaling pathway involved in midbrain dopaminergic neuron production","type":"narrow"},{"name":"activation of frizzled signalling pathway involved in DA neurogenesis from midbrain floor plate","type":"narrow"},{"name":"activation of frizzled signalling pathway involved in mDA neuron differentiation","type":"narrow"},{"name":"activation of frizzled signalling pathway involved in midbrain DA neurogenesis","type":"narrow"},{"name":"activation of frizzled signalling pathway involved in midbrain dopaminergic neuron differentiation","type":"narrow"},{"name":"activation of frizzled signalling pathway involved in midbrain dopaminergic neuron production","type":"narrow"},{"name":"positive regulation of Wg signaling pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"positive regulation of Wg signaling pathway involved in mDA neuron differentiation","type":"exact"},{"name":"positive regulation of Wg signaling pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"positive regulation of Wg signaling pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"positive regulation of Wg signaling pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"positive regulation of Wg signalling pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"positive regulation of Wg signalling pathway involved in mDA neuron differentiation","type":"exact"},{"name":"positive regulation of Wg signalling pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"positive regulation of Wg signalling pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"positive regulation of Wg signalling pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"positive regulation of Wingless signaling pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"positive regulation of Wingless signaling pathway involved in mDA neuron differentiation","type":"exact"},{"name":"positive regulation of Wingless signaling pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"positive regulation of Wingless signaling pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"positive regulation of Wingless signaling pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"positive regulation of Wingless signalling pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"positive regulation of Wingless signalling pathway involved in mDA neuron differentiation","type":"exact"},{"name":"positive regulation of Wingless signalling pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"positive regulation of Wingless signalling pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"positive regulation of Wingless signalling pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"positive regulation of Wnt receptor signaling pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"positive regulation of Wnt receptor signaling pathway involved in mDA neuron differentiation","type":"exact"},{"name":"positive regulation of Wnt receptor signaling pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"positive regulation of Wnt receptor signaling pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"positive regulation of Wnt receptor signaling pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"positive regulation of Wnt receptor signalling pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"positive regulation of Wnt receptor signalling pathway involved in mDA neuron differentiation","type":"exact"},{"name":"positive regulation of Wnt receptor signalling pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"positive regulation of Wnt receptor signalling pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"positive regulation of Wnt receptor signalling pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"positive regulation of Wnt signaling pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"positive regulation of Wnt signaling pathway involved in mDA neuron differentiation","type":"exact"},{"name":"positive regulation of Wnt signaling pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"positive regulation of Wnt signaling pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"positive regulation of Wnt signaling pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"positive regulation of Wnt-activated signaling pathway involved in DA neurogenesis from midbrain floor plate","type":"related"},{"name":"positive regulation of Wnt-activated signaling pathway involved in mDA neuron differentiation","type":"related"},{"name":"positive regulation of Wnt-activated signaling pathway involved in midbrain DA neurogenesis","type":"related"},{"name":"positive regulation of Wnt-activated signaling pathway involved in midbrain dopaminergic neuron differentiation","type":"related"},{"name":"positive regulation of Wnt-activated signaling pathway involved in midbrain dopaminergic neuron production","type":"related"},{"name":"positive regulation of Wnt-mediated midbrain DA neuron differentiation","type":"exact"},{"name":"positive regulation of frizzled signaling pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"positive regulation of frizzled signaling pathway involved in mDA neuron differentiation","type":"exact"},{"name":"positive regulation of frizzled signaling pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"positive regulation of frizzled signaling pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"positive regulation of frizzled signaling pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"positive regulation of frizzled signalling pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"positive regulation of frizzled signalling pathway involved in mDA neuron differentiation","type":"exact"},{"name":"positive regulation of frizzled signalling pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"positive regulation of frizzled signalling pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"positive regulation of frizzled signalling pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"positive regulation of midbrain dopaminergic neuron differentiation by positive regulation of Wnt signaling","type":"related"},{"name":"up regulation of Wg signaling pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"up regulation of Wg signaling pathway involved in mDA neuron differentiation","type":"exact"},{"name":"up regulation of Wg signaling pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"up regulation of Wg signaling pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"up regulation of Wg signaling pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"up regulation of Wg signalling pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"up regulation of Wg signalling pathway involved in mDA neuron differentiation","type":"exact"},{"name":"up regulation of Wg signalling pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"up regulation of Wg signalling pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"up regulation of Wg signalling pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"up regulation of Wingless signaling pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"up regulation of Wingless signaling pathway involved in mDA neuron differentiation","type":"exact"},{"name":"up regulation of Wingless signaling pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"up regulation of Wingless signaling pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"up regulation of Wingless signaling pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"up regulation of Wingless signalling pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"up regulation of Wingless signalling pathway involved in mDA neuron differentiation","type":"exact"},{"name":"up regulation of Wingless signalling pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"up regulation of Wingless signalling pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"up regulation of Wingless signalling pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"up regulation of Wnt receptor signaling pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"up regulation of Wnt receptor signaling pathway involved in mDA neuron differentiation","type":"exact"},{"name":"up regulation of Wnt receptor signaling pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"up regulation of Wnt receptor signaling pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"up regulation of Wnt receptor signaling pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"up regulation of Wnt receptor signalling pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"up regulation of Wnt receptor signalling pathway involved in mDA neuron differentiation","type":"exact"},{"name":"up regulation of Wnt receptor signalling pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"up regulation of Wnt receptor signalling pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"up regulation of Wnt receptor signalling pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"up regulation of Wnt signaling pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"up regulation of Wnt signaling pathway involved in mDA neuron differentiation","type":"exact"},{"name":"up regulation of Wnt signaling pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"up regulation of Wnt signaling pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"up regulation of Wnt signaling pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"up regulation of Wnt-activated signaling pathway involved in DA neurogenesis from midbrain floor plate","type":"related"},{"name":"up regulation of Wnt-activated signaling pathway involved in mDA neuron differentiation","type":"related"},{"name":"up regulation of Wnt-activated signaling pathway involved in midbrain DA neurogenesis","type":"related"},{"name":"up regulation of Wnt-activated signaling pathway involved in midbrain dopaminergic neuron differentiation","type":"related"},{"name":"up regulation of Wnt-activated signaling pathway involved in midbrain dopaminergic neuron production","type":"related"},{"name":"up regulation of Wnt-mediated midbrain DA neuron differentiation","type":"exact"},{"name":"up regulation of frizzled signaling pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"up regulation of frizzled signaling pathway involved in mDA neuron differentiation","type":"exact"},{"name":"up regulation of frizzled signaling pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"up regulation of frizzled signaling pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"up regulation of frizzled signaling pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"up regulation of frizzled signalling pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"up regulation of frizzled signalling pathway involved in mDA neuron differentiation","type":"exact"},{"name":"up regulation of frizzled signalling pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"up regulation of frizzled signalling pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"up regulation of frizzled signalling pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"up-regulation of Wg signaling pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"up-regulation of Wg signaling pathway involved in mDA neuron differentiation","type":"exact"},{"name":"up-regulation of Wg signaling pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"up-regulation of Wg signaling pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"up-regulation of Wg signaling pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"up-regulation of Wg signalling pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"up-regulation of Wg signalling pathway involved in mDA neuron differentiation","type":"exact"},{"name":"up-regulation of Wg signalling pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"up-regulation of Wg signalling pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"up-regulation of Wg signalling pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"up-regulation of Wingless signaling pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"up-regulation of Wingless signaling pathway involved in mDA neuron differentiation","type":"exact"},{"name":"up-regulation of Wingless signaling pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"up-regulation of Wingless signaling pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"up-regulation of Wingless signaling pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"up-regulation of Wingless signalling pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"up-regulation of Wingless signalling pathway involved in mDA neuron differentiation","type":"exact"},{"name":"up-regulation of Wingless signalling pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"up-regulation of Wingless signalling pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"up-regulation of Wingless signalling pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"up-regulation of Wnt receptor signaling pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"up-regulation of Wnt receptor signaling pathway involved in mDA neuron differentiation","type":"exact"},{"name":"up-regulation of Wnt receptor signaling pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"up-regulation of Wnt receptor signaling pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"up-regulation of Wnt receptor signaling pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"up-regulation of Wnt receptor signalling pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"up-regulation of Wnt receptor signalling pathway involved in mDA neuron differentiation","type":"exact"},{"name":"up-regulation of Wnt receptor signalling pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"up-regulation of Wnt receptor signalling pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"up-regulation of Wnt receptor signalling pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"up-regulation of Wnt signaling pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"up-regulation of Wnt signaling pathway involved in mDA neuron differentiation","type":"exact"},{"name":"up-regulation of Wnt signaling pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"up-regulation of Wnt signaling pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"up-regulation of Wnt signaling pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"up-regulation of Wnt-activated signaling pathway involved in DA neurogenesis from midbrain floor plate","type":"related"},{"name":"up-regulation of Wnt-activated signaling pathway involved in mDA neuron differentiation","type":"related"},{"name":"up-regulation of Wnt-activated signaling pathway involved in midbrain DA neurogenesis","type":"related"},{"name":"up-regulation of Wnt-activated signaling pathway involved in midbrain dopaminergic neuron differentiation","type":"related"},{"name":"up-regulation of Wnt-activated signaling pathway involved in midbrain dopaminergic neuron production","type":"related"},{"name":"up-regulation of Wnt-mediated midbrain DA neuron differentiation","type":"exact"},{"name":"up-regulation of frizzled signaling pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"up-regulation of frizzled signaling pathway involved in mDA neuron differentiation","type":"exact"},{"name":"up-regulation of frizzled signaling pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"up-regulation of frizzled signaling pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"up-regulation of frizzled signaling pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"up-regulation of frizzled signalling pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"up-regulation of frizzled signalling pathway involved in mDA neuron differentiation","type":"exact"},{"name":"up-regulation of frizzled signalling pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"up-regulation of frizzled signalling pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"up-regulation of frizzled signalling pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"upregulation of Wg signaling pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"upregulation of Wg signaling pathway involved in mDA neuron differentiation","type":"exact"},{"name":"upregulation of Wg signaling pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"upregulation of Wg signaling pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"upregulation of Wg signaling pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"upregulation of Wg signalling pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"upregulation of Wg signalling pathway involved in mDA neuron differentiation","type":"exact"},{"name":"upregulation of Wg signalling pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"upregulation of Wg signalling pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"upregulation of Wg signalling pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"upregulation of Wingless signaling pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"upregulation of Wingless signaling pathway involved in mDA neuron differentiation","type":"exact"},{"name":"upregulation of Wingless signaling pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"upregulation of Wingless signaling pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"upregulation of Wingless signaling pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"upregulation of Wingless signalling pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"upregulation of Wingless signalling pathway involved in mDA neuron differentiation","type":"exact"},{"name":"upregulation of Wingless signalling pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"upregulation of Wingless signalling pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"upregulation of Wingless signalling pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"upregulation of Wnt receptor signaling pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"upregulation of Wnt receptor signaling pathway involved in mDA neuron differentiation","type":"exact"},{"name":"upregulation of Wnt receptor signaling pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"upregulation of Wnt receptor signaling pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"upregulation of Wnt receptor signaling pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"upregulation of Wnt receptor signalling pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"upregulation of Wnt receptor signalling pathway involved in mDA neuron differentiation","type":"exact"},{"name":"upregulation of Wnt receptor signalling pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"upregulation of Wnt receptor signalling pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"upregulation of Wnt receptor signalling pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"upregulation of Wnt signaling pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"upregulation of Wnt signaling pathway involved in mDA neuron differentiation","type":"exact"},{"name":"upregulation of Wnt signaling pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"upregulation of Wnt signaling pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"upregulation of Wnt signaling pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"upregulation of Wnt-activated signaling pathway involved in DA neurogenesis from midbrain floor plate","type":"related"},{"name":"upregulation of Wnt-activated signaling pathway involved in mDA neuron differentiation","type":"related"},{"name":"upregulation of Wnt-activated signaling pathway involved in midbrain DA neurogenesis","type":"related"},{"name":"upregulation of Wnt-activated signaling pathway involved in midbrain dopaminergic neuron differentiation","type":"related"},{"name":"upregulation of Wnt-activated signaling pathway involved in midbrain dopaminergic neuron production","type":"related"},{"name":"upregulation of Wnt-mediated midbrain DA neuron differentiation","type":"exact"},{"name":"upregulation of frizzled signaling pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"upregulation of frizzled signaling pathway involved in mDA neuron differentiation","type":"exact"},{"name":"upregulation of frizzled signaling pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"upregulation of frizzled signaling pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"upregulation of frizzled signaling pathway involved in midbrain dopaminergic neuron production","type":"exact"},{"name":"upregulation of frizzled signalling pathway involved in DA neurogenesis from midbrain floor plate","type":"exact"},{"name":"upregulation of frizzled signalling pathway involved in mDA neuron differentiation","type":"exact"},{"name":"upregulation of frizzled signalling pathway involved in midbrain DA neurogenesis","type":"exact"},{"name":"upregulation of frizzled signalling pathway involved in midbrain dopaminergic neuron differentiation","type":"exact"},{"name":"upregulation of frizzled signalling pathway involved in midbrain dopaminergic neuron production","type":"exact"}],"termid":"GO:1905426"}


id: PR:Q9UUJ5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mrpl25 gene.","definition_xrefs":["UniProtKB:Q9UUJ5","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"54S ribosomal protein L25, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1952.14c","synonyms":[{"name":"Spom972h-mrpl25","type":"exact"}],"termid":"PR:Q9UUJ5"}


id: GO:0072490
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving toluene, methylbenzene (formula C7H8), or any of its derivatives.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benzene-containing compound metabolic process","termid":"GO:0042537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"toluene-containing compound metabolic process","synonyms":[{"name":"toluene and derivative metabolic process","type":"exact"},{"name":"toluene-containing compound metabolism","type":"exact"}],"termid":"GO:0072490"}


id: PATO:0002074
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An avidity which is relatively high.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"avidity","termid":"PATO:0002073"},{"relation_name":"is_a","term_name":"increased object quality","termid":"PATO:0002305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased avidity","termid":"PATO:0002074"}


id: GO:0047468
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: glucose-1-phosphate = glucose-6-phosphate; using D-glucose as a cofactor.","definition_xrefs":["EC:5.4.2.5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphoglucomutase activity","termid":"GO:0004614"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016853"],"is_obsolete":false,"name":"phosphoglucomutase (glucose-cofactor) activity","secondary_identifiers":["MetaCyc:RXN-16999"],"synonyms":[{"name":"alpha-D-glucose 1,6-phosphomutase (glucose-cofactor)","type":"related"},{"name":"glucose-1-phosphate phosphotransferase activity","type":"related"}],"termid":"GO:0047468"}


id: GO:0039602
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a virus stops, prevents, or reduces the frequency, rate or extent of the assembly of the RNA polymerase II preinitiation complex (PIC) at an RNA polymerase II promoter region of a host DNA template. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:1316611"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host gene expression","termid":"GO:0039656"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host transcription initiation from RNA polymerase II promoter","secondary_identifiers":["VZ:904","GO:0039601"],"synonyms":[{"name":"inhibition of host transcription initiation by virus","type":"narrow"},{"name":"suppression by virus of host DNA-dependent transcription, initiation","type":"narrow"},{"name":"suppression by virus of host transcription initiation from RNA polymerase II promoter","type":"narrow"}],"termid":"GO:0039602"}


id: PBO:0085752
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein kinase; related to and functionally redundant with Elm1p and Sak1p for the phosphorylation and activation of Snf1p; functionally orthologous to LKB1, a mammalian kinase associated with Peutz-Jeghers cancer-susceptibility syndrome; TOS3 has a paralog, SAK1, that arose from the whole genome duplication","termid":"PBO:0085752"}


id: PBO:0035723
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_glycosylation_during_vegetative_growth","termid":"PBO:0035723"}


id: GO:0009361
data:
  {"annotated_genes":["SJAG_03813","SJAG_01524"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[75720,115354],"is_not":false,"summary":null,"term":"GO:0009361"}]},"cv_name":"cellular_component","definition":"A heterodimeric enzyme complex, composed of an alpha and beta chain, most usually found in (but not limited to) bacteria. Functions in the TCA cycle, hydrolyzing succinyl-CoA into succinate and CoA, thereby forming ATP.","definition_xrefs":["GOC:jl","PMID:9874242"],"direct_ancestors":[{"relation_name":"is_a","term_name":"succinate-CoA ligase complex","termid":"GO:0042709"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01524":null,"SJAG_03813":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0032991"],"is_obsolete":false,"name":"succinate-CoA ligase complex (ADP-forming)","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"succinyl-CoA synthetase, ADP-forming","type":"exact"}],"termid":"GO:0009361","terms_by_termid":{"GO:0009361":null}}


id: PBO:0055981
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat neuronal 4","termid":"PBO:0055981"}


id: GO:0005153
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an interleukin-8 receptor.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CXCR chemokine receptor binding","termid":"GO:0045236"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"interleukin-8 receptor binding","synonyms":[{"name":"IL-8","type":"narrow"},{"name":"interleukin-8 receptor ligand","type":"narrow"}],"termid":"GO:0005153"}


id: PBO:0028419
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_nitrogen_starvation","termid":"PBO:0028419"}


id: PBO:0002399
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6.1.1.11","termid":"PBO:0002399"}


id: PBO:0003015
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NAD-dependent malic enzyme (predicted), partial","termid":"PBO:0003015"}


id: PBO:0113457
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of nuclear RNase P; nuclear RNase P cleaves tRNA precursors to generate mature 5' ends and facilitates turnover of nuclear RNAs; not shared between RNase MRP and RNase P, in contrast to all other RNase P protein subunits; increases the activity and thermal stability of the complex, along with Pop2p; protein abundance increases in response to DNA replication stress","termid":"PBO:0113457"}


id: MONDO:0025382
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Connective tissue tumors, affecting primarily fowl, that are usually caused by avian sarcoma viruses.","definition_xrefs":["MESH:D001357"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bird disease","termid":"MONDO:0024905"},{"relation_name":"is_a","term_name":"sarcoma, non-human animal","termid":"MONDO:0700131"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sarcoma, avian","synonyms":[{"name":"Avian sarcoma","type":"related"},{"name":"Avian sarcomas","type":"related"},{"name":"Rous sarcoma","type":"related"},{"name":"sarcoma, Rous","type":"related"},{"name":"sarcomas, Avian","type":"related"}],"termid":"MONDO:0025382","xrefs":{"Monarch":{"xref_id":"0025382"}}}


id: PBO:0074354
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMC2 divergent transcript","termid":"PBO:0074354"}


id: PBO:0089371
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial copper chaperone for cytochrome c oxidase Cox19","termid":"PBO:0089371"}


id: MONDO:0044975
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete disease of transporter activity (obsolete MONDO:0044975)","termid":"MONDO:0044975","xrefs":{"Monarch":{"xref_id":"0044975"}}}


id: PBO:0069584
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 858, pseudogene","termid":"PBO:0069584"}


id: PBO:0045146
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein axonemal heavy chain 3","termid":"PBO:0045146"}


id: SO:0001341
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"4_demethylwyosine is a modified guanosine base feature.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_guanosine","termid":"SO:0001276"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"four_demethylwyosine","secondary_identifiers":["RNAMOD:100"],"synonyms":[{"name":"4-demethylwyosine","type":"exact"},{"name":"four demethylwyosine","type":"exact"},{"name":"imG-14","type":"exact"}],"termid":"SO:0001341"}


id: PBO:0050558
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histidine rich calcium binding protein","termid":"PBO:0050558"}


id: MONDO:0018950
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"3-methylcrotonyl-CoA carboxylase deficiency (3-MCCD) is an inherited disorder of leucine metabolism characterized by a highly variable clinical picture ranging from metabolic crisis in infancy to asymptomatic adults.","definition_xrefs":["Orphanet:6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"classic organic aciduria","termid":"MONDO:0019215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004736"],"is_obsolete":false,"name":"3-methylcrotonyl-CoA carboxylase deficiency","secondary_identifiers":["SCTID:13144005","GARD:10954","UMLS:C4551505","DOID:0050710","NCIT:C98674","MEDGEN:1633312","NANDO:2200495","OMIMPS:210200"],"synonyms":[{"name":"3-MCC deficiency","type":"exact"},{"name":"3-methylcrotonyl-CoA carboxylase deficiency","type":"exact"},{"name":"3-methylcrotonylglycinuria","type":"exact"},{"name":"3MCC deficiency","type":"exact"},{"name":"BMCC deficiency","type":"exact"},{"name":"MCC deficiency","type":"exact"},{"name":"MCCD","type":"exact"},{"name":"Methylcrotonyl-CoA carboxylase deficiency","type":"exact"},{"name":"methylcrotonylglycinuria","type":"related"}],"termid":"MONDO:0018950","xrefs":{"Monarch":{"xref_id":"0018950"}}}


id: GO:0062226
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of adult somatic muscle development.","definition_xrefs":["PMID:25758712","PMID:16643882"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of somatic muscle development","termid":"GO:0062223"},{"relation_name":"regulates","term_name":"adult somatic muscle development","termid":"GO:0007527"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of adult somatic muscle development","termid":"GO:0062226"}


id: PBO:0010218
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gene merge, SPNCRNA.502 was a subsequence of SPNCRNA.1228","termid":"PBO:0010218"}


id: PBO:0054358
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1751","termid":"PBO:0054358"}


id: GO:0060932
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires the specialized structural and/or functional features of a cell of the His-Purkinje system. These cells form the fibers regulate cardiac muscle contraction in the ventricles.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac muscle cell differentiation","termid":"GO:0055007"},{"relation_name":"part_of","term_name":"His-Purkinje system development","termid":"GO:0003164"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"His-Purkinje system cell differentiation","termid":"GO:0060932"}


id: GO:0021724
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the inferior raphe nucleus over time, from its formation to the mature structure.","definition_xrefs":["GOC:jid","GOC:dgh","GOC:cvs","GOC:dph","GOC:cls","GO_REF:0000021","GOC:curators","PMID:19003874","GOC:cjm","ZFA:0000366"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neural nucleus development","termid":"GO:0048857"},{"relation_name":"part_of","term_name":"medullary reticular formation development","termid":"GO:0021723"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"inferior raphe nucleus development","synonyms":[{"name":"inferior central nucleus development","type":"broad"},{"name":"posterior raphe nucleus development","type":"broad"}],"termid":"GO:0021724"}


id: PBO:0069974
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1269, pseudogene","termid":"PBO:0069974"}


id: FYPO:0003760
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce a cell of normal morphology that undergoes one or two rounds of cell division, and all cells produced arrest the cell cycle with a cut phenotype, and then die.","definition_xrefs":["PomBase:vw","PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"cut","termid":"FYPO:0000229"},{"relation_name":"is_a","term_name":"abnormal mitotic sister chromatid segregation","termid":"FYPO:0000141"},{"relation_name":"is_a","term_name":"premature septum assembly","termid":"FYPO:0003250"},{"relation_name":"is_a","term_name":"inviable after spore germination, single or double cell division, arrest with single nucleus","termid":"FYPO:0003759"},{"relation_name":"is_a","term_name":"inviable mononucleate vegetative cell","termid":"FYPO:0006430"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0000032"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000631"},{"rel_name":"has_part","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000641"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000004","FYPO:0000337","FYPO:0005447","FYPO:0001985","FYPO:0000631","FYPO:0000032","FYPO:0000641"],"is_obsolete":false,"name":"inviable after spore germination, single or double cell division, arrest with cut","synonyms":[{"name":"inviable after spore germination, single or double cell division, arrest with septation following abnormal mitotic chromosome segregation","type":"exact"},{"name":"inviable following spore germination, single or double cell division, arrest with cut","type":"exact"},{"name":"inviable germinated spore, single or double cell division, arrest with cut","type":"exact"},{"name":"lethal after spore germination, single or double cell division, arrest with cut","type":"exact"}],"termid":"FYPO:0003760"}


id: PBO:0084160
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"High-affinity zinc transporter of the plasma membrane; responsible for the majority of zinc uptake; transcription is induced under low-zinc conditions by the Zap1p transcription factor","termid":"PBO:0084160"}


id: GO:1900778
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of fumiquinazoline A.","definition_xrefs":["GOC:TermGenie","GOC:di"],"gene_count":0,"genotype_count":0,"name":"obsolete fumiquinazoline A biosynthetic process (obsolete GO:1900778)","synonyms":[{"name":"fumiquinazoline A anabolism","type":"exact"},{"name":"fumiquinazoline A biosynthesis","type":"exact"},{"name":"fumiquinazoline A formation","type":"exact"},{"name":"fumiquinazoline A synthesis","type":"exact"}],"termid":"GO:1900778"}


id: PBO:0005797
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase Ppk34","termid":"PBO:0005797"}


id: PBO:0073960
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 22 member 9","termid":"PBO:0073960"}


id: MONDO:1011750
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"integumentary system disorder, non-human animal","termid":"MONDO:1011328"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"follicular dysplasia and interface dermatitis, non-human animal","secondary_identifiers":["OMIA:001369"],"termid":"MONDO:1011750","xrefs":{"Monarch":{"xref_id":"1011750"}}}


id: PBO:0074948
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 111B","termid":"PBO:0074948"}


id: PBO:0001149
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ammonium transporter Amt2","termid":"PBO:0001149"}


id: GO:0047386
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: beta-D-fructose 2,6-bisphosphate + H2O = beta-D-fructofuranose 2-phosphate + phosphate.","definition_xrefs":["RHEA:13333","EC:3.1.3.54"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sugar-phosphatase activity","termid":"GO:0050308"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0016788","GO:0003824"],"is_obsolete":false,"name":"fructose-2,6-bisphosphate 6-phosphatase activity","secondary_identifiers":["KEGG_REACTION:R02730","MetaCyc:3.1.3.54-RXN"],"synonyms":[{"name":"D-fructose-2,6-bisphosphate 6-phosphohydrolase activity","type":"related"},{"name":"beta-D-fructose-2,6-bisphosphate 6-phosphohydrolase activity","type":"related"},{"name":"fructose 2,6-bisphosphate-6-phosphohydrolase activity","type":"related"},{"name":"fructose-2,6-bisphosphate 6-phosphohydrolase activity","type":"related"}],"termid":"GO:0047386"}


id: GO:0035081
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process induced by hormones that directly activates any of the steps required for programmed cell death.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"induction of programmed cell death","termid":"GO:0012502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"induction of programmed cell death by hormones","termid":"GO:0035081"}


id: PBO:0061765
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ornithine decarboxylase antizyme 1","termid":"PBO:0061765"}


id: MONDO:0008874
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Bangstad syndrome is a rare endocrine disease characterized by the association of primordial birdheaded nanism, progressive ataxia, goiter, primary gonadal insufficiency and insulin resistant diabetes mellitus. Plasma concentrations of TSH, PTH, LH, FSH, ACTH, glucagon, and insulin are usually elevated. A generalized cell membrane defect was suggested to be the pathophysiological abnormality in these patients. The mode of inheritance was thought to be autosomal recessive. There have been no further descriptions in the literature since 1989.","definition_xrefs":["Orphanet:1227"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyendocrinopathy","termid":"MONDO:0015126"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Bangstad syndrome","secondary_identifiers":["ICD9:759.89","GARD:812","MESH:C537902","SCTID:237614004","MEDGEN:90978","OMIM:210740","UMLS:C0342284"],"synonyms":[{"name":"Bangstad syndrome","type":"exact"},{"name":"Bird-headed dwarfism with progressive ataxia, insulin-resistant diabetes, goiter and primary gonadal insufficiency","type":"related"},{"name":"Bird-headed dwarfism with progressive ataxia, insulin-resistant diabetes, goiter, and primary gonadal insufficiency","type":"related"},{"name":"Bird-headed dwarfism with progressive ataxia, insulin-resistant diabetes, goitre and primary gonadal insufficiency","type":"related"},{"name":"ataxia-diabetes-goiter-gonadal insufficiency syndrome","type":"exact"}],"termid":"MONDO:0008874","xrefs":{"Monarch":{"xref_id":"0008874"}}}


id: PBO:0000000
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene characterisation status","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"published","termid":"PBO:0000000"}


id: GO:0042582
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Primary lysosomal granule readily stainable with a Romanowsky stain.","definition_xrefs":["PMID:28717070","GOC:jl","PMID:17152095","PMID:5914694","WIKIPEDIA:Azurophilic_granule"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary lysosome","termid":"GO:0005766"},{"relation_name":"is_a","term_name":"secretory granule","termid":"GO:0030141"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005773"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005773","GO:0005575","GO:0005737","GO:0031410"],"is_obsolete":false,"name":"azurophil granule","synonyms":[{"name":"primary granule","type":"exact"}],"termid":"GO:0042582"}


id: GO:0000432
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involving glucose that activates or increases the rate of transcription from an RNA polymerase II promoter.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transcription from RNA polymerase II promoter by glucose","termid":"GO:0000430"},{"relation_name":"is_a","term_name":"carbon catabolite activation of transcription from RNA polymerase II promoter","termid":"GO:0000436"},{"relation_name":"is_a","term_name":"positive regulation of transcription by glucose","termid":"GO:0046016"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0006355"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0006351","GO:0006355"],"is_obsolete":false,"name":"positive regulation of transcription from RNA polymerase II promoter by glucose","synonyms":[{"name":"activation of transcription from RNA polymerase II promoter by glucose","type":"narrow"},{"name":"stimulation of transcription from RNA polymerase II promoter by glucose","type":"narrow"},{"name":"up regulation of transcription from RNA polymerase II promoter by glucose","type":"exact"},{"name":"up-regulation of transcription from RNA polymerase II promoter by glucose","type":"exact"},{"name":"upregulation of transcription from RNA polymerase II promoter by glucose","type":"exact"}],"termid":"GO:0000432"}


id: PBO:0048932
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GOLPH3 divergent transcript","termid":"PBO:0048932"}


id: GO:1900748
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of vascular endothelial growth factor signaling pathway.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of signal transduction","termid":"GO:0009967"},{"relation_name":"is_a","term_name":"regulation of vascular endothelial growth factor signaling pathway","termid":"GO:1900746"},{"relation_name":"positively_regulates","term_name":"vascular endothelial growth factor signaling pathway","termid":"GO:0038084"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of vascular endothelial growth factor signaling pathway","synonyms":[{"name":"activation of VEGF signaling","type":"exact"},{"name":"activation of VEGF-activated signaling pathway","type":"exact"},{"name":"activation of vascular endothelial growth factor signaling pathway","type":"narrow"},{"name":"activation of vascular endothelial growth factor signalling pathway","type":"exact"},{"name":"positive regulation of VEGF signaling","type":"exact"},{"name":"positive regulation of VEGF-activated signaling pathway","type":"exact"},{"name":"positive regulation of vascular endothelial growth factor signalling pathway","type":"exact"},{"name":"up regulation of VEGF signaling","type":"exact"},{"name":"up regulation of VEGF-activated signaling pathway","type":"exact"},{"name":"up regulation of vascular endothelial growth factor signaling pathway","type":"exact"},{"name":"up regulation of vascular endothelial growth factor signalling pathway","type":"exact"},{"name":"up-regulation of VEGF signaling","type":"exact"},{"name":"up-regulation of VEGF-activated signaling pathway","type":"exact"},{"name":"up-regulation of vascular endothelial growth factor signaling pathway","type":"exact"},{"name":"up-regulation of vascular endothelial growth factor signalling pathway","type":"exact"},{"name":"upregulation of VEGF signaling","type":"exact"},{"name":"upregulation of VEGF-activated signaling pathway","type":"exact"},{"name":"upregulation of vascular endothelial growth factor signaling pathway","type":"exact"},{"name":"upregulation of vascular endothelial growth factor signalling pathway","type":"exact"}],"termid":"GO:1900748"}


id: MONDO:0032932
data:
  {"annotated_genes":["SJAG_00522"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85868],"is_not":false,"summary":null,"term":"MONDO:0032932"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial DNA depletion syndrome","termid":"MONDO:0018158"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00522":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004069"],"is_obsolete":false,"name":"mitochondrial DNA depletion syndrome 18","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0070449","MEDGEN:1713890","UMLS:C5394140","OMIM:618811"],"synonyms":[{"name":"MITOCHONDRIAL DNA DEPLETION SYNDROME 18","type":"related"},{"name":"MTDPS18","type":"related"}],"termid":"MONDO:0032932","terms_by_termid":{"MONDO:0032932":null},"xrefs":{"Monarch":{"xref_id":"0032932"}}}


id: GO:0034802
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: branched-chain dodecylbenzene sulfonate + 1/2 O2 + H+ = sulfurous acid + branched-chain dodecyl-4-hydroxy-benzene + sulfite.","definition_xrefs":["UM-BBD_reactionID:r1079"],"gene_count":0,"genotype_count":0,"name":"obsolete branched-chain dodecylbenzene sulfonate monooxygenase activity (obsolete GO:0034802)","termid":"GO:0034802"}


id: GO:0075521
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a virus, or part of a virus, towards the host cell nucleus using host microtubules.","definition_xrefs":["UniProtKB-KW:KW-1177","VZ:983"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule-dependent intracellular transport of viral material","termid":"GO:0075519"},{"relation_name":"is_a","term_name":"transport of viral material towards nucleus","termid":"GO:0075606"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"microtubule-dependent intracellular transport of viral material towards nucleus","synonyms":[{"name":"microtubule-dependent intracellular transport of viral material to nucleus","type":"exact"}],"termid":"GO:0075521"}


id: GO:0017130
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a sequence of cytosine residues in an RNA molecule.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"poly-pyrimidine tract binding","termid":"GO:0008187"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003723"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0003723"],"is_obsolete":false,"name":"poly(C) RNA binding","synonyms":[{"name":"poly(C) binding","type":"broad"},{"name":"poly(rC) binding","type":"exact"}],"termid":"GO:0017130"}


id: GO:0042734
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A specialized area of membrane of the axon terminal that faces the plasma membrane of the neuron or muscle fiber with which the axon terminal establishes a synaptic junction; many synaptic junctions exhibit structural presynaptic characteristics, such as conical, electron-dense internal protrusions, that distinguish it from the remainder of the axon plasma membrane.","definition_xrefs":["GOC:jl","ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"synaptic membrane","termid":"GO:0097060"},{"relation_name":"part_of","term_name":"presynapse","termid":"GO:0098793"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005886","GO:0005575"],"is_obsolete":false,"name":"presynaptic membrane","synonyms":[{"name":"pre-synaptic membrane","type":"exact"},{"name":"presynaptic plasma membrane","type":"exact"}],"termid":"GO:0042734"}


id: PBO:0053802
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1058","termid":"PBO:0053802"}


id: PBO:0004636
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alkB homolog/2-OG-Fe(II) oxygenase family (predicted)","termid":"PBO:0004636"}


id: FYPO:0006203
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of dATP measured in the cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cellular dNTP level","termid":"FYPO:0006401"},{"relation_name":"is_a","term_name":"decreased cellular pentose phosphate level","termid":"FYPO:0006705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased cellular dATP level","synonyms":[{"name":"decreased cellular dATP level during mitotic cell cycle","type":"related"},{"name":"decreased cellular dATP level during vegetative growth","type":"exact"},{"name":"reduced cellular dATP level","type":"exact"}],"termid":"FYPO:0006203"}


id: GO:1990463
data:
  {"annotated_genes":["SJAG_00596","SJAG_04947"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[100454,104892],"is_not":false,"summary":null,"term":"GO:1990463"}]},"cv_name":"cellular_component","definition":"A protein complex that is anchored at the cortical face of the plasma membrane, and contains proteins involved in regulating cell cycle progression. In Schizosaccharomyces pombe, lateral cortical nodes are several megadaltons in size, and contain Slf1, which anchors the complex at the membrane, and the methyltransferase Skb1 in stoichiometric quantities, and may contain other proteins.","definition_xrefs":["PMID:25009287","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"lateral cell cortex","termid":"GO:0097575"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00596":null,"SJAG_04947":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005938"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005737","GO:0005938"],"is_obsolete":false,"name":"lateral cortical node","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"Skb1-containing cortical node","type":"exact"}],"termid":"GO:1990463","terms_by_termid":{"GO:1990463":null}}


id: GO:0043233
data:
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id: GO:0004044
data:
  {"annotated_genes":["SJAG_01661"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72832],"is_not":false,"summary":null,"term":"GO:0004044"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-phospho-beta-D-ribosylamine + L-glutamate + diphosphate = 5-phospho-alpha-D-ribose 1-diphosphate + L-glutamine + H2O.","definition_xrefs":["EC:2.4.2.14","RHEA:14905"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentosyltransferase activity","termid":"GO:0016763"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01661":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016757","GO:0003674"],"is_obsolete":false,"name":"amidophosphoribosyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:PRPPAMIDOTRANS-RXN","Reactome:R-HSA-73815","KEGG_REACTION:R01072"],"synonyms":[{"name":"5'-phosphoribosylpyrophosphate amidotransferase activity","type":"related"},{"name":"5-phosphoribosyl-1-pyrophosphate amidotransferase activity","type":"related"},{"name":"5-phosphoribosylamine:diphosphate phospho-alpha-D-ribosyltransferase (glutamate-amidating)","type":"related"},{"name":"5-phosphororibosyl-1-pyrophosphate amidotransferase activity","type":"related"},{"name":"alpha-5-phosphoribosyl-1-pyrophosphate amidotransferase activity","type":"related"},{"name":"glutamine 5-phosphoribosylpyrophosphate amidotransferase activity","type":"related"},{"name":"glutamine phosphoribosyldiphosphate amidotransferase activity","type":"related"},{"name":"glutamine phosphoribosylpyrophosphate amidotransferase activity","type":"related"},{"name":"glutamine ribosylpyrophosphate 5-phosphate amidotransferase activity","type":"related"},{"name":"phosphoribose pyrophosphate amidotransferase activity","type":"related"},{"name":"phosphoribosyl pyrophosphate amidotransferase activity","type":"related"},{"name":"phosphoribosyldiphosphate 5-amidotransferase activity","type":"related"},{"name":"phosphoribosylpyrophosphate glutamyl amidotransferase activity","type":"related"}],"termid":"GO:0004044","terms_by_termid":{"GO:0004044":null}}


id: GO:0002659
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of peripheral tolerance induction.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of tolerance induction dependent upon immune response","termid":"GO:0002653"},{"relation_name":"is_a","term_name":"regulation of peripheral tolerance induction","termid":"GO:0002658"},{"relation_name":"negatively_regulates","term_name":"peripheral tolerance induction","termid":"GO:0002465"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of peripheral tolerance induction","synonyms":[{"name":"down regulation of peripheral tolerance induction","type":"exact"},{"name":"down-regulation of peripheral tolerance induction","type":"exact"},{"name":"downregulation of peripheral tolerance induction","type":"exact"},{"name":"inhibition of peripheral tolerance induction","type":"narrow"}],"termid":"GO:0002659"}


id: MONDO:0001153
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A marked difference between the individual's expressed/experienced gender and the gender others would assign him or her, and it must continue for at least six months. (from DSM-5)","definition_xrefs":["MESH:D000068116"],"gene_count":0,"genotype_count":0,"name":"obsolete gender dysphoria (obsolete MONDO:0001153)","secondary_identifiers":["DOID:10919","SCTID:93461009","ICD9:302.50","Orphanet:459690"],"synonyms":[{"name":"transsexualism","type":"related"}],"termid":"MONDO:0001153","xrefs":{"Monarch":{"xref_id":"0001153"}}}


id: PBO:0002436
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-azetidine-2-carboxylic acid acetyltransferase","termid":"PBO:0002436"}


id: SO:1001280
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The recoding stimulatory signal located upstream of the recoding site.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"recoding_stimulatory_region","termid":"SO:1001268"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"five_prime_recoding_site","synonyms":[{"name":"five prime recoding site","type":"exact"}],"termid":"SO:1001280"}


id: PBO:0041606
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CA15 pseudogene 3","termid":"PBO:0041606"}


id: MONDO:0019804
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenital tracheomalacia is a rare condition where the trachea is soft and flexible causing the tracheal wall to collapse when exhaling, coughing or crying, that usually presents in infancy, and that is characterized by stridor and noisy breathing or upper respiratory infections. Tracheomalacia improves by the age of 18-24 months.","definition_xrefs":["Orphanet:95430"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tracheal disorder","termid":"MONDO:0002567"},{"relation_name":"is_a","term_name":"otorhinolaryngologic disease","termid":"MONDO:0024623"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital tracheomalacia","secondary_identifiers":["icd11.foundation:1616705280","MESH:D055090","NANDO:2200195","DOID:0060313","HP:0002779","SCTID:95467005","MEDGEN:140261","MedDRA:10010654","NCIT:C98634","GARD:10515","ICD9:748.3","icd11.foundation:303133490","NORD:2028","UMLS:C0392109"],"synonyms":[{"name":"Congenital Tracheomalacia","type":"exact"},{"name":"congenital major airway collapse","type":"exact"},{"name":"congenital tracheomalacia","type":"exact"},{"name":"tracheomalacia","type":"related"},{"name":"tracheomalacia, congenital","type":"exact"},{"name":"type 1 tracheomalacia","type":"related"}],"termid":"MONDO:0019804","xrefs":{"Monarch":{"xref_id":"0019804"}}}


id: GO:1904528
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of microtubule binding.","definition_xrefs":["GOC:TermGenie","GO_REF:0000059","GOC:als","PMID:24520051"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of microtubule binding (obsolete GO:1904528)","synonyms":[{"name":"activation of microtubule binding","type":"narrow"},{"name":"activation of microtubule severing activity","type":"related"},{"name":"activation of microtubule/chromatin interaction","type":"related"},{"name":"positive regulation of microtubule severing activity","type":"related"},{"name":"positive regulation of microtubule/chromatin interaction","type":"related"},{"name":"up regulation of microtubule binding","type":"exact"},{"name":"up regulation of microtubule severing activity","type":"related"},{"name":"up regulation of microtubule/chromatin interaction","type":"related"},{"name":"up-regulation of microtubule binding","type":"exact"},{"name":"up-regulation of microtubule severing activity","type":"related"},{"name":"up-regulation of microtubule/chromatin interaction","type":"related"},{"name":"upregulation of microtubule binding","type":"exact"},{"name":"upregulation of microtubule severing activity","type":"related"},{"name":"upregulation of microtubule/chromatin interaction","type":"related"}],"termid":"GO:1904528"}


id: MONDO:0018475
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary dementia","termid":"MONDO:0015547"},{"relation_name":"is_a","term_name":"inherited neurodegenerative disorder","termid":"MONDO:0024237"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0002039"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0002039"],"is_obsolete":false,"name":"PRKAR1B-related neurodegenerative dementia with intermediate filaments","secondary_identifiers":["GARD:21738","Orphanet:412066","MEDGEN:1654800","UMLS:C4751505"],"termid":"MONDO:0018475","xrefs":{"Monarch":{"xref_id":"0018475"}}}


id: PBO:0066835
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 134","termid":"PBO:0066835"}


id: GO:0042063
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that results in the generation of glial cells. This includes the production of glial progenitors and their differentiation into mature glia.","definition_xrefs":["GOC:dgh","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neurogenesis","termid":"GO:0022008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"gliogenesis","synonyms":[{"name":"glial cell generation","type":"exact"}],"termid":"GO:0042063"}


id: GO:0036126
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A microtubule-based flagellum (or cilium) that is part of a sperm, a mature male germ cell that develops from a spermatid.","definition_xrefs":["GOC:sart","GOC:cilia","PMID:8441407"],"direct_ancestors":[{"relation_name":"is_a","term_name":"9+2 motile cilium","termid":"GO:0097729"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"sperm flagellum","synonyms":[{"name":"sperm cilium","type":"exact"},{"name":"sperm tail","type":"exact"}],"termid":"GO:0036126"}


id: MONDO:0004421
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A breast papilloma characterized by the presence of predominant sclerosing architectural features.","definition_xrefs":["NCIT:C27944"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intraductal breast papilloma","termid":"MONDO:0021097"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sclerosing breast papilloma","secondary_identifiers":["DOID:7984","MEDGEN:233436","UMLS:C1335932"],"synonyms":[{"name":"Complex sclerosing papillary lesion","type":"exact"},{"name":"Complex sclerosing papillary lesion of the breast","type":"exact"},{"name":"sclerosing breast papilloma","type":"exact"}],"termid":"MONDO:0004421","xrefs":{"Monarch":{"xref_id":"0004421"}}}


id: GO:0042287
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a major histocompatibility complex molecule; a set of molecules displayed on cell surfaces that are responsible for lymphocyte recognition and antigen presentation.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor binding","termid":"GO:0005102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"MHC protein binding","synonyms":[{"name":"major histocompatibility complex binding","type":"exact"},{"name":"major histocompatibility complex ligand","type":"narrow"}],"termid":"GO:0042287"}


id: PBO:0047455
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FCH and double SH3 domains 2","termid":"PBO:0047455"}


id: PBO:0086690
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; induced by cell wall perturbation","termid":"PBO:0086690"}


id: RO:0002518
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"x has end sequence y if the end of x is identical to the end of y, and x has y as a subsequence","direct_ancestors":[{"relation_name":"is_a","term_name":"has_subsequence","termid":"RO:0002524"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_end_sequence","termid":"RO:0002518"}


id: PBO:0086556
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; conserved among S. cerevisiae strains; YHL005C is not an essential gene","termid":"PBO:0086556"}


id: MONDO:0700162
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A granular cell tumor occurring in a dog.","definition_xrefs":["NCIT:C158784"],"direct_ancestors":[{"relation_name":"is_a","term_name":"canine glioma","termid":"MONDO:0700151"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"canine granular cell tumor","termid":"MONDO:0700162","xrefs":{"Monarch":{"xref_id":"0700162"}}}


id: GO:0106294
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: NADPH + H+ + O2 = NADP + hydrogen peroxide (H2O2).","definition_xrefs":["GOC:rynl"],"gene_count":0,"genotype_count":0,"name":"obsolete NADPH oxidase H202-forming activity (obsolete GO:0106294)","termid":"GO:0106294"}


id: PBO:0065748
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyrroline-5-carboxylate reductase 3","termid":"PBO:0065748"}


id: PBO:0052774
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 18 pseudogene 66","termid":"PBO:0052774"}


id: PBO:0058595
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6727","termid":"PBO:0058595"}


id: PBO:0058511
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5701-1","termid":"PBO:0058511"}


id: PBO:0052088
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kelch repeat and BTB domain containing 4","termid":"PBO:0052088"}


id: PBO:0044926
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diacylglycerol kinase delta","termid":"PBO:0044926"}


id: MONDO:0030684
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hypogonadotropic hypogonadism","termid":"MONDO:0018555"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypogonadotropic hypogonadism 27 without anosmia","secondary_identifiers":["OMIM:619755","UMLS:C5676921","MEDGEN:1810165"],"synonyms":[{"name":"HH27","type":"exact"},{"name":"hypogonadotropic hypogonadism 27 without anosmia","type":"exact"}],"termid":"MONDO:0030684","xrefs":{"Monarch":{"xref_id":"0030684"}}}


id: FYPO:0006348
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing mechlorethamine.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002057"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0002058","FYPO:0000003","FYPO:0000139","FYPO:0000257","FYPO:0002060"],"is_obsolete":false,"name":"normal growth on mechlorethamine","synonyms":[{"name":"normal cell population growth in presence of mechlorethamine","type":"exact"},{"name":"normal cell population growth on mechlorethamine","type":"exact"},{"name":"normal growth on 2-chloro-N-(2-chloroethyl)-N-methylethanamine","type":"exact"},{"name":"normal growth on HN2","type":"exact"},{"name":"normal growth on bis(2-chloroethyl)methylamine","type":"exact"},{"name":"normal vegetative cell population growth on mechlorethamine","type":"exact"}],"termid":"FYPO:0006348"}


id: PBO:0077351
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 91","termid":"PBO:0077351"}


id: GO:0044817
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The production of hydrogen which results from the dissociation by light of water into molecular hydrogen and oxygen. This process is observed in cyanobacteria and microalgae.","definition_xrefs":["GOC:mengo_curators","PMID:20692761","PMID:20395274"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrogen biosynthetic process","termid":"GO:1902422"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hydrogen generation via biophotolysis","synonyms":[{"name":"hydrogen biosynthesis via biophotolysis","type":"exact"}],"termid":"GO:0044817"}


id: PBO:0108692
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ArfGEF Sec72","termid":"PBO:0108692"}


id: PBO:0066705
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 2","termid":"PBO:0066705"}


id: PBO:0067359
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 457, pseudogene","termid":"PBO:0067359"}


id: PBO:0048901
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgin A6 family like 25","termid":"PBO:0048901"}


id: PBO:0071699
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPL38 pseudogene 5","termid":"PBO:0071699"}


id: PBO:0088924
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Prp19 complex subunit Cwf12","termid":"PBO:0088924"}


id: PBO:0001686
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally regulated by Deb1","termid":"PBO:0001686"}


id: PBO:0034346
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_soma_location","termid":"PBO:0034346"}


id: PR:Q10149
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- grh1 gene.","definition_xrefs":["UniProtKB:Q10149","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1D4.02c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1D4.02c","synonyms":[{"name":"Spom972h-grh1","type":"exact"}],"termid":"PR:Q10149"}


id: MONDO:0016362
data:
  {"annotated_genes":["SJAG_03724","SJAG_01419","SJAG_02261"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86135],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012041"},{"annotations":[85604],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014630"},{"annotations":[87491],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0044300"}]},"cv_name":"mondo","definition":"Attenuated familial adenomatous polyposis (AFAP) is a mild form of familial adenomatous polyposis characterized by the presence of fewer than 100 adenomatous colonic polyps, a more proximal colonic location, a delayed age of colorectal cancer (CRC) onset and a more limited expression of the extracolonic features.","definition_xrefs":["Orphanet:220460"],"direct_ancestors":[{"relation_name":"is_a","term_name":"classic or attenuated familial adenomatous polyposis","termid":"MONDO:0021057"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01419":null,"SJAG_02261":null,"SJAG_03724":null},"genotype_count":0,"is_obsolete":false,"name":"attenuated familial adenomatous polyposis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:715866009","UMLS:C2674616","NCIT:C6729","MEDGEN:436213","MESH:C538265","icd11.foundation:1023083906","GARD:8532"],"synonyms":[{"name":"AAPC","type":"exact"},{"name":"AFAP","type":"exact"},{"name":"HFAS","type":"exact"},{"name":"attenuated FAP","type":"exact"},{"name":"attenuated adenomatous polyposis coli","type":"exact"},{"name":"attenuated familial adenomatous polyposis","type":"exact"},{"name":"attenuated familial polyposis coli","type":"exact"},{"name":"hereditary flat adenoma syndrome","type":"exact"},{"name":"mild form of FAP","type":"related"}],"termid":"MONDO:0016362","terms_by_termid":{"MONDO:0012041":null,"MONDO:0014630":null,"MONDO:0044300":null},"xrefs":{"Monarch":{"xref_id":"0016362"}}}


id: PBO:0047106
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 156 member A","termid":"PBO:0047106"}


id: PR:Q9P7Y9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sin1 gene.","definition_xrefs":["UniProtKB:Q9P7Y9","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stress-activated map kinase-interacting protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPYUG7.02c","synonyms":[{"name":"SAPK-interacting protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-sin1","type":"exact"}],"termid":"PR:Q9P7Y9"}


id: GO:0016272
data:
  {"annotated_genes":["SJAG_04012","SJAG_05191","SJAG_03463","SJAG_00505","SJAG_00524","SJAG_01545"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[58338,61813,70201,71171,76468,78895],"is_not":false,"summary":null,"term":"GO:0016272"}]},"cv_name":"cellular_component","definition":"A multisubunit chaperone that is capable of delivering unfolded proteins to cytosolic chaperonin, which it acts as a cofactor for. In humans, the complex is a heterohexamer of two PFD-alpha and four PFD-beta type subunits. In Saccharomyces cerevisiae, it also acts in the nucleus to regulate the rate of elongation by RNA polymerase II via a direct effect on histone dynamics.","definition_xrefs":["GOC:jl","PMID:9630229","PMID:17384227","PMID:24068951"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00505":null,"SJAG_00524":null,"SJAG_01545":null,"SJAG_03463":null,"SJAG_04012":null,"SJAG_05191":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"prefoldin complex","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null},"secondary_identifiers":["Wikipedia:Prefoldin"],"synonyms":[{"name":"GIM complex","type":"narrow"}],"termid":"GO:0016272","terms_by_termid":{"GO:0016272":null}}


id: PBO:0072924
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small Cajal body-specific RNA 5","termid":"PBO:0072924"}


id: MONDO:0010649
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Isolated congenital megalocornea is a genetic, non-syndromic developmental defect of the anterior eye segment characterized by bilateral enlargement of the corneal diameter (>12.5 mm) and a deep anterior eye chamber, without an elevation in intraocular pressure. It can manifest with mild to moderate myopia as well as photophobia and iridodonesis (due to iris hypoplasia). Associated complications include lens dislocation, retinal detachment, presenile cataract development, and secondary glaucoma.","definition_xrefs":["Orphanet:91489"],"direct_ancestors":[{"relation_name":"is_a","term_name":"megalocornea","termid":"MONDO:0009576"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"isolated congenital megalocornea","secondary_identifiers":["SCTID:734026006","GARD:12648","OMIM:309300","MEDGEN:1385311","UMLS:C4518341"],"synonyms":[{"name":"MGC1","type":"related"},{"name":"Mgcn","type":"related"},{"name":"congenital anterior megalophthalmia","type":"exact"},{"name":"isolated congenital megalocornea","type":"exact"},{"name":"megalocornea","type":"related"},{"name":"megalocornea 1, X-linked, X-linked recessive","type":"exact"}],"termid":"MONDO:0010649","xrefs":{"Monarch":{"xref_id":"0010649"}}}


id: PBO:0029419
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_palmitoylation_during_vegetative_growth","termid":"PBO:0029419"}


id: GO:0062187
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-(5Z,8Z,11Z,14Z-eicosatetraenoyl)-ethanolamine + O2 + reduced [NADPH--hemoprotein reductase] = H+ + H2O + N-(8,9-epoxy-5Z,11Z,14Z-eicosatrienoyl)-ethanolamine + oxidized [NADPH--hemoprotein reductase].","definition_xrefs":["PMID:21289075","RHEA:53140"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anandamide epoxidase activity","termid":"GO:0062186"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"anandamide 8,9 epoxidase activity","termid":"GO:0062187"}


id: PBO:0044238
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cullin 7","termid":"PBO:0044238"}


id: FYPO:0002877
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which transcription does not occur. All genes, or a specific subset of genes, may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased transcription","termid":"FYPO:0002876"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0006551","FYPO:0005447","FYPO:0000294"],"is_obsolete":false,"name":"abolished transcription","synonyms":[{"name":"transcription abolished","type":"exact"}],"termid":"FYPO:0002877"}


id: GO:0019469
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of octopine (N-(1-carboxy-4-guanidinobutyl)-L-alanine), an amino acid derived opine.","definition_xrefs":["ISBN:0198506732","GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete octopine catabolic process (obsolete GO:0019469)","synonyms":[{"name":"octopine breakdown","type":"exact"},{"name":"octopine catabolism","type":"exact"},{"name":"octopine degradation","type":"exact"}],"termid":"GO:0019469"}


id: PBO:0061213
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NOL4L divergent transcript","termid":"PBO:0061213"}


id: PBO:0082638
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of glutamine amidotransferase (GATase II); forms a complex with Dug2p to degrade glutathione (GSH) and other peptides containing a gamma-glu-X bond in an alternative pathway to GSH degradation by gamma-glutamyl transpeptidase (Ecm38p)","termid":"PBO:0082638"}


id: PBO:0014616
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lunapark homolog Lnp1","termid":"PBO:0014616"}


id: PBO:0085198
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Outer kinetochore protein and component of the Ctf19 complex; involved in the establishment of pericentromeric cohesion during mitosis; prevents non-disjunction of sister chromatids during meiosis II; forms a stable complex with Chl4p; required for localization of Sgo1p to pericentric sites during meiosis I; orthologous to human centromere constitutive-associated network (CCAN) subunit CENP-L and fission yeast fta1","termid":"PBO:0085198"}


id: GO:0070667
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the rate or extent of mast cell proliferation.","definition_xrefs":["GOC:add","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of leukocyte proliferation","termid":"GO:0070664"},{"relation_name":"is_a","term_name":"regulation of mast cell proliferation","termid":"GO:0070666"},{"relation_name":"negatively_regulates","term_name":"mast cell proliferation","termid":"GO:0070662"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of mast cell proliferation","synonyms":[{"name":"down regulation of mast cell proliferation","type":"exact"},{"name":"down-regulation of mast cell proliferation","type":"exact"},{"name":"downregulation of mast cell proliferation","type":"exact"},{"name":"inhibition of mast cell proliferation","type":"narrow"}],"termid":"GO:0070667"}


id: GO:1903018
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of glycoprotein metabolic process.","definition_xrefs":["GOC:BHF","PMID:23544079","GOC:TermGenie","GOC:rl","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein metabolic process","termid":"GO:0051246"},{"relation_name":"regulates","term_name":"glycoprotein metabolic process","termid":"GO:0009100"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of glycoprotein metabolic process","synonyms":[{"name":"regulation of glycoprotein metabolism","type":"exact"}],"termid":"GO:1903018"}


id: PBO:0016588
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. cerevisiae SIT4","termid":"PBO:0016588"}


id: PBO:0090247
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II CTD phosphatase Ssu72","termid":"PBO:0090247"}


id: GO:0002910
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of peripheral B cell deletion.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of peripheral tolerance induction","termid":"GO:0002660"},{"relation_name":"is_a","term_name":"positive regulation of B cell mediated immunity","termid":"GO:0002714"},{"relation_name":"is_a","term_name":"positive regulation of B cell deletion","termid":"GO:0002869"},{"relation_name":"is_a","term_name":"regulation of peripheral B cell deletion","termid":"GO:0002908"},{"relation_name":"positively_regulates","term_name":"peripheral B cell deletion","termid":"GO:0002454"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of peripheral B cell deletion","synonyms":[{"name":"activation of peripheral B cell deletion","type":"narrow"},{"name":"stimulation of peripheral B cell deletion","type":"narrow"},{"name":"up regulation of peripheral B cell deletion","type":"exact"},{"name":"up-regulation of peripheral B cell deletion","type":"exact"},{"name":"upregulation of peripheral B cell deletion","type":"exact"}],"termid":"GO:0002910"}


id: PBO:0044099
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cancer/testis antigen family 47 member A7","termid":"PBO:0044099"}


id: PBO:0004748
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3'-5' exoribonuclease subunit Dis3 (predicted)","termid":"PBO:0004748"}


id: PBO:0051591
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IL20RB antisense RNA 1","termid":"PBO:0051591"}


id: PBO:0062534
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 9 subfamily A member 3 pseudogene","termid":"PBO:0062534"}


id: PR:Q9USL4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- nup61 gene.","definition_xrefs":["UniProtKB:Q9USL4","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin nup61 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC18B5.07c","synonyms":[{"name":"Spom972h-nup61","type":"exact"},{"name":"nuclear pore protein nup61 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9USL4"}


id: PBO:0063636
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PFN2 antisense RNA 1","termid":"PBO:0063636"}


id: PBO:0004485
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.5.1.10","termid":"PBO:0004485"}


id: PBO:0045174
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNAJA2 divergent transcript","termid":"PBO:0045174"}


id: GO:0062136
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A plasma membrane protein complex capable of low-density lipoprotein particle receptor activity. It may also bind xenobiotic toxins and deliver them into the cell via endocytosis. While most substrates get degraded via the endosome the receptor is recycled to the plasma membrane. It may also act as a transducer of intracellular signal pathways and often acts in corporation with other cell-surface receptors.","definition_xrefs":["PMID:26005850","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cargo receptor complex","termid":"GO:0062137"},{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005886"],"is_obsolete":false,"name":"low-density lipoprotein receptor complex","synonyms":[{"name":"LDL receptor complex","type":"exact"},{"name":"LDLR complex","type":"exact"},{"name":"low-density lipoprotein particle receptor complex","type":"exact"}],"termid":"GO:0062136"}


id: GO:0033029
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of neutrophil apoptotic process.","definition_xrefs":["GOC:mtg_apoptosis","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of immune system process","termid":"GO:0002682"},{"relation_name":"is_a","term_name":"regulation of myeloid cell apoptotic process","termid":"GO:0033032"},{"relation_name":"is_a","term_name":"regulation of leukocyte apoptotic process","termid":"GO:2000106"},{"relation_name":"regulates","term_name":"neutrophil apoptotic process","termid":"GO:0001781"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of neutrophil apoptotic process","synonyms":[{"name":"regulation of neutrophil apoptosis","type":"narrow"}],"termid":"GO:0033029"}


id: PR:O60096
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- bot1 gene.","definition_xrefs":["UniProtKB:O60096","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"37S ribosomal protein S35, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC14C8.16c","synonyms":[{"name":"Spom972h-bot1","type":"exact"}],"termid":"PR:O60096"}


id: MONDO:0016005
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Indomethacin embryofetopathy refers to the manifestations that may be observed in a fetus or newborn when the mother has taken indomethacin, a potent prostaglandin inhibitor and tocolytic agent that can cross placenta, during pregnancy. Reported adverse fetal/neonatal effects include decreased renal function resulting in oligohydramnios, closure of the ductus arteriosus, and delayed cardiovascular adaptation at birth. These effects are usually transient and reversible. Indomethacin may also be a risk factor for cerebral injury (periventricular leukomalacia) and necrotizing enterocolitisin preterm infants.","definition_xrefs":["Orphanet:1909"],"direct_ancestors":[{"relation_name":"is_a","term_name":"toxic or drug-related embryofetopathy","termid":"MONDO:0016677"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"indomethacin embryofetopathy","secondary_identifiers":["icd11.foundation:1929563114","MEDGEN:903069","UMLS:C4275138","SCTID:715430001"],"synonyms":[{"name":"antenatal indomethacin exposure","type":"related"},{"name":"fetal indomethacin syndrome","type":"exact"},{"name":"foetal indomethacin syndrome","type":"exact"}],"termid":"MONDO:0016005","xrefs":{"Monarch":{"xref_id":"0016005"}}}


id: PBO:0083366
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; overlaps the verified ORF DIC1/YLR348C","termid":"PBO:0083366"}


id: GO:0030673
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The portion of the plasma membrane surrounding an axon; it is a specialized trilaminar random mosaic of protein molecules floating within a fluid matrix of highly mobile phospholipid molecules, 7-8 nm in thickness.","definition_xrefs":["PMID:9527135"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron projection membrane","termid":"GO:0032589"},{"relation_name":"part_of","term_name":"main axon","termid":"GO:0044304"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005886"],"is_obsolete":false,"name":"axolemma","secondary_identifiers":["Wikipedia:Axolemma","NIF_Subcellular:sao250772229"],"synonyms":[{"name":"axonal membrane","type":"exact"}],"termid":"GO:0030673"}


id: MONDO:0010702
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare neurodevelopmental disorder in the ciliopathy group that is lethal in males and characterized by variable anomalies including external malformations (craniofacial and digital), and possible involvement of the central nervous system (CNS) and of viscera (kidneys, pancreas and ovaries) in females.","definition_xrefs":["Orphanet:2750"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"orofaciodigital syndrome","termid":"MONDO:0015375"},{"relation_name":"excluded_subClassOf","term_name":"ectodermal dysplasia syndrome","termid":"MONDO:0019287"},{"relation_name":"excluded_subClassOf","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"},{"relation_name":"excluded_subClassOf","term_name":"hereditary sebaceous gland anomaly","termid":"MONDO:0021029"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"ciliopathy","termid":"MONDO:0005308"},{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"orofaciodigital syndrome I","secondary_identifiers":["GARD:4121","NCIT:C75481","OMIM:311200","UMLS:C1510460","DOID:0060316","MESH:C537134","SCTID:1779005","MEDGEN:307142","SCTID:763833006"],"synonyms":[{"name":"OFD syndrome 1","type":"exact"},{"name":"OFD1","type":"exact"},{"name":"OFDI","type":"exact"},{"name":"OFDS 1","type":"exact"},{"name":"OFDSI","type":"exact"},{"name":"Papillon-Leage and Psaume syndrome","type":"exact"},{"name":"Papillon-Leage-Psaume syndrome","type":"exact"},{"name":"Papillon-Léage-Psaume syndrome","type":"exact"},{"name":"Papillon-league-Psaume syndrome (formerly)","type":"exact"},{"name":"oral facial digital syndrome 1","type":"exact"},{"name":"oral facial digital syndrome type 1","type":"exact"},{"name":"oral-facial-digital syndrome 1","type":"exact"},{"name":"oral-facial-digital syndrome type 1","type":"exact"},{"name":"oral-facial-digital syndrome, type 1","type":"exact"},{"name":"orofaciodigital syndrome 1","type":"exact"},{"name":"orofaciodigital syndrome I","type":"exact"},{"name":"orofaciodigital syndrome i, X-linked dominant","type":"exact"},{"name":"orofaciodigital syndrome type 1","type":"exact"},{"name":"orofaciodigital syndrome type I","type":"exact"}],"termid":"MONDO:0010702","xrefs":{"Monarch":{"xref_id":"0010702"}}}


id: GO:0035990
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires the specialized features of a tendon cell. Tendon cell are elongated fibrocytes in which the cytoplasm is stretched between the collagen fibres of the tendon. Tendon cells have a central cell nucleus with a prominent nucleolus, a well-developed rough endoplasmic reticulum, and are responsible for synthesis and turnover of tendon fibres and ground substance.","definition_xrefs":["CL:0000388","GOC:yaf","PMID:21412429"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"},{"relation_name":"part_of","term_name":"tendon formation","termid":"GO:0035992"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tendon cell differentiation","synonyms":[{"name":"muscle attachment cell differentiation","type":"exact"},{"name":"tenocyte differentiation","type":"related"}],"termid":"GO:0035990"}


id: PBO:0088804
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell wall and ascospore endo-1,3-beta-glucanase Eng2","termid":"PBO:0088804"}


id: GO:1901700
data:
  {"annotated_genes":["SJAG_03653","SJAG_00472","SJAG_02960","SJAG_04953","SJAG_04632","SJAG_02444","SJAG_05256","SJAG_00668","SJAG_02515","SJAG_01254","SJAG_06611","SJAG_03081","SJAG_01216","SJAG_04399","SJAG_01699","SJAG_04403","SJAG_02010","SJAG_00141","SJAG_01734","SJAG_03032","SJAG_01858","SJAG_04823","SJAG_03303","SJAG_04788","SJAG_01457","SJAG_05181","SJAG_04312","SJAG_04026","SJAG_00574","SJAG_01754","SJAG_01199"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[115914,116946,107219,102209,106868,106277,109390,109896,94591],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0010619"},{"annotations":[113117],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0110095"},{"annotations":[95561,105415,109213,100364,117751,118674],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0061692"},{"annotations":[105418],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0140041"},{"annotations":[77932],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071244"},{"annotations":[78518,95897],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0046294"},{"annotations":[99633,93501,61055,89765,74693,58106,89343,69281,65337],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0019430"},{"annotations":[96071,93912],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097466"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an oxygen-containing compound stimulus.","definition_xrefs":["GOC:TermGenie","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to chemical","termid":"GO:0042221"}],"gene_count":31,"genes_by_uniquename":{"SJAG_00141":null,"SJAG_00472":null,"SJAG_00574":null,"SJAG_00668":null,"SJAG_01199":null,"SJAG_01216":null,"SJAG_01254":null,"SJAG_01457":null,"SJAG_01699":null,"SJAG_01734":null,"SJAG_01754":null,"SJAG_01858":null,"SJAG_02010":null,"SJAG_02444":null,"SJAG_02515":null,"SJAG_02960":null,"SJAG_03032":null,"SJAG_03081":null,"SJAG_03303":null,"SJAG_03653":null,"SJAG_04026":null,"SJAG_04312":null,"SJAG_04399":null,"SJAG_04403":null,"SJAG_04632":null,"SJAG_04788":null,"SJAG_04823":null,"SJAG_04953":null,"SJAG_05181":null,"SJAG_05256":null,"SJAG_06611":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to oxygen-containing compound","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"response to oxygen molecular entity","type":"exact"}],"termid":"GO:1901700","terms_by_termid":{"GO:0010619":null,"GO:0019430":null,"GO:0046294":null,"GO:0061692":null,"GO:0071244":null,"GO:0097466":null,"GO:0110095":null,"GO:0140041":null}}


id: GO:1905337
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of aggrephagy.","definition_xrefs":["GO_REF:0000058","GOC:pad","PMID:25686248","GOC:TermGenie","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of macroautophagy","termid":"GO:0016239"},{"relation_name":"is_a","term_name":"regulation of aggrephagy","termid":"GO:1905335"},{"relation_name":"positively_regulates","term_name":"aggrephagy","termid":"GO:0035973"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006914"},{"rel_name":"positively_regulates","termid":"GO:0006914"}],"interesting_parent_ids":["GO:0006914","GO:0008150"],"is_obsolete":false,"name":"positive regulation of aggrephagy","synonyms":[{"name":"activation of aggrephagy","type":"narrow"},{"name":"up regulation of aggrephagy","type":"exact"},{"name":"up-regulation of aggrephagy","type":"exact"},{"name":"upregulation of aggrephagy","type":"exact"}],"termid":"GO:1905337"}


id: PBO:0028597
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_UDP-N-acetylglucosamine-dolichyl-phosphate_N-acetylglucosaminephosphotransferase_activity","termid":"PBO:0028597"}


id: PATO:0001953
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A pattern quality inhering in a bearer by virtue of the bearer's consisting of paired parts that alternately cross each other.","definition_xrefs":["ISBN:0881923214"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regular spatial pattern","termid":"PATO:0000440"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decussate","synonyms":[{"name":"crosscutting","type":"exact"},{"name":"intercrossing","type":"exact"},{"name":"intersecting","type":"exact"}],"termid":"PATO:0001953"}


id: PBO:0060096
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND5 pseudogene 43","termid":"PBO:0060096"}


id: SO:0000078
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A transcript that is polycistronic.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"polycistronic","termid":"SO:0000880"},{"relation_name":"is_a","term_name":"transcript","termid":"SO:0000673"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polycistronic_transcript","synonyms":[{"name":"polycistronic transcript","type":"exact"}],"termid":"SO:0000078"}


id: PBO:0113150
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GYF domain protein; involved in COPII vesicle formation; regulates Cdc48p function in transcription stress response; interacts with the Sec23p/Sec24p subcomplex; overexpression suppresses the temperature sensitivity of a myo2 mutant; homologous to human GIGYF1 and GIGYF2; similar to S. pombe Mpd2; SMY2 has a paralog, SYH1, that arose from the whole genome duplication","termid":"PBO:0113150"}


id: PBO:0041546
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 18 putative open reading frame 15","termid":"PBO:0041546"}


id: PBO:0087068
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal 60S subunit protein L33B; rpl33b null mutant exhibits normal growth while rpl33a rpl33b double null mutant is inviable; homologous to mammalian ribosomal protein L35A, no bacterial homolog; RPL33B has a paralog, RPL33A, that arose from the whole genome duplication","termid":"PBO:0087068"}


id: PBO:0046671
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"estrogen related receptor beta","termid":"PBO:0046671"}


id: PBO:0080700
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WNT5A antisense RNA 1","termid":"PBO:0080700"}


id: GO:0102489
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: GTP + 2 H2O = GMP + 2 hydrogenphosphate + 2 H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete GTP phosphohydrolase activity (obsolete GO:0102489)","termid":"GO:0102489"}


id: MONDO:0003910
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A melanoma arising from the choroid, ciliary body, or the iris. It is characterized by the presence of a mixture of spindle A melanoma cells, spindle B melanoma cells, and epithelioid melanoma cells.","definition_xrefs":["NCIT:C35781"],"direct_ancestors":[{"relation_name":"is_a","term_name":"uveal melanoma","termid":"MONDO:0006486"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005328"],"is_obsolete":false,"name":"mixed cell uveal melanoma","secondary_identifiers":["MEDGEN:235330","EFO:1000380","UMLS:C1334782","DOID:6522"],"synonyms":[{"name":"mixed cell uveal melanoma","type":"exact"}],"termid":"MONDO:0003910","xrefs":{"Monarch":{"xref_id":"0003910"}}}


id: PBO:0081873
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 815, pseudogene","termid":"PBO:0081873"}


id: PBO:0077631
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane O-mannosyltransferase targeting cadherins 3","termid":"PBO:0077631"}


id: GO:0072165
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the anterior mesonephric tubule over time, from its initial formation to the mature structure. The anterior mesonephric tubule is an epithelial tube that is part of the mesonephros.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesonephric tubule development","termid":"GO:0072164"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anterior mesonephric tubule development","termid":"GO:0072165"}


id: PBO:0074279
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"slit guidance ligand 1","termid":"PBO:0074279"}


id: MONDO:0800386
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A poisoning that is caused by exposure to organophosphate.","definition_xrefs":["MONDO:patterns/patterns/poisoning"],"direct_ancestors":[{"relation_name":"is_a","term_name":"poisoning","termid":"MONDO:0029000"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"organophosphate poisoning","synonyms":[{"name":"insecticide poisoning","type":"exact"},{"name":"organophosphate exposure","type":"exact"}],"termid":"MONDO:0800386","xrefs":{"Monarch":{"xref_id":"0800386"}}}


id: PBO:0013230
data:
  {"annotation_feature_type":"gene","cv_name":"feature_cvtermprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"curator_name","termid":"PBO:0013230"}


id: PBO:0045604
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox 4 like 15 (pseudogene)","termid":"PBO:0045604"}


id: PBO:0060797
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit S5 pseudogene 3","termid":"PBO:0060797"}


id: PBO:0077327
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 63C","termid":"PBO:0077327"}


id: GO:0036016
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an interleukin-3 stimulus.","definition_xrefs":["GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to interleukin-3","termid":"GO:0036015"},{"relation_name":"is_a","term_name":"cellular response to cytokine stimulus","termid":"GO:0071345"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to interleukin-3","synonyms":[{"name":"cellular response to IL-3","type":"exact"}],"termid":"GO:0036016"}


id: GO:1904384
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a sodium phosphate stimulus.","definition_xrefs":["PMID:24625659","GO_REF:0000071","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to salt","termid":"GO:1902075"},{"relation_name":"is_a","term_name":"response to sodium phosphate","termid":"GO:1904383"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to sodium phosphate","termid":"GO:1904384"}


id: MOD:01209
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-aspartic acid residue to the copper(1+) aspartate salt.","definition_xrefs":["Unimod:531#D"],"direct_ancestors":[{"relation_name":"is_a","term_name":"copper containing modified residue","termid":"MOD:00742"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-aspartic acid residue","termid":"MOD:02066"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"copper(1+) L-aspartate","synonyms":[{"name":"Cation:Cu[I]","type":"related"},{"name":"Replacement of proton by copper","type":"related"},{"name":"cuprous salt","type":"exact"}],"termid":"MOD:01209"}


id: GO:0036035
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a osteoclast from its formation to the mature structure. Cell development does not include the steps involved in committing a cell to a specific fate. An osteoclast is a specialized phagocytic cell associated with the absorption and removal of the mineralized matrix of bone tissue.","definition_xrefs":["GOC:bf","CL:0000092","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myeloid cell development","termid":"GO:0061515"},{"relation_name":"is_a","term_name":"bone cell development","termid":"GO:0098751"},{"relation_name":"part_of","term_name":"osteoclast differentiation","termid":"GO:0030316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"osteoclast development","synonyms":[{"name":"osteoclast cell development","type":"exact"}],"termid":"GO:0036035"}


id: GO:1900956
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of 17-methylnonadec-1-ene biosynthetic process.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of olefin biosynthetic process","termid":"GO:1900911"},{"relation_name":"is_a","term_name":"regulation of 17-methylnonadec-1-ene metabolic process","termid":"GO:1900959"},{"relation_name":"regulates","term_name":"17-methylnonadec-1-ene biosynthetic process","termid":"GO:1900883"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of 17-methylnonadec-1-ene biosynthetic process","synonyms":[{"name":"regulation of 17-methylnonadec-1-ene anabolism","type":"exact"},{"name":"regulation of 17-methylnonadec-1-ene biosynthesis","type":"exact"},{"name":"regulation of 17-methylnonadec-1-ene formation","type":"exact"},{"name":"regulation of 17-methylnonadec-1-ene synthesis","type":"exact"}],"termid":"GO:1900956"}


id: GO:0071770
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components, including (phenyl)phthiocerol, phthiodiolone, phthiotriol dimycocerosate and diphthioceranate, to form the DIM/DIP layer of the Actinobacterium-type cell wall.","definition_xrefs":["GOC:mah","PMID:15653820","PMID:3149973","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component assembly","termid":"GO:0022607"},{"relation_name":"part_of","term_name":"Actinobacterium-type cell wall biogenesis","termid":"GO:0071766"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0071554"}],"interesting_parent_ids":["GO:0044085","GO:0071554","GO:0008150"],"is_obsolete":false,"name":"DIM/DIP cell wall layer assembly","synonyms":[{"name":"DIM cell wall layer assembly","type":"exact"},{"name":"DIM/DIP cell wall layer biogenesis","type":"related"},{"name":"PDIM cell wall layer assembly","type":"exact"}],"termid":"GO:0071770"}


id: _global:output_of
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"inverse of has output","direct_ancestors":[{"relation_name":"is_a","term_name":"functionally_related_to","termid":"_global:functionally_related_to"},{"relation_name":"is_a","term_name":"participates_in","termid":"_global:participates_in"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"output_of","secondary_identifiers":["RO:0002353"],"synonyms":[{"name":"formation results from","type":"exact"}],"termid":"_global:output_of"}


id: PBO:0001340
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fun thirty related protein Fft3","termid":"PBO:0001340"}


id: PBO:0045276
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynamin 1 pseudogene 27","termid":"PBO:0045276"}


id: MONDO:0007764
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A sclerozing bone disorder characterized by generalized skeletal densification, particularly of the cranial vault and tubular long bones, which is not associated to an increased risk of fracture.","definition_xrefs":["Orphanet:2790"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete primary bone dysplasia with increased bone density (obsolete MONDO:0019703)","termid":"MONDO:0019703"},{"relation_name":"is_a","term_name":"hyperostosis","termid":"MONDO:0002185"},{"relation_name":"is_a","term_name":"skeletal dysplasia","termid":"MONDO:0018230"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autosomal dominant osteosclerosis, Worth type","secondary_identifiers":["OMIM:607636","OMIM:144750","GARD:390","MEDGEN:140932","UMLS:C0432273","SCTID:254131007","DOID:0080037","icd11.foundation:1038854228"],"synonyms":[{"name":"Ostéosclérose autosomique dominante type Worth","type":"exact"},{"name":"VBCH2","type":"related"},{"name":"Van Buchem disease type 2","type":"related"},{"name":"Van Buchem disease, type 2","type":"related"},{"name":"Worth syndrome","type":"exact"},{"name":"Worth's syndrome","type":"exact"},{"name":"autosomal dominant endosteal hyperostosis","type":"exact"},{"name":"autosomal dominant osteosclerosis","type":"exact"},{"name":"benign form of Worth hyperostosis corticalis generalisata with torus platinus","type":"exact"},{"name":"endosteal hyperostosis, Worth type","type":"exact"},{"name":"endosteal hyperostosis, autosomal dominant","type":"related"},{"name":"hyperostosis corticalis generalisata, benign form of Worth with torus palatinus","type":"related"},{"name":"hyperostosis corticalis generalisata, benign form of Worth, with torus palatinus","type":"related"},{"name":"hyperostosis, endosteal","type":"exact"},{"name":"osteosclerosis of the skull and enlarged mandible","type":"related"},{"name":"osteosclerosis, autosomal dominant","type":"related"},{"name":"osteosclerosis, autosomal dominant, Worth type","type":"related"}],"termid":"MONDO:0007764","xrefs":{"Monarch":{"xref_id":"0007764"}}}


id: PBO:0089962
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome-associated chaperone, zuotin","termid":"PBO:0089962"}


id: PBO:0074734
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 92","termid":"PBO:0074734"}


id: MONDO:0017783
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"pancreas disorder","termid":"MONDO:0002356"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"congenital pancreatic cyst","secondary_identifiers":["Orphanet:313906","UMLS:C0341480","MEDGEN:574418","GARD:21361","SCTID:204808002","ICD10CM:Q45.2","icd11.foundation:981856956"],"synonyms":[{"name":"neonatal congenital pancreatic cyst","type":"exact"},{"name":"true congenital pancreatic cyst","type":"exact"}],"termid":"MONDO:0017783","xrefs":{"Monarch":{"xref_id":"0017783"}}}


id: PBO:0081103
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZEB2 antisense RNA 1","termid":"PBO:0081103"}


id: PATO:0000950
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color between white and black colors.","direct_ancestors":[{"relation_name":"is_a","term_name":"color","termid":"PATO:0000014"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"grey","synonyms":[{"name":"plumbeous","type":"related"}],"termid":"PATO:0000950"}


id: GO:0008530
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Combining with an extracellular peptide to initiate a change in cell activity.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete exogenous peptide receptor activity (obsolete GO:0008530)","synonyms":[{"name":"exogenous peptide receptor activity","type":"exact"}],"termid":"GO:0008530"}


id: MONDO:1010900
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any neuronal ceroid lipofuscinosis that occurs in dogs due to a mutation in the MFSD8 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuronal ceroid lipofuscinosis, dog","termid":"MONDO:1011570"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuronal ceroid lipofuscinosis, MFSD8-related, dog","secondary_identifiers":["OMIA:001962-9615"],"synonyms":[{"name":"CLN7","type":"exact"},{"name":"neuronal ceroid lipofuscinosis, 7, dog","type":"related"}],"termid":"MONDO:1010900","xrefs":{"Monarch":{"xref_id":"1010900"}}}


id: PBO:0072583
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal RNA processing 1B","termid":"PBO:0072583"}


id: PR:Q9C1W4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A UPF0057 membrane protein YqaE that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02628"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane proteolipid 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC713.11c","secondary_identifiers":["UniProtKB:Q9C1W4"],"synonyms":[{"name":"Spom972h-yqaE","type":"exact"}],"termid":"PR:Q9C1W4"}


id: PBO:0045198
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNAJB8 antisense RNA 1","termid":"PBO:0045198"}


id: SO:0001533
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A splice site that is in part of the transcript not normally spliced. They occur via mutation or transcriptional error.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"splice_site","termid":"SO:0000162"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cryptic_splice_site","synonyms":[{"name":"cryptic splice signal","type":"related"},{"name":"cryptic splice site","type":"exact"}],"termid":"SO:0001533"}


id: GO:0005220
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a calcium ion by a channel that opens when inositol 1,4,5-trisphosphate (IP3) has been bound by the channel complex or one of its constituent parts.","definition_xrefs":["GOC:signaling","GOC:mah","PMID:28416699","Wikipedia:Inositol_trisphosphate_receptor","PMID:8660280"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellularly gated calcium channel activity","termid":"GO:0015278"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"inositol 1,4,5-trisphosphate-gated calcium channel activity","secondary_identifiers":["GO:0008095"],"synonyms":[{"name":"IP3 receptor activity","type":"exact"},{"name":"InsP3 receptor","type":"exact"},{"name":"inositol 1,4,5-trisphosphate-sensitive calcium-release channel activity","type":"exact"},{"name":"inositol-1,4,5-trisphosphate receptor activity","type":"exact"}],"termid":"GO:0005220"}


id: PBO:0066490
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ret finger protein like 4A pseudogene 1","termid":"PBO:0066490"}


id: PBO:0070427
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribulose-5-phosphate-3-epimerase pseudogene 5","termid":"PBO:0070427"}


id: GO:0030488
data:
  {"annotated_genes":["SJAG_02386","SJAG_04848","SJAG_00886","SJAG_04649","SJAG_01269","SJAG_02352","SJAG_04890","SJAG_02637","SJAG_00499","SJAG_00325","SJAG_03367","SJAG_04367","SJAG_04680","SJAG_02302","SJAG_01314","SJAG_01375","SJAG_04453","SJAG_04993","SJAG_05249","SJAG_04181","SJAG_04735","SJAG_02099","SJAG_05334","SJAG_01261","SJAG_04736","SJAG_00255","SJAG_02042"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[63220,72660,72748,73038,74075,74426,75651,76286,76586,95064,96583,98433],"is_not":false,"summary":null,"term":"GO:0030488"},{"annotations":[78476],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070901"},{"annotations":[67948,58978],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106004"},{"annotations":[107142,110537],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106217"},{"annotations":[90819,106154],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0002946"},{"annotations":[71546,78475],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0002939"},{"annotations":[104498,73696],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0002940"},{"annotations":[115205],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0002128"},{"annotations":[88621,94291],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0002127"},{"annotations":[98209,103254],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0002130"}]},"cv_name":"biological_process","definition":"The posttranscriptional addition of methyl groups to specific residues in a tRNA molecule.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA methylation","termid":"GO:0001510"},{"relation_name":"is_a","term_name":"tRNA modification","termid":"GO:0006400"}],"gene_count":27,"genes_by_uniquename":{"SJAG_00255":null,"SJAG_00325":null,"SJAG_00499":null,"SJAG_00886":null,"SJAG_01261":null,"SJAG_01269":null,"SJAG_01314":null,"SJAG_01375":null,"SJAG_02042":null,"SJAG_02099":null,"SJAG_02302":null,"SJAG_02352":null,"SJAG_02386":null,"SJAG_02637":null,"SJAG_03367":null,"SJAG_04181":null,"SJAG_04367":null,"SJAG_04453":null,"SJAG_04649":null,"SJAG_04680":null,"SJAG_04735":null,"SJAG_04736":null,"SJAG_04848":null,"SJAG_04890":null,"SJAG_04993":null,"SJAG_05249":null,"SJAG_05334":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0006399","GO:0010467"],"is_obsolete":false,"name":"tRNA methylation","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"termid":"GO:0030488","terms_by_termid":{"GO:0002127":null,"GO:0002128":null,"GO:0002130":null,"GO:0002939":null,"GO:0002940":null,"GO:0002946":null,"GO:0030488":null,"GO:0070901":null,"GO:0106004":null,"GO:0106217":null}}


id: GO:0009874
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A mechanism that functions to prevent self-fertilization in flowering plants that is determined by the diploid genotype of the parent plant. In sporophytic incompatibility the pollen does not germinate, consequently fertilization does not take place.","definition_xrefs":["ISBN:0387987819"],"gene_count":0,"genotype_count":0,"name":"obsolete sporophytic self-incompatibility (obsolete GO:0009874)","synonyms":[{"name":"sporophytic self-incompatibility","type":"exact"}],"termid":"GO:0009874"}


id: PBO:0045666
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DYNAP pseudogene 1","termid":"PBO:0045666"}


id: GO:0060290
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The conversion of a differentiated cell of one fate into a differentiated cell of another fate without first undergoing cell division or reversion to a more primitive or stem cell-like fate.","definition_xrefs":["GOC:dph","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"transdifferentiation","secondary_identifiers":["Wikipedia:Transdifferentiation"],"termid":"GO:0060290"}


id: MONDO:1040049
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any ciliopathy caused by variants in the TTC8 gene.","definition_xrefs":["PMID:19797195","PMID:30901771"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ciliopathy","termid":"MONDO:0005308"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TTC8-related ciliopathy","synonyms":[{"name":"TTC8-related ciliopathy","type":"exact"}],"termid":"MONDO:1040049","xrefs":{"Monarch":{"xref_id":"1040049"}}}


id: MONDO:0012858
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial hemolytic anemia","termid":"MONDO:0003689"},{"relation_name":"is_a","term_name":"hereditary peripheral neuropathy","termid":"MONDO:0020127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0002280"},{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244","MONDO:0005570","MONDO:0002280"],"is_obsolete":false,"name":"primary CD59 deficiency","secondary_identifiers":["Orphanet:169464","UMLS:C2676767","OMIM:612300","MESH:C567355","NANDO:2200804","GARD:17054","MEDGEN:393582"],"synonyms":[{"name":"CD59 deficiency","type":"related"},{"name":"HACD59","type":"related"},{"name":"hemolytic anemia, CD59-mediated, with or without immune-mediated polyneuropathy","type":"related"},{"name":"primary CD59 deficiency","type":"exact"}],"termid":"MONDO:0012858","xrefs":{"Monarch":{"xref_id":"0012858"}}}


id: MONDO:0010534
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Spinocerebellar ataxia, X-linked, type 4 is characterized by ataxia, pyramidal tract signs and adult-onset dementia. It has been described in three generations of one large family. The disease manifests during early childhood with delayed walking and tremor. The pyramidal signs appear progressively and by adulthood memory problems and dementia gradually become apparent. Transmission is X-linked but the causative gene has not yet been identified. The disease is usually fatal during the sixth decade of life.","definition_xrefs":["Orphanet:85292"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"},{"relation_name":"is_a","term_name":"X-linked cerebellar ataxia","termid":"MONDO:0016612"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"X-linked spinocerebellar ataxia type 4","secondary_identifiers":["DOID:0111832","GARD:9980","icd11.foundation:1033689736","MESH:C537316","OMIM:301840","MEDGEN:337122","UMLS:C1844933","SCTID:719818007"],"synonyms":[{"name":"SCAX4","type":"exact"},{"name":"Scax4","type":"related"},{"name":"X-linked ataxia-dementia syndrome","type":"exact"},{"name":"ataxia-dementia syndrome X-linked","type":"related"},{"name":"ataxia-dementia syndrome, X-linked","type":"related"},{"name":"spinocerebellar ataxia X-linked type 4","type":"related"},{"name":"spinocerebellar ataxia, X-linked 4","type":"related"},{"name":"spinocerebellar ataxia, X-linked type 4","type":"exact"}],"termid":"MONDO:0010534","xrefs":{"Monarch":{"xref_id":"0010534"}}}


id: PBO:0003562
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA polymerase epsilon subunit Dpb4","termid":"PBO:0003562"}


id: MONDO:0009417
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"This syndrome is characterized by the association of hypergonadotropic hypogonadism and cataracts with onset during adolescence. It has been described in three brothers from a consanguineous family.","definition_xrefs":["Orphanet:2410"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypergonadotropic hypogonadism-cataract syndrome","secondary_identifiers":["SCTID:721233005","UMLS:C1855859","GARD:298","MEDGEN:344596","MESH:C543092","OMIM:240950"],"synonyms":[{"name":"Lubinsky syndrome","type":"exact"},{"name":"cataracts and testicular failure","type":"related"},{"name":"hypogonadism cataract syndrome","type":"related"},{"name":"hypogonadism-cataract syndrome","type":"related"}],"termid":"MONDO:0009417","xrefs":{"Monarch":{"xref_id":"0009417"}}}


id: GO:0160238
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: reduced [NADPH-hemoprotein reductase] + O2 + a long-chain fatty aldehyde = oxidized [NADPH-hemoprotein reductase] + CO2 + H2O + H+ + a long-chain alkane.","definition_xrefs":["PMID:22927409"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-carbon lyase activity","termid":"GO:0016830"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"long-chain fatty aldehyde oxidative decarbonylase activity","synonyms":[{"name":"aldehyde oxidative decarbonylase activity","type":"broad"}],"termid":"GO:0160238"}


id: PBO:0074253
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLCO1B3-SLCO1B7 readthrough","termid":"PBO:0074253"}


id: PBO:0030069
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_asparagine_import","termid":"PBO:0030069"}


id: PBO:0088360
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyridoxine-pyridoxal-pyridoxamine kinase","termid":"PBO:0088360"}


id: PBO:0000139
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MatE family transporter (predicted)","termid":"PBO:0000139"}


id: PBO:0041761
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calpain 1","termid":"PBO:0041761"}


id: PBO:0029777
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_branched,_elongated_vegetative_cell","termid":"PBO:0029777"}


id: FYPO:0002422
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cell population phenotype in which all vegetative cells arising from a population of germinated spores are inviable, have an abnormal shape and undergo one or two rounds of cell division.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete inviable vegetative cell population after spore germination, single or double cell division, abnormal cell shape (obsolete FYPO:0002422)","synonyms":[{"name":"inviable germinated spore population, single or double cell division, abnormal cell shape","type":"exact"},{"name":"inviable population of germinated spores, single or double cell division, abnormal cell shape","type":"exact"}],"termid":"FYPO:0002422"}


id: PBO:0036346
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-isopropylmalate dehydratase Leu2","termid":"PBO:0036346"}


id: GO:1901901
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any regulation of protein localization to cell division site that is involved in cytokinesis.","definition_xrefs":["PMID:22573892","GOC:TermGenie","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein localization to cell division site","termid":"GO:1901900"},{"relation_name":"part_of","term_name":"cytokinesis","termid":"GO:0000910"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"regulation of protein localization to cell division site involved in cytokinesis","synonyms":[{"name":"regulation of protein localisation to cell division site involved in cytokinesis","type":"exact"}],"termid":"GO:1901901"}


id: PBO:0057388
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 548BC","termid":"PBO:0057388"}


id: PBO:0073156
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEC61 translocon subunit alpha 2","termid":"PBO:0073156"}


id: GO:0009181
data:
  {"annotated_genes":["SJAG_02369","SJAG_05314","SJAG_04192","SJAG_02135","SJAG_02009","SJAG_06622","SJAG_00461","SJAG_03660","SJAG_03903","SJAG_02796","SJAG_02107","SJAG_04048","SJAG_00605","SJAG_01310","SJAG_00685","SJAG_02785","SJAG_00027","SJAG_06621","SJAG_04495","SJAG_03373","SJAG_02945","SJAG_00839","SJAG_03828","SJAG_04334"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104005,106197,109768,109769,95382,109770,109771,78226,103749,109773,109767,98353,94888,105825,98623,105826,116732,105827,106196,109772],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061621"},{"annotations":[88967],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061613"},{"annotations":[76398,73435],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0045820"},{"annotations":[70471],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0006110"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of purine ribonucleoside diphosphate, a compound consisting of a purine base linked to a ribose sugar esterified with diphosphate on the sugar.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleoside diphosphate catabolic process","termid":"GO:0009137"},{"relation_name":"is_a","term_name":"purine ribonucleoside diphosphate metabolic process","termid":"GO:0009179"},{"relation_name":"is_a","term_name":"ribonucleoside diphosphate catabolic process","termid":"GO:0009191"}],"gene_count":24,"genes_by_uniquename":{"SJAG_00027":null,"SJAG_00461":null,"SJAG_00605":null,"SJAG_00685":null,"SJAG_00839":null,"SJAG_01310":null,"SJAG_02009":null,"SJAG_02107":null,"SJAG_02135":null,"SJAG_02369":null,"SJAG_02785":null,"SJAG_02796":null,"SJAG_02945":null,"SJAG_03373":null,"SJAG_03660":null,"SJAG_03828":null,"SJAG_03903":null,"SJAG_04048":null,"SJAG_04192":null,"SJAG_04334":null,"SJAG_04495":null,"SJAG_05314":null,"SJAG_06621":null,"SJAG_06622":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"purine ribonucleoside diphosphate catabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"purine ribonucleoside diphosphate breakdown","type":"exact"},{"name":"purine ribonucleoside diphosphate catabolism","type":"exact"},{"name":"purine ribonucleoside diphosphate degradation","type":"exact"}],"termid":"GO:0009181","terms_by_termid":{"GO:0006110":null,"GO:0045820":null,"GO:0061613":null,"GO:0061621":null}}


id: GO:0007525
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the somatic muscle over time, from its formation to the mature structure. Somatic muscles are striated muscle structures that connect to the exoskeleton or cuticle.","definition_xrefs":["GOC:jid","GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"muscle structure development","termid":"GO:0061061"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"somatic muscle development","termid":"GO:0007525"}


id: PBO:0005517
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"silencing protein Rik1","termid":"PBO:0005517"}


id: GO:0061874
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of hepatic stellate cell contraction.","definition_xrefs":["PMID:24204762"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of hepatic stellate cell contraction","termid":"GO:0061873"},{"relation_name":"is_a","term_name":"positive regulation of actin filament-based movement","termid":"GO:1903116"},{"relation_name":"positively_regulates","term_name":"hepatic stellate cell contraction","termid":"GO:0061872"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of hepatic stellate cell contraction","termid":"GO:0061874"}


id: PBO:0051349
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 2D-38 (pseudogene)","termid":"PBO:0051349"}


id: PBO:0003985
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-1,2-mannosyltransferase Omh2 (predicted)","termid":"PBO:0003985"}


id: MONDO:0014289
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Macrocephaly-developmental delay syndrome is a rare, intellectual disability syndrome characterized by macrocephaly, mild dysmorphic features (frontal bossing, long face, hooded eye lids with small, downslanting palpebral fissures, broad nasal bridge, and prominent chin), global neurodevelopmental delay, behavioral abnormalities (e.g. anxiety, stereotyped movements) and absence or generalized tonic-clonic seizures. Additional features reported in some patients include craniosynostosis, fifth finger clinodactyly, recurrent pneumonia, and hepatosplenomegally.","definition_xrefs":["Orphanet:397612"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"macrocephaly-developmental delay syndrome","secondary_identifiers":["UMLS:C3810225","DOID:0081206","OMIM:615637","GARD:17630","MEDGEN:816555"],"synonyms":[{"name":"MRT41","type":"related"},{"name":"intellectual disability, autosomal recessive 41","type":"related"},{"name":"intellectual disability, autosomal recessive type 41","type":"exact"},{"name":"mental retardation, autosomal recessive 41","type":"related"},{"name":"mental retardation, autosomal recessive type 41","type":"exact"}],"termid":"MONDO:0014289","xrefs":{"Monarch":{"xref_id":"0014289"}}}


id: GO:0000084
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell cycle phase, following G1, during which DNA synthesis takes place as part of a mitotic cell cycle.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S phase","termid":"GO:0051320"},{"relation_name":"part_of","term_name":"mitotic interphase","termid":"GO:0051329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0051329"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051329","GO:0008150"],"is_obsolete":false,"name":"mitotic S phase","synonyms":[{"name":"S phase of mitotic cell cycle","type":"exact"},{"name":"S-phase of mitotic cell cycle","type":"exact"}],"termid":"GO:0000084"}


id: GO:0001325
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Excision from the chromosome and circularization of a region of chromosomal DNA, generally, but not always, via homologous recombination between direct tandem repeats.","definition_xrefs":["GOC:jh","PMID:12044938"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA metabolic process","termid":"GO:0006259"},{"relation_name":"is_a","term_name":"cellular component assembly","termid":"GO:0022607"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0006259","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"formation of extrachromosomal circular DNA","synonyms":[{"name":"assembly of extrachromosomal circular DNA","type":"exact"}],"termid":"GO:0001325"}


id: PBO:0043064
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CHRFAM7A pseudogene 2","termid":"PBO:0043064"}


id: PBO:0001685
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"promoter contains DRE element","termid":"PBO:0001685"}


id: GO:1903253
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of hercynylcysteine sulfoxide.","definition_xrefs":["GO_REF:0000068","GOC:TermGenie","PMID:24828577"],"gene_count":0,"genotype_count":0,"name":"obsolete hercynylcysteine sulfoxide biosynthetic process (obsolete GO:1903253)","synonyms":[{"name":"hercynylcysteine sulfoxide anabolism","type":"exact"},{"name":"hercynylcysteine sulfoxide biosynthesis","type":"exact"},{"name":"hercynylcysteine sulfoxide formation","type":"exact"},{"name":"hercynylcysteine sulfoxide synthesis","type":"exact"}],"termid":"GO:1903253"}


id: PBO:0048251
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin G associated kinase","termid":"PBO:0048251"}


id: PBO:0090551
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S12 Mrps12b","termid":"PBO:0090551"}


id: MONDO:0018393
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Male infertility with azoospermia or oligospermia due to single gene mutation is a rare, genetic male infertility due to sperm disorder characterized by the absence of a measurable amount of spermatozoa in the ejaculate (azoospermia), or a number of sperm in the ejaculate inferior to 15 million/mL (oligozoospermia), resulting from a mutation in a single gene known to cause azoo- or oligo-spermia. Sperm morphology may be normal.","definition_xrefs":["Orphanet:399805"],"gene_count":0,"genotype_count":0,"name":"obsolete male infertility with azoospermia or oligozoospermia due to single gene mutation (obsolete MONDO:0018393)","termid":"MONDO:0018393","xrefs":{"Monarch":{"xref_id":"0018393"}}}


id: GO:0106249
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex regulating Nodal signaling. Subunits are highly conserved in vertebrates and include Nicalin, NOMO and TMEM147.","definition_xrefs":["GOC:bhm","GOC:al","PMID:20538592"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"Nicalin-NOMO complex","synonyms":[{"name":"Nicalin-TMEM147-NOMO complex","type":"exact"}],"termid":"GO:0106249"}


id: GO:0140357
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of heme from inside the vacuole across the vacuolar membrane and into the cytosol.","definition_xrefs":["PMID:28193844"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vacuolar transmembrane transport","termid":"GO:0034486"},{"relation_name":"is_a","term_name":"heme transmembrane transport","termid":"GO:0035351"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"heme export from vacuole to cytoplasm","termid":"GO:0140357"}


id: PBO:0054653
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2058","termid":"PBO:0054653"}


id: PBO:0081229
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger MYND-type containing 10","termid":"PBO:0081229"}


id: PBO:0058128
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4430","termid":"PBO:0058128"}


id: SO:0000624
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A specific structure at the end of a linear chromosome, required for the integrity and maintenance of the end.","definition_xrefs":["SO:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosomal_structural_element","termid":"SO:0000628"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"telomere","secondary_identifiers":["http://en.wikipedia.org/wiki/Telomere"],"synonyms":[{"name":"INSDC_feature:telomere","type":"exact"},{"name":"telomeric DNA","type":"exact"},{"name":"telomeric sequence","type":"exact"}],"termid":"SO:0000624"}


id: GO:0046656
data:
  {"annotated_genes":["SJAG_01126","SJAG_04156","SJAG_02225","SJAG_03275","SJAG_02408","SJAG_00815","SJAG_00106"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[57122,60706,69368,105155,106457,108724,112799],"is_not":false,"summary":null,"term":"GO:0046656"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of folic acid, pteroylglutamic acid.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"folic acid-containing compound biosynthetic process","termid":"GO:0009396"},{"relation_name":"is_a","term_name":"water-soluble vitamin biosynthetic process","termid":"GO:0042364"},{"relation_name":"is_a","term_name":"amide biosynthetic process","termid":"GO:0043604"},{"relation_name":"is_a","term_name":"dicarboxylic acid biosynthetic process","termid":"GO:0043650"},{"relation_name":"is_a","term_name":"folic acid metabolic process","termid":"GO:0046655"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00106":null,"SJAG_00815":null,"SJAG_01126":null,"SJAG_02225":null,"SJAG_02408":null,"SJAG_03275":null,"SJAG_04156":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006766"},{"rel_name":"is_a","termid":"GO:0042559"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0042559","GO:0008150","GO:0044281","GO:0006766"],"is_obsolete":false,"name":"folic acid biosynthetic process","references_by_uniquename":{"GO_REF:0000043":null,"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:Folic_acid"],"synonyms":[{"name":"folate biosynthesis","type":"exact"},{"name":"folate biosynthetic process","type":"exact"},{"name":"folic acid anabolism","type":"exact"},{"name":"folic acid biosynthesis","type":"exact"},{"name":"folic acid formation","type":"exact"},{"name":"folic acid synthesis","type":"exact"},{"name":"vitamin B9 biosynthesis","type":"exact"},{"name":"vitamin B9 biosynthetic process","type":"exact"},{"name":"vitamin M biosynthesis","type":"exact"},{"name":"vitamin M biosynthetic process","type":"exact"}],"termid":"GO:0046656","terms_by_termid":{"GO:0046656":null}}


id: PBO:0047260
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 242 member C","termid":"PBO:0047260"}


id: PBO:0048802
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein subunit alpha transducin 2","termid":"PBO:0048802"}


id: MONDO:0021805
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"acromesomelic dysplasia","termid":"MONDO:0019696"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"acromesomelic dysplasia, Campailla Martinelli type","secondary_identifiers":["MEDGEN:418955","UMLS:C2930969","MESH:C535659","GARD:505"],"synonyms":[{"name":"acromesomelic dysplasia Campailla Martinelli type","type":"related"},{"name":"mesomelic dwarfism Campailla-Martinelli type","type":"related"}],"termid":"MONDO:0021805","xrefs":{"Monarch":{"xref_id":"0021805"}}}


id: PBO:0089439
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COPII adaptor Erv29","termid":"PBO:0089439"}


id: GO:0043878
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-glyceraldehyde 3-phosphate + NAD+ + H2O = 3-phospho-D-glycerate + NADH + H+.","definition_xrefs":["PMID:9497334"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glyceraldehyde-3-phosphate dehydrogenase [NAD(P)+] (non-phosphorylating) activity","termid":"GO:0120533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"glyceraldehyde-3-phosphate dehydrogenase (NAD+) (non-phosphorylating) activity","secondary_identifiers":["MetaCyc:RXN-3443","RHEA:42760"],"synonyms":[{"name":"NAD+-dependent glyceraldehyde-3-phosphate dehydrogenase activity","type":"exact"},{"name":"glyceraldehyde-3-phosphate dehydrogenase (NAD) (non-phosphorylating) activity","type":"exact"},{"name":"glyceraldehyde-3-phosphate dehydrogenase (NAD) activity","type":"exact"},{"name":"non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase (NAD)","type":"exact"}],"termid":"GO:0043878"}


id: GO:0060817
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Compensating for the two-fold variation in X-chromosome:autosome ratios between sexes by a global inactivation of all, or most of, the genes specifically on the paternal X-chromosome in the XX sex.","definition_xrefs":["GOC:tb","GOC:dph","GOC:sdb_2009"],"gene_count":0,"genotype_count":0,"name":"obsolete inactivation of paternal X chromosome (obsolete GO:0060817)","termid":"GO:0060817"}


id: FYECO:0000133
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Describes experimental conditions in which the amount of oxygen available during growth or the assay was controlled.","definition_xrefs":["PomBase:al"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE FYECO:0000133 oxygen level (obsolete FYECO:0000133)","termid":"FYECO:0000133"}


id: GO:0044385
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Penetrating at least one phospholipid bilayer of a membrane. May also refer to the state of being buried in the bilayer with no exposure outside the bilayer. When used to describe a protein, indicates that all or part of the peptide sequence is embedded in the membrane. Occurring in a host cell.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete integral to membrane of host cell (obsolete GO:0044385)","termid":"GO:0044385"}


id: PBO:0058215
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4507","termid":"PBO:0058215"}


id: PBO:0078445
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor gamma joining P","termid":"PBO:0078445"}


id: GO:0071126
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alphaV-beta6 integrin complex bound to osteopontin.","definition_xrefs":["PMID:16005200"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005886","GO:0005575"],"is_obsolete":false,"name":"alphaV-beta6 integrin-osteopontin complex","synonyms":[{"name":"ITGAV-ITGB6-SPP1 complex","type":"narrow"}],"termid":"GO:0071126"}


id: GO:0055072
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process involved in the maintenance of an internal steady state of iron ions within an organism or cell.","definition_xrefs":["GOC:ai","GOC:jid","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete iron ion homeostasis (obsolete GO:0055072)","synonyms":[{"name":"iron homeostasis","type":"broad"}],"termid":"GO:0055072"}


id: FYECO:0000086
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which ornithine was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ ornithine","termid":"FYECO:0000086"}


id: PBO:0074835
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 30","termid":"PBO:0074835"}


id: PBO:0119738
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"palmitoyl-(protein) hydrolase Pha1","termid":"PBO:0119738"}


id: PBO:0065852
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB11 family interacting protein 3","termid":"PBO:0065852"}


id: MONDO:0007021
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Allergic reaction to wheat that is triggered by the immune system.","definition_xrefs":["EFO:1001243"],"gene_count":0,"genotype_count":0,"name":"obsolete wheat allergic disease (obsolete MONDO:0007021)","secondary_identifiers":["MESH:D021182","DOID:3660","ICD9:995.3","SCTID:420174000"],"synonyms":[{"name":"allergic disease from wheat based food product","type":"exact"},{"name":"allergy of wheat based food product","type":"exact"},{"name":"allergy to wheat","type":"exact"},{"name":"wheat allergic reaction","type":"related"},{"name":"wheat allergy","type":"related"},{"name":"wheat based food product allergic disease","type":"exact"}],"termid":"MONDO:0007021","xrefs":{"Monarch":{"xref_id":"0007021"}}}


id: GO:2000566
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of CD8-positive, alpha-beta T cell proliferation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of alpha-beta T cell proliferation","termid":"GO:0046641"},{"relation_name":"is_a","term_name":"regulation of CD8-positive, alpha-beta T cell proliferation","termid":"GO:2000564"},{"relation_name":"is_a","term_name":"positive regulation of CD8-positive, alpha-beta T cell activation","termid":"GO:2001187"},{"relation_name":"positively_regulates","term_name":"CD8-positive, alpha-beta T cell proliferation","termid":"GO:0035740"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"positive regulation of CD8-positive, alpha-beta T cell proliferation","termid":"GO:2000566"}


id: GO:0007482
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the haltere over time, from its formation to the mature structure. The haltere is the club-shaped 'balancers' found on each side of the metathorax among the true flies (Diptera). They are the much-modified hind wings.","definition_xrefs":["GOC:jid","PMID:32659004"],"direct_ancestors":[{"relation_name":"is_a","term_name":"imaginal disc-derived appendage development","termid":"GO:0048737"},{"relation_name":"part_of","term_name":"haltere disc development","termid":"GO:0035216"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"haltere development","termid":"GO:0007482"}


id: PBO:0064561
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein O-mannosyltransferase 2","termid":"PBO:0064561"}


id: GO:0060085
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which the extent of smooth muscle contraction is reduced in the bladder outlet that contributes to the expulsion of urine from the body.","definition_xrefs":["GOC:dph","PMID:15827347"],"direct_ancestors":[{"relation_name":"is_a","term_name":"relaxation of smooth muscle","termid":"GO:0044557"},{"relation_name":"is_a","term_name":"negative regulation of smooth muscle contraction","termid":"GO:0045986"},{"relation_name":"part_of","term_name":"micturition","termid":"GO:0060073"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"smooth muscle relaxation of the bladder outlet","synonyms":[{"name":"synaptic transmission involved in urination","type":"exact"}],"termid":"GO:0060085"}


id: PBO:0086019
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies; associates with rDNA chromatin in vivo; TBS1 has a paralog, HAL9, that arose from the whole genome duplication","termid":"PBO:0086019"}


id: PBO:0110500
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"STMN3 pseudogene 1","termid":"PBO:0110500"}


id: MONDO:1012278
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"bird disease","termid":"MONDO:0024905"},{"relation_name":"is_a","term_name":"tremor, non-human animal","termid":"MONDO:1011861"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tremor, chicken","secondary_identifiers":["OMIA:001016-9031"],"termid":"MONDO:1012278","xrefs":{"Monarch":{"xref_id":"1012278"}}}


id: PBO:0028998
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_cell_population_growth_on_proline_nitrogen_source","termid":"PBO:0028998"}


id: PBO:0066973
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 276","termid":"PBO:0066973"}


id: PBO:0085563
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein distantly similar to ceramide synthases, Lag1p and Lac1p; mutation confers sensitivity to inhibitors of sphingolipid biosynthesis","termid":"PBO:0085563"}


id: MONDO:0054696
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"immunodeficiency disease","termid":"MONDO:0021094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"immunodeficiency 53","secondary_identifiers":["MEDGEN:1612104","UMLS:C4539811","OMIM:617585","DOID:0111992"],"synonyms":[{"name":"IMD53","type":"related"},{"name":"immunodeficiency 53","type":"exact"}],"termid":"MONDO:0054696","xrefs":{"Monarch":{"xref_id":"0054696"}}}


id: MONDO:0023129
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Fara Chlupackova syndrome (obsolete MONDO:0023129)","termid":"MONDO:0023129","xrefs":{"Monarch":{"xref_id":"0023129"}}}


id: SO:0000485
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Genomic DNA of immunoglobulin/T-cell receptor gene in rearranged configuration including at least one DJ-gene, and one J-gene.","direct_ancestors":[{"relation_name":"has_part","term_name":"J_gene_segment","termid":"SO:0000470"},{"relation_name":"has_part","term_name":"DJ_gene_segment","termid":"SO:0000572"},{"relation_name":"is_a","term_name":"vertebrate_immunoglobulin_T_cell_receptor_rearranged_gene_cluster","termid":"SO:0000938"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DJ_J_cluster","synonyms":[{"name":"(DJ)-J-CLUSTER","type":"exact"},{"name":"DJ J cluster","type":"exact"}],"termid":"SO:0000485"}


id: GO:0015810
data:
  {"annotated_genes":["SJAG_00522"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96919],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070778"}]},"cv_name":"biological_process","definition":"The process in which aspartate is transported across a lipid bilayer, from one side of a membrane to the other.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid transmembrane transport","termid":"GO:0003333"},{"relation_name":"is_a","term_name":"C4-dicarboxylate transport","termid":"GO:0015740"},{"relation_name":"is_a","term_name":"nitrogen compound transport","termid":"GO:0071705"},{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transport","termid":"GO:1905039"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00522":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"aspartate transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"aspartate transport","type":"broad"},{"name":"mitochondrial aspartate/glutamate transport","type":"related"}],"termid":"GO:0015810","terms_by_termid":{"GO:0070778":null}}


id: PBO:0002869
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucose 1-dehydrogenase (NADP+) (predicted)","termid":"PBO:0002869"}


id: GO:0042163
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to the beta subunit of interleukin-12.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"interleukin-12 binding","termid":"GO:0019972"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"interleukin-12 beta subunit binding","synonyms":[{"name":"CLMFp40 binding","type":"exact"},{"name":"IL-12B binding","type":"exact"},{"name":"IL-12p40 binding","type":"exact"},{"name":"NKSFp40 binding","type":"exact"}],"termid":"GO:0042163"}


id: GO:0090737
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that contributes to the maintenance of proper telomeric length and structure via the activation of telomere shortening pathways that compensate telomerase-dependent excessive telomere elongation. Telomere attrition is mediated by a mechanism which involves the generation of single-stranded C-rich telomeric DNA, and the formation and removal of double-stranded telomeric circular DNA (T-circles). Telomere trimming is an independent pathway to recombination-mediated telomere elongation and the well-documented gradual telomere attrition that accompanies cellular replication.","definition_xrefs":["GOC:BHF_telomere","PMID:27918544","GOC:BHF","GOC:nc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"telomere maintenance","termid":"GO:0000723"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0032200"}],"interesting_parent_ids":["GO:0008150","GO:0032200","GO:0006259"],"is_obsolete":false,"name":"telomere maintenance via telomere trimming","termid":"GO:0090737"}


id: GO:0030874
data:
  {"annotated_genes":["SJAG_02723","SJAG_02879","SJAG_05180","SJAG_01005","SJAG_01509","SJAG_03905","SJAG_05237","SJAG_03603","SJAG_03923","SJAG_04210"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[92727,95681,98909,103267,107015,108160],"is_not":false,"summary":null,"term":"GO:0030874"},{"annotations":[101530,115658,119614,99638],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030875"}]},"cv_name":"cellular_component","definition":"The portion of nuclear chromatin associated with the nucleolus; includes the DNA encoding the ribosomal RNA.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromatin","termid":"GO:0000785"},{"relation_name":"part_of","term_name":"nuclear chromosome","termid":"GO:0000228"},{"relation_name":"part_of","term_name":"nucleolus","termid":"GO:0005730"}],"gene_count":10,"genes_by_uniquename":{"SJAG_01005":null,"SJAG_01509":null,"SJAG_02723":null,"SJAG_02879":null,"SJAG_03603":null,"SJAG_03905":null,"SJAG_03923":null,"SJAG_04210":null,"SJAG_05180":null,"SJAG_05237":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"part_of","termid":"GO:0005730"}],"interesting_parent_ids":["GO:0005694","GO:0005575","GO:0005634","GO:0005730"],"is_obsolete":false,"name":"nucleolar chromatin","references_by_uniquename":{"GO_REF:0000107":null,"PMID:24184107":null},"termid":"GO:0030874","terms_by_termid":{"GO:0030874":null,"GO:0030875":null}}


id: GO:0033044
data:
  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id: SO:0002162
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A short tandem repeat variant containing more repeat units than the reference sequence.","direct_ancestors":[{"relation_name":"is_a","term_name":"short_tandem_repeat_change","termid":"SO:0002161"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"short_tandem_repeat_expansion","synonyms":[{"name":"short tandem repeat expansion","type":"exact"},{"name":"str expansion","type":"exact"}],"termid":"SO:0002162"}


id: MONDO:0023283
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A granulosa-stromal cell tumor that arises from the ovary. It is characterized by the presence of granulosa cells that comprise at least ten percent of the cellular population. The granulosa cells are often found in a background that contains theca and fibrous cells. There are two major subtypes recognized, adult and juvenile granulosa cell tumor. Clinically, patients may present with an abdominal mass. Symptoms depend on the patient's age. The most important indicator of prognosis is tumor stage. Age over forty years at the time of the initial diagnosis, large tumor size, bilaterality, cellular atypia, and increased mitotic activity are factors indicating a potentially aggressive clinical course and relative poor prognosis.","definition_xrefs":["NCIT:C6261"],"direct_ancestors":[{"relation_name":"is_a","term_name":"granulosa cell tumor","termid":"MONDO:0006036"},{"relation_name":"is_a","term_name":"ovarian sex cord-stromal tumor","termid":"MONDO:0021657"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ovarian granulosa cell tumor","secondary_identifiers":["SCTID:254863004","MEDGEN:277970","UMLS:C1370419","MESH:C537296"],"synonyms":[{"name":"GCT of the ovary","type":"related"},{"name":"adult granulosa cell tumor of the ovary","type":"related"},{"name":"adult granulosa cell tumour of the ovary","type":"related"},{"name":"granulosa cell neoplasm of ovary","type":"exact"},{"name":"granulosa cell neoplasm of the ovary","type":"exact"},{"name":"granulosa cell tumor of ovary","type":"exact"},{"name":"granulosa cell tumor of the ovary","type":"exact"},{"name":"granulosa cell tumour of ovary","type":"exact"},{"name":"granulosa cell tumour of the ovary","type":"exact"},{"name":"granulosa theca cell tumor","type":"related"},{"name":"granulosa theca cell tumor of the ovary","type":"related"},{"name":"granulosa theca cell tumour","type":"related"},{"name":"granulosa theca cell tumour of the ovary","type":"related"},{"name":"ovarian granulosa cell neoplasm","type":"exact"},{"name":"ovarian granulosa cell tumor","type":"exact"},{"name":"ovary granulosa cell tumor","type":"exact"},{"name":"ovary granulosa cell tumour","type":"exact"}],"termid":"MONDO:0023283","xrefs":{"Monarch":{"xref_id":"0023283"}}}


id: GO:0032412
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the activity of an ion transporter.","definition_xrefs":["GOC:mah","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transmembrane transporter activity","termid":"GO:0022898"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"regulation of monoatomic ion transmembrane transporter activity","synonyms":[{"name":"regulation of ion transmembrane transporter activity","type":"broad"},{"name":"regulation of ion transporter activity","type":"exact"}],"termid":"GO:0032412"}


id: MONDO:0003273
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant neoplasm involving the sternum","direct_ancestors":[{"relation_name":"is_a","term_name":"bone cancer","termid":"MONDO:0002129"},{"relation_name":"is_a","term_name":"thoracic cancer","termid":"MONDO:0003274"},{"relation_name":"is_a","term_name":"sternal neoplasm","termid":"MONDO:0021578"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"sternum cancer","secondary_identifiers":["UMLS:C1382025","NCIT:C8408","DOID:5090","MEDGEN:277996"],"synonyms":[{"name":"cancer of sternum","type":"exact"},{"name":"malignant neoplasm of sternum","type":"exact"},{"name":"malignant neoplasm of the sternum","type":"exact"},{"name":"malignant sternal neoplasm","type":"exact"},{"name":"malignant sternal tumor","type":"exact"},{"name":"malignant sternal tumour","type":"exact"},{"name":"malignant sternum neoplasm","type":"exact"},{"name":"malignant tumor of sternum","type":"exact"},{"name":"malignant tumor of the sternum","type":"exact"},{"name":"malignant tumour of sternum","type":"exact"},{"name":"malignant tumour of the sternum","type":"exact"},{"name":"neoplasm of sternum","type":"broad"},{"name":"sternal tumour","type":"broad"},{"name":"sternum cancer","type":"exact"}],"termid":"MONDO:0003273","xrefs":{"Monarch":{"xref_id":"0003273"}}}


id: FYPO:0005708
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  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the interphase microtubule organizing center (iMTOC) is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to cytoskeleton during vegetative growth","termid":"FYPO:0003184"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000138","FYPO:0000257","FYPO:0001312","FYPO:0000002"],"is_obsolete":false,"name":"normal protein localization to iMTOC","synonyms":[{"name":"normal protein localisation to iMTOC","type":"exact"},{"name":"normal protein localization to iMTOC during mitotic cell cycle","type":"related"},{"name":"normal protein localization to iMTOC during vegetative growth","type":"exact"},{"name":"normal protein localization to interphase microtubule organizing center","type":"exact"}],"termid":"FYPO:0005708"}


id: GO:0032683
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of connective tissue growth factor production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cytokine production","termid":"GO:0001818"},{"relation_name":"is_a","term_name":"regulation of connective tissue growth factor production","termid":"GO:0032643"},{"relation_name":"negatively_regulates","term_name":"connective tissue growth factor production","termid":"GO:0032601"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"negative regulation of connective tissue growth factor production","secondary_identifiers":["GO:0045421"],"synonyms":[{"name":"down regulation of connective tissue growth factor production","type":"exact"},{"name":"down-regulation of connective tissue growth factor production","type":"exact"},{"name":"downregulation of connective tissue growth factor production","type":"exact"},{"name":"inhibition of connective tissue growth factor production","type":"narrow"},{"name":"negative regulation of CCN2 production","type":"exact"},{"name":"negative regulation of CTGF production","type":"exact"},{"name":"negative regulation of Fisp12 production","type":"exact"},{"name":"negative regulation of Hcs24 production","type":"exact"},{"name":"negative regulation of IGFBP8 production","type":"exact"},{"name":"negative regulation of connective tissue growth factor biosynthetic process","type":"narrow"},{"name":"negative regulation of hypertrophic chondrocyte-specific gene product 24 production","type":"exact"}],"termid":"GO:0032683"}


id: GO:0044573
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The biochemical reactions and pathways resulting in the formation of a P-cluster of a nitrogenase, a high-nuclearity, Fe/S-only cluster that can be viewed as two [4Fe-4S] sub-clusters sharing a gamma-6-sulfide.","definition_xrefs":["PMID:17563349"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iron-sulfur cluster assembly","termid":"GO:0016226"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0016226"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0016226"],"is_obsolete":false,"name":"nitrogenase P cluster assembly","synonyms":[{"name":"nitrogenase P cluster biosynthesis","type":"exact"},{"name":"nitrogenase P cluster maturation","type":"exact"}],"termid":"GO:0044573"}


id: PBO:0080562
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WBP11 pseudogene 2","termid":"PBO:0080562"}


id: GO:0019413
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of acetate, the anion of acetic acid.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetate metabolic process","termid":"GO:0006083"},{"relation_name":"is_a","term_name":"monocarboxylic acid biosynthetic process","termid":"GO:0072330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"acetate biosynthetic process","synonyms":[{"name":"acetate anabolism","type":"exact"},{"name":"acetate biosynthesis","type":"exact"},{"name":"acetate formation","type":"exact"},{"name":"acetate synthesis","type":"exact"}],"termid":"GO:0019413"}


id: GO:0090692
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The site on the mitochondrial membrane where the separation of a single continuous mitochondrial membrane into two membranes occurs as a final step in mitochondrial fission.","definition_xrefs":["GOC:PARL","PMID:26618722","GOC:bc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"mitochondrial membrane","termid":"GO:0031966"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005739"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005739","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"mitochondrial membrane scission site","termid":"GO:0090692"}


id: SO:0001503
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A transcript for which no open reading frame has been identified and for which no other function has been determined.","definition_xrefs":["MGI:hdeen"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcript","termid":"SO:0000673"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"processed_transcript","synonyms":[{"name":"processed transcript","type":"exact"}],"termid":"SO:0001503"}


id: PBO:0044931
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diacylglycerol kinase kappa","termid":"PBO:0044931"}


id: PBO:0051682
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inhibin subunit beta E","termid":"PBO:0051682"}


id: PBO:0054464
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1863","termid":"PBO:0054464"}


id: MONDO:0010717
data:
  {"annotated_genes":["SJAG_02006"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86807],"is_not":false,"summary":null,"term":"MONDO:0010717"}]},"cv_name":"mondo","definition":"Pyruvate dehydrogenase E1-alpha deficiency is the most frequent form of pyruvate dehydrogenase deficiency (PDHD) characterized by variable lactic acidosis, impaired psychomotor development, hypotonia and neurological dysfunction.","definition_xrefs":["Orphanet:79243"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyruvate dehydrogenase deficiency","termid":"MONDO:0019169"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02006":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0004069","MONDO:0005244","MONDO:0037792","MONDO:0005066"],"is_obsolete":false,"name":"pyruvate dehydrogenase E1-alpha deficiency","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MESH:C564071","GARD:4620","ICD9:277.6","OMIM:312170","UMLS:C1839413","SCTID:124593001","MEDGEN:326486"],"synonyms":[{"name":"PDH deficiency","type":"related"},{"name":"PDHAD","type":"exact"},{"name":"ataxia with lactic acidosis 1","type":"related"},{"name":"ataxia, intermittent, with abnormal pyruvate metabolism","type":"related"},{"name":"ataxia, intermittent, with pyruvate dehydrogenase deficiency","type":"related"},{"name":"ataxia, intermittent, with pyruvate dehydrogenase, or decarboxylase, deficiency","type":"related"},{"name":"lactic acidemia, thiamine-responsive","type":"related"},{"name":"pyruvate decarboxylase deficiency","type":"broad"},{"name":"pyruvate dehydrogenase Complex deficiency","type":"related"},{"name":"pyruvate dehydrogenase E1-ALPHA deficiency","type":"related"},{"name":"pyruvate dehydrogenase E1-alpha deficiency","type":"exact"},{"name":"pyruvate dehydrogenase complex E1 component subunit alpha deficiency","type":"exact"},{"name":"pyruvate dehydrogenase e1-alpha deficiency, X-linked dominant","type":"exact"}],"termid":"MONDO:0010717","terms_by_termid":{"MONDO:0010717":null},"xrefs":{"Monarch":{"xref_id":"0010717"}}}


id: PBO:0059715
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO2 pseudogene 23","termid":"PBO:0059715"}


id: PBO:0035715
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_methylation_during_vegetative_growth","termid":"PBO:0035715"}


id: GO:0048500
data:
  {"annotated_genes":["SJAG_01840","SJAG_03684","SJAG_01282","SJAG_02456","SJAG_01759","SJAG_03411"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[56982,73366,75792,62788,72827,91190],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005786"}]},"cv_name":"cellular_component","definition":"A complex of protein and RNA which facilitates translocation of proteins across membranes.","definition_xrefs":["GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribonucleoprotein complex","termid":"GO:1990904"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01282":null,"SJAG_01759":null,"SJAG_01840":null,"SJAG_02456":null,"SJAG_03411":null,"SJAG_03684":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"signal recognition particle","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000043":null,"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:Signal_recognition_particle"],"termid":"GO:0048500","terms_by_termid":{"GO:0005786":null}}


id: MONDO:1012032
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"brachycephalic airway obstruction syndrome, non-human animal","termid":"MONDO:1011924"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brachycephalic airway obstruction syndrome, dog","secondary_identifiers":["OMIA:000145-9615"],"termid":"MONDO:1012032","xrefs":{"Monarch":{"xref_id":"1012032"}}}


id: PBO:0051379
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 6-21 (non-functional)","termid":"PBO:0051379"}


id: PBO:0003493
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"focus formation at DNA damage sites, Swi5_dependent","termid":"PBO:0003493"}


id: PBO:0051446
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable 3-32 (non-functional)","termid":"PBO:0051446"}


id: GO:0050179
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-threo-3-phenylserine = benzaldehyde + glycine.","definition_xrefs":["EC:4.1.2.26","RHEA:21712"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde-lyase activity","termid":"GO:0016832"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"phenylserine aldolase activity","secondary_identifiers":["KEGG_REACTION:R01766","MetaCyc:PHENYLSERINE-ALDOLASE-RXN"],"synonyms":[{"name":"L-threo-3-phenylserine benzaldehyde-lyase (glycine-forming)","type":"related"},{"name":"L-threo-3-phenylserine benzaldehyde-lyase activity","type":"related"}],"termid":"GO:0050179"}


id: PBO:0055379
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2809","termid":"PBO:0055379"}


id: MOD:00090
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-alanine residue to L-alanine amide.","definition_xrefs":["PubMed:952951","RESID:AA0081","PubMed:1377792","PubMed:2069951","PubMed:8472537"],"direct_ancestors":[{"relation_name":"is_a","term_name":"C1-amidated residue","termid":"MOD:00883"},{"relation_name":"is_a","term_name":"modified L-alanine residue","termid":"MOD:00901"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-alanine amide","synonyms":[{"name":"(2S)-2-aminopropanamide","type":"exact"},{"name":"AlaN","type":"exact"},{"name":"L-alanine amide","type":"exact"},{"name":"MOD_RES Alanine amide","type":"exact"},{"name":"alaninamide","type":"exact"},{"name":"amidated L-alanine","type":"exact"}],"termid":"MOD:00090"}


id: MONDO:0003114
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete bone giant cell sarcoma (obsolete MONDO:0003114)","termid":"MONDO:0003114","xrefs":{"Monarch":{"xref_id":"0003114"}}}


id: SO:0000463
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that encodes more than one transcript.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gene_attribute","termid":"SO:0000401"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"encodes_alternately_spliced_transcripts","synonyms":[{"name":"encodes alternately spliced transcripts","type":"exact"}],"termid":"SO:0000463"}


id: MONDO:0008850
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cooper-Wang-Jabs syndrome is a multiple malformation syndrome characterized by atresia of the auditory canal together with ventricular septal defect, anteriorly displaced anus, mild clubfoot, and intellectual deficit. It has been described only once, in two sisters. The mode of inheritance is most likely autosomal recessive.","definition_xrefs":["Orphanet:1488"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cooper-Jabs syndrome","secondary_identifiers":["OMIM:209770","SCTID:720748007","UMLS:C1859591","GARD:16567","MEDGEN:347912","MESH:C565923"],"synonyms":[{"name":"aural atresia, multiple congenital anomalies, and intellectual disability","type":"related"},{"name":"aural atresia, multiple congenital anomalies, and mental retardation","type":"related"},{"name":"aural atresia-multiple congenital anomalies-intellectual disability syndrome","type":"exact"}],"termid":"MONDO:0008850","xrefs":{"Monarch":{"xref_id":"0008850"}}}


id: GO:0098825
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The guanylylation of peptidyl-histidine to form (phospho-5'-guanosine)-L-histidine.","definition_xrefs":["RESID:AA0325"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-histidine guanylation (obsolete GO:0098825)","termid":"GO:0098825"}


id: PBO:0044015
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"casein kinase 1 delta","termid":"PBO:0044015"}


id: PBO:0040280
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase Na+/K+ transporting subunit alpha 1","termid":"PBO:0040280"}


id: PBO:0044905
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"desumoylating isopeptidase 2","termid":"PBO:0044905"}


id: MONDO:0007200
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Blepharonasofacial syndrome is a rare otorhinolaryngological malformation syndrome characterized by a distinctive mask-like facial dysmorphism, lacrimal duct obstruction, extrapyramidal features, digital malformations and intellectual disability.","definition_xrefs":["Orphanet:1252"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"blepharonasofacial malformation syndrome","secondary_identifiers":["UMLS:C0796197","SCTID:717913006","MEDGEN:163226","GARD:4238","OMIM:110050","MESH:C536303"],"synonyms":[{"name":"Pashayan syndrome","type":"exact"},{"name":"Pashayan-Prozansky syndrome","type":"exact"},{"name":"blepharonasofacial malformation syndrome","type":"exact"}],"termid":"MONDO:0007200","xrefs":{"Monarch":{"xref_id":"0007200"}}}


id: MONDO:0000072
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete myopathy, reducing body, X-linked (obsolete MONDO:0000072)","termid":"MONDO:0000072","xrefs":{"Monarch":{"xref_id":"0000072"}}}


id: GO:0102038
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-nitrobenzyl alcohol + O2 = 4-nitrobenzaldehyde + hydrogen peroxide.","definition_xrefs":["GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor","termid":"GO:0016899"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"4-nitrobenzyl alcohol oxidase activity","secondary_identifiers":["MetaCyc:R362-RXN"],"termid":"GO:0102038"}


id: GO:0045881
data:
  {"annotated_genes":["SJAG_02169","SJAG_04853"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102650],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0075296"},{"annotations":[91090],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903024"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of sporulation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of sporulation resulting in formation of a cellular spore","termid":"GO:0042173"},{"relation_name":"is_a","term_name":"positive regulation of sporulation","termid":"GO:0043938"},{"relation_name":"positively_regulates","term_name":"sporulation resulting in formation of a cellular spore","termid":"GO:0030435"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02169":null,"SJAG_04853":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of sporulation resulting in formation of a cellular spore","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of sporulation","type":"narrow"},{"name":"stimulation of sporulation","type":"narrow"},{"name":"up regulation of sporulation","type":"exact"},{"name":"up-regulation of sporulation","type":"exact"},{"name":"upregulation of sporulation","type":"exact"}],"termid":"GO:0045881","terms_by_termid":{"GO:0075296":null,"GO:1903024":null}}


id: MONDO:0011255
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"mandibulofacial dysostosis","termid":"MONDO:0015483"},{"relation_name":"is_a","term_name":"dysostosis","termid":"MONDO:0018234"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"mandibulofacial dysostosis-macroblepharon-macrostomia syndrome","secondary_identifiers":["MEDGEN:355927","Orphanet:357158","UMLS:C1865181","MESH:C566520","GARD:17547","OMIM:602562"],"synonyms":[{"name":"Verloes-Lesenfants syndrome","type":"related"},{"name":"macroblepharon, ectropion, hypertelorism, and macrostomia","type":"related"},{"name":"macroblepharon-ectropion-hypertelorism-macrostomia syndrome","type":"exact"},{"name":"mandibulofacial dysostosis with macroblepharon and macrostomia","type":"related"}],"termid":"MONDO:0011255","xrefs":{"Monarch":{"xref_id":"0011255"}}}


id: GO:1903977
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of glial cell migration.","definition_xrefs":["GOC:BHF","GOC:nc","PMID:19100238","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell migration","termid":"GO:0030335"},{"relation_name":"is_a","term_name":"regulation of glial cell migration","termid":"GO:1903975"},{"relation_name":"positively_regulates","term_name":"glial cell migration","termid":"GO:0008347"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of glial cell migration","synonyms":[{"name":"activation of glia cell migration","type":"narrow"},{"name":"activation of glial cell migration","type":"narrow"},{"name":"positive regulation of glia cell migration","type":"exact"},{"name":"up regulation of glia cell migration","type":"exact"},{"name":"up regulation of glial cell migration","type":"exact"},{"name":"up-regulation of glia cell migration","type":"exact"},{"name":"up-regulation of glial cell migration","type":"exact"},{"name":"upregulation of glia cell migration","type":"exact"},{"name":"upregulation of glial cell migration","type":"exact"}],"termid":"GO:1903977"}


id: MONDO:0015160
data:
  {"annotated_genes":["SJAG_02394","SJAG_02074","SJAG_01521","SJAG_01267","SJAG_02607","SJAG_00112","SJAG_01354","SJAG_03396","SJAG_01181","SJAG_02317","SJAG_03927","SJAG_00327","SJAG_04270","SJAG_02279","SJAG_02923","SJAG_03453","SJAG_02536","SJAG_03126","SJAG_02399","SJAG_05245","SJAG_02342","SJAG_00993"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85979],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008726"},{"annotations":[85455],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0020667"},{"annotations":[85871],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007301"},{"annotations":[86222],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009143"},{"annotations":[87263],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013428"},{"annotations":[87265],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013430"},{"annotations":[87264],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013431"},{"annotations":[87266],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013432"},{"annotations":[86500],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014894"},{"annotations":[85782],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0033046"},{"annotations":[85892],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054593"},{"annotations":[87624,87625,87626],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008104"},{"annotations":[86144],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0033669"},{"annotations":[87014],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012371"},{"annotations":[86811],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013186"},{"annotations":[85882,85883],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054588"},{"annotations":[87458],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010572"},{"annotations":[87619],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0800042"},{"annotations":[85608],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0044634"},{"annotations":[85997],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014848"},{"annotations":[87497],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008644"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome","termid":"MONDO:0019042"}],"gene_count":22,"genes_by_uniquename":{"SJAG_00112":null,"SJAG_00327":null,"SJAG_00993":null,"SJAG_01181":null,"SJAG_01267":null,"SJAG_01354":null,"SJAG_01521":null,"SJAG_02074":null,"SJAG_02279":null,"SJAG_02317":null,"SJAG_02342":null,"SJAG_02394":null,"SJAG_02399":null,"SJAG_02536":null,"SJAG_02607":null,"SJAG_02923":null,"SJAG_03126":null,"SJAG_03396":null,"SJAG_03453":null,"SJAG_03927":null,"SJAG_04270":null,"SJAG_05245":null},"genotype_count":0,"is_obsolete":false,"name":"multiple congenital anomalies/dysmorphic syndrome-variable intellectual disability syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["Orphanet:102284"],"synonyms":[{"name":"MCA/variable MR","type":"exact"},{"name":"multiple congenital anomalies-variable intellectual disability with or without dysmorphism syndrome","type":"exact"}],"termid":"MONDO:0015160","terms_by_termid":{"MONDO:0007301":null,"MONDO:0008104":null,"MONDO:0008644":null,"MONDO:0008726":null,"MONDO:0009143":null,"MONDO:0010572":null,"MONDO:0012371":null,"MONDO:0013186":null,"MONDO:0013428":null,"MONDO:0013430":null,"MONDO:0013431":null,"MONDO:0013432":null,"MONDO:0014848":null,"MONDO:0014894":null,"MONDO:0020667":null,"MONDO:0033046":null,"MONDO:0033669":null,"MONDO:0044634":null,"MONDO:0054588":null,"MONDO:0054593":null,"MONDO:0800042":null},"xrefs":{"Monarch":{"xref_id":"0015160"}}}


id: RO:0003303
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A relationship between an entity (e.g. a genotype, genetic variation, chemical, or environmental exposure) and a condition (a phenotype or disease), where the entity has some causal role for the condition.","direct_ancestors":[{"relation_name":"is_a","term_name":"causes_or_contributes_to_condition","termid":"RO:0003302"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"causes_condition","termid":"RO:0003303"}


id: GO:1900470
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of phosphatidylserine biosynthetic process.","definition_xrefs":["GOC:dgf","GOC:TermGenie","PMID:8614637","PMID:8056324"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of phospholipid biosynthetic process","termid":"GO:0071073"},{"relation_name":"is_a","term_name":"positive regulation of phosphatidylserine metabolic process","termid":"GO:0150179"},{"relation_name":"is_a","term_name":"regulation of phosphatidylserine biosynthetic process","termid":"GO:1900468"},{"relation_name":"positively_regulates","term_name":"phosphatidylserine biosynthetic process","termid":"GO:0006659"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"positively_regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"positive regulation of phosphatidylserine biosynthetic process","synonyms":[{"name":"activation of phosphatidylserine anabolism","type":"exact"},{"name":"activation of phosphatidylserine biosynthesis","type":"exact"},{"name":"activation of phosphatidylserine biosynthetic process","type":"narrow"},{"name":"activation of phosphatidylserine formation","type":"exact"},{"name":"activation of phosphatidylserine synthesis","type":"exact"},{"name":"positive regulation of phosphatidylserine anabolism","type":"exact"},{"name":"positive regulation of phosphatidylserine biosynthesis","type":"exact"},{"name":"positive regulation of phosphatidylserine formation","type":"exact"},{"name":"positive regulation of phosphatidylserine synthesis","type":"exact"},{"name":"up regulation of phosphatidylserine anabolism","type":"exact"},{"name":"up regulation of phosphatidylserine biosynthesis","type":"exact"},{"name":"up regulation of phosphatidylserine biosynthetic process","type":"exact"},{"name":"up regulation of phosphatidylserine formation","type":"exact"},{"name":"up regulation of phosphatidylserine synthesis","type":"exact"},{"name":"up-regulation of phosphatidylserine anabolism","type":"exact"},{"name":"up-regulation of phosphatidylserine biosynthesis","type":"exact"},{"name":"up-regulation of phosphatidylserine biosynthetic process","type":"exact"},{"name":"up-regulation of phosphatidylserine formation","type":"exact"},{"name":"up-regulation of phosphatidylserine synthesis","type":"exact"},{"name":"upregulation of phosphatidylserine anabolism","type":"exact"},{"name":"upregulation of phosphatidylserine biosynthesis","type":"exact"},{"name":"upregulation of phosphatidylserine biosynthetic process","type":"exact"},{"name":"upregulation of phosphatidylserine formation","type":"exact"},{"name":"upregulation of phosphatidylserine synthesis","type":"exact"}],"termid":"GO:1900470"}


id: PBO:0070176
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 90 pseudogene","termid":"PBO:0070176"}


id: GO:0019666
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The anaerobic chemical reactions and pathways resulting in the breakdown of a nitrogen-containing compound, yielding energy in the form of ATP.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fermentation","termid":"GO:0006113"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0008150","GO:0006091"],"is_obsolete":false,"name":"nitrogenous compound fermentation","synonyms":[{"name":"nitrogenous compound catabolic process","type":"broad"}],"termid":"GO:0019666"}


id: FYPO:0007950
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A biological process phenotype in which the observed mating efficiency, as determined by counting zygotes, asci, and sometimes spores, is higher than normal when a cell is subject to nitrogen stress.","definition_xrefs":["PomBase:val"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased mating efficiency","termid":"FYPO:0001043"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0001985"],"is_obsolete":false,"name":"increased mating efficency during nitrogen stress","termid":"FYPO:0007950"}


id: PBO:0074573
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA host gene 29","termid":"PBO:0074573"}


id: MOD:00087
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to N6-myristoyl-L-lysine.","definition_xrefs":["PubMed:1402651","Unimod:45#K","PubMed:8346241","OMSSA:81","RESID:AA0078"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-myristoylated residue","termid":"MOD:00650"},{"relation_name":"is_a","term_name":"N6-acylated L-lysine","termid":"MOD:01875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:01875"},{"rel_name":"is_a","termid":"MOD:01155"}],"interesting_parent_ids":["MOD:01875","MOD:01155"],"is_obsolete":false,"name":"N6-myristoyl-L-lysine","synonyms":[{"name":"(2S)-2-amino-6-(tetradecanoylamino)hexanoic acid","type":"exact"},{"name":"2-amino-6-(tetradecanamido)hexanoic acid","type":"exact"},{"name":"LIPID N6-myristoyl lysine","type":"exact"},{"name":"Myristoyl","type":"related"},{"name":"Myristoylation","type":"related"},{"name":"N(zeta)-myristoyllysine","type":"exact"},{"name":"N6-(1-oxotetradecyl)-L-lysine","type":"exact"},{"name":"N6-(C14:0 aliphatic acyl)lysine","type":"exact"},{"name":"N6-myristoyl-L-lysine","type":"exact"},{"name":"N6-myristoylated L-lysine","type":"exact"},{"name":"N6MyrLys","type":"exact"},{"name":"epsilon-myristoyllysine","type":"exact"},{"name":"myristoylationk","type":"exact"}],"termid":"MOD:00087"}


id: PATO:0000459
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000459 relative quantity value (obsolete PATO:0000459)","termid":"PATO:0000459"}


id: GO:0042421
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of norepinephrine, a hormone secreted by the adrenal medulla, and a neurotransmitter in the sympathetic peripheral nervous system and in some tracts in the central nervous system. It is also the demethylated biosynthetic precursor of epinephrine.","definition_xrefs":["GOC:jl","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"norepinephrine metabolic process","termid":"GO:0042415"},{"relation_name":"is_a","term_name":"catecholamine biosynthetic process","termid":"GO:0042423"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"norepinephrine biosynthetic process","synonyms":[{"name":"levarterenol biosynthesis","type":"exact"},{"name":"levarterenol biosynthetic process","type":"exact"},{"name":"noradrenaline biosynthesis","type":"exact"},{"name":"noradrenaline biosynthetic process","type":"exact"},{"name":"norepinephrine anabolism","type":"exact"},{"name":"norepinephrine biosynthesis","type":"exact"},{"name":"norepinephrine formation","type":"exact"},{"name":"norepinephrine synthesis","type":"exact"}],"termid":"GO:0042421"}


id: GO:0002213
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A response to protect an organism from a directly detected or perceived external threat from an insect or insects to that organism.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"defense response","termid":"GO:0006952"},{"relation_name":"is_a","term_name":"response to other organism","termid":"GO:0051707"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"defense response to insect","secondary_identifiers":["GO:0002214"],"synonyms":[{"name":"physiological defense response to insect","type":"exact"}],"termid":"GO:0002213"}


id: MONDO:0017514
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"split foot","termid":"MONDO:0017450"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"split foot, bilateral","secondary_identifiers":["Orphanet:295126","ICD10CM:Q72.73","MEDGEN:1757565","UMLS:C2910315","icd11.foundation:1227623929"],"termid":"MONDO:0017514","xrefs":{"Monarch":{"xref_id":"0017514"}}}


id: GO:1990632
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the branching structure of the submandibular gland is generated and organized.","definition_xrefs":["PMID:15063181","PMID:20890964"],"direct_ancestors":[{"relation_name":"is_a","term_name":"branching involved in salivary gland morphogenesis","termid":"GO:0060445"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"branching involved in submandibular gland morphogenesis","synonyms":[{"name":"submandibular gland branching morphogenesis","type":"exact"},{"name":"submandibular gland ductal branching","type":"exact"}],"termid":"GO:1990632"}


id: GO:0030322
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The accomplishment of a non-fluctuating membrane potential, the electric potential existing across any membrane arising from charges in the membrane itself and from the charges present in the media on either side of the membrane.","definition_xrefs":["GOC:jl","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of membrane potential","termid":"GO:0042391"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"stabilization of membrane potential","termid":"GO:0030322"}


id: GO:1903440
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex which is capable of amylin receptor activity.","definition_xrefs":["PMID:18687416","GO_REF:0000088","GOC:TermGenie","GOC:bhm","PMID:10871296","PMID:12037140"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calcitonin family receptor complex","termid":"GO:1903439"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005886"],"is_obsolete":false,"name":"amylin receptor complex","termid":"GO:1903440"}


id: MONDO:0100152
data:
  {"annotated_genes":["SJAG_04754"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86854],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010584"}]},"cv_name":"mondo","definition":"Any dyskeratosis congenita in which the cause of the disease is a mutation in the DKC1 gene.","definition_xrefs":["PMID:14648217","PMID:19633571","MONDO:patterns/disease_series_by_gene","PMID:12437656","PMID:10583221"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dyskeratosis congenita","termid":"MONDO:0015780"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04754":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"DKC1-related disorder","references_by_uniquename":{"PB_REF:0000006":null},"synonyms":[{"name":"DKC1-related disorder","type":"exact"}],"termid":"MONDO:0100152","terms_by_termid":{"MONDO:0010584":null},"xrefs":{"Monarch":{"xref_id":"0100152"}}}


id: MONDO:0005309
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Traumatic or pathological injury to the spine in which the continuity of a vertebral bone is broken. Symptoms include back pain and difficulty bending and twisting.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bone fracture","termid":"MONDO:0005315"},{"relation_name":"is_a","term_name":"spinal injury","termid":"MONDO:0037747"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spinal fracture","secondary_identifiers":["SCTID:50448004","EFO:0003902","MESH:D016103"],"synonyms":[{"name":"bone fracture of vertebral column","type":"exact"},{"name":"vertebral column bone fracture","type":"exact"}],"termid":"MONDO:0005309","xrefs":{"Monarch":{"xref_id":"0005309"}}}


id: PATO:0001493
data:
  {"annotation_feature_type":"gene","cv_name":"quality","direct_ancestors":[{"relation_name":"is_a","term_name":"growth rate","termid":"PATO:0001492"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypertrophic growth","termid":"PATO:0001493"}


id: MONDO:0007580
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete esterase ES-2, regulator for (obsolete MONDO:0007580)","secondary_identifiers":["OMIM:133300"],"synonyms":[{"name":"esterase ES-2, regulator for","type":"exact"}],"termid":"MONDO:0007580","xrefs":{"Monarch":{"xref_id":"0007580"}}}


id: PBO:0085610
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in directionality of mating type switching; acts with Fkh1p to control which donor mating-type locus is inserted into MAT locus during mating type switching; localized to the nucleus; not an essential gene","termid":"PBO:0085610"}


id: PATO:0000580
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000580 absolute weight value (obsolete PATO:0000580)","termid":"PATO:0000580"}


id: FYPO:0006985
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which heterochromatin is assembled over a larger region near the silent mating-type cassette than normal, such that it extends beyond the IRL boundary element.","definition_xrefs":["PMID:26518661","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased spatial extent of heterochromatin assembly","termid":"FYPO:0007953"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000641"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0000641","FYPO:0001320"],"is_obsolete":false,"name":"heterochromatin assembly beyond boundary element IRL","synonyms":[{"name":"heterochromatin assembly beyond boundary element IRL during mitotic cell cycle","type":"related"},{"name":"heterochromatin assembly beyond boundary element IRL during vegetative growth","type":"exact"},{"name":"heterochromatin formation beyond boundary element IRL","type":"exact"}],"termid":"FYPO:0006985"}


id: PBO:0067968
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 270","termid":"PBO:0067968"}


id: PBO:0061448
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear receptor subfamily 3 group C member 2","termid":"PBO:0061448"}


id: GO:0015232
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of heme from one side of a membrane to the other.","definition_xrefs":["PMID:29549126"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transporter activity","termid":"GO:0022857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"heme transmembrane transporter activity","secondary_identifiers":["Reactome:R-HSA-917892","Reactome:R-HSA-9661408","Reactome:R-HSA-917870"],"synonyms":[{"name":"haem transporter activity","type":"exact"},{"name":"heme transporter activity","type":"broad"}],"termid":"GO:0015232"}


id: PBO:0076108
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"syntaxin 16","termid":"PBO:0076108"}


id: PBO:0026766
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_ferric-chelate_reductase_activity","termid":"PBO:0026766"}


id: GO:0014803
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The region between the inner and outer lipid bilayers of the longitudinal sarcoplasmic reticulum envelope. The longitudinal sarcoplasmic reticulum lumen is continuous with the lumen contained within the terminal cisternae.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sarcoplasmic reticulum lumen","termid":"GO:0033018"},{"relation_name":"part_of","term_name":"longitudinal sarcoplasmic reticulum","termid":"GO:0014801"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005783"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005783","GO:0005575"],"is_obsolete":false,"name":"longitudinal sarcoplasmic reticulum lumen","termid":"GO:0014803"}


id: PBO:0059897
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND1 pseudogene 20","termid":"PBO:0059897"}


id: PBO:0065581
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein tyrosine kinase 2 beta","termid":"PBO:0065581"}


id: MONDO:0859689
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"benign digestive system neoplasm","termid":"MONDO:0000385"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"hepatobiliary benign neoplasm","secondary_identifiers":["DOID:3117"],"termid":"MONDO:0859689","xrefs":{"Monarch":{"xref_id":"0859689"}}}


id: PR:O94633
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- dpm3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94633"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dolichol-phosphate mannosyltransferase subunit 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1677.02","synonyms":[{"name":"DPM synthase complex subunit 3 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"MPD synthase subunit 3 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-dpm3","type":"exact"},{"name":"dolichol-phosphate mannose synthase subunit 3 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"dolichyl-phosphate beta-D-mannosyltransferase subunit 3 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"mannose-P-dolichol synthase subunit 3 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94633"}


id: GO:0051137
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of natural killer T cell differentiation.","definition_xrefs":["PMID:12154375","PMID:9133426","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of alpha-beta T cell differentiation","termid":"GO:0046639"},{"relation_name":"is_a","term_name":"regulation of NK T cell differentiation","termid":"GO:0051136"},{"relation_name":"negatively_regulates","term_name":"NK T cell differentiation","termid":"GO:0001865"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"negative regulation of NK T cell differentiation","synonyms":[{"name":"down regulation of NK T cell differentiation","type":"exact"},{"name":"down-regulation of NK T cell differentiation","type":"exact"},{"name":"downregulation of NK T cell differentiation","type":"exact"},{"name":"inhibition of NK T cell differentiation","type":"narrow"},{"name":"negative regulation of NK T cell development","type":"related"},{"name":"negative regulation of NK T lymphocyte differentiation","type":"exact"},{"name":"negative regulation of NK T-cell differentiation","type":"exact"},{"name":"negative regulation of NK T-lymphocyte differentiation","type":"exact"},{"name":"negative regulation of NKT cell differentiation","type":"exact"},{"name":"negative regulation of NT cell differentiation","type":"exact"},{"name":"negative regulation of natural T cell differentiation","type":"exact"},{"name":"negative regulation of natural killer T cell differentiation","type":"exact"}],"termid":"GO:0051137"}


