# terms

id: PBO:0062248
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily BN member 2 pseudogene","termid":"PBO:0062248"}


id: MOD:01649
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively removes or replaces an L-tyrosine.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-tyrosine residue","termid":"MOD:00919"},{"relation_name":"is_a","term_name":"natural, standard, encoded residue removal","termid":"MOD:01651"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-tyrosine removal","termid":"MOD:01649"}


id: MONDO:1010061
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hyperaldosteronism that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endocrine system disorder, non-human animal","termid":"MONDO:1011317"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyperaldosteronism, non-human animal","secondary_identifiers":["OMIA:001269"],"termid":"MONDO:1010061","xrefs":{"Monarch":{"xref_id":"1010061"}}}


id: MONDO:0000693
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A bipolar disorder that is characterized by at least one hypomanic episode and at least one major depressive episode; with this disorder, depressive episodes are more frequent and more intense than manic episodes.","definition_xrefs":["DOID:0060166"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bipolar disorder","termid":"MONDO:0004985"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bipolar II disorder","secondary_identifiers":["MEDGEN:536634","ICD9:296.89","UMLS:C0236788","SCTID:83225003"],"synonyms":[{"name":"bipolar 2 disorder","type":"related"},{"name":"bipolar II disorder","type":"exact"},{"name":"bipolar ll disorder","type":"related"}],"termid":"MONDO:0000693","xrefs":{"Monarch":{"xref_id":"0000693"}}}


id: MONDO:0045053
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign, intermediate, or malignant bone-forming neoplasm. Representative examples include osteoma, osteoblastoma, and osteosarcoma.","definition_xrefs":["NCIT:C6603"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesenchymal cell neoplasm","termid":"MONDO:0002616"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"osteogenic neoplasm","secondary_identifiers":["UMLS:C1335146","MEDGEN:277453"],"synonyms":[{"name":"osseous neoplasm","type":"related"},{"name":"osseous tumor","type":"related"},{"name":"osseous tumour","type":"related"},{"name":"osteogenic neoplasm","type":"exact"},{"name":"osteogenic tumor","type":"exact"},{"name":"osteogenic tumour","type":"exact"}],"termid":"MONDO:0045053","xrefs":{"Monarch":{"xref_id":"0045053"}}}


id: GO:0001575
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving globosides, globotetraosylceramides, ceramides containing a core structure of GalNAc-beta-(1->3)-Gal-alpha-(1->4)-Glc(I). Globosides are the major neutral glycosphingolipid in normal kidneys and erythrocytes.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycosphingolipid metabolic process","termid":"GO:0006687"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"globoside metabolic process","synonyms":[{"name":"globoside metabolism","type":"exact"}],"termid":"GO:0001575"}


id: PBO:0069170
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 422, pseudogene","termid":"PBO:0069170"}


id: MONDO:1010598
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hypoparathyroidism that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypoparathyroidism, non-human animal","termid":"MONDO:1010056"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypoparathyroidism, dog","secondary_identifiers":["OMIA:000528-9615"],"termid":"MONDO:1010598","xrefs":{"Monarch":{"xref_id":"1010598"}}}


id: FYECO:0000125
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Cells were grown to exponential phase.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping growth timing","termid":"FYECO:0000122"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"growth to exponential phase","termid":"FYECO:0000125"}


id: MONDO:0002480
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign, borderline, or malignant epithelial tumor of the female reproductive system characterized by the presence of glands and/or cysts lined by neoplastic cells that resemble endometrial cells.","definition_xrefs":["NCIT:C7113"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"female reproductive organ cancer","termid":"MONDO:0001416"},{"relation_name":"is_a","term_name":"epithelial neoplasm","termid":"MONDO:0005626"},{"relation_name":"is_a","term_name":"female reproductive system neoplasm","termid":"MONDO:0021148"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endometrioid tumor","secondary_identifiers":["DOID:3001","MEDGEN:105374","UMLS:C0474809"],"synonyms":[{"name":"endometrioid neoplasm","type":"exact"},{"name":"endometrioid neoplasm of female reproductive system","type":"exact"},{"name":"endometrioid neoplasm of the female reproductive system","type":"exact"},{"name":"endometrioid tumor","type":"exact"},{"name":"endometrioid tumor (morphologic abnormality)","type":"exact"},{"name":"endometrioid tumor of female reproductive system","type":"exact"},{"name":"endometrioid tumor of the female reproductive system","type":"exact"},{"name":"endometrioid tumour (morphologic abnormality)","type":"exact"},{"name":"endometrioid tumour of female reproductive system","type":"exact"},{"name":"endometrioid tumour of the female reproductive system","type":"exact"},{"name":"female reproductive endometrioid cancer","type":"related"},{"name":"female reproductive endometrioid neoplasm","type":"exact"},{"name":"female reproductive endometrioid tumor","type":"exact"},{"name":"female reproductive endometrioid tumour","type":"exact"}],"termid":"MONDO:0002480","xrefs":{"Monarch":{"xref_id":"0002480"}}}


id: GO:1900200
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any mesenchymal cell apoptotic process that is involved in metanephros development.","definition_xrefs":["GOC:mtg_apoptosis","PMID:17314325","GOC:mtg_kidney_jan10","GOC:yaf","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesenchymal cell apoptotic process","termid":"GO:0097152"},{"relation_name":"is_a","term_name":"apoptotic process involved in development","termid":"GO:1902742"},{"relation_name":"part_of","term_name":"metanephros development","termid":"GO:0001656"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesenchymal cell apoptotic process involved in metanephros development","synonyms":[{"name":"mesenchymal cell apoptosis involved in metanephros development","type":"narrow"}],"termid":"GO:1900200"}


id: PBO:0117437
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial Mpv17/PMP22 family protein, implicated in transmembrane trasnsport or organelle fission","termid":"PBO:0117437"}


id: PBO:0059439
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"membrane spanning 4-domains A8","termid":"PBO:0059439"}


id: MONDO:0006722
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A condition that results from excessive fluoride ingestion during tooth development, resulting in tooth discoloration ranging from white streaks to brown stains and cracks or pits in the tooth enamel.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tooth disorder","termid":"MONDO:0006999"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dental fluorosis","secondary_identifiers":["NCIT:C85059","ICD9:520.3","ICD10CM:K00.3","MedDRA:10016819","MESH:D009050","SCTID:30265004","EFO:1000892","MEDGEN:44506","DOID:13711","UMLS:C0026618"],"synonyms":[{"name":"fluorosis","type":"exact"},{"name":"intrinsic enamel discolouration of fluorosis","type":"exact"},{"name":"mottled teeth","type":"exact"},{"name":"mottling of enamel","type":"exact"}],"termid":"MONDO:0006722","xrefs":{"Monarch":{"xref_id":"0006722"}}}


id: SO:0001431
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that is not transcribed under normal conditions and is not critical to normal cellular functioning.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"cryptic","termid":"SO:0000976"},{"relation_name":"is_a","term_name":"gene","termid":"SO:0000704"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cryptic_gene","synonyms":[{"name":"cryptic gene","type":"exact"}],"termid":"SO:0001431"}


id: GO:1905476
data:
  {"annotated_genes":["SJAG_02392","SJAG_03970","SJAG_04597"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88447],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042997"},{"annotations":[94772],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140325"},{"annotations":[96215],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903077"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of protein localization to membrane.","definition_xrefs":["GO_REF:0000058","GOC:PARL","GOC:TermGenie","PMID:26911690","GOC:bc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein localization","termid":"GO:1903828"},{"relation_name":"is_a","term_name":"regulation of protein localization to membrane","termid":"GO:1905475"},{"relation_name":"negatively_regulates","term_name":"protein localization to membrane","termid":"GO:0072657"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02392":null,"SJAG_03970":null,"SJAG_04597":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of protein localization to membrane","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of protein localisation in membrane","type":"exact"},{"name":"down regulation of protein localization in membrane","type":"exact"},{"name":"down regulation of protein localization to membrane","type":"exact"},{"name":"down-regulation of protein localisation in membrane","type":"exact"},{"name":"down-regulation of protein localization in membrane","type":"exact"},{"name":"down-regulation of protein localization to membrane","type":"exact"},{"name":"downregulation of protein localisation in membrane","type":"exact"},{"name":"downregulation of protein localization in membrane","type":"exact"},{"name":"downregulation of protein localization to membrane","type":"exact"},{"name":"inhibition of protein localisation in membrane","type":"narrow"},{"name":"inhibition of protein localization in membrane","type":"narrow"},{"name":"inhibition of protein localization to membrane","type":"narrow"},{"name":"negative regulation of protein localisation in membrane","type":"exact"},{"name":"negative regulation of protein localization in membrane","type":"exact"}],"termid":"GO:1905476","terms_by_termid":{"GO:0042997":null,"GO:0140325":null,"GO:1903077":null}}


id: GO:0045609
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of auditory hair cell differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of epidermal cell differentiation","termid":"GO:0045606"},{"relation_name":"is_a","term_name":"regulation of inner ear auditory receptor cell differentiation","termid":"GO:0045607"},{"relation_name":"is_a","term_name":"positive regulation of inner ear receptor cell differentiation","termid":"GO:2000982"},{"relation_name":"positively_regulates","term_name":"inner ear auditory receptor cell differentiation","termid":"GO:0042491"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of inner ear auditory receptor cell differentiation","synonyms":[{"name":"activation of auditory receptor cell differentiation","type":"narrow"},{"name":"positive regulation of auditory hair cell differentiation","type":"exact"},{"name":"positive regulation of auditory receptor cell differentiation","type":"related"},{"name":"stimulation of auditory receptor cell differentiation","type":"narrow"},{"name":"up regulation of auditory receptor cell differentiation","type":"exact"},{"name":"up-regulation of auditory receptor cell differentiation","type":"exact"},{"name":"upregulation of auditory receptor cell differentiation","type":"exact"}],"termid":"GO:0045609"}


id: MONDO:0030378
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autosomal recessive disorder characterized by hypomyelination, microcephaly, liver dysfunction, and recurrent hypomyelination.","definition_xrefs":["OMIM:619423"],"direct_ancestors":[{"relation_name":"is_a","term_name":"combined oxidative phosphorylation deficiency","termid":"MONDO:0000732"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004069"],"is_obsolete":false,"name":"combined oxidative phosphorylation deficiency 53","secondary_identifiers":["DOID:0070426","UMLS:C5543631","MEDGEN:1779083"],"synonyms":[{"name":"COXPD53","type":"exact"},{"name":"combined oxidative phosphorylation deficiency due to C2orf69 deficiency","type":"exact"}],"termid":"MONDO:0030378","xrefs":{"Monarch":{"xref_id":"0030378"}}}


id: MONDO:0020074
data:
  {"annotated_genes":["SJAG_04513"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86399],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013526"}]},"cv_name":"mondo","definition":"A rare group of disorders characterized by the development of myoclonic and tonic-clonic epileptic seizures associated with progressive degeneration of the nervous system.","definition_xrefs":["NCIT:C7636"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"childhood-onset epilepsy syndrome","termid":"MONDO:0020072"},{"relation_name":"excluded_subClassOf","term_name":"obsolete adolescent-onset epilepsy syndrome (obsolete MONDO:0020073)","termid":"MONDO:0020073"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"},{"relation_name":"is_a","term_name":"myoclonic epilepsy","termid":"MONDO:0100577"},{"relation_name":"is_a","term_name":"variable-age epilepsy syndrome with developmental and/or epileptic encephalopathy or progressive neurological deterioration","termid":"MONDO:0800495"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04513":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"progressive myoclonus epilepsy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIMPS:254800","Orphanet:98261","NANDO:1200953","SCTID:267581004","UMLS:C0751778","GARD:7140","NANDO:2100237","MEDGEN:199732","icd11.foundation:173613583","MESH:D020191","DOID:891","NORD:1617"],"synonyms":[{"name":"PME","type":"exact"},{"name":"epilepsy, progressive myoclonic","type":"exact"},{"name":"familial progressive myoclonic epilepsy","type":"related"},{"name":"progressive myoclonic epilepsy","type":"exact"},{"name":"progressive myoclonic epilepsy (disorder) [ambiguous]","type":"exact"},{"name":"progressive myoclonus epilepsy","type":"exact"}],"termid":"MONDO:0020074","terms_by_termid":{"MONDO:0013526":null},"xrefs":{"Monarch":{"xref_id":"0020074"}}}


id: PBO:0090635
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial cardiolipin-specific phospholipase Cld1","termid":"PBO:0090635"}


id: MONDO:1012959
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Herediatary ataxia that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"atactic disorder, non-human animal","termid":"MONDO:1012958"},{"relation_name":"is_a","term_name":"hereditary neurological disease, non-human animal","termid":"MONDO:1012972"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hereditary ataxia, non-human animal","termid":"MONDO:1012959","xrefs":{"Monarch":{"xref_id":"1012959"}}}


id: PBO:0045671
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein cytoplasmic 1 intermediate chain 2","termid":"PBO:0045671"}


id: PBO:0091807
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. japonicus rsv1","termid":"PBO:0091807"}


id: PBO:0000201
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.6.1.52","termid":"PBO:0000201"}


id: PBO:0088671
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AP-2 adaptor complex mu subunit Apm4","termid":"PBO:0088671"}


id: PBO:0090643
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein tyrosine phosphatase (M phase inducer) Cdc25","termid":"PBO:0090643"}


id: GO:0010673
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that increases the frequency, rate or extent of transcription from an RNA polymerase II promoter as part of the meiotic cell cycle.","definition_xrefs":["GOC:dph","GOC:tb","PMID:8618927"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transcription from RNA polymerase II promoter involved in meiotic cell cycle (obsolete GO:0010673)","synonyms":[{"name":"activation of meiosis by positive regulation of transcription from RNA polymerase II promoter","type":"narrow"},{"name":"positive regulation of meiosis by positive regulation of transcription from RNA polymerase II promoter","type":"narrow"},{"name":"positive regulation of transcription from RNA polymerase II promoter, meiotic","type":"exact"},{"name":"stimulation of meiosis by positive regulation of transcription from RNA polymerase II promoter","type":"narrow"},{"name":"up regulation of meiosis by positive regulation of transcription from RNA polymerase II promoter","type":"narrow"},{"name":"up-regulation of meiosis by positive regulation of transcription from RNA polymerase II promoter","type":"narrow"},{"name":"upregulation of meiosis by positive regulation of transcription from RNA polymerase II promoter","type":"narrow"}],"termid":"GO:0010673"}


id: GO:0060649
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the mammary gland bud grows along its axis.","definition_xrefs":["GOC:dph","PMID:12558599"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental growth involved in morphogenesis","termid":"GO:0060560"},{"relation_name":"part_of","term_name":"mammary gland bud morphogenesis","termid":"GO:0060648"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mammary gland bud elongation","termid":"GO:0060649"}


id: GO:0044214
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the plasma membrane consisting of gene products and protein complexes that have some part that spans both leaflets of the membrane.","definition_xrefs":["GOC:ecd"],"gene_count":0,"genotype_count":0,"name":"obsolete spanning component of plasma membrane (obsolete GO:0044214)","synonyms":[{"name":"fully spanning plasma membrane","type":"exact"},{"name":"transmembrane","type":"related"}],"termid":"GO:0044214"}


id: PBO:0049566
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2B histone pseudogene 2","termid":"PBO:0049566"}


id: GO:0018007
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The glucuronylation of the N-terminal glycine of proteins to form the derivative D-glucuronyl-N-glycine.","definition_xrefs":["RESID:AA0058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-terminal protein amino acid glucuronylation","termid":"GO:0018006"},{"relation_name":"is_a","term_name":"peptidyl-glycine modification","termid":"GO:0018201"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006486"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006486","GO:0008150"],"is_obsolete":false,"name":"N-terminal peptidyl-glycine N-glucuronylation","termid":"GO:0018007"}


id: MONDO:0005266
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A chronic, pathological complication associated with diabetes mellitus, where retinal damages are incurred due to microaneurysms in the vasculature of the retina, progressively leading to abnormal blood vessel growth, and swelling and leaking of fluid from blood vessels, resulting in vision loss or blindness.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinal vascular disorder","termid":"MONDO:0002311"},{"relation_name":"is_a","term_name":"metabolic disease","termid":"MONDO:0005066"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0005066"],"is_obsolete":false,"name":"diabetic retinopathy","secondary_identifiers":["MESH:D003930","icd11.foundation:1006882070","SCTID:4855003","NCIT:C34538","EFO:0003770","ICD9:362.0","DOID:8947","UMLS:C0011884","MEDGEN:3786"],"synonyms":[{"name":"retinal abnormality - diabetes-related","type":"exact"}],"termid":"MONDO:0005266","xrefs":{"Monarch":{"xref_id":"0005266"}}}


id: PBO:0045823
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 alpha 1 pseudogene 13","termid":"PBO:0045823"}


id: PBO:0027623
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormally_arrested_meiosis_I_with_four_spindle_pole_bodies","termid":"PBO:0027623"}


id: MONDO:0019816
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete anomaly of the tricuspid subvalvular apparatus (obsolete MONDO:0019816)","secondary_identifiers":["Orphanet:95463"],"termid":"MONDO:0019816","xrefs":{"Monarch":{"xref_id":"0019816"}}}


id: GO:0043866
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: AMP + sulfite + thioredoxin disulfide = 5'-adenylyl sulfate + thioredoxin.","definition_xrefs":["EC:1.8.4.10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor","termid":"GO:0016671"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"adenylyl-sulfate reductase (thioredoxin) activity","secondary_identifiers":["RHEA:21976"],"synonyms":[{"name":"AMP, sulfite:thioredoxin-disulfide oxidoreductase (adenosine-5'-phosphosulfate-forming)","type":"exact"},{"name":"AMP,sulfite:thioredoxin-disulfide oxidoreductase (adenosine-5'-phosphosulfate-forming)","type":"related"},{"name":"thioredoxin-dependent 5'-adenylylsulfate reductase activity","type":"exact"}],"termid":"GO:0043866"}


id: MONDO:0030087
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"permanent neonatal diabetes mellitus","termid":"MONDO:0100164"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005015"},{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0019254"}],"interesting_parent_ids":["MONDO:0037792","MONDO:0004335","MONDO:0019254","MONDO:0005066","MONDO:0005015"],"is_obsolete":false,"name":"diabetes mellitus, permanent neonatal 2","secondary_identifiers":["MEDGEN:1713823","UMLS:C5394296","GARD:16388","OMIM:618856"],"synonyms":[{"name":"DIABETES MELLITUS, PERMANENT NEONATAL 2","type":"exact"},{"name":"Developmental Delay, Epilepsy, and Neonatal Diabetes 1","type":"exact"},{"name":"PNDM2","type":"exact"},{"name":"diabetes mellitus, permanent neonatal 2","type":"exact"},{"name":"diabetes, permanent neonatal 2, with or without neurologic features","type":"exact"}],"termid":"MONDO:0030087","xrefs":{"Monarch":{"xref_id":"0030087"}}}


id: GO:0015174
data:
  {"annotated_genes":["SJAG_04637","SJAG_03400","SJAG_00051","SJAG_04725","SJAG_00877","SJAG_03256","SJAG_04787","SJAG_02029"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[90760,94957,96063],"is_not":false,"summary":null,"term":"GO:0015174"},{"annotations":[100726,79486,97713],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061459"},{"annotations":[97714,79479],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005290"},{"annotations":[103168,110410,100727,79483,97715],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015189"}]},"cv_name":"molecular_function","definition":"Enables the transfer of basic amino acids from one side of a membrane to the other. Basic amino acids have side chains with a positive charge at pH 7.3.","definition_xrefs":["ISBN:0815340729","GOC:mtg_transport","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid transmembrane transporter activity","termid":"GO:0015171"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00051":null,"SJAG_00877":null,"SJAG_02029":null,"SJAG_03256":null,"SJAG_03400":null,"SJAG_04637":null,"SJAG_04725":null,"SJAG_04787":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"basic amino acid transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0005286","Reactome:R-HSA-8932851","GO:0015326","Reactome:R-HSA-8959781"],"synonyms":[{"name":"basic amino acid permease activity","type":"exact"},{"name":"basic amino acid transporter activity","type":"broad"},{"name":"cationic amino acid transmembrane transporter activity","type":"related"}],"termid":"GO:0015174","terms_by_termid":{"GO:0005290":null,"GO:0015174":null,"GO:0015189":null,"GO:0061459":null}}


id: PBO:0046881
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 8 member A6, pseudogene","termid":"PBO:0046881"}


id: PBO:0002953
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"developmental disorders","termid":"PBO:0002953"}


id: MONDO:0958000
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited thrombocytopenia","termid":"MONDO:0100241"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"thrombocytopenia 11 with multiple congenital anomalies and dysmorphic facies","secondary_identifiers":["OMIM:620654","MEDGEN:1846947","UMLS:C5882734"],"termid":"MONDO:0958000","xrefs":{"Monarch":{"xref_id":"0958000"}}}


id: PBO:0044590
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"developing brain homeobox 1","termid":"PBO:0044590"}


id: GO:0034487
data:
  {"annotated_genes":["SJAG_00051"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90757],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034488"}]},"cv_name":"biological_process","definition":"The process in which an amino acid is transported from one side of the vacuolar membrane to the other.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid transmembrane transport","termid":"GO:0003333"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00051":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"vacuolar amino acid transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"vacuolar amino acid membrane transport","type":"exact"}],"termid":"GO:0034487","terms_by_termid":{"GO:0034488":null}}


id: GO:0019056
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which a virus modulates the frequency, rate or extent of its host's transcription.","definition_xrefs":["PMID:7799962"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by virus of host transcription (obsolete GO:0019056)","synonyms":[{"name":"modification of host transcription","type":"exact"},{"name":"modulation by virus of host transcription","type":"narrow"},{"name":"perturbation of host cell transcription","type":"exact"}],"termid":"GO:0019056"}


id: FYPO:0007692
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the activity of a DNA strand exchange activator is increased.","definition_xrefs":["PMID:33493431","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic activity regulator phenotype","termid":"FYPO:0007690"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000652"],"is_obsolete":false,"name":"increased DNA strand exchange activator activity","synonyms":[{"name":"increased RecA-family recombinase activator activity","type":"exact"},{"name":"increased positive regulation of RecA-family recombinase activity","type":"related"}],"termid":"FYPO:0007692"}


id: PBO:0038306
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein_level","termid":"PBO:0038306"}


id: PBO:0075449
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spermatogenesis associated 2 pseudogene 1","termid":"PBO:0075449"}


id: PBO:0068102
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 409","termid":"PBO:0068102"}


id: PBO:0072986
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"scinderin","termid":"PBO:0072986"}


id: GO:0042596
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The response of an organism to a perceived external threat.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal response to stress","termid":"GO:0033555"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"fear response","secondary_identifiers":["GO:0001663"],"synonyms":[{"name":"physiological fear response","type":"exact"}],"termid":"GO:0042596"}


id: PBO:0060398
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NEDD4 binding protein 2 like 2","termid":"PBO:0060398"}


id: MONDO:1012345
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"comedo syndrome, non-human animal","termid":"MONDO:1011745"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"comedo syndrome, dog","secondary_identifiers":["OMIA:001272-9615"],"termid":"MONDO:1012345","xrefs":{"Monarch":{"xref_id":"1012345"}}}


id: PBO:0078361
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Glu (anticodon TTC) 6-1","termid":"PBO:0078361"}


id: PBO:0091272
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF4210 domain protein, human FAM214A ortholog, implicated in chromosome segregation","termid":"PBO:0091272"}


id: GO:0032145
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to succinate-semialdehyde dehydrogenase.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme binding","termid":"GO:0019899"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"succinate-semialdehyde dehydrogenase binding","synonyms":[{"name":"succinic semialdehyde dehydrogenase binding","type":"exact"}],"termid":"GO:0032145"}


id: GO:0003096
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of sodium ions (Na+) by the renal system.","definition_xrefs":["GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal system process","termid":"GO:0003014"},{"relation_name":"is_a","term_name":"sodium ion transport","termid":"GO:0006814"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"renal sodium ion transport","termid":"GO:0003096"}


id: GO:1990111
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A proteasome specifically found in mammalian testis. Contains the proteasome activator PA200 in the regulatory particle, and beta1i, beta2i, beta5i and/or alpha4s in the core (20S) subunit. Beta1i, beta2i and beta5i are inducible catalytic subunits, closely related to beta1, beta2 and beta5. Alpha4s is a sperm-specific 20S subunit, but unlike other alternative 20S subunits alpha4s lies in the outer alpha-ring and lacks catalytic activity.","definition_xrefs":["PMID:23706739","GOC:sp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proteasome complex","termid":"GO:0000502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"spermatoproteasome complex","termid":"GO:1990111"}


id: GO:0097751
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of generating a spore-bearing structure. A spore-bearing structure is an anatomical structure that produces new spores.","definition_xrefs":["GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process","termid":"GO:0032502"},{"relation_name":"part_of","term_name":"spore-bearing structure development","termid":"GO:0075259"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"spore-bearing structure formation","synonyms":[{"name":"sporangium formation","type":"broad"},{"name":"sporophore formation","type":"exact"}],"termid":"GO:0097751"}


id: PBO:0000338
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae MAC1","termid":"PBO:0000338"}


id: PBO:0048405
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GAS8 antisense RNA 1","termid":"PBO:0048405"}


id: PBO:0067383
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 487, pseudogene","termid":"PBO:0067383"}


id: MONDO:0007376
data:
  {"annotated_genes":["SJAG_00638"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86769],"is_not":false,"summary":null,"term":"MONDO:0007376"}]},"cv_name":"mondo","definition":"Fleck corneal dystrophy (FCD) is a rare generally asymptomatic form of stromal corneal dystrophy characterized by multiple asymptomatic, non-progressive opacities disseminated throughout the corneal stroma with no effect on visual acuity.","definition_xrefs":["Orphanet:98970"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"stromal corneal dystrophy","termid":"MONDO:0020213"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00638":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"fleck corneal dystrophy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0060448","MESH:C563256","SCTID:417183007","icd11.foundation:607143324","ICD9:371.56","MEDGEN:287065","GARD:16879","OMIM:121850","UMLS:C1562113"],"synonyms":[{"name":"Cfd","type":"related"},{"name":"FCD","type":"exact"},{"name":"FranC'ois-Neetens speckled corneal dystrophy","type":"exact"},{"name":"Francois-Neetens speckled corneal dystrophy","type":"exact"},{"name":"François-Neetens speckled corneal dystrophy","type":"exact"},{"name":"corneal dystrophy, FLECK","type":"related"},{"name":"corneal dystrophy, Francois-Neetens speckled or flecked","type":"related"},{"name":"corneal fleck dystrophy","type":"exact"},{"name":"fleck corneal dystrophy","type":"exact"}],"termid":"MONDO:0007376","terms_by_termid":{"MONDO:0007376":null},"xrefs":{"Monarch":{"xref_id":"0007376"}}}


id: PBO:0089031
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial pyruvate dehydrogenase (lipoamide) kinase Pkp1","termid":"PBO:0089031"}


id: PBO:0088234
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin-like protein","termid":"PBO:0088234"}


id: PBO:0000398
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TIM23 translocase complex subunit Tim15 (predicted)","termid":"PBO:0000398"}


id: GO:0032658
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of interleukin-15 production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokine production","termid":"GO:0001817"},{"relation_name":"regulates","term_name":"interleukin-15 production","termid":"GO:0032618"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of interleukin-15 production","secondary_identifiers":["GO:0045372"],"synonyms":[{"name":"regulation of IL-15 production","type":"exact"},{"name":"regulation of interleukin-15 biosynthetic process","type":"narrow"}],"termid":"GO:0032658"}


id: GO:0090349
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of the chemical reactions and pathways involving organohalogen compounds, as carried out by individual cells.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of metabolic process","termid":"GO:0009892"},{"relation_name":"is_a","term_name":"regulation of organohalogen metabolic process","termid":"GO:0090347"},{"relation_name":"negatively_regulates","term_name":"organohalogen metabolic process","termid":"GO:0090345"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of organohalogen metabolic process","termid":"GO:0090349"}


id: PBO:0066469
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"replication factor C 5 pseudogene 1","termid":"PBO:0066469"}


id: PBO:0042437
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDC42 intronic transcript 1","termid":"PBO:0042437"}


id: PBO:0090558
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EKC/KEOPS complex N(6)-L-threonylcarbamoyladenine synthase subunit","termid":"PBO:0090558"}


id: PBO:0047995
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FSHD region gene 2 family member L, pseudogene","termid":"PBO:0047995"}


id: MONDO:0006410
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A proliferation of endometrial cells resulting in glandular enlargement and budding without changes in the basic structure of the endometrium. Epithelial atypia may be present or absent.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hyperplasia","termid":"MONDO:0005043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"simple endometrial hyperplasia","secondary_identifiers":["EFO:1000525","MEDGEN:96819","SCTID:198324001","UMLS:C0456483","ICD9:621.31","NCIT:C35463"],"termid":"MONDO:0006410","xrefs":{"Monarch":{"xref_id":"0006410"}}}


id: PBO:0035880
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H3-K9_methylation_at_centromere_outer_repeat_during_vegetative_growth","termid":"PBO:0035880"}


id: GO:0072143
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a mesangial cell in the kidney over time, from its formation to the mature structure.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell development","termid":"GO:0048468"},{"relation_name":"part_of","term_name":"mesangial cell differentiation","termid":"GO:0072007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesangial cell development","termid":"GO:0072143"}


id: PBO:0034618
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-meiosis_II_metaphase/anaphase_transition_delay","termid":"PBO:0034618"}


id: SO:0001428
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence assembly derived from expressed sequences.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sequence_assembly","termid":"SO:0000353"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"expressed_sequence_assembly","synonyms":[{"name":"expressed sequence assembly","type":"exact"}],"termid":"SO:0001428"}


id: GO:0061470
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized T cell acquires specialized features of a mature T follicular helper cell.","definition_xrefs":["PMID:21572431","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T-helper cell differentiation","termid":"GO:0042093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"T follicular helper cell differentiation","synonyms":[{"name":"T-helper follicular cell differentiation","type":"exact"}],"termid":"GO:0061470"}


id: PBO:0110399
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDGFD downstream neighbor","termid":"PBO:0110399"}


id: GO:0051332
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell cycle phase, following G1, during which DNA synthesis takes place as part of a meiotic cell cycle.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S phase","termid":"GO:0051320"},{"relation_name":"part_of","term_name":"meiotic interphase","termid":"GO:0051328"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0051328"}],"interesting_parent_ids":["GO:0008150","GO:0051328"],"is_obsolete":false,"name":"meiotic S phase","synonyms":[{"name":"S phase of meiotic cell cycle","type":"exact"},{"name":"S-phase of meiotic cell cycle","type":"exact"},{"name":"premeiotic S-phase","type":"exact"}],"termid":"GO:0051332"}


id: PBO:0058176
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4471","termid":"PBO:0058176"}


id: PBO:0090765
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"candidate S. pombe Mei3 ortholog, syntenic position, intrinsically disordered protein","termid":"PBO:0090765"}


id: PBO:0084617
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Metallothionein; binds copper and mediates resistance to high concentrations of copper and cadmium; locus is variably amplified in different strains, with two copies, CUP1-1 and CUP1-2, in the genomic sequence reference strain S288C; CUP1-1 has a paralog, CUP1-2, that arose from a segmental duplication","termid":"PBO:0084617"}


id: GO:0120123
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex responsible for the catalysis of the reaction: E1 + ubiquitin + ATP--> E1-ubiquitin + AMP + PPi, where the E1-ubiquitin linkage is a thioester bond between the C-terminal glycine of Ub and a sulfhydryl side group of an E1 cysteine residue. This is the first step in a cascade of reactions in which ubiquitin is ultimately added to a protein substrate.","definition_xrefs":["GOC:lnp","PMID:9545234"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"},{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"ubiquitin activating enzyme complex","synonyms":[{"name":"E1 complex","type":"exact"},{"name":"E1 ubiquitin-activating enzyme","type":"related"}],"termid":"GO:0120123"}


id: MONDO:0015008
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"amelogenesis imperfecta type 1","termid":"MONDO:0015047"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amelogenesis imperfecta, type 1J","secondary_identifiers":["DOID:0080953","OMIM:617297","MEDGEN:934597","EFO:0009302","GARD:16220","UMLS:C4310630"],"synonyms":[{"name":"AI1J","type":"related"},{"name":"amelogenesis imperfecta, type 1J","type":"exact"},{"name":"amelogenesis imperfecta, type Ij","type":"exact"}],"termid":"MONDO:0015008","xrefs":{"Monarch":{"xref_id":"0015008"}}}


id: GO:0051882
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the potential difference across the mitochondrial membrane is reduced from its steady state level.","definition_xrefs":["Wikipedia:Mitochondrion","Wikipedia:Depolarization"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mitochondrial membrane potential","termid":"GO:0051881"},{"relation_name":"is_a","term_name":"membrane depolarization","termid":"GO:0051899"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mitochondrial depolarization","synonyms":[{"name":"mitochondria depolarization","type":"exact"},{"name":"mitochondrial depolarisation","type":"exact"},{"name":"mitochondrial membrane depolarization","type":"exact"},{"name":"mitochondrion depolarization","type":"exact"}],"termid":"GO:0051882"}


id: PBO:0082573
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Chitin synthase I; requires activation from zymogenic form in order to catalyze the transfer of N-acetylglucosamine (GlcNAc) to chitin; required for repairing the chitin septum during cytokinesis; transcription activated by mating factor","termid":"PBO:0082573"}


id: MONDO:0850161
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A B-lymphoblastic leukemia/lymphoma that has a gene expression profile similar to that of B-ALL with t(9;22)(q34.1;q11.2) BCR-ABL1, but lacks that gene fusion.","definition_xrefs":["DOID:0080650"],"direct_ancestors":[{"relation_name":"is_a","term_name":"B-cell acute lymphoblastic leukemia","termid":"MONDO:0004947"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"B-lymphoblastic leukemia/lymphoma, BCR-ABL1–like","secondary_identifiers":["NCIT:C129787"],"termid":"MONDO:0850161","xrefs":{"Monarch":{"xref_id":"0850161"}}}


id: GO:0015983
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process of solute translocation in which two solutes equilibrate across an osmotic barrier, and the translocation of one solute is coupled to the translocation of the other in the same direction.","definition_xrefs":["ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete symport (obsolete GO:0015983)","synonyms":[{"name":"symport","type":"exact"}],"termid":"GO:0015983"}


id: PBO:0050814
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hepatitis B virus integration site 8","termid":"PBO:0050814"}


id: PBO:0087166
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase III subunit C34; interacts with TFIIIB70 and is a key determinant in pol III recruitment by the preinitiation complex","termid":"PBO:0087166"}


id: PBO:0089766
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"enoyl-[acyl-carrier-protein] reductase","termid":"PBO:0089766"}


id: MONDO:0014065
data:
  {"annotated_genes":["SJAG_00080"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85501],"is_not":false,"summary":null,"term":"MONDO:0014065"}]},"cv_name":"mondo","definition":"Any mitochondrial complex III deficiency in which the cause of the disease is a mutation in the UQCRQ gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial complex III deficiency, nuclear type","termid":"MONDO:0020811"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00080":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004069"],"is_obsolete":false,"name":"mitochondrial complex III deficiency nuclear type 4","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:767521","DOID:0080113","UMLS:C3554607","GARD:15912","OMIM:615159"],"synonyms":[{"name":"MC3DN4","type":"related"},{"name":"UQCRQ mitochondrial complex III deficiency","type":"exact"},{"name":"mitochondrial Complex 3 deficiency, nuclear type 4","type":"related"},{"name":"mitochondrial complex III deficiency caused by mutation in UQCRQ","type":"exact"},{"name":"mitochondrial complex III deficiency, nuclear type 4","type":"related"}],"termid":"MONDO:0014065","terms_by_termid":{"MONDO:0014065":null},"xrefs":{"Monarch":{"xref_id":"0014065"}}}


id: MONDO:0012023
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autosomal dominant nonsyndromic deafness that is characterized by moderate loss for low and mid frequencies and mild loss for high frequencies and has material basis in variation in the chromosome region 1q21-q23.","definition_xrefs":["DOID:0110572","PMID:14627674"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant nonsyndromic hearing loss","termid":"MONDO:0019587"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019497"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0019497"],"is_obsolete":false,"name":"autosomal dominant nonsyndromic hearing loss 49","secondary_identifiers":["GARD:18122","UMLS:C1842136","MEDGEN:331222","OMIM:608372","MESH:C564250"],"synonyms":[{"name":"DFNA49","type":"narrow"},{"name":"autosomal dominant deafness 49","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness 49","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness type 49","type":"narrow"},{"name":"deafness, autosomal dominant 49","type":"narrow"}],"termid":"MONDO:0012023","xrefs":{"Monarch":{"xref_id":"0012023"}}}


id: MONDO:0003900
data:
  {"annotated_genes":["SJAG_03905","SJAG_04077","SJAG_04287","SJAG_01884","SJAG_01474","SJAG_03151","SJAG_03881","SJAG_04541","SJAG_04380","SJAG_05213","SJAG_05239","SJAG_00853","SJAG_05979","SJAG_02039","SJAG_01344","SJAG_04865","SJAG_01151","SJAG_04969","SJAG_03429","SJAG_04118","SJAG_01349","SJAG_03785","SJAG_03453","SJAG_04290","SJAG_04569","SJAG_02763","SJAG_00321","SJAG_00031","SJAG_03596","SJAG_03805","SJAG_01748","SJAG_00400","SJAG_02855","SJAG_01013"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87573,87726,87572,87727,87574,87571],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0018874"},{"annotations":[85714],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012429"},{"annotations":[85545],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012471"},{"annotations":[85548],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012472"},{"annotations":[85634],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014007"},{"annotations":[87640],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014629"},{"annotations":[87595],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013944"},{"annotations":[85540,85541,85542],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009925"},{"annotations":[86532],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0002629"},{"annotations":[85701],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010621"},{"annotations":[87097],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009050"},{"annotations":[87156],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007205"},{"annotations":[86394],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007483"},{"annotations":[87013],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013766"},{"annotations":[87117,87116],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009849"},{"annotations":[86035],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007767"},{"annotations":[86036],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007768"},{"annotations":[86259],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012316"},{"annotations":[85443,85442],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012481"},{"annotations":[87052],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007908"},{"annotations":[87112],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054698"},{"annotations":[86923],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054700"},{"annotations":[85797,85798],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054699"},{"annotations":[85497,85498],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011462"},{"annotations":[86797],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0024541"},{"annotations":[86648],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013818"},{"annotations":[86265],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0026777"},{"annotations":[86015],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010523"}]},"cv_name":"mondo","definition":"A disease involving the connective tissue.","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"musculoskeletal system disorder","termid":"MONDO:0002081"},{"relation_name":"is_a","term_name":"human disease","termid":"MONDO:0700096"}],"gene_count":34,"genes_by_uniquename":{"SJAG_00031":null,"SJAG_00321":null,"SJAG_00400":null,"SJAG_00853":null,"SJAG_01013":null,"SJAG_01151":null,"SJAG_01344":null,"SJAG_01349":null,"SJAG_01474":null,"SJAG_01748":null,"SJAG_01884":null,"SJAG_02039":null,"SJAG_02763":null,"SJAG_02855":null,"SJAG_03151":null,"SJAG_03429":null,"SJAG_03453":null,"SJAG_03596":null,"SJAG_03785":null,"SJAG_03805":null,"SJAG_03881":null,"SJAG_03905":null,"SJAG_04077":null,"SJAG_04118":null,"SJAG_04287":null,"SJAG_04290":null,"SJAG_04380":null,"SJAG_04541":null,"SJAG_04569":null,"SJAG_04865":null,"SJAG_04969":null,"SJAG_05213":null,"SJAG_05239":null,"SJAG_05979":null},"genotype_count":0,"is_obsolete":false,"name":"connective tissue disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NCIT:C26729","EFO:1001986","UMLS:C0009782","DOID:65","NANDO:2100172","SCTID:105969002","MEDGEN:1098","MESH:D003240"],"synonyms":[{"name":"connective tissue disease","type":"exact"},{"name":"connective tissue disease or disorder","type":"exact"},{"name":"connective tissue diseases","type":"exact"},{"name":"connective tissue disorder","type":"exact"},{"name":"connective tissue disorders","type":"exact"},{"name":"disease of connective tissue","type":"exact"},{"name":"disease or disorder of connective tissue","type":"exact"},{"name":"disease, connective tissue","type":"exact"},{"name":"disorder of connective tissue","type":"exact"},{"name":"primary disorder of connective tissue","type":"exact"},{"name":"tissue disease, connective","type":"exact"}],"termid":"MONDO:0003900","terms_by_termid":{"MONDO:0002629":null,"MONDO:0007205":null,"MONDO:0007483":null,"MONDO:0007767":null,"MONDO:0007768":null,"MONDO:0007908":null,"MONDO:0009050":null,"MONDO:0009849":null,"MONDO:0009925":null,"MONDO:0010523":null,"MONDO:0010621":null,"MONDO:0011462":null,"MONDO:0012316":null,"MONDO:0012429":null,"MONDO:0012471":null,"MONDO:0012472":null,"MONDO:0012481":null,"MONDO:0013766":null,"MONDO:0013818":null,"MONDO:0013944":null,"MONDO:0014007":null,"MONDO:0014629":null,"MONDO:0018874":null,"MONDO:0024541":null,"MONDO:0026777":null,"MONDO:0054698":null,"MONDO:0054699":null,"MONDO:0054700":null},"xrefs":{"Monarch":{"xref_id":"0003900"}}}


id: FYPO:0007635
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the acetylation of lysine at position 16 of histone H4 in regions containing protein coding genes occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone H4-K16 acetylation during vegetative growth","termid":"FYPO:0007632"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0002274","FYPO:0000002","FYPO:0002494"],"is_obsolete":false,"name":"increased histone H4-K16 acetylation at protein coding gene during vegetative growth","synonyms":[{"name":"increased histone H4-K16 acetylation at protein coding gene during mitotic cell cycle","type":"related"},{"name":"increased histone H4K16 acetylation at protein coding gene during vegetative growth","type":"exact"},{"name":"increased histone H4K16 acetylation at protein-coding gene during vegetative growth","type":"exact"}],"termid":"FYPO:0007635"}


id: PBO:0036079
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_transport_along_microtubule_during_vegetative_growth","termid":"PBO:0036079"}


id: GO:0010814
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of the neuropeptide substance P.","definition_xrefs":["GOC:rl","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuropeptide catabolic process","termid":"GO:0010813"},{"relation_name":"is_a","term_name":"amide metabolic process","termid":"GO:0043603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"substance P catabolic process","termid":"GO:0010814"}


id: GO:0005573
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:krc"],"gene_count":0,"genotype_count":0,"name":"obsolete telomerase RNA (obsolete GO:0005573)","synonyms":[{"name":"telomerase RNA","type":"exact"}],"termid":"GO:0005573"}


id: PBO:0068135
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 442","termid":"PBO:0068135"}


id: FYPO:0005801
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the movement of one or more proteins within the plasma membrane of the cell tip occurs more slowly than normal.","definition_xrefs":["PMID:25837586","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein movement within plasma membrane during vegetative growth","termid":"FYPO:0005800"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased rate of protein movement within plasma membrane at cell tip","synonyms":[{"name":"decreased rate of protein movement within plasma membrane at cell tip during mitotic cell cycle","type":"related"},{"name":"decreased rate of protein movement within plasma membrane at cell tip during vegetative growth","type":"exact"},{"name":"reduced rate of protein movement within plasma membrane at cell tip","type":"exact"},{"name":"slow protein movement within plasma membrane at cell tip","type":"exact"}],"termid":"FYPO:0005801"}


id: PR:O74926
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rbd2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74926"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rhomboid protein 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC790.03","synonyms":[{"name":"Spom972h-rbd2","type":"exact"}],"termid":"PR:O74926"}


id: MONDO:0006674
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A rare neoplasm, usually benign, derived from mesenchymal fibroblasts located in the submesothelial lining of the PLEURA. It spite of its various synonyms, it has no features of mesothelial cells and is not related to malignant MESOTHELIOMA or asbestos exposure.","definition_xrefs":["EFO:1000835"],"gene_count":0,"genotype_count":0,"name":"obsolete benign fibrous mesothelioma (obsolete MONDO:0006674)","secondary_identifiers":["SCTID:254646001","MESH:D054363","NCIT:C4457","DOID:2653"],"synonyms":[{"name":"fibrous mesothelioma, benign","type":"exact"},{"name":"fibrous mesothelioma, benign (morphologic abnormality)","type":"exact"},{"name":"localized benign fibrous mesothelioma","type":"exact"},{"name":"solitary fibrous tumor, pleural","type":"related"}],"termid":"MONDO:0006674","xrefs":{"Monarch":{"xref_id":"0006674"}}}


id: PBO:0081626
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 556","termid":"PBO:0081626"}


id: GO:1990074
data:
  {"annotated_genes":["SJAG_03876","SJAG_04118","SJAG_02383","SJAG_02370"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[66819,91146,117613],"is_not":false,"summary":null,"term":"GO:1990074"},{"annotations":[92034],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0036450"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a messenger RNA (mRNA) molecule, initiated by the enzymatic addition of a sequence of uridylyl residues (polyuridylation) at the 3' end of the target mRNA.","definition_xrefs":["GOC:vw","PMID:23503588"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mRNA catabolic process","termid":"GO:0006402"},{"relation_name":"is_a","term_name":"modification-dependent macromolecule catabolic process","termid":"GO:0043632"},{"relation_name":"is_a","term_name":"mRNA destabilization","termid":"GO:0061157"}],"gene_count":4,"genes_by_uniquename":{"SJAG_02370":null,"SJAG_02383":null,"SJAG_03876":null,"SJAG_04118":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0016071"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0016071"},{"rel_name":"regulates","termid":"GO:0016071"}],"interesting_parent_ids":["GO:0016071","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"polyuridylation-dependent mRNA catabolic process","references_by_uniquename":{"GO_REF:0000104":null,"GO_REF:0000107":null},"termid":"GO:1990074","terms_by_termid":{"GO:0036450":null,"GO:1990074":null}}


id: MONDO:0015137
data:
  {"annotated_genes":["SJAG_04865","SJAG_00321","SJAG_01474"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87013],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013766"},{"annotations":[87116,87117],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009849"},{"annotations":[85442,85443],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012481"}]},"cv_name":"mondo","definition":"Fevers of unknown etiology recurring over months or years.","definition_xrefs":["NCIT:C118240"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autoinflammatory syndrome","termid":"MONDO:0019751"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00321":null,"SJAG_01474":null,"SJAG_04865":null},"genotype_count":0,"is_obsolete":false,"name":"periodic fever syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["Orphanet:101995","UMLS:C3889979","GARD:19812","MedDRA:10034533","MEDGEN:855463"],"termid":"MONDO:0015137","terms_by_termid":{"MONDO:0009849":null,"MONDO:0012481":null,"MONDO:0013766":null},"xrefs":{"Monarch":{"xref_id":"0015137"}}}


id: PATO:0000138
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000138 absolute orientation (obsolete PATO:0000138)","termid":"PATO:0000138"}


id: MONDO:0003201
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete esophagus adenocarcinoma (obsolete MONDO:0003201)","termid":"MONDO:0003201","xrefs":{"Monarch":{"xref_id":"0003201"}}}


id: PBO:0038581
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat and BTB domain containing 1","termid":"PBO:0038581"}


id: PBO:0110466
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"a master non-coding RNA antagonizing inflammation","termid":"PBO:0110466"}


id: PBO:0002802
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin Nup155","termid":"PBO:0002802"}


id: MONDO:0022020
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Familial syndrome combining short stature, microcephaly, mental deficiency, seizures, hearing loss, and skin lesions","definition_xrefs":["GARD:0000945"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"excluded_subClassOf","term_name":"intellectual disability","termid":"MONDO:0001071"},{"relation_name":"is_a","term_name":"skin disorder","termid":"MONDO:0005093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"Boudhina Yedes Khiari syndrome","secondary_identifiers":["MESH:C537939","MEDGEN:419467","UMLS:C2931668"],"termid":"MONDO:0022020","xrefs":{"Monarch":{"xref_id":"0022020"}}}


id: FYPO:0000267
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to ionizing radiation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensitive to stress during vegetative growth","termid":"FYPO:0000304"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0001985","FYPO:0005447","FYPO:0000139"],"is_obsolete":false,"name":"sensitive to ionizing radiation during vegetative growth","synonyms":[{"name":"decreased vegetative cell population growth during cellular response to ionizing radiation","type":"exact"},{"name":"hypersensitive to ionizing radiation during vegetative growth","type":"exact"},{"name":"sensitive to IR during vegetative growth","type":"exact"},{"name":"sensitive to gamma irradiation during vegetative growth","type":"narrow"},{"name":"sensitive to gamma radiation during vegetative growth","type":"narrow"},{"name":"sensitive to ionizing radiation during mitotic cell cycle","type":"related"}],"termid":"FYPO:0000267"}


id: GO:0003387
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a neuron that contributes to the progression of the amphid sensory gland.","definition_xrefs":["GOC:ascb_2009","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron differentiation","termid":"GO:0030182"},{"relation_name":"part_of","term_name":"amphid sensory organ development","termid":"GO:0003386"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuron differentiation involved in amphid sensory organ development","termid":"GO:0003387"}


id: PR:O14134
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- elf1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14134"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA export factor elf1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3C7.08c","synonyms":[{"name":"Spom972h-elf1","type":"exact"}],"termid":"PR:O14134"}


id: PBO:0051247
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable (II)-78-1 (pseudogene)","termid":"PBO:0051247"}


id: GO:0051078
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell cycle process in which the controlled breakdown of the nuclear membranes during meiotic cell division occurs.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear membrane disassembly","termid":"GO:0051081"},{"relation_name":"is_a","term_name":"meiotic cell cycle process","termid":"GO:1903046"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0061024"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0007049","GO:0061024","GO:0008150"],"is_obsolete":false,"name":"meiotic nuclear membrane disassembly","synonyms":[{"name":"meiotic nuclear envelope breakdown","type":"related"},{"name":"meiotic nuclear envelope catabolism","type":"related"},{"name":"meiotic nuclear envelope degradation","type":"related"},{"name":"meiotic nuclear envelope disassembly","type":"related"}],"termid":"GO:0051078"}


id: SO:1001286
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A recoding stimulatory signal, downstream sequence important for recoding that contains repetitive elements.","definition_xrefs":["PMID:12519954","SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"three_prime_recoding_site","termid":"SO:1001277"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"three_prime_repeat_recoding_signal","synonyms":[{"name":"three prime repeat recoding signal","type":"exact"}],"termid":"SO:1001286"}


id: PBO:0087100
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal protein 28 (rp28) of the small (40S) ribosomal subunit; required for translational accuracy; homologous to mammalian ribosomal protein S23 and bacterial S12; RPS23A has a paralog, RPS23B, that arose from the whole genome duplication; deletion of both RPS23A and RPS23B is lethal","termid":"PBO:0087100"}


id: PBO:0056532
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methylcrotonyl-CoA carboxylase subunit 1","termid":"PBO:0056532"}


id: MOD:00877
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"dimethyl pimelimidate modification from Unimod","definition_xrefs":["URL:http://www.piercenet.com/files/0668ss5.pdf","Unimod:455"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"imidoester crosslink dimethyl pimelimidate singly attached","synonyms":[{"name":"One end of crosslink attached, one end free","type":"related"},{"name":"Xlink:DMP-s","type":"related"}],"termid":"MOD:00877"}


id: GO:0019155
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-3-(imidazol-5-yl)lactate + NADP+ = 3-(imidazol-5-yl)pyruvate + NADPH + H+.","definition_xrefs":["EC:1.1.1.111"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"3-(imidazol-5-yl)lactate dehydrogenase activity","secondary_identifiers":["MetaCyc:IMILACTDEHYDROG-RXN"],"synonyms":[{"name":"(S)-3-(imidazol-5-yl)lactate:NAD(P)+ oxidoreductase activity","type":"related"},{"name":"imidazol-5-yl lactate dehydrogenase activity","type":"related"}],"termid":"GO:0019155"}


id: PBO:0049011
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G-patch domain and KOW motifs","termid":"PBO:0049011"}


id: PBO:0029094
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_quinidine","termid":"PBO:0029094"}


id: PBO:0089676
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major facilitator family transmembrane transporter Mug111","termid":"PBO:0089676"}


id: PBO:0002375
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAPADILINO syndrome","termid":"PBO:0002375"}


id: PBO:0040813
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BICD family like cargo adaptor 2","termid":"PBO:0040813"}


id: GO:1990298
data:
  {"annotated_genes":["SJAG_01082","SJAG_02451"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[80247,114869],"is_not":false,"summary":null,"term":"GO:1990298"}]},"cv_name":"cellular_component","definition":"Protein complex that associates with the kinetochores.","definition_xrefs":["PMID:22521786"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01082":null,"SJAG_02451":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"bub1-bub3 complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:1990298","terms_by_termid":{"GO:1990298":null}}


id: GO:0009760
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The combination of atmospheric CO2 with a 3-carbon molecule phosphoenol pyruvate (PEP) in the mesophyll cells to make a 4-carbon acid which is immediately converted to malic acid. The malic acid is then passed across to the bundle sheath cells where it is broken down again to pyruvic acid and CO2. The acid is passed back to the mesophyll cells to be used again, while the CO2 is fed into the reductive pentose-phosphate cycle (Calvin cycle) and converted into sugar and starch.","definition_xrefs":["ISBN:0816017360"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon fixation","termid":"GO:0015977"},{"relation_name":"is_a","term_name":"photosynthesis, dark reaction","termid":"GO:0019685"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"C4 photosynthesis","secondary_identifiers":["Wikipedia:C4_carbon_fixation"],"termid":"GO:0009760"}


id: PBO:0000920
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anaphase-promoting complex subunit Cut9","termid":"PBO:0000920"}


id: GO:0030224
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized myeloid precursor cell acquires the specialized features of a monocyte.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myeloid leukocyte differentiation","termid":"GO:0002573"},{"relation_name":"is_a","term_name":"mononuclear cell differentiation","termid":"GO:1903131"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"monocyte differentiation","synonyms":[{"name":"monocyte cell differentiation","type":"exact"}],"termid":"GO:0030224"}


id: PR:Q9P6R5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A GPI mannosyltransferase 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR12886:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GPI mannosyltransferase 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC13E7.05","secondary_identifiers":["UniProtKB:Q9P6R5"],"synonyms":[{"name":"GPI mannosyltransferase I (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"GPI-MT-I (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SPBC13E7.05","type":"related"},{"name":"Spom972h-PIGM","type":"exact"},{"name":"glycosylphosphatidylinositol-anchor biosynthesis protein 14 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P6R5"}


id: GO:0090567
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a reproductive shoot system over time, from its formation to the mature structure.","definition_xrefs":["GOC:pj"],"direct_ancestors":[{"relation_name":"is_a","term_name":"post-embryonic development","termid":"GO:0009791"},{"relation_name":"is_a","term_name":"shoot system development","termid":"GO:0048367"},{"relation_name":"is_a","term_name":"reproductive structure development","termid":"GO:0048608"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"reproductive shoot system development","termid":"GO:0090567"}


id: MONDO:1010066
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Microcephaly that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of development or morphogenesis, non-human animal","termid":"MONDO:1011313"},{"relation_name":"is_a","term_name":"nervous system disorder, non-human animal","termid":"MONDO:1011336"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microcephaly, non-human animal","secondary_identifiers":["OMIA:000645"],"termid":"MONDO:1010066","xrefs":{"Monarch":{"xref_id":"1010066"}}}


id: GO:0060964
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that modulates the rate, frequency, or extent of the downregulation of gene expression through the action of microRNAs (miRNAs).","definition_xrefs":["GOC:bc","GOC:dph","GOC:tb","GOC:rl","PMID:23985560","PMID:28379604","GOC:aruk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of post-transcriptional gene silencing by regulatory ncRNA","termid":"GO:1900368"},{"relation_name":"regulates","term_name":"miRNA-mediated post-transcriptional gene silencing","termid":"GO:0035195"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of miRNA-mediated gene silencing","secondary_identifiers":["Reactome:R-HSA-5578749"],"synonyms":[{"name":"regulation of gene silencing by miRNA","type":"exact"},{"name":"regulation of gene silencing by microRNA","type":"exact"}],"termid":"GO:0060964"}


id: PBO:0069542
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 812, pseudogene","termid":"PBO:0069542"}


id: MONDO:0003043
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A rare malignant tumor of soft tissue characterized by a bimorphic pattern composed of undifferentiated small round cells and islands of well differentiated hyaline cartilage.","definition_xrefs":["NCIT:P378"],"gene_count":0,"genotype_count":0,"name":"obsolete extraskeletal mesenchymal chondrosarcoma (obsolete MONDO:0003043)","secondary_identifiers":["SCTID:404080006","NCIT:C27481","ICD9:171.9","DOID:4548"],"synonyms":[{"name":"mesenchymal extraosseous chondrosarcoma","type":"exact"},{"name":"mesenchymal extraskeletal chondrosarcoma","type":"exact"}],"termid":"MONDO:0003043","xrefs":{"Monarch":{"xref_id":"0003043"}}}


id: GO:1905366
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of intralumenal vesicle formation.","definition_xrefs":["GOC:PARL","GO_REF:0000058","GOC:bc","GOC:TermGenie","PMID:26911690"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of transport","termid":"GO:0051051"},{"relation_name":"is_a","term_name":"negative regulation of endosome organization","termid":"GO:1904979"},{"relation_name":"is_a","term_name":"regulation of intralumenal vesicle formation","termid":"GO:1905365"},{"relation_name":"negatively_regulates","term_name":"intralumenal vesicle formation","termid":"GO:0070676"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0061024"},{"rel_name":"negatively_regulates","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0061024","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of intralumenal vesicle formation","synonyms":[{"name":"down regulation of endosome membrane budding","type":"exact"},{"name":"down regulation of intralumenal vesicle formation","type":"exact"},{"name":"down-regulation of endosome membrane budding","type":"exact"},{"name":"down-regulation of intralumenal vesicle formation","type":"exact"},{"name":"downregulation of endosome membrane budding","type":"exact"},{"name":"downregulation of intralumenal vesicle formation","type":"exact"},{"name":"inhibition of endosome membrane budding","type":"narrow"},{"name":"inhibition of intralumenal vesicle formation","type":"narrow"},{"name":"negative regulation of endosome membrane budding","type":"exact"}],"termid":"GO:1905366"}


id: PBO:0043663
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COQ7 divergent transcript","termid":"PBO:0043663"}


id: PBO:0042445
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDC42 effector protein 3 pseudogene 1","termid":"PBO:0042445"}


id: PATO:0001956
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A variability quality inhering in a bearer by virtue of whether the bearer exhibits size variation or change.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"variability","termid":"PATO:0001303"},{"relation_name":"towards","term_name":"size","termid":"PATO:0000117"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"variability of size","termid":"PATO:0001956"}


id: GO:2000163
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of planar cell polarity pathway involved in outflow tract morphogenesis.","definition_xrefs":["GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of planar cell polarity pathway involved in outflow tract morphogenesis (obsolete GO:2000163)","termid":"GO:2000163"}


id: PBO:0043553
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COL4A2 antisense RNA 2","termid":"PBO:0043553"}


id: PBO:0091073
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytidylyltransferase","termid":"PBO:0091073"}


id: GO:1904397
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of neuromuscular junction development.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:7722643"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of neuromuscular junction development","termid":"GO:1904396"},{"relation_name":"is_a","term_name":"negative regulation of synapse organization","termid":"GO:1905809"},{"relation_name":"negatively_regulates","term_name":"neuromuscular junction development","termid":"GO:0007528"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of neuromuscular junction development","synonyms":[{"name":"down regulation of NMJ stability","type":"related"},{"name":"down regulation of neuromuscular junction development","type":"exact"},{"name":"down regulation of neuromuscular junction organization","type":"exact"},{"name":"down regulation of neuromuscular junction stability","type":"related"},{"name":"down-regulation of NMJ stability","type":"related"},{"name":"down-regulation of neuromuscular junction development","type":"exact"},{"name":"down-regulation of neuromuscular junction organization","type":"exact"},{"name":"down-regulation of neuromuscular junction stability","type":"related"},{"name":"downregulation of NMJ stability","type":"related"},{"name":"downregulation of neuromuscular junction development","type":"exact"},{"name":"downregulation of neuromuscular junction organization","type":"exact"},{"name":"downregulation of neuromuscular junction stability","type":"related"},{"name":"inhibition of NMJ stability","type":"related"},{"name":"inhibition of neuromuscular junction development","type":"narrow"},{"name":"inhibition of neuromuscular junction organization","type":"narrow"},{"name":"inhibition of neuromuscular junction stability","type":"related"},{"name":"negative regulation of NMJ stability","type":"related"},{"name":"negative regulation of neuromuscular junction organization","type":"exact"},{"name":"negative regulation of neuromuscular junction stability","type":"related"}],"termid":"GO:1904397"}


id: PBO:0002834
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA Elimiation Defective","termid":"PBO:0002834"}


id: MOD:01519
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A distinct molecular entity produced from a protein or a protein modification as the result of a fragmentation process.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification categorized by chemical process","termid":"MOD:01156"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"reporter fragment","termid":"MOD:01519"}


id: FYPO:0002411
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetatively growing cell is inviable, is elongated, and is curved along the long axis. In a curved cell, the long axis follows a smooth bend rather than a straight line.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable elongated vegetative cell","termid":"FYPO:0001490"},{"relation_name":"is_a","term_name":"inviable curved vegetative cell","termid":"FYPO:0002113"},{"relation_name":"is_a","term_name":"curved elongated vegetative cell","termid":"FYPO:0005103"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000004","FYPO:0001985","FYPO:0000005"],"is_obsolete":false,"name":"inviable curved elongated vegetative cell","synonyms":[{"name":"curved elongated inviable cell","type":"exact"},{"name":"inviable curved elongated cell","type":"exact"},{"name":"inviable curved elongated cell during vegetative growth","type":"exact"},{"name":"inviable curved elongated vegetative cell during mitotic cell cycle","type":"related"},{"name":"lethal; curved elongated vegetative cell","type":"exact"}],"termid":"FYPO:0002411"}


id: MONDO:0023048
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"ectodermal dysplasia syndrome","termid":"MONDO:0019287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"ectodermal dysplasia neurosensory deafness","secondary_identifiers":["GARD:2053"],"termid":"MONDO:0023048","xrefs":{"Monarch":{"xref_id":"0023048"}}}


id: MONDO:0005177
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A serous neoplasm in which the cysts and papillae are lined by a single layer of cells without atypia, architectural complexity or invasion.","definition_xrefs":["NCIT:C3783"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cystadenoma","termid":"MONDO:0002369"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serous cystadenoma","secondary_identifiers":["EFO:0002504","MEDGEN:64636","ICDO:8441/0","UMLS:C0206709"],"synonyms":[{"name":"serous cystadenoma","type":"exact"},{"name":"serous cystoma","type":"exact"}],"termid":"MONDO:0005177","xrefs":{"Monarch":{"xref_id":"0005177"}}}


id: PBO:0062398
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 21 pseudogene","termid":"PBO:0062398"}


id: FYPO:0003009
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the centromere outer repeat regions of a chromosome is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to centromere during vegetative growth","termid":"FYPO:0000449"},{"relation_name":"is_a","term_name":"increased protein localization to chromosome during vegetative growth","termid":"FYPO:0002840"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0000138","FYPO:0005447"],"is_obsolete":false,"name":"increased protein localization to centromere outer repeat","synonyms":[{"name":"increased protein localisation to centromere outer repeat","type":"exact"},{"name":"increased protein localisation to centromeric outer repeat region","type":"exact"},{"name":"increased protein localization to centromere outer repeat during mitotic cell cycle","type":"related"},{"name":"increased protein localization to centromere outer repeat during vegetative growth","type":"exact"},{"name":"increased protein localization to chromosome, centric outer repeat region","type":"exact"},{"name":"increased protein localization to chromosome, centromeric outer repeat region","type":"exact"},{"name":"increased protein localization to pericentric region","type":"related"},{"name":"increased protein localization to pericentromeric region","type":"related"}],"termid":"FYPO:0003009"}


id: FYPO:0006003
data:
  {"alleles_by_uniquename":{"SJAG_04883:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04883","name":"ptp4delta","uniquename":"SJAG_04883:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[119895],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001007"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which any process of cellular component organization at the cellular level is normal (i.e. indistinguishable from wild type).","definition_xrefs":["GO:0016043","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component organization phenotype","termid":"FYPO:0000334"},{"relation_name":"is_a","term_name":"normal cellular process","termid":"FYPO:0000627"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04883":null},"genotype_count":1,"genotypes_by_uniquename":{"ptp4delta":{"display_name":"ptp4delta","display_uniquename":"ptp4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04883:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal cellular component organization","references_by_uniquename":{"PMID:36695178":null},"single_locus_annotated_genes":["SJAG_04883"],"single_locus_genotype_uniquenames":["ptp4delta"],"synonyms":[{"name":"normal cellular component organisation","type":"exact"},{"name":"normal cellular component organization at cellular level","type":"exact"}],"termid":"FYPO:0006003","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000137":null,"FYPO:0001007":null}}


id: PBO:0065177
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PROP paired-like homeobox 1","termid":"PBO:0065177"}


id: PBO:0034783
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Hrd1 ubiquitin ligase complex synviolin family ubiquitin-protein ligase E3 subunit, Hrd1","termid":"PBO:0034783"}


id: MONDO:0060629
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with or without hyperkinetic movements and seizures, autosomal recessive","secondary_identifiers":["OMIM:617820","UMLS:C4693325","MEDGEN:1646665","EFO:0009300"],"synonyms":[{"name":"NDHMSR","type":"related"},{"name":"neurodevelopmental disorder with or without hyperkinetic movements and seizures, autosomal recessive","type":"exact"}],"termid":"MONDO:0060629","xrefs":{"Monarch":{"xref_id":"0060629"}}}


id: PBO:0082682
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the ESCRT-II complex; ESCRT-II is involved in ubiquitin-dependent sorting of proteins into the endosome","termid":"PBO:0082682"}


id: GO:1902050
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of neosartoricin.","definition_xrefs":["GOC:di","GOC:TermGenie","PMID:23368997"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyketide biosynthetic process","termid":"GO:0030639"},{"relation_name":"is_a","term_name":"ketone biosynthetic process","termid":"GO:0042181"},{"relation_name":"is_a","term_name":"phenol-containing compound biosynthetic process","termid":"GO:0046189"},{"relation_name":"is_a","term_name":"acetate ester biosynthetic process","termid":"GO:1900620"},{"relation_name":"is_a","term_name":"neosartoricin metabolic process","termid":"GO:1902048"},{"relation_name":"is_a","term_name":"tertiary alcohol biosynthetic process","termid":"GO:1902645"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0019748"],"is_obsolete":false,"name":"neosartoricin biosynthetic process","synonyms":[{"name":"neosartoricin anabolism","type":"exact"},{"name":"neosartoricin biosynthesis","type":"exact"},{"name":"neosartoricin formation","type":"exact"},{"name":"neosartoricin synthesis","type":"exact"}],"termid":"GO:1902050"}


id: PBO:0017886
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spermidine family transmembrane transporter (predicted)","termid":"PBO:0017886"}


id: PBO:0077519
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 234","termid":"PBO:0077519"}


id: FYPO:0005010
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype in which the phosphorylation of serine residues three positions C-terminal to arginine residues (i.e. in Arg-X-X-Ser, or RxxS, sequences) occurs to a greater extent than normal when the cell is subject to nitrogen starvation.","definition_xrefs":["PMID:22976295","PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete increased protein serine phosphorylation at RxxS site during nitrogen starvation (obsolete FYPO:0005010)","synonyms":[{"name":"increased protein serine phosphorylation at Arg-X-X-Ser site during nitrogen starvation","type":"exact"},{"name":"increased protein serine phosphorylation at PAS site during nitrogen starvation","type":"exact"},{"name":"increased protein serine phosphorylation at RxxS site during cellular response to nitrogen starvation","type":"exact"},{"name":"increased protein serine phosphorylation at RxxS site during nitrogen depletion","type":"exact"},{"name":"increased protein serine phosphorylation at RxxS site during nitrogen deprivation","type":"exact"},{"name":"increased protein serine phosphorylation at arginine-X-X-serine site during nitrogen starvation","type":"exact"},{"name":"increased protein serine phosphorylation at phospho-Akt site during nitrogen starvation","type":"exact"}],"termid":"FYPO:0005010"}


id: GO:0033275
data:
  {"annotated_genes":["SJAG_00750"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[118021],"is_not":false,"summary":null,"term":"GO:0033275"}]},"cv_name":"biological_process","definition":"The sliding movement of actin thin filaments and myosin thick filaments past each other.","definition_xrefs":["GOC:pf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actin-mediated cell contraction","termid":"GO:0070252"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00750":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"actin-myosin filament sliding","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"actin filament sliding","type":"related"}],"termid":"GO:0033275","terms_by_termid":{"GO:0033275":null}}


id: PBO:0003965
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit S35","termid":"PBO:0003965"}


id: GO:0106069
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A SUMO-E3 ligase complex capable of promoting synapsis, the meiotic cell cycle process where side by side pairing and physical juxtaposition of homologous chromosomes is created during meiotic prophase.","definition_xrefs":["PMID:16847351"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SUMO ligase complex","termid":"GO:0106068"},{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"},{"relation_name":"part_of","term_name":"condensed nuclear chromosome","termid":"GO:0000794"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"part_of","termid":"GO:0005694"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005694","GO:0005634"],"is_obsolete":false,"name":"synapsis initiation complex","termid":"GO:0106069"}


id: RO:0002641
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"inverse of intracellular endoparasite of","direct_ancestors":[{"relation_name":"is_a","term_name":"has_endoparasite","termid":"RO:0002635"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_intracellular_endoparasite","termid":"RO:0002641"}


id: PBO:0004884
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin alpha 1","termid":"PBO:0004884"}


id: PR:G2TRJ6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC1093.07 gene.","definition_xrefs":["PRO:DNx","UniProtKB:G2TRJ6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1093.07 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1093.07","synonyms":[{"name":"Spom972h-SPAC1093.07","type":"exact"}],"termid":"PR:G2TRJ6"}


id: PBO:0050399
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein C like 4","termid":"PBO:0050399"}


id: PBO:0052639
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 8 pseudogene 7","termid":"PBO:0052639"}


id: PBO:0043337
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CLN6 transmembrane ER protein","termid":"PBO:0043337"}


id: GO:0060909
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of initiation of plasmid DNA replication that contributes to copy number maintenance.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of DNA-templated DNA replication initiation","termid":"GO:0030174"},{"relation_name":"part_of","term_name":"plasmid copy number maintenance","termid":"GO:0060908"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0006260"}],"interesting_parent_ids":["GO:0006259","GO:0006260","GO:0008150"],"is_obsolete":false,"name":"regulation of DNA replication initiation involved in plasmid copy number maintenance","termid":"GO:0060909"}


id: GO:0015142
data:
  {"annotated_genes":["SJAG_01872"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72929],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071913"}]},"cv_name":"molecular_function","definition":"Enables the transfer of tricarboxylic acids from one side of a membrane to the other. Tricarboxylic acid are organic acids with three COOH groups.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transporter activity","termid":"GO:0046943"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01872":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"tricarboxylic acid transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-372449","Reactome:R-HSA-75849"],"synonyms":[{"name":"sodium:dicarboxylate/tricarboxylate symporter activity","type":"narrow"}],"termid":"GO:0015142","terms_by_termid":{"GO:0071913":null}}


id: PBO:0005637
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.7.8.8","termid":"PBO:0005637"}


id: PBO:0049530
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2A.Z histone pseudogene 1","termid":"PBO:0049530"}


id: PBO:0074199
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 39 member 9","termid":"PBO:0074199"}


id: MONDO:0016546
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Primary orthostatic tremor (POT), or ``shaky legs syndrome'', is a rare movement disorder characterized by fast, task-specific tremor, affecting the legs and trunk while standing.","definition_xrefs":["Orphanet:238606"],"direct_ancestors":[{"relation_name":"is_a","term_name":"movement disorder","termid":"MONDO:0005395"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"primary orthostatic tremor","secondary_identifiers":["UMLS:C0878578","MEDGEN:164206","SCTID:715902009","GARD:8563","MESH:C536418","NORD:1612"],"synonyms":[{"name":"OT","type":"related"},{"name":"POT","type":"exact"},{"name":"orthostatic tremor, primary","type":"related"},{"name":"pot","type":"exact"},{"name":"shaky leg syndrome","type":"related"}],"termid":"MONDO:0016546","xrefs":{"Monarch":{"xref_id":"0016546"}}}


id: PBO:0065011
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PR/SET domain 15","termid":"PBO:0065011"}


id: PBO:0067411
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 521, pseudogene","termid":"PBO:0067411"}


id: FYPO:0004496
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a cell is smaller than normal and contains more than one septum, when the cell is in a culture in stationary phase.","definition_xrefs":["PMID:8292390","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small cell","termid":"FYPO:0000023"},{"relation_name":"is_a","term_name":"multiseptate cell","termid":"FYPO:0004295"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000005","FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"small multiseptate cell during stationary phase","termid":"FYPO:0004496"}


id: GO:0140885
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont interferes with, inhibits or disrupts a type III interferon-mediated signaling in the host organism. Type III interferon is also known as interferon-lambda.","definition_xrefs":["PMID:32464097"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated suppression of host interferon-mediated signaling pathway","termid":"GO:0140886"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host type III interferon-mediated signaling pathway","synonyms":[{"name":"negative regulation by virus of host type III interferon-mediated signaling pathway","type":"exact"},{"name":"suppression by virus of host type III IFN-mediated signaling pathway","type":"exact"},{"name":"suppression by virus of host type III interferon-mediated signaling pathway","type":"narrow"},{"name":"suppression by virus of host type III interferon-mediated signalling pathway","type":"exact"}],"termid":"GO:0140885"}


id: PBO:0111836
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUMO interaction motif","termid":"PBO:0111836"}


id: GO:0021650
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to the vestibulocochlear nerve. This process pertains to the initial formation of a structure from unspecified parts. This sensory nerve innervates the membranous labyrinth of the inner ear. The vestibular branch innervates the vestibular apparatus that senses head position changes relative to gravity. The auditory branch innervates the cochlear duct, which is connected to the three bony ossicles which transduce sound waves into fluid movement in the cochlea.","definition_xrefs":["GOC:cls","GOC:dph","GOC:dgh","ISBN:0838580343","GOC:jid","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve formation","termid":"GO:0021603"},{"relation_name":"part_of","term_name":"vestibulocochlear nerve morphogenesis","termid":"GO:0021648"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vestibulocochlear nerve formation","synonyms":[{"name":"CN VII formation","type":"related"}],"termid":"GO:0021650"}


id: GO:0033946
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: xyloglucan + H2O = xyloglucan oligosaccharides. This reaction is the endohydrolysis of (1->4)-beta-D-glucosidic linkages in xyloglucan.","definition_xrefs":["EC:3.2.1.151"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta-glucanase activity","termid":"GO:0052736"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016798","GO:0016787","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"xyloglucan-specific endo-beta-1,4-glucanase activity","secondary_identifiers":["MetaCyc:3.2.1.151-RXN"],"synonyms":[{"name":"1,4-beta-D-glucan glucanohydrolase activity","type":"broad"},{"name":"XEG","type":"related"},{"name":"XH","type":"related"},{"name":"[(1->6)-beta-D-xylo]-(1->4)-beta-D-glucan glucanohydrolase activity","type":"related"},{"name":"xyloglucan endo-beta-1,4-glucanase activity","type":"related"},{"name":"xyloglucanase activity","type":"related"},{"name":"xyloglucanendohydrolase activity","type":"related"}],"termid":"GO:0033946"}


id: GO:0047355
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: glycerophosphate(n) + CDP-glycerol = glycerophosphate(n+1) + CMP.","definition_xrefs":["EC:2.7.8.12"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, for other substituted phosphate groups","termid":"GO:0016780"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016780"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016780","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"CDP-glycerol glycerophosphotransferase activity","secondary_identifiers":["MetaCyc:TEICHOICSYN4-RXN","RHEA:13565"],"synonyms":[{"name":"CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase activity","type":"related"},{"name":"CDPglycerol glycerophosphotransferase activity","type":"related"},{"name":"CGPTase activity","type":"related"},{"name":"cytidine diphosphoglycerol glycerophosphotransferase activity","type":"related"},{"name":"glycerophosphate synthetase activity","type":"related"},{"name":"poly(glycerol phosphate) polymerase activity","type":"related"},{"name":"teichoic acid glycerol transferase activity","type":"related"},{"name":"teichoic-acid synthase activity","type":"broad"}],"termid":"GO:0047355"}


id: PBO:0082075
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5'-3' exonuclease and flap-endonuclease; involved in recombination, double-strand break repair, MMS2 error-free branch of the post replication (PRR) pathway and DNA mismatch repair; role in telomere maintenance; member of the Rad2p nuclease family, with conserved N and I nuclease domains; relative distribution to the nucleus increases upon DNA replication stress; EXO1 has a paralog, DIN7, that arose from the whole genome duplication","termid":"PBO:0082075"}


id: MONDO:0005209
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete cutaneous T-cell lymphoma (obsolete MONDO:0005209)","termid":"MONDO:0005209","xrefs":{"Monarch":{"xref_id":"0005209"}}}


id: GO:0003272
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process pertaining to the initial formation of an endocardial cushion. The endocardial cushion is a specialized region of mesenchymal cells that will give rise to the heart septa and valves.","definition_xrefs":["PMID:15797462","GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"endocardial cushion morphogenesis","termid":"GO:0003203"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"endocardial cushion formation","termid":"GO:0003272"}


id: PBO:0090789
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COPII vesicle coat component Erp5/Erp6/Erp1","termid":"PBO:0090789"}


id: PBO:0056026
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LSP1 pseudogene 4","termid":"PBO:0056026"}


id: GO:0003041
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the molecular signal from a carotid body is relayed to the vasomotor center, causing it to signal an increase arterial pressure.","definition_xrefs":["GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"excitation of vasomotor center by chemoreceptor signaling","termid":"GO:0002008"},{"relation_name":"part_of","term_name":"regulation of systemic arterial blood pressure by carotid body chemoreceptor signaling","termid":"GO:0003027"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"excitation of vasomotor center by carotid body chemoreceptor signaling","synonyms":[{"name":"excitation of vasomotor center by carotid body chemoreceptor signalling","type":"exact"}],"termid":"GO:0003041"}


id: FYPO:0006976
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of RNA measured in a cell during the meiotic cell cycle is normal (i.e. indistinguishable from wild type). Total RNA or a specific RNA, such as the mRNA transcribed from a gene of interest, may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal RNA level","termid":"FYPO:0000840"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal RNA level during meiotic cell cycle","synonyms":[{"name":"normal RNA accumulation during meiotic cell cycle","type":"related"},{"name":"normal cellular RNA level during meiotic cell cycle","type":"exact"},{"name":"normal mRNA level during meiotic cell cycle","type":"narrow"},{"name":"normal transcript level during meiotic cell cycle","type":"exact"}],"termid":"FYPO:0006976"}


id: PBO:0004196
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial single stranded DNA specific 5'-3' exodeoxyribonuclease Exo5 (predicted)","termid":"PBO:0004196"}


id: GO:0018856
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-oxo-3-phenylpropionate + CoA + ATP = AMP + diphosphate + benzoyl acetyl-CoA.","definition_xrefs":["UM-BBD_reactionID:r0242"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CoA-ligase activity","termid":"GO:0016405"},{"relation_name":"is_a","term_name":"acid-thiol ligase activity","termid":"GO:0016878"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016874"],"is_obsolete":false,"name":"benzoyl acetate-CoA ligase activity","secondary_identifiers":["SABIO-RK:5058","KEGG_REACTION:R05452"],"termid":"GO:0018856"}


id: FYPO:0005217
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a proteasome to the nuclear periphery is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to nuclear periphery","termid":"FYPO:0002338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0000138","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"increased proteasome localization to nuclear periphery","synonyms":[{"name":"increased proteasome localisation to nuclear periphery","type":"related"},{"name":"increased proteasome localization to nuclear periphery during mitotic cell cycle","type":"related"},{"name":"increased proteasome localization to nuclear periphery during vegetative growth","type":"exact"}],"termid":"FYPO:0005217"}


id: PBO:0069618
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 895, pseudogene","termid":"PBO:0069618"}


id: PBO:0063463
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"platelet derived growth factor receptor alpha","termid":"PBO:0063463"}


id: GO:0060354
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of cell adhesion molecule production. Cell adhesion molecule production is the appearance of a cell adhesion molecule as a result of its biosynthesis or a decrease in its catabolism.","definition_xrefs":["GOC:rl","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular process","termid":"GO:0048523"},{"relation_name":"is_a","term_name":"regulation of cell adhesion molecule production","termid":"GO:0060353"},{"relation_name":"negatively_regulates","term_name":"cell adhesion molecule production","termid":"GO:0060352"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cell adhesion molecule production","termid":"GO:0060354"}


id: MONDO:0021390
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A polyp that involves the ureter.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyp","termid":"MONDO:0005079"},{"relation_name":"is_a","term_name":"ureter neoplasm","termid":"MONDO:0021111"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polyp of ureter","secondary_identifiers":["SCTID:197821004","ICD9:593.89","icd11.foundation:134277787","NCIT:C4530","MEDGEN:138051","UMLS:C0346269"],"synonyms":[{"name":"polyp of the ureter","type":"exact"},{"name":"ureter polyp","type":"exact"},{"name":"ureteral polyp","type":"exact"}],"termid":"MONDO:0021390","xrefs":{"Monarch":{"xref_id":"0021390"}}}


id: GO:0019419
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the reduction of sulfate to another sulfur-containing ion or compound such as hydrogen sulfide, adenosine-phosphosulfate (APS) or thiosulfate.","definition_xrefs":["MetaCyc:SULFMETII-PWY"],"gene_count":0,"genotype_count":0,"name":"obsolete sulfate reduction (obsolete GO:0019419)","synonyms":[{"name":"assimilatory sulfate reduction","type":"narrow"},{"name":"assimilatory sulphate reduction","type":"narrow"},{"name":"sulfate reduction, APS pathway","type":"narrow"},{"name":"sulphate reduction","type":"exact"},{"name":"sulphate reduction, APS pathway","type":"narrow"}],"termid":"GO:0019419"}


id: PBO:0060538
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-acetyltransferase pseudogene","termid":"PBO:0060538"}


id: PBO:0091608
data:
  {"annotation_feature_type":"gene","cv_name":"cat_act","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KM=63 uM","termid":"PBO:0091608"}


id: MONDO:0013943
data:
  {"annotated_genes":["SJAG_03440"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87594],"is_not":false,"summary":null,"term":"MONDO:0013943"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"peroxisome biogenesis disorder","termid":"MONDO:0019234"},{"relation_name":"is_a","term_name":"peroxisome biogenesis disorder due to PEX16 defect","termid":"MONDO:0100269"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03440":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0019053"},{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0006025","MONDO:0019053","MONDO:0005244","MONDO:0005559"],"is_obsolete":false,"name":"peroxisome biogenesis disorder 8B","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C3553960","GARD:15870","NCIT:C155763","OMIM:614877","DOID:0081437","MEDGEN:766874"],"synonyms":[{"name":"PBD8B","type":"related"},{"name":"peroxisome biogenesis disorder 8B","type":"exact"},{"name":"peroxisome biogenesis disorder type 8B","type":"exact"}],"termid":"MONDO:0013943","terms_by_termid":{"MONDO:0013943":null},"xrefs":{"Monarch":{"xref_id":"0013943"}}}


id: GO:0047163
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3,4-dichloroaniline + malonyl-CoA = N-(3,4-dichlorophenyl)malonamate + CoA.","definition_xrefs":["EC:2.3.1.114","RHEA:21060"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-malonyltransferase activity","termid":"GO:0050735"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674","GO:0016746"],"is_obsolete":false,"name":"3,4-dichloroaniline N-malonyltransferase activity","secondary_identifiers":["MetaCyc:2.3.1.114-RXN","KEGG_REACTION:R04050"],"synonyms":[{"name":"malonyl-CoA:3,4-dichloroaniline N-malonyltransferase activity","type":"related"}],"termid":"GO:0047163"}


id: MONDO:0001765
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"polyneuropathy","termid":"MONDO:0001824"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"polyneuropathy in collagen vascular disease","secondary_identifiers":["ICD9:357.4","MEDGEN:509648","DOID:13649","SCTID:193177003","ICD9:357.1","UMLS:C0154759"],"termid":"MONDO:0001765","xrefs":{"Monarch":{"xref_id":"0001765"}}}


id: MONDO:0010372
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Clark-Baraitser syndrome (obsolete MONDO:0010372)","termid":"MONDO:0010372","xrefs":{"Monarch":{"xref_id":"0010372"}}}


id: MONDO:0024483
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hyperplasia of the transitional epithelium of the urinary tract. Morphologically it is subdivided into flat and papillary hyperplasia. -- 2003","definition_xrefs":["NCIT:C27877"],"direct_ancestors":[{"relation_name":"is_a","term_name":"urinary system disorder","termid":"MONDO:0002118"},{"relation_name":"is_a","term_name":"hyperplasia","termid":"MONDO:0005043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"urothelial hyperplasia","secondary_identifiers":["MEDGEN:234463","UMLS:C1336895"],"synonyms":[{"name":"urothelial hyperplasia","type":"exact"},{"name":"urothelium hyperplasia","type":"exact"}],"termid":"MONDO:0024483","xrefs":{"Monarch":{"xref_id":"0024483"}}}


id: GO:0140990
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process involved in converting precursor piRNAs into non-overlapping, contiguous primary piRNAs (approximately 24-30-nt piRNAs with a preference for a 5' uridine (U) via the endonucleolytic activity of cytosolic PIWI. This may include pre-piRNA maturation of 3' ends by trimming and 2'-O-methylation.","definition_xrefs":["PMID:34469728","PMID:22907665","PMID:26166577"],"direct_ancestors":[{"relation_name":"is_a","term_name":"piRNA processing","termid":"GO:0034587"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"primary piRNA processing","termid":"GO:0140990"}


id: MONDO:0006349
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign, malignant, or borderline neoplasm characterized by the presence of papillary mucinous, serous, or clear cell structures and cystic structures.","definition_xrefs":["NCIT:C4179"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cystic neoplasm","termid":"MONDO:0021077"},{"relation_name":"is_a","term_name":"papillary epithelial neoplasm","termid":"MONDO:0021096"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"papillary cystic neoplasm","secondary_identifiers":["MEDGEN:137749","UMLS:C0334357","EFO:1000448"],"synonyms":[{"name":"papillary cystic neoplasm","type":"exact"},{"name":"papillary cystic tumor","type":"exact"},{"name":"papillary cystic tumour","type":"exact"}],"termid":"MONDO:0006349","xrefs":{"Monarch":{"xref_id":"0006349"}}}


id: PR:P78921
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A T-complex protein 1 subunit theta that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02686","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T-complex protein 1 subunit theta (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC337.05c","secondary_identifiers":["UniProtKB:P78921"],"synonyms":[{"name":"CCT-theta (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-CCT8","type":"exact"},{"name":"TCP-1-theta (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P78921"}


id: MONDO:0021247
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete renal pelvis neoplasm (obsolete MONDO:0021247)","termid":"MONDO:0021247","xrefs":{"Monarch":{"xref_id":"0021247"}}}


id: GO:1900420
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of  alcohol catabolic process within a cell.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of catabolic process","termid":"GO:0009895"},{"relation_name":"is_a","term_name":"negative regulation of small molecule metabolic process","termid":"GO:0062014"},{"relation_name":"is_a","term_name":"regulation of alcohol catabolic process","termid":"GO:1900419"},{"relation_name":"negatively_regulates","term_name":"alcohol catabolic process","termid":"GO:0046164"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"negative regulation of alcohol catabolic process","synonyms":[{"name":"down regulation of cellular alcohol catabolic process","type":"exact"},{"name":"down-regulation of cellular alcohol catabolic process","type":"exact"},{"name":"downregulation of cellular alcohol catabolic process","type":"exact"},{"name":"inhibition of cellular alcohol catabolic process","type":"narrow"}],"termid":"GO:1900420"}


id: MONDO:0005949
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infection with roseolovirus, the most common in humans being exanthema subitum, a benign disease of infants and young children.","definition_xrefs":["MESH:D019349"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary viral infectious disease","termid":"MONDO:0100329"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"roseolovirus infectious disease","secondary_identifiers":["UMLS:C0376549","MEDGEN:83999","EFO:0007474"],"synonyms":[{"name":"Roseolovirus caused disease or disorder","type":"exact"},{"name":"Roseolovirus disease or disorder","type":"exact"},{"name":"Roseolovirus infectious disease","type":"exact"}],"termid":"MONDO:0005949","xrefs":{"Monarch":{"xref_id":"0005949"}}}


id: GO:1903426
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of reactive oxygen species biosynthetic process.","definition_xrefs":["PMID:24252804","GOC:PARL","GO_REF:0000058","GOC:TermGenie","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of biosynthetic process","termid":"GO:0009889"},{"relation_name":"is_a","term_name":"regulation of reactive oxygen species metabolic process","termid":"GO:2000377"},{"relation_name":"regulates","term_name":"reactive oxygen species biosynthetic process","termid":"GO:1903409"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of reactive oxygen species biosynthetic process","synonyms":[{"name":"regulation of ROS formation","type":"related"},{"name":"regulation of ROS generation","type":"related"},{"name":"regulation of reactive oxygen species anabolism","type":"exact"},{"name":"regulation of reactive oxygen species biosynthesis","type":"exact"},{"name":"regulation of reactive oxygen species formation","type":"exact"},{"name":"regulation of reactive oxygen species generation","type":"related"},{"name":"regulation of reactive oxygen species synthesis","type":"exact"}],"termid":"GO:1903426"}


id: GO:0050593
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-N-methylcoclaurine + H+ + NADPH + O2 = (S)-3'-hydroxy-N-methylcoclaurine + H2O + NADP+.","definition_xrefs":["EC:1.14.14.102","RHEA:16649"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"N-methylcoclaurine 3'-monooxygenase activity","secondary_identifiers":["MetaCyc:1.14.13.71-RXN","KEGG_REACTION:R05732"],"synonyms":[{"name":"(S)-N-methylcoclaurine 3'-hydroxylase activity","type":"related"},{"name":"(S)-N-methylcoclaurine,NADPH:oxygen oxidoreductase (3'-hydroxylating)","type":"related"},{"name":"N-methylcoclaurine 3'-hydroxylase activity","type":"exact"},{"name":"cytochrome P450 80B1 activity","type":"related"}],"termid":"GO:0050593"}


id: SO:0001952
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region immediately adjacent to a promoter which may or may not contain transcription factor binding sites.","definition_xrefs":["EBI:nj"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcriptional_cis_regulatory_region","termid":"SO:0001055"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"promoter_flanking_region","synonyms":[{"name":"promoter flanking region","type":"exact"}],"termid":"SO:0001952"}


id: MONDO:1011482
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Beta-mannosidosis that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lysosomal storage disease, dog","termid":"MONDO:1010860"},{"relation_name":"is_a","term_name":"peripheral neuropathy, dog","termid":"MONDO:1011007"},{"relation_name":"is_a","term_name":"beta-mannosidosis, non-human animal","termid":"MONDO:1011432"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"beta-mannosidosis, dog","secondary_identifiers":["OMIA:000626-9615"],"termid":"MONDO:1011482","xrefs":{"Monarch":{"xref_id":"1011482"}}}


id: PBO:0059298
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L47","termid":"PBO:0059298"}


id: GO:0071154
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex formed by the association of the guanine nucleotide exchange factor synembrin with the alpha(i)1 subunit of a heterotrimeric G protein.","definition_xrefs":["PMID:12509430","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"G-protein alpha(i)1-synembrin complex","synonyms":[{"name":"Ric-8A G(i) alpha-1 subunit complex","type":"narrow"},{"name":"Ric-8A G(i) alpha-2 subunit complex","type":"related"}],"termid":"GO:0071154"}


id: PBO:0049027
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 12","termid":"PBO:0049027"}


id: GO:0097322
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a 7SK small nuclear RNA (7SK snRNA).","definition_xrefs":["PMID:21853533","GOC:nhn"],"direct_ancestors":[{"relation_name":"is_a","term_name":"snRNA binding","termid":"GO:0017069"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003723","GO:0003674"],"is_obsolete":false,"name":"7SK snRNA binding","synonyms":[{"name":"7SK small nuclear RNA binding","type":"exact"}],"termid":"GO:0097322"}


id: PBO:0002501
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione S-conjugate-exporting ATPase Abc4","termid":"PBO:0002501"}


id: PBO:0067200
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 265, pseudogene","termid":"PBO:0067200"}


id: _global:existence_ends_during
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"x existence ends during y if and only if the time point at which x ends is before or equivalent to the time point at which y ends and after or equivalent to the point at which y starts. Formally: x existence ends during y iff ω(x) <= ω(y) and ω(x) >= α(y).","direct_ancestors":[{"relation_name":"is_a","term_name":"existence_ends_during_or_before","termid":"_global:existence_ends_during_or_before"},{"relation_name":"is_a","term_name":"existence_overlaps","termid":"_global:existence_overlaps"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"existence_ends_during","secondary_identifiers":["RO:0002492"],"termid":"_global:existence_ends_during"}


id: PBO:0063268
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin beta 14","termid":"PBO:0063268"}


id: GO:0039613
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which a virus stops, prevents, or reduces the frequency, rate or extent of phosphorylation of viral or host proteins in a host.","definition_xrefs":["GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete suppression by virus of host protein phosphorylation (obsolete GO:0039613)","synonyms":[{"name":"viral inhibition of host protein phosphorylation","type":"exact"}],"termid":"GO:0039613"}


id: PBO:0046469
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"erb-b2 receptor tyrosine kinase 3","termid":"PBO:0046469"}


id: MONDO:0019300
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare skin tumor or hamartoma (obsolete MONDO:0019300)","secondary_identifiers":["Orphanet:79386"],"termid":"MONDO:0019300","xrefs":{"Monarch":{"xref_id":"0019300"}}}


id: MONDO:0000834
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A bone structure disease that results in change or damage of structure located in bone.","definition_xrefs":["DOID:0080007"],"gene_count":0,"genotype_count":0,"name":"obsolete bone deterioration disease (obsolete MONDO:0000834)","termid":"MONDO:0000834","xrefs":{"Monarch":{"xref_id":"0000834"}}}


id: PBO:0055511
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2945","termid":"PBO:0055511"}


id: PBO:0058583
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6716","termid":"PBO:0058583"}


id: GO:0048698
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of collateral sprouting in the absence of injury.","definition_xrefs":["GOC:dph","GOC:lm","GOC:dgh","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of collateral sprouting","termid":"GO:0048671"},{"relation_name":"is_a","term_name":"regulation of collateral sprouting in absence of injury","termid":"GO:0048696"},{"relation_name":"negatively_regulates","term_name":"collateral sprouting in absence of injury","termid":"GO:0048669"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of collateral sprouting in absence of injury","synonyms":[{"name":"down regulation of collateral sprouting in the absence of injury","type":"exact"},{"name":"down-regulation of collateral sprouting in the absence of injury","type":"exact"},{"name":"downregulation of collateral sprouting in the absence of injury","type":"exact"},{"name":"inhibition of collateral sprouting in the absence of injury","type":"narrow"}],"termid":"GO:0048698"}


id: GO:0090330
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of platelet aggregation. Platelet aggregation is the adhesion of one platelet to one or more other platelets via adhesion molecules.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of platelet activation","termid":"GO:0010543"},{"relation_name":"is_a","term_name":"regulation of homotypic cell-cell adhesion","termid":"GO:0034110"},{"relation_name":"regulates","term_name":"platelet aggregation","termid":"GO:0070527"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"regulation of platelet aggregation","termid":"GO:0090330"}


id: FYPO:0007532
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which arrested replication forks do not colocalize with nuclear pore complexes (NPCs) longer than actively replicating forks. Normally, arrested replication forks relocate to NPCs as part of replication fork processing, and remain anchored at NPCs while recombination-dependent replication takes place.","definition_xrefs":["PomBase:mah","PMID:33159083"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal replication fork processing","termid":"FYPO:0003586"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000293","FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"decreased replication fork colocalization with nuclear pore complex","synonyms":[{"name":"decreased replication fork colocalization with NPC","type":"exact"},{"name":"decreased replication fork colocalization with nuclear pore","type":"exact"},{"name":"decreased replication fork colocalization with nuclear pore complex during mitotic S phase","type":"exact"},{"name":"decreased replication fork colocalization with nuclear pore complex during mitotic cell cycle","type":"related"},{"name":"decreased replication fork colocalization with nuclear pore complex during vegetative growth","type":"exact"},{"name":"decreased replication fork relocation to nuclear pore complex","type":"exact"},{"name":"decreased replication fork relocation to nuclear pore complex during mitotic S phase","type":"exact"},{"name":"reduced replication fork colocalization with nuclear pore complex","type":"exact"}],"termid":"FYPO:0007532"}


id: PBO:0073942
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 18 member B1","termid":"PBO:0073942"}


id: PBO:0050040
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major histocompatibility complex, class II, DR beta 8 (pseudogene)","termid":"PBO:0050040"}


id: PBO:0002976
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GRAM domain","termid":"PBO:0002976"}


id: GO:0071867
data:
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id: GO:0048912
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The movement of a glial cell along the axons in the anterior lateral line nerve.","definition_xrefs":["PMID:12062041"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lateral line nerve glial cell migration","termid":"GO:0048896"},{"relation_name":"part_of","term_name":"anterior lateral line nerve development","termid":"GO:0048909"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glial cell migration in anterior lateral line nerve","termid":"GO:0048912"}


id: MONDO:0016112
data:
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id: PBO:0071012
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 14","termid":"PBO:0071012"}


id: MONDO:0100122
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autosomal recessive mucolipidosis disorder caused by bi-allelic variants in the GNPTAB gene. Symptoms of this condition occur across a clinical spectrum including mucolipidosis type II (ML II) and mucolipidosis type III alpha/beta (ML IIIα/β), and phenotypes intermediate between ML II and ML IIIα/β.","definition_xrefs":["PMID:32651481","PMID:20301728"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mucolipidosis","termid":"MONDO:0019248"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002561"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0002561","MONDO:0005066"],"is_obsolete":false,"name":"GNPTAB-mucolipidosis","synonyms":[{"name":"GNPTAB-related disorder","type":"exact"},{"name":"UDP-N-acetylglucosamine-1-phosphotransferase subunit alpha/beta deficiency","type":"exact"}],"termid":"MONDO:0100122","xrefs":{"Monarch":{"xref_id":"0100122"}}}


id: PBO:0061460
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NOTCH regulated ankyrin repeat protein","termid":"PBO:0061460"}


id: PBO:0056222
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAGE family member D2","termid":"PBO:0056222"}


id: GO:0048518
data:
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id: PBO:0049619
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id: GO:0042301
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id: PR:Q10214
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id: PBO:0049190
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id: GO:0047048
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id: PBO:0016549
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id: GO:0045188
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id: PBO:0084260
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id: PBO:0065342
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id: MOD:00002
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id: PBO:0059165
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id: GO:0031360
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id: PBO:0041423
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id: PBO:0041052
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id: PBO:0058578
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id: PBO:0004808
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id: PBO:0083533
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified ORF TIM13/YGR181W","termid":"PBO:0083533"}


id: PR:Q96WW2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug93 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q96WW2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 93 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC32H8.06","synonyms":[{"name":"Spom972h-mug93","type":"exact"}],"termid":"PR:Q96WW2"}


id: MONDO:0019309
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Late-onset junctional epidermolysis bullosa is a subtype of junctional epidermolysis bullosa (JEB) occurring in childhood or young adulthood.","definition_xrefs":["Orphanet:79406"],"direct_ancestors":[{"relation_name":"is_a","term_name":"junctional epidermolysis bullosa","termid":"MONDO:0017612"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"late-onset junctional epidermolysis bullosa","secondary_identifiers":["UMLS:C4304724","MEDGEN:930393","SCTID:719432000","GARD:12921"],"synonyms":[{"name":"EB progressive","type":"exact"},{"name":"JEB-lo","type":"exact"}],"termid":"MONDO:0019309","xrefs":{"Monarch":{"xref_id":"0019309"}}}


id: MONDO:0009625
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"diencephalic-mesencephalic junction dysplasia","termid":"MONDO:0017868"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diencephalic-mesencephalic junction dysplasia syndrome 1","secondary_identifiers":["UMLS:C4538630","GARD:8510","OMIM:251280","MESH:C537546","MEDGEN:1615973"],"synonyms":[{"name":"DMJDS1","type":"exact"},{"name":"MISSBC","type":"related"},{"name":"microcephaly with spastic quadriplegia","type":"exact"},{"name":"microcephaly, seizures, spasticity, and brain calcifications","type":"related"},{"name":"recessive microcephaly with spastic quadriplegia","type":"related"}],"termid":"MONDO:0009625","xrefs":{"Monarch":{"xref_id":"0009625"}}}


id: FYPO:0005222
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of histone H3 to chromatin at one or more protein-coding genes is decreased.","definition_xrefs":["PomBase:mah","PMID:23028377"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to chromatin during vegetative growth","termid":"FYPO:0000452"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0000138"],"is_obsolete":false,"name":"decreased histone H3 localization to chromatin at protein coding gene","synonyms":[{"name":"decreased histone H3 localisation to chromatin at protein coding gene","type":"exact"},{"name":"decreased histone H3 localization to chromatin at protein coding gene during mitotic cell cycle","type":"related"},{"name":"decreased histone H3 localization to chromatin at protein-coding gene during vegetative growth","type":"exact"},{"name":"reduced histone H3 localization to chromatin at protein coding gene","type":"exact"}],"termid":"FYPO:0005222"}


id: FYPO:0001588
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the import of lysine into the cell occurs to a lower extent than normal when the cell is subject to nitrogen starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased lysine import","termid":"FYPO:0001650"},{"relation_name":"is_a","term_name":"abnormal lysine import during nitrogen starvation","termid":"FYPO:0001652"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0000138","FYPO:0005447"],"is_obsolete":false,"name":"decreased lysine import during nitrogen starvation","synonyms":[{"name":"decreased L-lysine import across plasma membrane during nitrogen starvation","type":"exact"},{"name":"decreased L-lysine import during nitrogen starvation","type":"exact"},{"name":"decreased lysine import during nitrogen depletion","type":"exact"},{"name":"decreased lysine import during nitrogen deprivation","type":"exact"},{"name":"decreased lysine import into cell during nitrogen starvation","type":"exact"},{"name":"decreased lysine transport into cell during nitrogen starvation","type":"exact"},{"name":"decreased lysine uptake during nitrogen starvation","type":"exact"},{"name":"reduced lysine import during nitrogen starvation","type":"exact"}],"termid":"FYPO:0001588"}


id: PBO:0042831
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centrin 4, pseudogene","termid":"PBO:0042831"}


id: GO:0019791
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete FAT10 hydrolase activity (obsolete GO:0019791)","synonyms":[{"name":"FAT10 hydrolase activity","type":"exact"}],"termid":"GO:0019791"}


id: GO:0120537
data:
  {"annotated_genes":["SJAG_04642"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[115254],"is_not":false,"summary":null,"term":"GO:0120537"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a 3-demethylubiquinone + S-adenosyl-L-methionine = a ubiquinone + S-adenosyl-L-homocysteine.","definition_xrefs":["PMID:38425362","RHEA:81215"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-methyltransferase activity","termid":"GO:0008171"},{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04642":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0003674","GO:0016741","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"3-demethylubiquinone 3-O-methyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0120537","terms_by_termid":{"GO:0120537":null}}


id: GO:0071512
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a MAP kinase to the nucleus that occurs in the context of conjugation with cellular fusion.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete MAPK import into nucleus involved in conjugation with cellular fusion (obsolete GO:0071512)","synonyms":[{"name":"MAPK import into nucleus involved in mating response","type":"related"},{"name":"conjugation with cellular fusion, MAPK import into nucleus","type":"exact"},{"name":"conjugation with cellular fusion, nuclear translocation of MAPK","type":"narrow"},{"name":"nuclear translocation of MAPK involved in conjugation with cellular fusion","type":"narrow"},{"name":"nuclear translocation of MAPK involved in mating response","type":"related"}],"termid":"GO:0071512"}


id: GO:0018694
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 H+ + O2 + p-cymene + 2 reduced [2Fe-2S]-[ferredoxin] = 4-isopropylbenzyl alcohol + H2O + 2 oxidized [2Fe-2S]-[ferredoxin].","definition_xrefs":["RHEA:51604"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced iron-sulfur protein as one donor, and incorporation of one atom of oxygen","termid":"GO:0016713"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"p-cymene methyl hydroxylase activity","secondary_identifiers":["EC:1.14.15.25","MetaCyc:RXN-661","UM-BBD_reactionID:r0392"],"termid":"GO:0018694"}


id: PR:O00103
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ubc11 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O00103"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-conjugating enzyme E2-20 kDa (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1259.15c","synonyms":[{"name":"E2 ubiquitin-conjugating enzyme 11 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ubc11","type":"exact"},{"name":"ubiquitin carrier protein (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ubiquitin-protein ligase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O00103"}


id: PBO:0044718
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD/H-box helicase 11 like 5 (pseudogene)","termid":"PBO:0044718"}


id: MONDO:0008662
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autosomal dominant vitreoretinochoroidopathy (ADVIRC) is a genetic vitreous-retinal disease characterized by ocular developmental anomalies such as microcornea, a shallow anterior chamber, glaucoma and cataract. Abnormal chorioretinal pigmentation is present, usually lying between the vortex veins and the ora serrata for 360 degrees.","definition_xrefs":["Orphanet:3086"],"direct_ancestors":[{"relation_name":"is_a","term_name":"BEST1-related vitreoretinochoroidopathy","termid":"MONDO:0700240"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"autosomal dominant vitreoretinochoroidopathy","secondary_identifiers":["DOID:0111569","SCTID:711162004","MEDGEN:854768","UMLS:C3888099","ICD10CM:H35.5","MESH:C536352","GARD:5507","OMIM:193220","icd11.foundation:96951767"],"synonyms":[{"name":"ADVIRC","type":"exact"},{"name":"VRCP","type":"related"},{"name":"VRCP autosomal dominant","type":"related"},{"name":"microcornea, Rod-cone dystrophy, cataract, and posterior staphyloma","type":"related"},{"name":"vitreoretinochoroidopathy","type":"related"},{"name":"vitreoretinochoroidopathy dominant","type":"related"},{"name":"vitreoretinochoroidopathy with microcornea, glaucoma, and cataract","type":"related"},{"name":"vitreoretinochoroidopathy, autosomal dominant","type":"related"},{"name":"vitreoretinochoroidopathy, autosomal dominant, with nanophthalmos","type":"related"}],"termid":"MONDO:0008662","xrefs":{"Monarch":{"xref_id":"0008662"}}}


id: PBO:0083253
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; identified by sequence comparison with hemiascomycetous yeast species","termid":"PBO:0083253"}


id: PBO:0059324
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L57 pseudogene 9","termid":"PBO:0059324"}


id: MONDO:0004417
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"infiltrating bladder urothelial carcinoma","termid":"MONDO:0003890"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"nested variant infiltrating bladder urothelial carcinoma","secondary_identifiers":["DOID:7969","NCIT:C39819","UMLS:C1512741","MEDGEN:268575"],"synonyms":[{"name":"infiltrating bladder urothelial carcinoma, nested variant","type":"exact"}],"termid":"MONDO:0004417","xrefs":{"Monarch":{"xref_id":"0004417"}}}


id: GO:0055056
data:
  {"annotated_genes":["SJAG_02719","SJAG_03608"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[64937],"is_not":false,"summary":null,"term":"GO:0055056"},{"annotations":[114560],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140108"},{"annotations":[117595],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005358"}]},"cv_name":"molecular_function","definition":"Enables the transfer of the D-enantiomer of the hexose monosaccharide glucose from one side of a membrane to the other.","definition_xrefs":["GOC:mah","GOC:jid","GOC:jsg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexose transmembrane transporter activity","termid":"GO:0015149"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02719":null,"SJAG_03608":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"D-glucose transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000104":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-5632804","Reactome:R-HSA-450095","Reactome:R-HSA-429094","Reactome:R-HSA-5339524","Reactome:R-HSA-8981553","Reactome:R-HSA-8981574","GO:0015579","Reactome:R-HSA-8981564","Reactome:R-HSA-5632871","Reactome:R-HSA-8981570"],"termid":"GO:0055056","terms_by_termid":{"GO:0005358":null,"GO:0055056":null,"GO:0140108":null}}


id: PBO:0055350
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2779","termid":"PBO:0055350"}


id: PBO:0090158
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial fission protein Fis1","termid":"PBO:0090158"}


id: PBO:0092024
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA Glutamine (uug), mitochondrial","termid":"PBO:0092024"}


id: PBO:0111768
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNARE","termid":"PBO:0111768"}


id: MONDO:0000990
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acute form of subendocardial myocardial infarction.","definition_xrefs":["MONDO:patterns/acute"],"direct_ancestors":[{"relation_name":"is_a","term_name":"subendocardial myocardial infarction","termid":"MONDO:0003674"},{"relation_name":"is_a","term_name":"acute myocardial infarction","termid":"MONDO:0004781"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"acute subendocardial myocardial infarction","secondary_identifiers":["SCTID:70422006","DOID:10266","ICD9:410.72","ICD9:410.71","UMLS:C0264710","ICD9:410.70","ICD9:410.7","MEDGEN:538778"],"synonyms":[{"name":"acute nontransmural infarction","type":"related"},{"name":"acute subendocardial infarction","type":"exact"},{"name":"subendocardial infarction acute myocardial infarction","type":"related"},{"name":"subendocardial myocardial infarction, acute","type":"exact"}],"termid":"MONDO:0000990","xrefs":{"Monarch":{"xref_id":"0000990"}}}


id: PBO:0079735
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBX domain protein 1","termid":"PBO:0079735"}


id: GO:0047475
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + CoA + phenylacetate = AMP + diphosphate + H+ + phenylacetyl-CoA.","definition_xrefs":["RHEA:20956"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CoA-ligase activity","termid":"GO:0016405"},{"relation_name":"is_a","term_name":"acid-thiol ligase activity","termid":"GO:0016878"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016874","GO:0003824"],"is_obsolete":false,"name":"phenylacetate-CoA ligase activity","secondary_identifiers":["EC:6.2.1.30","MetaCyc:RXN-10819","KEGG_REACTION:R02539"],"synonyms":[{"name":"PA-CoA ligase activity","type":"related"},{"name":"phenacyl coenzyme A synthetase activity","type":"related"},{"name":"phenylacetate:CoA ligase (AMP-forming)","type":"related"},{"name":"phenylacetyl-CoA ligase (AMP-forming)","type":"related"},{"name":"phenylacetyl-CoA ligase activity","type":"related"}],"termid":"GO:0047475"}


id: PBO:0080730
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WWC2 antisense RNA 2","termid":"PBO:0080730"}


id: PBO:0069406
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 666, pseudogene","termid":"PBO:0069406"}


id: MONDO:0056804
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system organ benign neoplasm","termid":"MONDO:0000628"},{"relation_name":"is_a","term_name":"peripheral nervous system neoplasm","termid":"MONDO:0001406"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benign neoplasm of peripheral nervous system","secondary_identifiers":["MEDGEN:199653","DOID:0080320","UMLS:C0751427"],"termid":"MONDO:0056804","xrefs":{"Monarch":{"xref_id":"0056804"}}}


id: GO:1905442
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a chondroitin 4'-sulfate stimulus.","definition_xrefs":["GO_REF:0000071","GOC:TermGenie","PMID:22365850"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to nitrogen compound","termid":"GO:1901699"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"},{"relation_name":"is_a","term_name":"response to chondroitin 4'-sulfate","termid":"GO:1905441"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to chondroitin 4'-sulfate","termid":"GO:1905442"}


id: MONDO:0001823
data:
  {"annotated_genes":["SJAG_03081"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86726],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0859173"}]},"cv_name":"mondo","definition":"A constellation of signs and symptoms which may include syncope, fatigue, dizziness, and alternating periods of bradycardia and atrial tachycardia, which is caused by sinoatrial node dysfunction.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sinoatrial node disorder","termid":"MONDO:0000469"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03081":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"sick sinus syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NANDO:2200212","UMLS:C0037052","NANDO:2100043","SCTID:36083008","NCIT:C62244","icd11.foundation:1682594333","DOID:13884","MEDGEN:20749","ICD10CM:I49.5","MESH:D012804"],"synonyms":[{"name":"SSS","type":"exact"},{"name":"sinus node infection","type":"exact"}],"termid":"MONDO:0001823","terms_by_termid":{"MONDO:0859173":null},"xrefs":{"Monarch":{"xref_id":"0001823"}}}


id: PBO:0000256
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protoporphyrinogen oxidase (predicted)","termid":"PBO:0000256"}


id: PBO:0001091
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V-type ATPase V1 domain, subunit A","termid":"PBO:0001091"}


id: PBO:0049059
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 65","termid":"PBO:0049059"}


id: GO:0008788
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: alpha,alpha-trehalose 6-phosphate + H2O = D-glucose + D-glucose 6-phosphate.","definition_xrefs":["EC:3.2.1.93"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trehalase activity","termid":"GO:0015927"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0003824","GO:0016798"],"is_obsolete":false,"name":"alpha,alpha-phosphotrehalase activity","secondary_identifiers":["MetaCyc:TRE6PHYDRO-RXN","RHEA:23008"],"synonyms":[{"name":"alpha,alpha-trehalose-6-phosphate phosphoglucohydrolase activity","type":"related"},{"name":"phosphotrehalase activity","type":"related"},{"name":"trehalose-6-phosphate hydrolase activity","type":"related"}],"termid":"GO:0008788"}


id: PBO:0033810
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_DNA_recombination_at_telomere_during_nitrogen_starvation","termid":"PBO:0033810"}


id: MONDO:0034976
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"acquired Creutzfeldt-Jakob disease","termid":"MONDO:0018686"},{"relation_name":"is_a","term_name":"nosocomial infection","termid":"MONDO:0043544"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iatrogenic Creutzfeldt-Jakob disease","secondary_identifiers":["Orphanet:576379","icd11.foundation:437591130","GARD:22329","NANDO:1200193","MEDGEN:908476","UMLS:C2349757"],"termid":"MONDO:0034976","xrefs":{"Monarch":{"xref_id":"0034976"}}}


id: PR:Q6E434
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tbf1 gene.","definition_xrefs":["UniProtKB:Q6E434","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"telomeric DNA-binding factor trf1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC19G7.13","synonyms":[{"name":"Spom972h-tbf1","type":"exact"}],"termid":"PR:Q6E434"}


id: GO:0098807
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that is part of a chloroplast thylakoid membrane.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"part_of","term_name":"chloroplast thylakoid membrane","termid":"GO:0009535"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005737","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"chloroplast thylakoid membrane protein complex","termid":"GO:0098807"}


id: GO:0010713
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of the chemical reactions and pathways resulting in the metabolism of collagen, any of a group of fibrous proteins of very high tensile strength that form the main component of connective tissue in animals.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of metabolic process","termid":"GO:0009892"},{"relation_name":"is_a","term_name":"regulation of collagen metabolic process","termid":"GO:0010712"},{"relation_name":"negatively_regulates","term_name":"collagen metabolic process","termid":"GO:0032963"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of collagen metabolic process","termid":"GO:0010713"}


id: PBO:0025487
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arginase deficiency","termid":"PBO:0025487"}


id: FYPO:0008307
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a cell divides with a smaller diameter than normal (i.e. compared to wild-type cells under the same conditions).","definition_xrefs":["PomBase:pc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viable thin vegetative cell","termid":"FYPO:0001877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000005","FYPO:0001985","FYPO:0000002","FYPO:0000004"],"is_obsolete":false,"name":"decreased cell diameter at division","termid":"FYPO:0008307"}


id: MOD:01243
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a C-terminal residue to the potassium carboxylate salt.","definition_xrefs":["Unimod:530#C-term"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monopotassium salt","termid":"MOD:01072"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium carboxylate C-terminal residue","synonyms":[{"name":"Cation:K","type":"related"},{"name":"Replacement of proton by potassium","type":"related"}],"termid":"MOD:01243"}


id: PBO:0030321
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_palmitoyl-CoA_ligase_activity","termid":"PBO:0030321"}


id: PBO:0054660
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2066","termid":"PBO:0054660"}


id: PBO:0052986
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leukocyte associated immunoglobulin like receptor 1","termid":"PBO:0052986"}


id: MONDO:0008170
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A primary or metastatic malignant neoplasm involving the ovary. Most primary malignant ovarian neoplasms are either carcinomas (serous, mucinous, or endometrioid adenocarcinomas) or malignant germ cell tumors. Metastatic malignant neoplasms to the ovary include carcinomas, lymphomas, and melanomas.","definition_xrefs":["NCIT:C7431"],"direct_ancestors":[{"relation_name":"is_a","term_name":"female reproductive organ cancer","termid":"MONDO:0001416"},{"relation_name":"is_a","term_name":"ovarian neoplasm","termid":"MONDO:0021068"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"ovarian cancer","secondary_identifiers":["DOID:2394","SCTID:363443007","OMIM:167000","MEDGEN:216027","ICD9:183.0","GARD:7295","MESH:D010051","Orphanet:213500","icd11.foundation:685124533","UMLS:C1140680"],"synonyms":[{"name":"cancer of ovary","type":"exact"},{"name":"cancer of the ovary","type":"exact"},{"name":"malignant neoplasm of ovary","type":"exact"},{"name":"malignant neoplasm of the ovary","type":"exact"},{"name":"malignant ovarian neoplasm","type":"exact"},{"name":"malignant ovarian tumor","type":"exact"},{"name":"malignant ovarian tumour","type":"exact"},{"name":"malignant ovary neoplasm","type":"exact"},{"name":"malignant tumor of ovary","type":"exact"},{"name":"malignant tumor of the ovary","type":"exact"},{"name":"malignant tumour of ovary","type":"exact"},{"name":"malignant tumour of the ovary","type":"exact"},{"name":"ovarian cancer","type":"exact"},{"name":"ovarian cancer, epithelial","type":"related"},{"name":"ovarian cancer, somatic","type":"exact"},{"name":"ovarian malignant tumor","type":"exact"},{"name":"ovarian malignant tumour","type":"exact"},{"name":"ovarian neoplasm","type":"broad"},{"name":"ovary cancer","type":"exact"},{"name":"ovary neoplasm","type":"broad"},{"name":"primary ovarian cancer","type":"related"},{"name":"tumor of the ovary","type":"broad"},{"name":"tumour of the ovary","type":"broad"}],"termid":"MONDO:0008170","xrefs":{"Monarch":{"xref_id":"0008170"}}}


id: GO:0046337
data:
  {"annotated_genes":["SJAG_02902","SJAG_01918","SJAG_04628","SJAG_02980","SJAG_04792","SJAG_03524","SJAG_01233","SJAG_04319"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[73930,104339,71436,67485,75753,62213,93424,79510],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006646"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving phosphatidylethanolamine, any of a class of glycerophospholipids in which a phosphatidyl group is esterified to the hydroxyl group of ethanolamine. It is a major structural phospholipid in mammalian systems. It tends to be more abundant than phosphatidylcholine in the internal membranes of the cell and is an abundant component of prokaryotic membranes.","definition_xrefs":["ISBN:0198506732","GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycerophospholipid metabolic process","termid":"GO:0006650"}],"gene_count":8,"genes_by_uniquename":{"SJAG_01233":null,"SJAG_01918":null,"SJAG_02902":null,"SJAG_02980":null,"SJAG_03524":null,"SJAG_04319":null,"SJAG_04628":null,"SJAG_04792":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"phosphatidylethanolamine metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000107":null},"synonyms":[{"name":"phosphatidylethanolamine metabolism","type":"exact"}],"termid":"GO:0046337","terms_by_termid":{"GO:0006646":null}}


id: PBO:0087487
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of COMPASS (Set1C); a complex which methylates histone H3 on lysine 4 and is required in telomeric transcriptional silencing; promotes meiotic DSB formation by interacting with H3K4me3 and Rec107p, a protein required for Spo11p-catalyzed DSB formation located on chromosome axes; interacts with Orc2p; PHD finger domain protein similar to human CGBP, an unmethylated CpG binding protein; relocalizes to cytosol in response to hypoxia","termid":"PBO:0087487"}


id: GO:1905748
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process by which a hard palate is generated and organized.","definition_xrefs":["GO_REF:0000083","GOC:TermGenie","PMID:23419067"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hard palate morphogenesis","synonyms":[{"name":"palatum durum morphogenesis","type":"exact"}],"termid":"GO:1905748"}


id: PBO:0113010
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase subunit of imitation-switch (ISWI) class chromatin remodelers; with Ioc3p forms Isw1a complex involved in repression of transcription initiation; with Ioc2p and Ioc4p forms Isw1b complex involved in regulation of transcription elongation; Isw1b recruited to ORFs by H3K36 methylation and acts with Chd1p to prevent trans-histone exchange over coding regions; binds to 3'UTR of HAC1 mRNA and limits its nuclear export attenuating the UPR","termid":"PBO:0113010"}


id: PBO:0026780
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_RNA_level_during_cellular_response_to_salt_stress","termid":"PBO:0026780"}


id: PBO:0116994
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GRK5 antisense RNA 1","termid":"PBO:0116994"}


id: FYPO:0000414
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype in which plasma membrane fusion involved in cytogamy is decreased.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete decreased cell fusion during mating (obsolete FYPO:0000414)","synonyms":[{"name":"cell fusion: decreased","type":"related"},{"name":"decreased cell fusion during conjugation","type":"exact"},{"name":"decreased plasma membrane fusion involved in cytogamy","type":"exact"},{"name":"reduced cell fusion during mating","type":"exact"}],"termid":"FYPO:0000414"}


id: GO:0034590
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of L-hydroxyproline from one side of a membrane to the other.","definition_xrefs":["PMID:14502423","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid transmembrane transporter activity","termid":"GO:0008028"},{"relation_name":"is_a","term_name":"L-amino acid transmembrane transporter activity","termid":"GO:0015179"},{"relation_name":"is_a","term_name":"modified amino acid transmembrane transporter activity","termid":"GO:0072349"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"L-hydroxyproline transmembrane transporter activity","secondary_identifiers":["Reactome:R-HSA-6784213"],"synonyms":[{"name":"4-hydroxyproline transmembrane transporter activity","type":"broad"}],"termid":"GO:0034590"}


id: GO:0009679
data:
  {"annotated_genes":["SJAG_03608"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[117595],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005358"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: hexose(out) + H+(out) = hexose(in) + H+(in).","definition_xrefs":["TC:2.A.1.-.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate:proton symporter activity","termid":"GO:0005351"},{"relation_name":"is_a","term_name":"hexose transmembrane transporter activity","termid":"GO:0015149"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03608":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"hexose:proton symporter activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"hexose:hydrogen symporter activity","type":"exact"}],"termid":"GO:0009679","terms_by_termid":{"GO:0005358":null}}


id: PBO:0059613
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ATP6 pseudogene 25","termid":"PBO:0059613"}


id: GO:0018599
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2-hydroxyisobutyrate + 1/2 O2 = 2,3-dihydroxy-2-methyl propionate.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 2-hydroxyisobutyrate 3-monooxygenase activity (obsolete GO:0018599)","termid":"GO:0018599"}


id: MONDO:0013557
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Hermansky-Pudlak syndrome in which the cause of the disease is a mutation in the HPS5 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Hermansky-Pudlak syndrome without pulmonary fibrosis","termid":"MONDO:0016502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005093","MONDO:0005066"],"is_obsolete":false,"name":"Hermansky-Pudlak syndrome 5","secondary_identifiers":["GARD:18334","DOID:0060543","OMIM:614074","MEDGEN:854711","UMLS:C3888004"],"synonyms":[{"name":"HPS5","type":"related"},{"name":"HPS5 Hermansky-Pudlak syndrome","type":"exact"},{"name":"Hermansky-Pudlak syndrome 5","type":"exact"},{"name":"Hermansky-Pudlak syndrome caused by mutation in HPS5","type":"exact"},{"name":"Hermansky-Pudlak syndrome type 5","type":"exact"}],"termid":"MONDO:0013557","xrefs":{"Monarch":{"xref_id":"0013557"}}}


id: MOD:01002
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:92"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DeltaMass","termid":"MOD:00947"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gamma-aminobutyryl","termid":"MOD:01002"}


id: PBO:0060450
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-N-acetylgalactosaminidase","termid":"PBO:0060450"}


id: GO:0102341
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: (R)-3-hydroxylignoceroyl-CoA + NADP = 3-oxotetracosanoyl-CoA + NADPH + H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 3-oxo-lignoceroyl-CoA reductase activity (obsolete GO:0102341)","termid":"GO:0102341"}


id: MONDO:0005244
data:
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id: GO:0072689
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form an MCM complex, a hexameric protein complex required for the initiation and regulation of DNA replication.","definition_xrefs":["GOC:mah","PMID:21813639"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0008150","GO:0065003","GO:0044085"],"is_obsolete":false,"name":"MCM complex assembly","termid":"GO:0072689"}


id: PBO:0059464
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mutS homolog 3","termid":"PBO:0059464"}


id: PBO:0087873
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcriptional modulator; involved in regulation of meiosis, silencing, and expression of RNR genes; acts as a nuclear anchor to retain the ribonucleotide reductase small subunit heterodimer, Rnr2p-Rnr4p, in the nucleus when cells are not in S phase; contains WD repeats","termid":"PBO:0087873"}


id: PBO:0091668
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WW domain containing conserved fungal protein Wwm2","termid":"PBO:0091668"}


id: PBO:0091587
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyoxylase III Sdj1","termid":"PBO:0091587"}


id: GO:0015421
data:
  {"annotated_genes":["SJAG_02602"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[76006],"is_not":false,"summary":null,"term":"GO:0015421"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + H2O + oligopeptide(out) = ADP + phosphate + oligopeptide(in).","definition_xrefs":["RHEA:14429"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligopeptide transmembrane transporter activity","termid":"GO:0035673"},{"relation_name":"is_a","term_name":"ABC-type transporter activity","termid":"GO:0140359"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02602":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"ABC-type oligopeptide transporter activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-5223317","EC:7.4.2.6","MetaCyc:3.6.3.23-RXN"],"synonyms":[{"name":"ABC-type oligopeptide transporter","type":"exact"},{"name":"ATP-dependent oligopeptide transmembrane transporter activity","type":"exact"},{"name":"ATPase-coupled oligopeptide transmembrane transporter activity","type":"related"},{"name":"oligopeptide ABC transporter","type":"narrow"},{"name":"oligopeptide permease activity","type":"related"},{"name":"oligopeptide-transporting ATPase activity","type":"related"}],"termid":"GO:0015421","terms_by_termid":{"GO:0015421":null}}


id: GO:0060132
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a prolactin secreting cell over time, from its formation to the mature structure. A prolactin secreting cell is an acidophilic cell of the anterior pituitary that produces prolactin.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell development","termid":"GO:0048468"},{"relation_name":"part_of","term_name":"prolactin secreting cell differentiation","termid":"GO:0060127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"prolactin secreting cell development","synonyms":[{"name":"epsilon-acidophil development","type":"exact"},{"name":"lactotrope development","type":"exact"},{"name":"lactotroph development","type":"exact"},{"name":"lactotropic cell development","type":"exact"},{"name":"mammotrope development","type":"exact"},{"name":"mammotroph development","type":"exact"},{"name":"mammotrophic cell development","type":"exact"},{"name":"mammotropic cell development","type":"exact"}],"termid":"GO:0060132"}


id: PBO:0058454
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5093","termid":"PBO:0058454"}


id: PBO:0063676
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piggyBac transposable element derived 4","termid":"PBO:0063676"}


id: MONDO:0958332
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary neuromuscular disease","termid":"MONDO:0100546"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuromuscular disorder, congenital, with dysmorphic facies","secondary_identifiers":["OMIM:620775","UMLS:C5935643","MEDGEN:1857169"],"termid":"MONDO:0958332","xrefs":{"Monarch":{"xref_id":"0958332"}}}


id: PBO:0044928
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diacylglycerol kinase gamma","termid":"PBO:0044928"}


id: PBO:0001230
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleolar protein required for rRNA processing","termid":"PBO:0001230"}


id: PBO:0034489
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_reverse_centromeric_outer_repeat_transcript_level","termid":"PBO:0034489"}


id: GO:0048904
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the anterior lateral line neuromast cupula over time, from its formation to the mature structure. The cupula is secreted by mantle cells and the ciliary bundles of all of the hair cells of the neuromast are embedded in it. The cupula provides a mechanical linkage between the hair cells and the external hydrodynamic environment. The cupula of superficial neuromasts grows continuously, while the height of the cupula of canal neuromasts is limited by canal diameter.","definition_xrefs":["ISBN:0125296509"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cupula development","termid":"GO:0048887"},{"relation_name":"part_of","term_name":"anterior lateral line neuromast development","termid":"GO:0048901"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anterior lateral line neuromast cupula development","termid":"GO:0048904"}


id: MONDO:0006467
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rapidly growing primary carcinoma of the thyroid gland composed of malignant squamous cells. The clinical course is usually aggressive.","definition_xrefs":["NCIT:C46008"],"direct_ancestors":[{"relation_name":"is_a","term_name":"squamous cell carcinoma","termid":"MONDO:0005096"},{"relation_name":"is_a","term_name":"thyroid gland carcinoma","termid":"MONDO:0015075"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"thyroid gland squamous cell carcinoma","secondary_identifiers":["UMLS:C1710177","MEDGEN:328050","EFO:1000594"],"synonyms":[{"name":"squamous cell thyroid gland carcinoma","type":"exact"},{"name":"thyroid gland squamous cell carcinoma","type":"exact"}],"termid":"MONDO:0006467","xrefs":{"Monarch":{"xref_id":"0006467"}}}


id: PBO:0088638
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor TFIID complex subunit Taf4","termid":"PBO:0088638"}


id: PBO:0074604
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 11E","termid":"PBO:0074604"}


id: GO:0010717
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of epithelial to mesenchymal transition. Epithelial to mesenchymal transition where an epithelial cell loses apical/basolateral polarity, severs intercellular adhesive junctions, degrades basement membrane components and becomes a migratory mesenchymal cell.","definition_xrefs":["GOC:BHF","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell differentiation","termid":"GO:0045595"},{"relation_name":"regulates","term_name":"epithelial to mesenchymal transition","termid":"GO:0001837"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of epithelial to mesenchymal transition","termid":"GO:0010717"}


id: MOD:01506
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom of a residue with the Applied Biosystems iTRAQ4plex-117 reporter+balance group.","definition_xrefs":["Unimod:889","Unimod:214"],"direct_ancestors":[{"relation_name":"is_a","term_name":"(13)C isotope tagged reagent","termid":"MOD:01428"},{"relation_name":"is_a","term_name":"(15)N isotope tagged reagent","termid":"MOD:01429"},{"relation_name":"is_a","term_name":"modifications with monoisotopic mass differences that are nominally equal at 144.102062 Da","termid":"MOD:01517"},{"relation_name":"is_a","term_name":"iTRAQ4plex reporter+balance reagent acylated residue","termid":"MOD:01518"},{"relation_name":"is_a","term_name":"mTRAQ reporter+balance reagent acylated residue","termid":"MOD:01863"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iTRAQ4plex-117, mTRAQ heavy, reporter+balance reagent acylated residue","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"},{"name":"Applied Biosystems iTRAQ(TM) multiplexed quantitation chemistry","type":"related"},{"name":"Applied Biosystems mTRAQ(TM) reagent","type":"related"},{"name":"Representative mass and accurate mass for 116 & 117","type":"related"},{"name":"iTRAQ","type":"related"},{"name":"iTRAQ4plex","type":"related"},{"name":"mTRAQ heavy","type":"related"}],"termid":"MOD:01506"}


id: PBO:0063189
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prostate cancer associated transcript 1","termid":"PBO:0063189"}


id: PBO:0068758
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U5F small nuclear 3, pseudogene","termid":"PBO:0068758"}


id: PBO:0062582
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 10 subfamily G member 6","termid":"PBO:0062582"}


id: RO:0002222
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"temporally_related_to","termid":"RO:0002222"}


id: PBO:0076269
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synapse associated protein 1","termid":"PBO:0076269"}


id: PR:Q9US47
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A succinate-semialdehyde dehydrogenase, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR11699:SF49","OMA:SCHPO00746","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"succinate-semialdehyde dehydrogenase C1002.12c [NADP(+)] (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1002.12c","secondary_identifiers":["UniProtKB:Q9US47"],"synonyms":[{"name":"SSDH (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ALDH5A1","type":"exact"}],"termid":"PR:Q9US47"}


id: MONDO:0010205
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Wolman disease with hypolipoproteinemia and acanthocytosis (obsolete MONDO:0010205)","termid":"MONDO:0010205","xrefs":{"Monarch":{"xref_id":"0010205"}}}


id: MONDO:0002127
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Narrowing of any part of the urethra. It is characterized by decreased urinary stream and often other obstructive voiding symptoms.","definition_xrefs":["MESH:D014525"],"direct_ancestors":[{"relation_name":"is_a","term_name":"urethral obstruction","termid":"MONDO:0001556"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"urethral stricture","secondary_identifiers":["ICD9:598.9","DOID:1829","NCIT:C79821","HP:0012227","icd11.foundation:611219038","ICD9:598.8","SCTID:76618002","UMLS:C4551691","MEDGEN:1641821"],"synonyms":[{"name":"urethral stricture","type":"exact"},{"name":"urethral stricture (disease)","type":"exact"}],"termid":"MONDO:0002127","xrefs":{"Monarch":{"xref_id":"0002127"}}}


id: GO:0005549
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an odorant, any substance capable of stimulating the sense of smell.","definition_xrefs":["GOC:jl","ISBN:0721662544"],"direct_ancestors":[{"relation_name":"is_a","term_name":"binding","termid":"GO:0005488"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"odorant binding","termid":"GO:0005549"}


id: MONDO:0000996
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare non-Hodgkin or Hodgkin lymphoma that arises from the prostate gland.","definition_xrefs":["NCIT:C5533"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphoma","termid":"MONDO:0005062"},{"relation_name":"is_a","term_name":"prostate cancer","termid":"MONDO:0008315"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0004992"],"is_obsolete":false,"name":"prostate lymphoma","secondary_identifiers":["DOID:10290","MEDGEN:235500","UMLS:C1335512"],"synonyms":[{"name":"lymphoma of prostate","type":"exact"},{"name":"lymphoma of prostate gland","type":"exact"},{"name":"lymphoma of the prostate","type":"exact"},{"name":"primary prostate lymphoma","type":"exact"},{"name":"prostate gland lymphoma","type":"exact"},{"name":"prostate lymphoma","type":"exact"}],"termid":"MONDO:0000996","xrefs":{"Monarch":{"xref_id":"0000996"}}}


id: MONDO:0013525
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any primary ciliary dyskinesia in which the cause of the disease is a mutation in the DNAL1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary ciliary dyskinesia","termid":"MONDO:0016575"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"primary ciliary dyskinesia 16","secondary_identifiers":["OMIM:614017","DOID:0110613","UMLS:C3151460","MEDGEN:462810","GARD:15743"],"synonyms":[{"name":"CILD16","type":"exact"},{"name":"DNAL1 primary ciliary dyskinesia","type":"exact"},{"name":"ciliary dyskinesia, primary, 16","type":"related"},{"name":"ciliary dyskinesia, primary, 16, with or without situs inversus","type":"related"},{"name":"ciliary dyskinesia, primary, type 16","type":"exact"},{"name":"primary ciliary dyskinesia 16 with or without situs inversus","type":"exact"},{"name":"primary ciliary dyskinesia caused by mutation in DNAL1","type":"exact"},{"name":"primary ciliary dyskinesia type 16","type":"exact"}],"termid":"MONDO:0013525","xrefs":{"Monarch":{"xref_id":"0013525"}}}


id: PR:O74818
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A carboxypeptidase B that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02688","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized carboxypeptidase C337.07c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC337.07c","secondary_identifiers":["UniProtKB:O74818"],"synonyms":[{"name":"Spom972h-CPB1","type":"exact"}],"termid":"PR:O74818"}


id: PBO:0072999
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sodium voltage-gated channel beta subunit 1","termid":"PBO:0072999"}


id: PBO:0016886
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"box H/ACA small nucleolar RNA snR97","termid":"PBO:0016886"}


id: PBO:0089657
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EPS15 repeat family actin cortical patch component Ede1","termid":"PBO:0089657"}


id: PBO:0012840
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3'-5'-exoribonuclease activity Dis3L2","termid":"PBO:0012840"}


id: PBO:0083971
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Glucosamine-6-phosphate acetyltransferase; evolutionarily conserved; required for multiple cell cycle events including passage through START, DNA synthesis, and mitosis; involved in UDP-N-acetylglucosamine synthesis, forms GlcNAc6P from AcCoA","termid":"PBO:0083971"}


id: GO:0015493
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: lysine(out) + H+(out) = lysine(in) + H+(in).","definition_xrefs":["TC:2.A.3.1.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid:proton symporter activity","termid":"GO:0005280"},{"relation_name":"is_a","term_name":"organic cation transmembrane transporter activity","termid":"GO:0015101"},{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transporter activity","termid":"GO:0046943"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"lysine:proton symporter activity","synonyms":[{"name":"lysine:hydrogen symporter activity","type":"exact"}],"termid":"GO:0015493"}


id: GO:0090534
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Protein complex that carries out the reaction: ATP + H2O + Ca2+(out) = ADP + phosphate + Ca2+(in).","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cation-transporting ATPase complex","termid":"GO:0090533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"calcium ion-transporting ATPase complex","termid":"GO:0090534"}


id: PBO:0082537
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cell wall mannoprotein; has similarity to Tir1p, Tir2p, Tir3p, and Tir4p; member of the seripauperin multigene family encoded mainly in subtelomeric regions; expressed under anaerobic conditions, completely repressed during aerobic growth","termid":"PBO:0082537"}


id: PBO:0090160
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA turnover and ribosome assembly protein Mrt4","termid":"PBO:0090160"}


id: GO:0102620
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 3-geranylgeranylindole + O2 + NADPH + H+ = 10,11-epoxy-3-geranylgeranylindole + NADP + H2O.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 3-geranylgeranylindole NADPH:oxygen oxidoreductase (10,11-epoxidizing) activity (obsolete GO:0102620)","termid":"GO:0102620"}


id: MOD:01570
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom of a residue with the Applied Biosystems iTRAQ8plex-119 reporter+balance group.","definition_xrefs":["Unimod:731"],"direct_ancestors":[{"relation_name":"is_a","term_name":"(13)C isotope tagged reagent","termid":"MOD:01428"},{"relation_name":"is_a","term_name":"(15)N isotope tagged reagent","termid":"MOD:01429"},{"relation_name":"is_a","term_name":"iTRAQ8plex reporter+balance reagent acylated residue","termid":"MOD:01526"},{"relation_name":"is_a","term_name":"modifications with monoisotopic mass differences that are nominally equal at 304.199039 Da","termid":"MOD:01584"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iTRAQ8plex-119 reporter+balance reagent acylated residue","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"},{"name":"Accurate mass for 115, 118, 119 & 121","type":"related"},{"name":"Applied Biosystems iTRAQ(TM) multiplexed quantitation chemistry","type":"related"},{"name":"iTRAQ8plex:13C(6)15N(2)","type":"related"}],"termid":"MOD:01570"}


id: PBO:0074613
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 15B-2","termid":"PBO:0074613"}


id: MONDO:0002240
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acute form of perichondritis of auricle.","definition_xrefs":["MONDO:patterns/acute"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute otitis externa","termid":"MONDO:0001051"},{"relation_name":"is_a","term_name":"perichondritis of auricle","termid":"MONDO:0002246"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acute perichondritis of pinna","secondary_identifiers":["ICD9:380.01","UMLS:C0155390","SCTID:45855004","DOID:221","MEDGEN:509946"],"synonyms":[{"name":"acute perichondritis of auricle","type":"exact"},{"name":"perichondritis of auricle, acute","type":"exact"}],"termid":"MONDO:0002240","xrefs":{"Monarch":{"xref_id":"0002240"}}}


id: MONDO:0013173
data:
  {"annotated_genes":["SJAG_04358"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86855],"is_not":false,"summary":null,"term":"MONDO:0013173"}]},"cv_name":"mondo","definition":"Any autosomal recessive non-syndromic intellectual disability in which the cause of the disease is a mutation in the TRAPPC9 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive non-syndromic intellectual disability","termid":"MONDO:0019502"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04358":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0037792","MONDO:0006025"],"is_obsolete":false,"name":"intellectual disability, autosomal recessive 13","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:22548","MEDGEN:442564","MESH:C567714","OMIM:613192","DOID:0081098","UMLS:C2750791"],"synonyms":[{"name":"MRT13","type":"related"},{"name":"TRAPPC9 autosomal recessive non-syndromic intellectual disability","type":"exact"},{"name":"autosomal recessive non-syndromic intellectual disability caused by mutation in TRAPPC9","type":"exact"},{"name":"intellectual disability, autosomal recessive 13","type":"exact"},{"name":"intellectual disability, autosomal recessive type 13","type":"exact"},{"name":"mental retardation, autosomal recessive 13","type":"related"},{"name":"mental retardation, autosomal recessive type 13","type":"exact"}],"termid":"MONDO:0013173","terms_by_termid":{"MONDO:0013173":null},"xrefs":{"Monarch":{"xref_id":"0013173"}}}


id: MONDO:0002097
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete ocular melanoma (obsolete MONDO:0002097)","termid":"MONDO:0002097","xrefs":{"Monarch":{"xref_id":"0002097"}}}


id: PBO:0054431
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1827","termid":"PBO:0054431"}


id: FYPO:0003144
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of protein measured in a cell during a cellular response to methyl methanesulfonate is normal (i.e. indistinguishable from wild type). Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein level during vegetative growth","termid":"FYPO:0000833"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000257","FYPO:0001312"],"is_obsolete":false,"name":"normal protein level during cellular response to methyl methanesulfonate","synonyms":[{"name":"normal protein accumulation during cellular response to methyl methanesulfonate","type":"related"},{"name":"normal protein level during cellular response to MMS","type":"exact"},{"name":"normal protein level during cellular response to methyl methanesulfonate during mitotic cell cycle","type":"related"},{"name":"normal protein level during cellular response to methyl methanesulfonate during vegetative growth","type":"exact"},{"name":"normal protein level during cellular response to methyl methanesulphonate","type":"exact"}],"termid":"FYPO:0003144"}


id: GO:2000054
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of Wnt signaling pathway involved in dorsal/ventral axis specification.","definition_xrefs":["GOC:yaf","GOC:obol"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of Wnt signaling pathway involved in dorsal/ventral axis specification (obsolete GO:2000054)","synonyms":[{"name":"negative regulation of Wnt receptor signaling pathway involved in dorsal/ventral axis specification","type":"exact"},{"name":"negative regulation of Wnt receptor signalling pathway involved in dorsal/ventral axis specification","type":"exact"},{"name":"negative regulation of Wnt-activated signaling pathway involved in dorsal/ventral axis specification","type":"exact"}],"termid":"GO:2000054"}


id: MONDO:0009106
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare congenital abnormality in which the spinal cord is split in half by fibrous or bony tissue. It may present as an isolated phenomenon or in association with spina bifida.","definition_xrefs":["NCIT:C98913"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"neural tube defect","termid":"MONDO:0018075"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0020022"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0020022"],"is_obsolete":false,"name":"diastematomyelia","secondary_identifiers":["ICD10CM:Q06.2","MedDRA:10012750","MEDGEN:3801","Orphanet:1671","SCTID:49351009","icd11.foundation:2070601288","GARD:1851","UMLS:C0011999","OMIM:222500","ICD9:742.51"],"synonyms":[{"name":"Dimyelia","type":"related"},{"name":"Pseudodiplomyelia","type":"related"},{"name":"SCM type 1","type":"exact"},{"name":"SSCM","type":"related"},{"name":"diastematomyelia","type":"exact"},{"name":"diplomyelia","type":"related"},{"name":"split cord malformation","type":"related"},{"name":"split cord malformation type 1","type":"exact"},{"name":"split spinal cord malformation","type":"related"}],"termid":"MONDO:0009106","xrefs":{"Monarch":{"xref_id":"0009106"}}}


id: GO:0047374
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-methylumbelliferyl acetate + H2O = 4-methylumbelliferone + acetate + H+.","definition_xrefs":["EC:3.1.1.56","RHEA:12208"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deacetylase activity","termid":"GO:0019213"},{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0019213"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016788","GO:0016787","GO:0019213"],"is_obsolete":false,"name":"methylumbelliferyl-acetate deacetylase activity","secondary_identifiers":["KEGG_REACTION:R04141","MetaCyc:3.1.1.56-RXN"],"synonyms":[{"name":"4-methylumbelliferyl-acetate acylhydrolase activity","type":"related"},{"name":"esterase D activity","type":"related"}],"termid":"GO:0047374"}


id: GO:0110140
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a flagellum attachment zone. FAZ is a network of cytoskeletal and membranous connections responsible for the lateral attachment of the cilium to the cell body in some trypanosomatid species.","definition_xrefs":["GOC:ach","PMID:26776656"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell junction organization","termid":"GO:0034330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"flagellum attachment zone organization","synonyms":[{"name":"FAZ organization","type":"exact"},{"name":"flagellum attachment zone organisation","type":"exact"}],"termid":"GO:0110140"}


id: PBO:0002407
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNase P and RNase MRP subunit (predicted)","termid":"PBO:0002407"}


id: SO:0001683
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence motif is a nucleotide or amino-acid sequence pattern that may have biological significance.","direct_ancestors":[{"relation_name":"is_a","term_name":"biological_region","termid":"SO:0001411"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sequence_motif","secondary_identifiers":["http://en.wikipedia.org/wiki/Sequence_motif"],"synonyms":[{"name":"sequence motif","type":"related"}],"termid":"SO:0001683"}


id: PATO:0001658
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A rotatiotion quality inhering in a bearer by virtue of being rotated towards the back or upper surface of an organism.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rotated","termid":"PATO:0001599"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dorsally rotated","termid":"PATO:0001658"}


id: PBO:0067726
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 24","termid":"PBO:0067726"}


id: GO:0097091
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that results in grouping synaptic vesicles in presynaptic structures.","definition_xrefs":["GOC:pr","PMID:7568108","GOC:ans","PMID:19900895"],"direct_ancestors":[{"relation_name":"is_a","term_name":"synaptic vesicle localization","termid":"GO:0097479"},{"relation_name":"part_of","term_name":"synaptic vesicle cycle","termid":"GO:0099504"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150","GO:0016192"],"is_obsolete":false,"name":"synaptic vesicle clustering","termid":"GO:0097091"}


id: GO:0046483
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving heterocyclic compounds, those with a cyclic molecular structure and at least two different atoms in the ring (or rings).","definition_xrefs":["ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete heterocycle metabolic process (obsolete GO:0046483)","termid":"GO:0046483"}


id: GO:0034551
data:
  {"annotated_genes":["SJAG_03099","SJAG_01141","SJAG_01405","SJAG_04560","SJAG_05305"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[60623,77220,78658,107967,113235],"is_not":false,"summary":null,"term":"GO:0034551"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form the cytochrome bc(1) complex (also known as ubiquinol-cytochrome c reductase), in the mitochondrial inner membrane.","definition_xrefs":["GOC:mcc","GOC:dgf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"respiratory chain complex III assembly","termid":"GO:0017062"},{"relation_name":"is_a","term_name":"mitochondrial respiratory chain complex assembly","termid":"GO:0033108"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01141":null,"SJAG_01405":null,"SJAG_03099":null,"SJAG_04560":null,"SJAG_05305":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007005"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0007005","GO:0065003"],"is_obsolete":false,"name":"mitochondrial respiratory chain complex III assembly","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-9865881"],"synonyms":[{"name":"mitochondrial cytochrome bc(1) complex assembly","type":"exact"}],"termid":"GO:0034551","terms_by_termid":{"GO:0034551":null}}


id: PBO:0076390
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tachykinin receptor 3","termid":"PBO:0076390"}


id: PBO:0051442
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable 3-27","termid":"PBO:0051442"}


id: GO:0052831
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: inositol-1,3,4,6-tetrakisphosphate + H2O = inositol-3,4,6-trisphosphate + phosphate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inositol tetrakisphosphate phosphatase activity","termid":"GO:0052743"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0016788","GO:0003824"],"is_obsolete":false,"name":"inositol-1,3,4,6-tetrakisphosphate 1-phosphatase activity","secondary_identifiers":["Reactome:R-HSA-1855159"],"termid":"GO:0052831"}


id: FYPO:0005414
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of protein measured in a cell during the second meiotic nuclear division is higher than normal. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein level during meiosis","termid":"FYPO:0003611"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0006551","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"increased protein level during meiosis II","synonyms":[{"name":"increased protein accumulation during meiosis II","type":"related"},{"name":"increased protein level during second meiotic nuclear division","type":"exact"}],"termid":"FYPO:0005414"}


id: PBO:0067507
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 647, pseudogene","termid":"PBO:0067507"}


id: PBO:0068812
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 49, pseudogene","termid":"PBO:0068812"}


id: GO:0048355
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of mucilage that occur in the root cap; mucilage is normally synthesized during root growth.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mucilage biosynthetic process","termid":"GO:0010192"},{"relation_name":"part_of","term_name":"root cap mucilage metabolic process","termid":"GO:0048360"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"root cap mucilage biosynthetic process","synonyms":[{"name":"root cap mucilage anabolism","type":"exact"},{"name":"root cap mucilage biosynthesis","type":"exact"},{"name":"root cap mucilage formation","type":"exact"},{"name":"root cap mucilage synthesis","type":"exact"}],"termid":"GO:0048355"}


id: GO:0044776
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The DNA polymerase III core complex consists of the alpha,epsilon and theta subunits and is carries out the polymerase and the 3'-5' exonuclease proofreading activities.","definition_xrefs":["GOC:jl","UniProt:P06710"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"},{"relation_name":"part_of","term_name":"DNA polymerase III complex","termid":"GO:0009360"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005634","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"DNA polymerase III, core complex","termid":"GO:0044776"}


id: MONDO:0002412
data:
  {"annotated_genes":["SJAG_02785","SJAG_02107","SJAG_02009","SJAG_03660","SJAG_03824","SJAG_02131","SJAG_00461","SJAG_02369","SJAG_00605","SJAG_03150","SJAG_03149"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85526,85528,85527],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013046"},{"annotations":[87600],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010392"},{"annotations":[86210],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009865"},{"annotations":[85598,85599],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009290"},{"annotations":[86048],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009295"},{"annotations":[87581,87580],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013291"},{"annotations":[86604],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009867"},{"annotations":[87094,87095],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014526"}]},"cv_name":"mondo","definition":"An inherited metabolic disorder characterized either by defects in glycogen synthesis or defects in the breaking down of glycogen. It results either in the creation of abnormal forms of glycogen or accumulation of glycogen in the tissues.","definition_xrefs":["NCIT:C61272"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete inborn glycogen metabolism disorder (obsolete MONDO:0000422)","termid":"MONDO:0000422"},{"relation_name":"is_a","term_name":"inborn carbohydrate metabolic disorder","termid":"MONDO:0019214"},{"relation_name":"is_a","term_name":"inborn disorder of energy metabolism","termid":"MONDO:0019243"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00461":null,"SJAG_00605":null,"SJAG_02009":null,"SJAG_02107":null,"SJAG_02131":null,"SJAG_02369":null,"SJAG_02785":null,"SJAG_03149":null,"SJAG_03150":null,"SJAG_03660":null,"SJAG_03824":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0037792"],"is_obsolete":false,"name":"disorder of glycogen metabolism","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["Orphanet:79201","MedDRA:10061990","ICD10CM:E74.0","icd11.foundation:1187107383","DOID:0050728","DOID:2747","NANDO:1200838","ICD9:271.0","SCTID:29633007","GARD:18973","MESH:D006008","OMIMPS:232200","UMLS:C0017919","MEDGEN:6639"],"synonyms":[{"name":"GSD","type":"exact"},{"name":"glycogen metabolism disorder","type":"exact"},{"name":"glycogen storage disease","type":"exact"},{"name":"glycogen storage disorder","type":"exact"},{"name":"glycogenoses","type":"exact"},{"name":"glycogenosis","type":"exact"},{"name":"inborn error of glycogen metabolic process","type":"exact"},{"name":"inborn glycogen metabolic process disorder","type":"exact"},{"name":"inborn glycogen storage disorder","type":"exact"},{"name":"rare inborn error of glycogen metabolic process","type":"exact"}],"termid":"MONDO:0002412","terms_by_termid":{"MONDO:0009290":null,"MONDO:0009295":null,"MONDO:0009865":null,"MONDO:0009867":null,"MONDO:0010392":null,"MONDO:0013046":null,"MONDO:0013291":null,"MONDO:0014526":null},"xrefs":{"Monarch":{"xref_id":"0002412"}}}


id: GO:0051169
data:
  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directed movement of substances into, out of, or within the nucleus.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular 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id: PBO:0063921
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PIK3IP1 divergent transcript","termid":"PBO:0063921"}


id: MONDO:0012277
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Late-onset distal myopathy, Markesbery-Griggs type is a rare, genetic, non-dystrophic myofibrillar myopathy disorder characterized by late-adult onset of distal and/or proximal limb muscle weakness with initial involvement of posterior lower leg muscles, medial gastrocnemius and soleus. Patients present with ankle weakness followed by weakness of finger and wrist extensors and later on of proximal muscles. Ambulation is usually preserved. Late-onset associated cardiomyopathy and/or neuropathy has been reported in a minority of cases.","definition_xrefs":["Orphanet:98912"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"autosomal dominant distal myopathy","termid":"MONDO:0016108"},{"relation_name":"is_a","term_name":"qualitative or quantitative defects of protein ZASP","termid":"MONDO:0016190"},{"relation_name":"is_a","term_name":"myofibrillar myopathy","termid":"MONDO:0018943"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0005336","MONDO:0002320","MONDO:0000426"],"is_obsolete":false,"name":"myofibrillar myopathy 4","secondary_identifiers":["UMLS:C4721886","GARD:1886","DOID:0080095","MEDGEN:1648314","OMIM:609452","MESH:C563718"],"synonyms":[{"name":"LDB3 myofibrillar myopathy (disease)","type":"exact"},{"name":"MFM4","type":"related"},{"name":"ZASP-related myofibrillar myopathy","type":"exact"},{"name":"late-onset distal myopathy, Markesbery-Griggs type","type":"related"},{"name":"myofibrillar myopathy (disease) caused by mutation in LDB3","type":"exact"},{"name":"myofibrillar myopathy type 4","type":"exact"},{"name":"myopathy, myofibrillar, 4","type":"related"},{"name":"myopathy, myofibrillar, type 4","type":"exact"},{"name":"zaspopathy","type":"exact"}],"termid":"MONDO:0012277","xrefs":{"Monarch":{"xref_id":"0012277"}}}


id: FYPO:0004315
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the amount, distribution, or morphology of all or part of the microtubule cytoskeleton is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component during vegetative growth","termid":"FYPO:0001322"},{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton","termid":"FYPO:0002399"},{"relation_name":"output_of","term_name":"abnormal microtubule cytoskeleton organization during vegetative growth","termid":"FYPO:0001350"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000054"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0000054","FYPO:0001320","FYPO:0002399","FYPO:0001985"],"is_obsolete":false,"name":"abnormal microtubule cytoskeleton during vegetative growth","synonyms":[{"name":"abnormal microtubule cytoskeleton during mitotic cell cycle","type":"related"},{"name":"abnormal microtubule cytoskeleton physical object quality during vegetative growth","type":"exact"},{"name":"disorganized microtubule cytoskeleton during vegetative growth","type":"related"}],"termid":"FYPO:0004315"}


id: PR:O14041
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC2C4.08 gene.","definition_xrefs":["UniProtKB:O14041","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized nucleolar protein C2C4.08 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC2C4.08","synonyms":[{"name":"Spom972h-SPAC2C4.08","type":"exact"}],"termid":"PR:O14041"}


id: GO:0044529
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the propensity of mitochondrial rRNA molecules to degradation. Includes processes that both stabilize and destabilize mitochondrial rRNAs.","definition_xrefs":["GOC:jl","GOC:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of rRNA stability","termid":"GO:0044357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of mitochondrial rRNA stability","termid":"GO:0044529"}


id: PBO:0048133
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"frataxin pseudogene 1","termid":"PBO:0048133"}


id: GO:0042794
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The synthesis of ribosomal RNA (rRNA) from a plastid DNA template, usually by a specific plastid RNA polymerase.","definition_xrefs":["GOC:jl","ISBN:0321000382"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA transcription","termid":"GO:0009303"},{"relation_name":"is_a","term_name":"plastid transcription","termid":"GO:0042793"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0006351"],"is_obsolete":false,"name":"plastid rRNA transcription","synonyms":[{"name":"rRNA transcription from plastid promoter","type":"exact"}],"termid":"GO:0042794"}


id: PBO:0113177
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Karyopherin beta; bidirectional nuclear transport receptor (biportin) that shuttles distinct sets of cargoes in opposite directions; responsible for import of Toa1p-Toa2p complex into nucleus; depletes eIF5A and eEF2 from cell nuclei; binds to nucleoporins Nup1p and Nup2p; may play a role in regulation of pleiotropic drug resistance","termid":"PBO:0113177"}


id: PBO:0079409
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin beta 8 class VIII pseudogene 3","termid":"PBO:0079409"}


id: GO:0019403
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of galactitol, the hexitol derived by the reduction of the aldehyde group of either D- or L-galactose.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"galactitol metabolic process","termid":"GO:0019402"},{"relation_name":"is_a","term_name":"hexitol biosynthetic process","termid":"GO:0019406"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"galactitol biosynthetic process","synonyms":[{"name":"galactitol anabolism","type":"exact"},{"name":"galactitol biosynthesis","type":"exact"},{"name":"galactitol formation","type":"exact"},{"name":"galactitol synthesis","type":"exact"}],"termid":"GO:0019403"}


id: GO:1902346
data:
  {"annotated_genes":["SJAG_02294"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[101011],"is_not":false,"summary":null,"term":"GO:1902346"}]},"cv_name":"biological_process","definition":"Any meiotic strand displacement that is involved in double-strand break repair via synthesis-dependent strand annealing (SDSA).","definition_xrefs":["PMID:22723423","GOC:al","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic strand displacement","termid":"GO:0000714"},{"relation_name":"part_of","term_name":"double-strand break repair via synthesis-dependent strand annealing","termid":"GO:0045003"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02294":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006310"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006281"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0007049","GO:0006310","GO:0008150","GO:0006259","GO:0006281"],"is_obsolete":false,"name":"meiotic strand displacement involved in double-strand break repair via SDSA","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"meiotic D-loop dissociation involved in double-strand break repair via synthesis-dependent strand annealing","type":"related"},{"name":"meiotic D-loop dissociation involved in mitotic gene conversion","type":"related"},{"name":"meiotic D-loop processing involved in double-strand break repair via synthesis-dependent strand annealing","type":"related"},{"name":"meiotic D-loop processing involved in mitotic gene conversion","type":"related"},{"name":"meiotic displacement loop dissociation involved in double-strand break repair via synthesis-dependent strand annealing","type":"related"},{"name":"meiotic displacement loop dissociation involved in mitotic gene conversion","type":"related"},{"name":"meiotic displacement loop processing involved in double-strand break repair via synthesis-dependent strand annealing","type":"related"},{"name":"meiotic displacement loop processing involved in mitotic gene conversion","type":"related"},{"name":"meiotic strand displacement involved in SDSA","type":"broad"},{"name":"meiotic strand displacement involved in double-strand break repair via synthesis-dependent strand annealing","type":"exact"},{"name":"meiotic strand displacement involved in mitotic gene conversion","type":"related"}],"termid":"GO:1902346","terms_by_termid":{"GO:1902346":null}}


id: PBO:0004976
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pseudogene malic enzyme (predicted)","termid":"PBO:0004976"}


id: PBO:0069368
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 628, pseudogene","termid":"PBO:0069368"}


id: PBO:0085759
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein kinase involved in response to oxidative and osmotic stress; identified as suppressor of S. pombe cell cycle checkpoint mutations; similar to CaM (calmodulin) kinases; RCK2 has a paralog, RCK1, that arose from the whole genome duplication","termid":"PBO:0085759"}


id: FYPO:0002348
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cytokinesis phenotype observed in the vegetative growth phase of the life cycle in which stress granule assembly does not occur.","definition_xrefs":["PMID:21098141","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal stress granule assembly during vegetative growth","termid":"FYPO:0002347"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"abolished stress granule assembly during vegetative growth","synonyms":[{"name":"abolished cytoplasmic stress granule assembly during vegetative growth","type":"exact"},{"name":"abolished stress granule assembly during mitotic cell cycle","type":"related"},{"name":"abolished stress granule formation during vegetative growth","type":"exact"}],"termid":"FYPO:0002348"}


id: MONDO:0020264
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete spinocerebellar degenerescence and spastic paraparesis with an oculomotor anomaly (obsolete MONDO:0020264)","secondary_identifiers":["Orphanet:98694"],"termid":"MONDO:0020264","xrefs":{"Monarch":{"xref_id":"0020264"}}}


id: GO:0002260
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of regulating the proliferation and elimination of lymphocytes such that the total number of lymphocytes within a whole or part of an organism is stable over time in the absence of an outside stimulus.","definition_xrefs":["PMID:15826826","PMID:16319493","GOC:add","PMID:16551262","PMID:16551252"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukocyte homeostasis","termid":"GO:0001776"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lymphocyte homeostasis","termid":"GO:0002260"}


id: PBO:0065373
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pregnancy specific beta-1-glycoprotein 1","termid":"PBO:0065373"}


id: PBO:0063227
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin 11 X-linked","termid":"PBO:0063227"}


id: PBO:0045484
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DSCAM intronic transcript 1","termid":"PBO:0045484"}


id: PBO:0076905
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed 261","termid":"PBO:0076905"}


id: PBO:0055483
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2916","termid":"PBO:0055483"}


id: PBO:0073491
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sphingosine-1-phosphate lyase 1","termid":"PBO:0073491"}


id: FYPO:0004994
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the first meiotic nuclear division begins later than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"delayed onset of meiosis","termid":"FYPO:0000477"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0000631"],"is_obsolete":false,"name":"delayed onset of meiosis I","synonyms":[{"name":"delayed meiosis I","type":"exact"},{"name":"delayed onset of first meiotic nuclear division","type":"exact"}],"termid":"FYPO:0004994"}


id: PBO:0029209
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_cobalt","termid":"PBO:0029209"}


id: PBO:0082022
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zyg-11 family member B, cell cycle regulator","termid":"PBO:0082022"}


id: GO:0050238
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: pyridoxine + acceptor = isopyridoxal + reduced acceptor.","definition_xrefs":["MetaCyc:PYRIDOXINE-5-DEHYDROGENASE-RXN","EC:1.1.99.9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH-OH group of donors","termid":"GO:0016614"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"pyridoxine 5-dehydrogenase activity","secondary_identifiers":["RHEA:14497"],"synonyms":[{"name":"pyridoxal-5-dehydrogenase activity","type":"related"},{"name":"pyridoxin 5-dehydrogenase activity","type":"related"},{"name":"pyridoxine 5'-dehydrogenase activity","type":"related"},{"name":"pyridoxine:(acceptor) 5-oxidoreductase activity","type":"related"},{"name":"pyridoxine:acceptor 5-oxidoreductase activity","type":"related"},{"name":"pyridoxol 5-dehydrogenase activity","type":"related"}],"termid":"GO:0050238"}


id: PBO:0057564
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 759","termid":"PBO:0057564"}


id: PBO:0065241
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline rich 14 like","termid":"PBO:0065241"}


id: MOD:00954
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that crosslinks two residues with a covalent bond and the loss of water.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"crosslinked residues","termid":"MOD:00033"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"crosslinked residues with loss of water","termid":"MOD:00954"}


id: PBO:0028162
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_ATP_binding","termid":"PBO:0028162"}


id: GO:1905159
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of Factor XII activation.","definition_xrefs":["GOC:TermGenie","PMID:617517","GO_REF:0000058"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of Factor XII activation (obsolete GO:1905159)","synonyms":[{"name":"down regulation of Factor XII activation","type":"exact"},{"name":"down regulation of Hageman factor activation","type":"exact"},{"name":"down-regulation of Factor XII activation","type":"exact"},{"name":"down-regulation of Hageman factor activation","type":"exact"},{"name":"downregulation of Factor XII activation","type":"exact"},{"name":"downregulation of Hageman factor activation","type":"exact"},{"name":"inhibition of Factor XII activation","type":"narrow"},{"name":"inhibition of Hageman factor activation","type":"narrow"},{"name":"negative regulation of Hageman factor activation","type":"exact"}],"termid":"GO:1905159"}


id: PR:O94477
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- myo52 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94477"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin-52 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1919.10c","synonyms":[{"name":"Spom972h-myo52","type":"exact"},{"name":"myosin type V-2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94477"}


id: GO:0044472
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which an organism alters or subverts the activity of a calcium channel in another organism via the action of a venom.","definition_xrefs":["GOC:fj","PMID:20920515","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"venom-mediated perturbation of ion channel activity","termid":"GO:0044560"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"venom-mediated perturbation of calcium channel activity","synonyms":[{"name":"envenomation resulting in modulation of calcium channel activity in another organism","type":"exact"},{"name":"envenomation resulting in modulation of calcium channel activity in other organism","type":"exact"}],"termid":"GO:0044472"}


id: GO:2001205
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of osteoclast development.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of osteoclast differentiation","termid":"GO:0045671"},{"relation_name":"is_a","term_name":"regulation of osteoclast development","termid":"GO:2001204"},{"relation_name":"negatively_regulates","term_name":"osteoclast development","termid":"GO:0036035"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of osteoclast development","synonyms":[{"name":"negative regulation of osteoclast cell development","type":"exact"}],"termid":"GO:2001205"}


id: PBO:0053119
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lipocalin 9","termid":"PBO:0053119"}


id: GO:1904806
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein oxidation.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:22719267"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein modification process","termid":"GO:0031399"},{"relation_name":"regulates","term_name":"protein oxidation","termid":"GO:0018158"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of protein oxidation","synonyms":[{"name":"regulation of protein amino acid oxidation","type":"exact"}],"termid":"GO:1904806"}


id: PBO:0046699
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ETS2 antisense RNA 1","termid":"PBO:0046699"}


id: GO:0051051
data:
  {"annotated_genes":["SJAG_03631","SJAG_03581","SJAG_03970","SJAG_01311","SJAG_00296"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91580,113745],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905949"},{"annotations":[94943],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045806"},{"annotations":[88447],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042997"},{"annotations":[88448],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905533"},{"annotations":[106184],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042308"},{"annotations":[88449],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905530"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the directed movement of substances (such as macromolecules, small molecules, ions) into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of biological process","termid":"GO:0048519"},{"relation_name":"is_a","term_name":"regulation of transport","termid":"GO:0051049"},{"relation_name":"negatively_regulates","term_name":"transport","termid":"GO:0006810"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00296":null,"SJAG_01311":null,"SJAG_03581":null,"SJAG_03631":null,"SJAG_03970":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of transport","type":"exact"},{"name":"down-regulation of transport","type":"exact"},{"name":"downregulation of transport","type":"exact"},{"name":"inhibition of transport","type":"narrow"}],"termid":"GO:0051051","terms_by_termid":{"GO:0042308":null,"GO:0042997":null,"GO:0045806":null,"GO:1905530":null,"GO:1905533":null,"GO:1905949":null}}


id: PBO:0040064
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cAMP regulated phosphoprotein 19","termid":"PBO:0040064"}


id: GO:1904219
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of CDP-diacylglycerol-serine O-phosphatidyltransferase activity.","definition_xrefs":["GOC:rl","GOC:TermGenie","PMID:16120614","GOC:BHF","GO_REF:0000059"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of CDP-diacylglycerol-serine O-phosphatidyltransferase activity (obsolete GO:1904219)","synonyms":[{"name":"activation of CDP-diacylglycerol-L-serine O-phosphatidyltransferase activity","type":"narrow"},{"name":"activation of CDP-diacylglycerol-serine O-phosphatidyltransferase activity","type":"narrow"},{"name":"activation of CDP-diacylglycerol:L-serine 3-O-phosphatidyltransferase activity","type":"narrow"},{"name":"activation of CDP-diglyceride-L-serine phosphatidyltransferase activity","type":"narrow"},{"name":"activation of CDP-diglyceride:serine phosphatidyltransferase activity","type":"narrow"},{"name":"activation of CDP-diglycerine-serine O-phosphatidyltransferase activity","type":"narrow"},{"name":"activation of CDPdiacylglycerol-serine O-phosphatidyltransferase activity","type":"narrow"},{"name":"activation of CDPdiglyceride-serine O-phosphatidyltransferase activity","type":"narrow"},{"name":"activation of PS synthase activity","type":"narrow"},{"name":"activation of cytidine 5'-diphospho-1,2-diacyl-sn-glycerol (CDPdiglyceride):L-serine O-phosphatidyltransferase activity","type":"narrow"},{"name":"activation of cytidine 5'-diphospho-1,2-diacyl-sn-glycerol:L-serine O-phosphatidyltransferase activity","type":"narrow"},{"name":"activation of cytidine diphosphoglyceride-serine O-phosphatidyltransferase activity","type":"narrow"},{"name":"activation of phosphatidylserine synthase activity","type":"narrow"},{"name":"activation of phosphatidylserine synthetase activity","type":"narrow"},{"name":"positive regulation of CDP-diacylglycerol-L-serine O-phosphatidyltransferase activity","type":"exact"},{"name":"positive regulation of CDP-diacylglycerol:L-serine 3-O-phosphatidyltransferase activity","type":"exact"},{"name":"positive regulation of CDP-diglyceride-L-serine phosphatidyltransferase activity","type":"exact"},{"name":"positive regulation of CDP-diglyceride:serine phosphatidyltransferase activity","type":"exact"},{"name":"positive regulation of CDP-diglycerine-serine O-phosphatidyltransferase activity","type":"exact"},{"name":"positive regulation of CDPdiacylglycerol-serine O-phosphatidyltransferase activity","type":"exact"},{"name":"positive regulation of CDPdiglyceride-serine O-phosphatidyltransferase activity","type":"exact"},{"name":"positive regulation of PS synthase activity","type":"exact"},{"name":"positive regulation of cytidine 5'-diphospho-1,2-diacyl-sn-glycerol (CDPdiglyceride):L-serine O-phosphatidyltransferase activity","type":"exact"},{"name":"positive regulation of cytidine 5'-diphospho-1,2-diacyl-sn-glycerol:L-serine O-phosphatidyltransferase activity","type":"exact"},{"name":"positive regulation of cytidine diphosphoglyceride-serine O-phosphatidyltransferase activity","type":"exact"},{"name":"positive regulation of phosphatidylserine synthase activity","type":"exact"},{"name":"positive regulation of phosphatidylserine synthetase activity","type":"exact"},{"name":"up regulation of CDP-diacylglycerol-L-serine O-phosphatidyltransferase activity","type":"exact"},{"name":"up regulation of CDP-diacylglycerol-serine O-phosphatidyltransferase activity","type":"exact"},{"name":"up regulation of CDP-diacylglycerol:L-serine 3-O-phosphatidyltransferase activity","type":"exact"},{"name":"up regulation of CDP-diglyceride-L-serine phosphatidyltransferase activity","type":"exact"},{"name":"up regulation of CDP-diglyceride:serine phosphatidyltransferase activity","type":"exact"},{"name":"up regulation of CDP-diglycerine-serine O-phosphatidyltransferase activity","type":"exact"},{"name":"up regulation of CDPdiacylglycerol-serine O-phosphatidyltransferase activity","type":"exact"},{"name":"up regulation of CDPdiglyceride-serine O-phosphatidyltransferase activity","type":"exact"},{"name":"up regulation of PS synthase activity","type":"exact"},{"name":"up regulation of cytidine 5'-diphospho-1,2-diacyl-sn-glycerol (CDPdiglyceride):L-serine O-phosphatidyltransferase activity","type":"exact"},{"name":"up regulation of cytidine 5'-diphospho-1,2-diacyl-sn-glycerol:L-serine O-phosphatidyltransferase activity","type":"exact"},{"name":"up regulation of cytidine diphosphoglyceride-serine O-phosphatidyltransferase activity","type":"exact"},{"name":"up regulation of phosphatidylserine synthase activity","type":"exact"},{"name":"up regulation of phosphatidylserine synthetase activity","type":"exact"},{"name":"up-regulation of CDP-diacylglycerol-L-serine O-phosphatidyltransferase activity","type":"exact"},{"name":"up-regulation of CDP-diacylglycerol-serine O-phosphatidyltransferase activity","type":"exact"},{"name":"up-regulation of CDP-diacylglycerol:L-serine 3-O-phosphatidyltransferase activity","type":"exact"},{"name":"up-regulation of CDP-diglyceride-L-serine phosphatidyltransferase activity","type":"exact"},{"name":"up-regulation of CDP-diglyceride:serine phosphatidyltransferase activity","type":"exact"},{"name":"up-regulation of CDP-diglycerine-serine O-phosphatidyltransferase activity","type":"exact"},{"name":"up-regulation of CDPdiacylglycerol-serine O-phosphatidyltransferase activity","type":"exact"},{"name":"up-regulation of CDPdiglyceride-serine O-phosphatidyltransferase activity","type":"exact"},{"name":"up-regulation of PS synthase activity","type":"exact"},{"name":"up-regulation of cytidine 5'-diphospho-1,2-diacyl-sn-glycerol (CDPdiglyceride):L-serine O-phosphatidyltransferase activity","type":"exact"},{"name":"up-regulation of cytidine 5'-diphospho-1,2-diacyl-sn-glycerol:L-serine O-phosphatidyltransferase activity","type":"exact"},{"name":"up-regulation of cytidine diphosphoglyceride-serine O-phosphatidyltransferase activity","type":"exact"},{"name":"up-regulation of phosphatidylserine synthase activity","type":"exact"},{"name":"up-regulation of phosphatidylserine synthetase activity","type":"exact"},{"name":"upregulation of CDP-diacylglycerol-L-serine O-phosphatidyltransferase activity","type":"exact"},{"name":"upregulation of CDP-diacylglycerol-serine O-phosphatidyltransferase activity","type":"exact"},{"name":"upregulation of CDP-diacylglycerol:L-serine 3-O-phosphatidyltransferase activity","type":"exact"},{"name":"upregulation of CDP-diglyceride-L-serine phosphatidyltransferase activity","type":"exact"},{"name":"upregulation of CDP-diglyceride:serine phosphatidyltransferase activity","type":"exact"},{"name":"upregulation of CDP-diglycerine-serine O-phosphatidyltransferase activity","type":"exact"},{"name":"upregulation of CDPdiacylglycerol-serine O-phosphatidyltransferase activity","type":"exact"},{"name":"upregulation of CDPdiglyceride-serine O-phosphatidyltransferase activity","type":"exact"},{"name":"upregulation of PS synthase activity","type":"exact"},{"name":"upregulation of cytidine 5'-diphospho-1,2-diacyl-sn-glycerol (CDPdiglyceride):L-serine O-phosphatidyltransferase activity","type":"exact"},{"name":"upregulation of cytidine 5'-diphospho-1,2-diacyl-sn-glycerol:L-serine O-phosphatidyltransferase activity","type":"exact"},{"name":"upregulation of cytidine diphosphoglyceride-serine O-phosphatidyltransferase activity","type":"exact"},{"name":"upregulation of phosphatidylserine synthase activity","type":"exact"},{"name":"upregulation of phosphatidylserine synthetase activity","type":"exact"}],"termid":"GO:1904219"}


id: PBO:0033765
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_number_of_Rad51_foci_during_cellular_response_to_ionizing_radiation","termid":"PBO:0033765"}


id: PBO:0051304
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 1/OR-2 (pseudogene)","termid":"PBO:0051304"}


id: PBO:0085461
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Predicted membrane protein required for lumenal ER protein retention; recycles inorganic phosphate byproduct of glycosylation from ER and Golgi; involved in recycling of early Golgi glycosyltransferases from late to early Golgi compartments; mutants secrete the endogenous ER protein, BiP (Kar2p)","termid":"PBO:0085461"}


id: MONDO:0015607
data:
  {"annotated_genes":["SJAG_01465","SJAG_03286","SJAG_04663","SJAG_02035","SJAG_03635","SJAG_04324","SJAG_00786"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86355,86352,86351,86356,86350,86353,86354],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010767"}]},"cv_name":"mondo","definition":"Male sterility due to chromosome Y deletion is characterized by a severe deficiency of spermatogenesis. Chromosome Y deletions are a frequent genetic cause of male infertility.","definition_xrefs":["Orphanet:1646"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndrome caused by partial chromosomal deletion","termid":"MONDO:0000761"},{"relation_name":"is_a","term_name":"male infertility","termid":"MONDO:0005372"},{"relation_name":"is_a","term_name":"chromosome Y disorder","termid":"MONDO:0700028"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00786":null,"SJAG_01465":null,"SJAG_02035":null,"SJAG_03286":null,"SJAG_03635":null,"SJAG_04324":null,"SJAG_04663":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"partial chromosome Y deletion","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C1507149","SCTID:717158001","GARD:16574","MEDGEN:267211","MESH:C536297","HGNC:11311"],"synonyms":[{"name":"Male sterility due to chromosome Y deletion","type":"exact"},{"name":"Y-chromosome microdeletions","type":"related"},{"name":"partial deletion of Y","type":"related"},{"name":"partial deletion of Y chromosome short arm","type":"related"},{"name":"partial deletion of chromosome Y","type":"related"},{"name":"partial deletion of the long arm of the Y chromosome","type":"related"}],"termid":"MONDO:0015607","terms_by_termid":{"MONDO:0010767":null},"xrefs":{"Monarch":{"xref_id":"0015607"}}}


id: PBO:0090917
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diphthamide biosynthesis complex WD repeat protein subunit Dph7","termid":"PBO:0090917"}


id: GO:0015180
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of L-alanine from one side of a membrane to the other. L-alanine is the L-enantiomer of 2-aminopropanoic acid.","definition_xrefs":["ISBN:0815340729","GOC:go_curators","GOC:mah","ISBN:0198506732","GOC:jsg","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-amino acid transmembrane transporter activity","termid":"GO:0015179"},{"relation_name":"is_a","term_name":"alanine transmembrane transporter activity","termid":"GO:0022858"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"L-alanine transmembrane transporter activity","synonyms":[{"name":"L-alanine transporter activity","type":"broad"}],"termid":"GO:0015180"}


id: PBO:0052205
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium voltage-gated channel subfamily Q member 2","termid":"PBO:0052205"}


id: PBO:0069912
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1204, pseudogene","termid":"PBO:0069912"}


id: GO:0005734
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete box C + D snoRNP protein (obsolete GO:0005734)","synonyms":[{"name":"box C + D snoRNP protein","type":"exact"}],"termid":"GO:0005734"}


id: PR:Q96WU9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCPB16A4.06c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q96WU9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein PB16A4.06c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCPB16A4.06c","synonyms":[{"name":"Spom972h-SPCPB16A4.06c","type":"exact"}],"termid":"PR:Q96WU9"}


id: FYPO:0007607
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the initiation of nuclear DNA replication begins later than normal when cells are returned to nitrogen-rich medium following nitrogen starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"delayed onset of mitotic DNA replication initiation","termid":"FYPO:0006031"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000293","FYPO:0000002","FYPO:0000631","FYPO:0001985","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"delayed onset of mitotic DNA replication initiation during recovery from nitrogen starvation","synonyms":[{"name":"delayed mitotic DNA replication initiation during recovery from nitrogen starvation","type":"exact"},{"name":"delayed onset of mitotic DNA replication initiation during recovery from nitrogen depletion","type":"exact"},{"name":"delayed onset of mitotic DNA replication initiation during recovery from nitrogen deprivation","type":"exact"}],"termid":"FYPO:0007607"}


id: PBO:0063818
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pleckstrin homology like domain family A member 3","termid":"PBO:0063818"}


id: PR:O94448
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A CAAX prenyl protease 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00351","PANTHER:PTHR13046:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CAAX prenyl protease 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1687.02","secondary_identifiers":["UniProtKB:O94448"],"synonyms":[{"name":"PPSEP 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-RCE1","type":"exact"},{"name":"prenyl protein-specific endoprotease 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94448"}


id: PBO:0047720
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"flavin containing dimethylaniline monoxygenase 11, pseudogene","termid":"PBO:0047720"}


id: PBO:0065800
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB1A, member RAS oncogene family","termid":"PBO:0065800"}


id: PBO:0031399
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_mitotic_chromosome_congression","termid":"PBO:0031399"}


id: GO:0016212
data:
  {"annotated_genes":["SJAG_04988"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[74098],"is_not":false,"summary":null,"term":"GO:0016212"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-oxoglutarate + L-kynurenine = H2O + kynurenate + L-glutamate. The product 4-(2-aminophenyl)-2,4-dioxobutanoate is converted into kynurenate by a spontaneous reaction. Also acts on 3-hydroxykynurenine to form xanthurenate.","definition_xrefs":["EC:2.6.1.7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04988":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016769","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"kynurenine-oxoglutarate transaminase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-893596","Reactome:R-HSA-893583","Reactome:R-HSA-901097"],"synonyms":[{"name":"L-kynurenine aminotransferase activity","type":"related"},{"name":"L-kynurenine:2-oxoglutarate aminotransferase activity","type":"related"},{"name":"kynurenine 2-oxoglutarate transaminase activity","type":"related"},{"name":"kynurenine aminotransferase activity","type":"broad"},{"name":"kynurenine transaminase (cyclizing)","type":"related"},{"name":"kynurenine--oxoglutarate aminotransferase activity","type":"related"},{"name":"kynurenine-oxoglutarate aminotransferase activity","type":"exact"}],"termid":"GO:0016212","terms_by_termid":{"GO:0016212":null}}


id: GO:0033678
data:
  {"annotated_genes":["SJAG_02242","SJAG_03780"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[100251,112909],"is_not":false,"summary":null,"term":"GO:0033678"}]},"cv_name":"molecular_function","definition":"Unwinding of a DNA/RNA duplex in the 5' to 3' direction, driven by ATP hydrolysis.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA/RNA helicase activity","termid":"GO:0033677"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02242":null,"SJAG_03780":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0140098","GO:0016853","GO:0003674","GO:0003824","GO:0140097"],"is_obsolete":false,"name":"5'-3' DNA/RNA helicase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-163120","GO:0033682"],"synonyms":[{"name":"5' to 3' DNA/RNA helicase activity","type":"exact"},{"name":"ATP-dependent 5' to 3' DNA/RNA helicase activity","type":"exact"},{"name":"ATP-dependent 5'-3' DNA/RNA helicase activity","type":"exact"}],"termid":"GO:0033678","terms_by_termid":{"GO:0033678":null}}


id: GO:0003091
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Renal process involved in the maintenance of an internal steady state of water in the body.","definition_xrefs":["GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal system process","termid":"GO:0003014"},{"relation_name":"is_a","term_name":"multicellular organismal-level water homeostasis","termid":"GO:0050891"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"renal water homeostasis","secondary_identifiers":["Reactome:R-HSA-432040"],"synonyms":[{"name":"water homeostasis by the renal system","type":"exact"}],"termid":"GO:0003091"}


id: PR:O94420
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC1620.13 gene.","definition_xrefs":["UniProtKB:O94420","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatase C1620.13 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1620.13","synonyms":[{"name":"Spom972h-SPCC1620.13","type":"exact"}],"termid":"PR:O94420"}


id: GO:0052404
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism stops, prevents, or reduces the frequency, rate or extent of symbiont protease activity, the catalysis of the hydrolysis of peptide bonds in a protein. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:tb","GOC:dph","GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation by host of symbiont peptidase activity (obsolete GO:0052404)","synonyms":[{"name":"down regulation by host of symbiont protease activity","type":"narrow"},{"name":"down-regulation by host of symbiont protease activity","type":"narrow"},{"name":"downregulation by host of symbiont protease activity","type":"narrow"},{"name":"inhibition by host of symbiont protease activity","type":"narrow"},{"name":"inhibition of symbiont protease activity","type":"narrow"},{"name":"negative regulation by host of symbiont protease activity","type":"narrow"}],"termid":"GO:0052404"}


id: PBO:0047556
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FGF12 antisense RNA 1","termid":"PBO:0047556"}


id: PBO:0050851
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intercellular adhesion molecule 4 (Landsteiner-Wiener blood group)","termid":"PBO:0050851"}


id: PBO:0076803
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tektin 4","termid":"PBO:0076803"}


id: GO:0034791
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: isobutylamine + NADPH + O2 = isobutylhydroxylamine + NADP+ + H2O.","definition_xrefs":["UM-BBD_reactionID:r1053"],"gene_count":0,"genotype_count":0,"name":"obsolete isobutylamine N-hydroxylase activity (obsolete GO:0034791)","termid":"GO:0034791"}


id: MONDO:0000478
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A dystonia that involves two or more unrelated body parts.","definition_xrefs":["DOID:0050837"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dystonic disorder","termid":"MONDO:0003441"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0003441"}],"interesting_parent_ids":["MONDO:0003441"],"is_obsolete":false,"name":"multifocal dystonia","termid":"MONDO:0000478","xrefs":{"Monarch":{"xref_id":"0000478"}}}


id: PBO:0029803
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-short_actin_cables","termid":"PBO:0029803"}


id: PATO:0000046
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000046 relative frequency (obsolete PATO:0000046)","termid":"PATO:0000046"}


id: PBO:0057707
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1294","termid":"PBO:0057707"}


id: GO:0018167
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The linkage of the chromophore phycoerythrobilin to phycoerythrin via phycoerythrobilin-bis-L-cysteine.","definition_xrefs":["RESID:AA0259"],"gene_count":0,"genotype_count":0,"name":"obsolete protein-phycoerythrobilin linkage via phycoerythrobilin-bis-L-cysteine (obsolete GO:0018167)","termid":"GO:0018167"}


id: PBO:0083992
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Glutathione-dependent oxidoreductase and glutathione S-transferase; hydroperoxide/superoxide-radical responsive monothiol glutaredoxin subfamily member with Grx3p and Grx5p; protects cells from oxidative damage with GRX3 and GRX5; with Grx3p, promotes dissociation of Aft1p from iron regulon gene promoters and subsequent nuclear export in iron-replete conditions, regulating iron homeostasis; involved with Grx3p in Sir2p deglutathionylation, restoring deacetylase activity after disulfide stress","termid":"PBO:0083992"}


id: PBO:0057123
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 206","termid":"PBO:0057123"}


id: PBO:0046769
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exosome component 9","termid":"PBO:0046769"}


id: PATO:0002320
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A superelptic shape inhering in a bearer by virtue of the bearer's shape resembling a diamond.","definition_xrefs":["PATO:WC"],"direct_ancestors":[{"relation_name":"is_a","term_name":"superelliptic","termid":"PATO:0002318"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diamond shaped","termid":"PATO:0002320"}


id: GO:0071183
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that contains two cell adhesion molecules, a protocadherin-alpha and a protocadherin-gamma, and is involved in the regulation of protein localization to the plasma membrane.","definition_xrefs":["PMID:15347688"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005886","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"protocadherin-alpha-protocadherin-gamma complex","termid":"GO:0071183"}


id: GO:1990165
data:
  {"annotated_genes":["SJAG_04410","SJAG_16460"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[77254,96242],"is_not":false,"summary":null,"term":"GO:1990165"}]},"cv_name":"molecular_function","definition":"Binding to damaged DNA containing single-strand breaks (SSBs).","definition_xrefs":["GOC:al","PMID:21984210"],"direct_ancestors":[{"relation_name":"is_a","term_name":"damaged DNA binding","termid":"GO:0003684"}],"gene_count":2,"genes_by_uniquename":{"SJAG_04410":null,"SJAG_16460":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003677","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"single-strand break-containing DNA binding","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"SSB-containing DNA binding","type":"exact"},{"name":"single-strand break-containing damaged DNA binding","type":"exact"}],"termid":"GO:1990165","terms_by_termid":{"GO:1990165":null}}


id: MONDO:0006081
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A melanoma arising from the anus. Clinical presentation includes rectal bleeding, tenesmus, pain, and change in bowel habit. The prognosis is usually poor.","definition_xrefs":["NCIT:C4639"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"intestinal neoplasm","termid":"MONDO:0021118"},{"relation_name":"is_a","term_name":"anus cancer","termid":"MONDO:0001879"},{"relation_name":"is_a","term_name":"rectum malignant melanoma","termid":"MONDO:0002167"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"anal melanoma","secondary_identifiers":["MEDGEN:91151","ONCOTREE:ARMM","SCTID:276821000","UMLS:C0349538","DOID:14145","EFO:1000080"],"synonyms":[{"name":"anal malignant melanoma","type":"exact"},{"name":"anal melanoma","type":"exact"},{"name":"anus melanoma","type":"exact"},{"name":"anus melanoma (disease)","type":"exact"},{"name":"malignant anus melanoma","type":"exact"},{"name":"malignant melanoma of anus","type":"exact"},{"name":"malignant melanoma of the anus","type":"exact"},{"name":"melanoma (disease) of anus","type":"exact"},{"name":"melanoma of anus","type":"exact"},{"name":"melanoma of the anus","type":"exact"}],"termid":"MONDO:0006081","xrefs":{"Monarch":{"xref_id":"0006081"}}}


id: PBO:0114751
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cohesin unloading factor (WAPL) Wpl1","termid":"PBO:0114751"}


id: MOD:01094
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to N6-carboxymethyl-L-lysine.","definition_xrefs":["Unimod:6#K","DeltaMass:237"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iodoacetic acid derivatized residue","termid":"MOD:00399"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N6-carboxymethyl-L-lysine","synonyms":[{"name":"Carboxymethyl","type":"related"},{"name":"Carboxymethyl Lysyl","type":"exact"},{"name":"Iodoacetic acid derivative","type":"related"}],"termid":"MOD:01094"}


id: PBO:0050013
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major histocompatibility complex, class I, A","termid":"PBO:0050013"}


id: MONDO:0003980
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare intracranial schwannoma that affects the jugular foramen.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peripheral nerve schwannoma","termid":"MONDO:0004820"},{"relation_name":"is_a","term_name":"skull neoplasm","termid":"MONDO:0024653"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"schwannoma of jugular foramen","secondary_identifiers":["MEDGEN:272780","NCIT:C5323","DOID:6735","UMLS:C1334300"],"synonyms":[{"name":"jugular Foramen neurilemmoma","type":"exact"},{"name":"jugular foramen schwannoma","type":"exact"},{"name":"neurilemmoma of jugular Foramen","type":"exact"},{"name":"neurilemmoma of the jugular Foramen","type":"exact"},{"name":"schwannoma of the jugular Foramen","type":"exact"}],"termid":"MONDO:0003980","xrefs":{"Monarch":{"xref_id":"0003980"}}}


id: PBO:0054823
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2236","termid":"PBO:0054823"}


id: FYPO:0006549
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which gene expression occurs to a lower extent than normal. One or more parts of gene expression, such as transcription or translation, may be affected, and all genes, or a specific subset of genes, may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal gene expression","termid":"FYPO:0006551"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0006551","FYPO:0005447"],"is_obsolete":false,"name":"decreased gene expression","synonyms":[{"name":"reduced gene expression","type":"exact"}],"termid":"FYPO:0006549"}


id: MONDO:0700151
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A brain or spinal cord tumor arising from glial cells that occurs in dogs.","definition_xrefs":["NCIT:C129297"],"direct_ancestors":[{"relation_name":"is_a","term_name":"canine neoplasm","termid":"MONDO:0700139"},{"relation_name":"is_a","term_name":"nervous system disorder, non-human animal","termid":"MONDO:1011336"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"canine glioma","termid":"MONDO:0700151","xrefs":{"Monarch":{"xref_id":"0700151"}}}


id: PBO:0000470
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.14.13.70","termid":"PBO:0000470"}


id: GO:0140414
data:
  {"annotated_genes":["SJAG_01238"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[76132],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000036"}]},"cv_name":"molecular_function","definition":"Binding a substrate via a thioester at the terminal thiol of a covalentely linked phosphopantetheine prosthetic group and mediating protein-protein interactions with cognate enzymes for processing or offloading of the thiol-bound substrate.","definition_xrefs":["PMID:17502372"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molecular carrier activity","termid":"GO:0140104"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01238":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140104"}],"interesting_parent_ids":["GO:0003674","GO:0140104"],"is_obsolete":false,"name":"phosphopantetheine-dependent carrier activity","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"carrier protein activity","type":"exact"}],"termid":"GO:0140414","terms_by_termid":{"GO:0000036":null}}


id: PBO:0091664
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane mannan endo-1,6-alpha-mannosidase Dfg502","termid":"PBO:0091664"}


id: PBO:0064155
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase A1 member A","termid":"PBO:0064155"}


id: PBO:0083583
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; transcription of both YLK153W and the overlapping essential gene GPM1 is reduced in the gcr1 null mutant","termid":"PBO:0083583"}


id: GO:0097193
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals in which an intracellular signal is conveyed to trigger the apoptotic death of a cell. The pathway starts with reception of an intracellular signal (e.g. DNA damage, endoplasmic reticulum stress, oxidative stress etc.), and ends when the execution phase of apoptosis is triggered. The intrinsic apoptotic signaling pathway is crucially regulated by permeabilization of the mitochondrial outer membrane (MOMP).","definition_xrefs":["PMID:17340152","GOC:mtg_apoptosis","PMID:18852119","GOC:yaf","PMID:11919192"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular signal transduction","termid":"GO:0035556"},{"relation_name":"is_a","term_name":"apoptotic signaling pathway","termid":"GO:0097190"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"intrinsic apoptotic signaling pathway","secondary_identifiers":["Reactome:R-HSA-109606","GO:0008629"],"synonyms":[{"name":"induction of apoptosis by intracellular signals","type":"related"},{"name":"intrinsic apoptosis","type":"narrow"},{"name":"intrinsic apoptotic pathway","type":"exact"},{"name":"intrinsic apoptotic signalling pathway","type":"exact"},{"name":"mitochondrial-mediated apoptotic pathway","type":"exact"}],"termid":"GO:0097193"}


id: PBO:0047901
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, aphidicolin type, common, fra(7)(q32.3)","termid":"PBO:0047901"}


id: MONDO:1012658
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any retinal degeneration that occurs in cats due to a mutation in the CEP290 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinal degeneration, domestic cat","termid":"MONDO:1011245"},{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinal degeneration, CEP290-related, domestic cat","secondary_identifiers":["OMIA:001244-9685"],"synonyms":[{"name":"late-onset hereditary retinal degeneration, domestic cat","type":"related"},{"name":"retinal degeneration II, domestic cat","type":"related"}],"termid":"MONDO:1012658","xrefs":{"Monarch":{"xref_id":"1012658"}}}


id: PBO:0078901
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gln (CTG) 10-1","termid":"PBO:0078901"}


id: GO:0180020
data:
  {"annotated_genes":["SJAG_04644","SJAG_01460","SJAG_01848","SJAG_05289","SJAG_03010","SJAG_03795","SJAG_02177"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[103825,108944,109021,115267,116573,118885,118974],"is_not":false,"summary":null,"term":"GO:0180020"}]},"cv_name":"molecular_function","definition":"The activity of bending or deforming a membrane. This activity can occur by multiple mechanisms including the insertion amphipathic domains into one or both leaflets.","definition_xrefs":["PMID:19780639"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molecular_function","termid":"GO:0003674"}],"gene_count":7,"genes_by_uniquename":{"SJAG_01460":null,"SJAG_01848":null,"SJAG_02177":null,"SJAG_03010":null,"SJAG_03795":null,"SJAG_04644":null,"SJAG_05289":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674"],"is_obsolete":false,"name":"membrane bending activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"membrane curving","type":"related"}],"termid":"GO:0180020","terms_by_termid":{"GO:0180020":null}}


id: PBO:0008889
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mating-type M-specific polypeptide matMc","termid":"PBO:0008889"}


id: PBO:0109458
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADP binding superfamily, involved in heme catabolism","termid":"PBO:0109458"}


id: MONDO:0020052
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete partial autosomal trisomy/tetrasomy (obsolete MONDO:0020052)","secondary_identifiers":["Orphanet:98132"],"termid":"MONDO:0020052","xrefs":{"Monarch":{"xref_id":"0020052"}}}


id: PR:P17871
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tbp1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P17871"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TATA-box-binding protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC29E6.08","synonyms":[{"name":"Spom972h-tbp1","type":"exact"},{"name":"TATA sequence-binding protein (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"TATA-binding factor (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"TATA-box factor (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"TBP (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"transcription initiation factor TFIID TBP subunit (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P17871"}


id: MONDO:0020501
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Crimean-Congo hemorrhagic fever (CCHF) is a tick-borne zoonotic disease caused by CCHF virus and characterized by initial fever, headache, and malaise followed by gastrointestinal symptoms and, in severe cases, bleeding, shock, and multi-organ system failure.","definition_xrefs":["Orphanet:99827"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral hemorrhagic fever","termid":"MONDO:0018087"},{"relation_name":"is_a","term_name":"vector-borne disease","termid":"MONDO:0100120"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Crimean-Congo hemorrhagic fever","secondary_identifiers":["MESH:D006479","SCTID:402919000","GARD:19690","UMLS:C0019099","icd11.foundation:1562906700","DOID:12287","ICD10CM:A98.0","ICD9:065.0","MEDGEN:6800","NCIT:C34682"],"synonyms":[{"name":"CCHF","type":"exact"},{"name":"CHF Congo virus","type":"exact"},{"name":"Congo fever","type":"exact"},{"name":"Congo hemorrhagic fever","type":"exact"},{"name":"Congo-Crimean hemorrhagic fever","type":"exact"},{"name":"Crimean hemorrhagic fever","type":"exact"},{"name":"Crimean hemorrhagic fever [CHF Congo virus]","type":"exact"},{"name":"Crimean-Congo haemorrhagic fever","type":"exact"}],"termid":"MONDO:0020501","xrefs":{"Monarch":{"xref_id":"0020501"}}}


id: PBO:0058104
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4319","termid":"PBO:0058104"}


id: GO:0061983
data:
  {"annotated_genes":["SJAG_00207","SJAG_04853","SJAG_00666","SJAG_03090","SJAG_04508","SJAG_00486","SJAG_03989","SJAG_00145","SJAG_00678","SJAG_04271","SJAG_00646"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88225,94195],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0051456"},{"annotations":[107207,105495,108091],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007135"},{"annotations":[112067,88362,113611],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0045144"},{"annotations":[102649,100504],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990950"},{"annotations":[95525],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1905191"}]},"cv_name":"biological_process","definition":"A process that coontributes to the second meiotic division. The second meiotic division separates chromatids resulting in a haploid number of chromosomes.","definition_xrefs":["PMID:29385397"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic cell cycle process","termid":"GO:1903046"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00145":null,"SJAG_00207":null,"SJAG_00486":null,"SJAG_00646":null,"SJAG_00666":null,"SJAG_00678":null,"SJAG_03090":null,"SJAG_03989":null,"SJAG_04271":null,"SJAG_04508":null,"SJAG_04853":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"meiosis II cell cycle process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"second meiotic division","type":"exact"}],"termid":"GO:0061983","terms_by_termid":{"GO:0007135":null,"GO:0045144":null,"GO:0051456":null,"GO:1905191":null,"GO:1990950":null}}


id: GO:0044869
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which a host organism decreases viral exo-alpha-sialidase activity, the catalysis of the hydrolysis of peptide bonds in a protein.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation by host of viral exo-alpha-sialidase activity (obsolete GO:0044869)","termid":"GO:0044869"}


id: GO:1902261
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of delayed rectifier potassium channel activity.","definition_xrefs":["PMID:11299204","GOC:BHF","GOC:rl","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of delayed rectifier potassium channel activity (obsolete GO:1902261)","synonyms":[{"name":"activation of delayed rectifier potassium channel activity","type":"narrow"},{"name":"up regulation of delayed rectifier potassium channel activity","type":"exact"},{"name":"up-regulation of delayed rectifier potassium channel activity","type":"exact"},{"name":"upregulation of delayed rectifier potassium channel activity","type":"exact"}],"termid":"GO:1902261"}


id: PBO:0041084
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BRMS1 like transcriptional repressor","termid":"PBO:0041084"}


id: GO:0098826
data:
  {"annotated_genes":["SJAG_03812","SJAG_01460","SJAG_03795","SJAG_00053","SJAG_03170","SJAG_01848"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[64782,109018,118970,119642],"is_not":false,"summary":null,"term":"GO:0098826"},{"annotations":[90766,104732],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0160219"}]},"cv_name":"cellular_component","definition":"The membrane of the endoplasmic reticulum tubular network.","definition_xrefs":["PMID:16469703"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endoplasmic reticulum membrane","termid":"GO:0005789"},{"relation_name":"part_of","term_name":"endoplasmic reticulum tubular network","termid":"GO:0071782"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00053":null,"SJAG_01460":null,"SJAG_01848":null,"SJAG_03170":null,"SJAG_03795":null,"SJAG_03812":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005783"},{"rel_name":"is_a","termid":"GO:0005789"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005783","GO:0005789","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"endoplasmic reticulum tubular network membrane","references_by_uniquename":{"GO_REF:0000104":null,"GO_REF:0000107":null,"PMID:21802294":null},"termid":"GO:0098826","terms_by_termid":{"GO:0098826":null,"GO:0160219":null}}


id: MONDO:0003056
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A WHO grade I meningioma characterized by the presence of prominent chronic inflammatory infiltrates that predominate over the meningioma cells.","definition_xrefs":["NCIT:C4720"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meningioma","termid":"MONDO:0016642"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lymphoplasmacyte-rich meningioma","secondary_identifiers":["DOID:4591","UMLS:C0431119","MEDGEN:140907"],"synonyms":[{"name":"lymphoplasmacyte-rich meningioma","type":"exact"},{"name":"lymphoplasmocyte-rich meningioma","type":"exact"},{"name":"lymphoplasmocyte-rich meningioma (morphologic abnormality)","type":"exact"}],"termid":"MONDO:0003056","xrefs":{"Monarch":{"xref_id":"0003056"}}}


id: PBO:0052261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysine demethylase 2B","termid":"PBO:0052261"}


id: GO:0043994
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + histone H3 L-lysine (position 23) = CoA + histone H3 N6-acetyl-L-lysine (position 23).","definition_xrefs":["PMID:19056256","PMID:18552846"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H3 acetyltransferase activity","termid":"GO:0010484"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0034212"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0016746","GO:0034212","GO:0003824","GO:0003674","GO:0016740","GO:0140096"],"is_obsolete":false,"name":"histone H3K23 acetyltransferase activity","synonyms":[{"name":"histone H3-K23 acetyltransferase activity","type":"exact"},{"name":"histone acetylase activity (H3-K23 specific)","type":"exact"},{"name":"histone acetyltransferase activity (H3-K23 specific)","type":"exact"},{"name":"histone lysine N-acetyltransferase activity (H3-K23 specific)","type":"exact"}],"termid":"GO:0043994"}


id: GO:0046361
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving 2-oxobutyrate, the anion of the organic acid 2-oxobutyric acid, which contains a ketone group on carbon 2.","definition_xrefs":["PMID:17034760"],"direct_ancestors":[{"relation_name":"is_a","term_name":"short-chain fatty acid metabolic process","termid":"GO:0046459"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"2-oxobutyrate metabolic process","synonyms":[{"name":"2-oxobutyrate metabolism","type":"exact"},{"name":"alpha-ketobutyrate metabolic process","type":"exact"},{"name":"alpha-ketobutyrate metabolism","type":"exact"}],"termid":"GO:0046361"}


id: GO:0019411
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The metabolic process in which ferrous ions (Fe2+) are oxidized to ferric ions (Fe3+) to generate energy, coupled to the reduction of carbon dioxide.","definition_xrefs":["ISBN:3131084111"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aerobic respiration","termid":"GO:0009060"},{"relation_name":"is_a","term_name":"energy derivation by oxidation of reduced inorganic compounds","termid":"GO:0015975"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0006091","GO:0008150"],"is_obsolete":false,"name":"aerobic respiration, using ferrous ions as electron donor","termid":"GO:0019411"}


id: PBO:0089872
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dolichyl-phosphate beta-D-mannosyltransferase catalytic subunit Dpm1","termid":"PBO:0089872"}


id: PBO:0089299
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"shelterin complex subunit Poz1","termid":"PBO:0089299"}


id: MONDO:0001746
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Optic disk bodies composed primarily of acid mucopolysaccharides that may produce pseudopapilledema (elevation of the optic disk without associated intracranial hypertension) and visual field deficits. Drusen may also occur in the retina (see retinal drusen). (Miller et al., Clinical Neuro-Ophthalmology, 4th ed, p355)","definition_xrefs":["MESH:D015594"],"direct_ancestors":[{"relation_name":"is_a","term_name":"optic nerve disorder","termid":"MONDO:0002135"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"optic disk drusen","secondary_identifiers":["SCTID:33629003","DOID:13561","ICD9:377.21","UMLS:C0029128","MEDGEN:14495"],"synonyms":[{"name":"drusen of optic disc","type":"exact"},{"name":"drusen of optic disk","type":"exact"},{"name":"optic nerve head drusen","type":"exact"}],"termid":"MONDO:0001746","xrefs":{"Monarch":{"xref_id":"0001746"}}}


id: MOD:00136
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to pyruvic acid.","definition_xrefs":["PubMed:3042771","Unimod:382","PubMed:10085076","PubMed:8464063","RESID:AA0127#CYS"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"},{"relation_name":"is_a","term_name":"pyruvic acid","termid":"MOD:01154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"pyruvic acid (Cys)","synonyms":[{"name":"2-oxopropanoic acid","type":"exact"},{"name":"MOD_RES Pyruvic acid (Cys)","type":"exact"},{"name":"Pyruv(Cys)","type":"exact"},{"name":"pyruvic acid","type":"exact"}],"termid":"MOD:00136"}


id: MONDO:0858956
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A central nervous system benign neoplasm that is characterized by the presence of clear glial neoplastic cells reminiscent of oligodendroglioma.","definition_xrefs":["DOID:0081302"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system organ benign neoplasm","termid":"MONDO:0000628"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diffuse leptomeningeal glioneuronal tumor","secondary_identifiers":["MEDGEN:1391318","NCIT:C129424","UMLS:C4329735"],"termid":"MONDO:0858956","xrefs":{"Monarch":{"xref_id":"0858956"}}}


