# terms

id: GO:0014817
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell becomes capable of differentiating autonomously into a skeletal muscle satellite cell in an environment that is neutral with respect to the developmental pathway. Upon specification, the cell fate can be reversed.","definition_xrefs":["GOC:ef","GOC:mtg_muscle","PMID:16607119"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate specification","termid":"GO:0001708"},{"relation_name":"part_of","term_name":"skeletal muscle satellite cell commitment","termid":"GO:0014813"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"skeletal muscle satellite cell fate specification","termid":"GO:0014817"}


id: GO:0035369
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An immunoglobulin-like complex that is present in at least the plasma membrane of pre-B cells, and that is composed of two identical immunoglobulin heavy chains and two surrogate light chains, each composed of the lambda-5 and VpreB proteins, and a signaling subunit, a heterodimer of the Ig-alpha and Ig-beta proteins.","definition_xrefs":["ISBN:0781765196","GOC:add","PMID:16464608","PMID:17306522"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"pre-B cell receptor complex","synonyms":[{"name":"pre-BCR","type":"exact"}],"termid":"GO:0035369"}


id: GO:0140641
data:
  {"annotated_genes":["SJAG_03073","SJAG_01613"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[99590,101804],"is_not":false,"summary":null,"term":"GO:0140641"}]},"cv_name":"biological_process","definition":"The spindle organization process in which the spindle is maintained at a constant length during mitotic metaphase.","definition_xrefs":["PMID:32723864"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitotic spindle assembly","termid":"GO:0090307"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01613":null,"SJAG_03073":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0000070"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0000226"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0000226","GO:0007010","GO:0044085","GO:0000070","GO:0008150","GO:0007049"],"is_obsolete":false,"name":"mitotic spindle formation (spindle phase two)","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"metaphase spindle stability","type":"exact"},{"name":"metaphase spindle stabilization","type":"exact"}],"termid":"GO:0140641","terms_by_termid":{"GO:0140641":null}}


id: GO:0090073
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that increases the frequency, rate or extent of protein homodimerization, interacting selectively with an identical protein to form a homodimer.","definition_xrefs":["GOC:tb","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of protein homodimerization activity (obsolete GO:0090073)","termid":"GO:0090073"}


id: PBO:0089497
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coenzyme A diphosphatase","termid":"PBO:0089497"}


id: MONDO:0700087
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Usher syndrome in which the cause of the disease is a mutation in the MYO7A gene","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Usher syndrome type 1","termid":"MONDO:0010168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"Usher syndrome type 1B","secondary_identifiers":["OMIM:276900","MESH:C536485","GARD:5436","MEDGEN:419358","UMLS:C2931206"],"synonyms":[{"name":"Usher syndrome, type 1B","type":"exact"}],"termid":"MONDO:0700087","xrefs":{"Monarch":{"xref_id":"0700087"}}}


id: MONDO:0016571
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Macrocephaly-short stature-paraplegia syndrome is characterized by macrocephaly and midface hypoplasia, intellectual deficit, short stature, spastic paraplegia and severe central nervous system anomalies (hydrocephalus and Dandy-Walker malformation). It has been described in two unrelated adults.","definition_xrefs":["Orphanet:2427"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"central nervous system malformation","termid":"MONDO:0020022"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0020022"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0020022"],"is_obsolete":false,"name":"macrocephaly-short stature-paraplegia syndrome","secondary_identifiers":["MEDGEN:419845","UMLS:C2931595","GARD:172","SCTID:722033000","MESH:C537718"],"synonyms":[{"name":"Volcke Soekarman syndrome","type":"exact"},{"name":"Volcke-Soekarman syndrome","type":"exact"},{"name":"macrocephaly, intellectual disability, short stature, spastic paraplegia and cns malformations","type":"exact"}],"termid":"MONDO:0016571","xrefs":{"Monarch":{"xref_id":"0016571"}}}


id: GO:0080024
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving indolebutyric acid, a compound that serves as an active or storage form of the hormone indole-3-acetic acid (an auxin) in many plants.","definition_xrefs":["PMID:18725356"],"direct_ancestors":[{"relation_name":"is_a","term_name":"auxin metabolic process","termid":"GO:0009850"},{"relation_name":"is_a","term_name":"monocarboxylic acid metabolic process","termid":"GO:0032787"},{"relation_name":"is_a","term_name":"indole-containing compound metabolic process","termid":"GO:0042430"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"indolebutyric acid metabolic process","synonyms":[{"name":"IBA metabolic process","type":"exact"},{"name":"IBA metabolism","type":"exact"},{"name":"indole-3-butyric acid metabolic process","type":"narrow"}],"termid":"GO:0080024"}


id: MONDO:0026426
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"X inactivation, familial skewed","termid":"MONDO:0100209"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"X inactivation, familial skewed, 2","secondary_identifiers":["MESH:C564572","UMLS:C1846257","OMIM:300179","MEDGEN:335376"],"synonyms":[{"name":"SXI2","type":"related"},{"name":"X INACTIVATION, FAMILIAL SKEWED, 2","type":"related"},{"name":"X-inactivation, familial skewed, 2","type":"exact"}],"termid":"MONDO:0026426","xrefs":{"Monarch":{"xref_id":"0026426"}}}


id: GO:2000130
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of octopamine signaling pathway.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of octopamine or tyramine signaling pathway","termid":"GO:2000127"},{"relation_name":"is_a","term_name":"regulation of octopamine signaling pathway","termid":"GO:2000128"},{"relation_name":"positively_regulates","term_name":"octopamine signaling pathway","termid":"GO:0071927"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of octopamine signaling pathway","synonyms":[{"name":"positive regulation of octopamine signalling pathway","type":"exact"}],"termid":"GO:2000130"}


id: PBO:0076486
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TARDBP pseudogene 1","termid":"PBO:0076486"}


id: PBO:0004462
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Accumulation of Condensin at RDNA","termid":"PBO:0004462"}


id: GO:0032239
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the directed movement of nucleobases, nucleosides, nucleotides and nucleic acids, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transport","termid":"GO:0051049"},{"relation_name":"regulates","term_name":"nucleobase-containing compound transport","termid":"GO:0015931"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of nucleobase-containing compound transport","synonyms":[{"name":"regulation of nucleobase, nucleoside, nucleotide and nucleic acid transport","type":"related"}],"termid":"GO:0032239"}


id: PBO:0031426
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_tert-butyl_hydroperoxide","termid":"PBO:0031426"}


id: MONDO:0020454
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenital complete agenesis of pericardium is a rare, mostly asymptomatic, congenital heart malformation characterized by the complete absence of the entire pericardium, or by the absence of either the right (uncommon) or left pericardium. It is occasionally associated with chest pain (common), dyspnea, dizziness, bradycardia and syncope, while exertional manifestations are rare. The disease is usually incidentally diagnosed during surgery or at autopsy.","definition_xrefs":["Orphanet:99129"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital pericardium anomaly","termid":"MONDO:0017300"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital complete agenesis of pericardium","secondary_identifiers":["GARD:19666"],"termid":"MONDO:0020454","xrefs":{"Monarch":{"xref_id":"0020454"}}}


id: MONDO:0859331
data:
  {"annotated_genes":["SJAG_02873"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85957],"is_not":false,"summary":null,"term":"MONDO:0859331"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02873":null},"genotype_count":0,"is_obsolete":false,"name":"Rabin-Pappas syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:620155","UMLS:C5774269","MEDGEN:1824042"],"termid":"MONDO:0859331","terms_by_termid":{"MONDO:0859331":null},"xrefs":{"Monarch":{"xref_id":"0859331"}}}


id: PBO:0065680
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidyl-tRNA hydrolase 2","termid":"PBO:0065680"}


id: GO:0005054
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete peroxisome integral membrane receptor (obsolete GO:0005054)","synonyms":[{"name":"Pas20p","type":"related"},{"name":"peroxisome integral membrane receptor","type":"exact"}],"termid":"GO:0005054"}


id: PATO:0002277
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality of certain surfaces which appear to change colour as the angle of view changes.","direct_ancestors":[{"relation_name":"is_a","term_name":"variant color","termid":"PATO:0001615"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iridescent","termid":"PATO:0002277"}


id: PBO:0062731
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 52 subfamily B member 5 pseudogene","termid":"PBO:0062731"}


id: PBO:0089804
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase AMPK (gamma) subunit Cbs2","termid":"PBO:0089804"}


id: MONDO:0006757
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Impairment of the bile flow caused by an obstruction in the portion of the bile duct system located outside of the liver.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cholestasis","termid":"MONDO:0001751"},{"relation_name":"is_a","term_name":"non-neoplastic bile duct disorder","termid":"MONDO:0006322"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0002515"],"is_obsolete":false,"name":"extrahepatic cholestasis","secondary_identifiers":["MESH:D001651","MEDGEN:2241","UMLS:C0005398","MedDRA:10008637","SCTID:8262006","DOID:13619","EFO:1000933"],"synonyms":[{"name":"cholestasis of extrahepatic bile duct","type":"exact"},{"name":"extrahepatic bile duct cholestasis","type":"exact"},{"name":"extrahepatic biliary stasis","type":"exact"},{"name":"extrahepatic cholestasis (finding)","type":"exact"},{"name":"extrahepatic obstructive biliary disease","type":"exact"}],"termid":"MONDO:0006757","xrefs":{"Monarch":{"xref_id":"0006757"}}}


id: PBO:0034571
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_meiotic_recombination_at_hotspot","termid":"PBO:0034571"}


id: PBO:0083738
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential component of the Arp2/3 complex; Arp2/3 is a highly conserved actin nucleation center required for the motility and integrity of actin patches; involved in endocytosis and membrane growth and polarity; required for efficient Golgi-to-ER trafficking in COPI mutants","termid":"PBO:0083738"}


id: PBO:0068505
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 94, pseudogene","termid":"PBO:0068505"}


id: PBO:0081663
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 585B","termid":"PBO:0081663"}


id: PBO:0016979
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific protein Adg1","termid":"PBO:0016979"}


id: PBO:0017715
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by A. thaliana GRF9","termid":"PBO:0017715"}


id: GO:0047684
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-glucose + an arylamine = UDP + an N-D-glucosylarylamine.","definition_xrefs":["EC:2.4.1.71","MetaCyc:ARYLAMINE-GLUCOSYLTRANSFERASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016757","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"arylamine glucosyltransferase activity","synonyms":[{"name":"UDP glucose-arylamine glucosyltransferase activity","type":"related"},{"name":"UDP-glucose:arylamine N-D-glucosyltransferase activity","type":"related"},{"name":"UDPglucose:arylamine N-D-glucosyltransferase activity","type":"related"},{"name":"uridine diphosphoglucose-arylamine glucosyltransferase activity","type":"related"}],"termid":"GO:0047684"}


id: PBO:0083843
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Exomer-dependent cargo protein; induces appearance of [PIN+] prion when overproduced; prion-like domain serves as a retention signal in the trans-Golgi network; predicted to be palmitoylated","termid":"PBO:0083843"}


id: PBO:0040904
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BMS1 pseudogene 8","termid":"PBO:0040904"}


id: GO:0062247
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A intracellular vesicle that is part of a chloroplast.","definition_xrefs":["PMID:32245810"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic vesicle","termid":"GO:0031410"},{"relation_name":"part_of","term_name":"chloroplast","termid":"GO:0009507"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0031410","GO:0005575"],"is_obsolete":false,"name":"chloroplast vesicle","termid":"GO:0062247"}


id: GO:0036193
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-hydroxy-2H-1,4-benzoxazin-3(4H)-one + O2 + reduced [NADPH--hemoprotein reductase] = DIBOA + H+ + H2O + oxidized [NADPH--hemoprotein reductase].","definition_xrefs":["RHEA:31939"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen","termid":"GO:0016712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"2-hydroxy-1,4-benzoxazin-3-one monooxygenase activity","secondary_identifiers":["KEGG_REACTION:R07423","EC:1.14.14.110"],"termid":"GO:0036193"}


id: MONDO:0015956
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Rare hereditary ataxia.","definition_xrefs":["MONDO:patterns/rare"],"gene_count":0,"genotype_count":0,"name":"obsolete rare hereditary ataxia (obsolete MONDO:0015956)","termid":"MONDO:0015956","xrefs":{"Monarch":{"xref_id":"0015956"}}}


id: PBO:0028416
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_meiosis_II","termid":"PBO:0028416"}


id: FYPO:0003856
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to FR901464. Cells stop growing (and may die) at a concentration of FR901464 that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002683"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002683","FYPO:0000139","FYPO:0000003","FYPO:0001985"],"is_obsolete":false,"name":"sensitive to FR901464","synonyms":[{"name":"hypersensitive to FR901464","type":"exact"},{"name":"sensitive to FR901464 during mitotic cell cycle","type":"related"},{"name":"sensitive to FR901464 during vegetative growth","type":"exact"}],"termid":"FYPO:0003856"}


id: GO:0032839
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"All of the contents of a dendrite, excluding the surrounding plasma membrane.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron projection cytoplasm","termid":"GO:0120111"},{"relation_name":"part_of","term_name":"dendrite","termid":"GO:0030425"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"dendrite cytoplasm","synonyms":[{"name":"dendritic cytoplasm","type":"exact"}],"termid":"GO:0032839"}


id: PBO:0072084
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S12 pseudogene 14","termid":"PBO:0072084"}


id: PBO:0018041
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-myristoyltransferase Myr1 (predicted)","termid":"PBO:0018041"}


id: FYPO:0006753
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which dimethylation of lysine at position 20 of histone H4 in heterochromatin at subtelomeric regions occurs to a lower extent than normal.","definition_xrefs":["PMID:29632066","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased H4-K20 dimethylation during vegetative growth","termid":"FYPO:0005028"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0002274"],"is_obsolete":false,"name":"decreased histone H4-K20 dimethylation at subtelomeric heterochromatin during vegetative growth","synonyms":[{"name":"decreased histone H4 K20 dimethylation at subtelomeric heterochromatin during vegetative growth","type":"exact"},{"name":"decreased histone H4-K20 dimethylation at subtelomeres during vegetative growth","type":"exact"},{"name":"decreased histone H4-K20 dimethylation at subtelomeric heterochromatin during mitotic cell cycle","type":"related"},{"name":"decreased histone H4-K20 dimethylation at telomeric heterochromatin during vegetative growth","type":"related"},{"name":"decreased histone H4K20me2 at subtelomeric heterochromatin during vegetative growth","type":"exact"},{"name":"decreased histone lysine H4 K20 dimethylation at subtelomeric heterochromatin during vegetative growth","type":"exact"},{"name":"reduced histone H4-K20 dimethylation at subtelomeric heterochromatin during vegetative growth","type":"exact"}],"termid":"FYPO:0006753"}


id: PBO:0057806
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3128","termid":"PBO:0057806"}


id: FYPO:0003030
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of mRNA splicing via the spliceosome is decreased, where introns have low A/U content and polypyrimidine tracts located approximately 17-19 nt distal to the branch site.","definition_xrefs":["PomBase:mah","PMID:24298023"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased splicing of mRNA introns with low A/U content","termid":"FYPO:0003242"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0000294","FYPO:0006551","FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"decreased splicing of mRNA introns with low A/U content and polypyrimidine tracts distal to branch site","synonyms":[{"name":"decreased mRNA splicing, via spliceosome, introns with low A/U content and polypyrimidine tracts distal to branch site","type":"exact"},{"name":"decreased nuclear mRNA splicing, via spliceosome, introns with low A/U content and polypyrimidine tracts distal to branch site","type":"exact"},{"name":"decreased splicing of mRNA introns with low A/U content and polypyrimidine tracts distal to branch site","type":"broad"},{"name":"decreased splicing of mRNA introns with low A/U content and polypyrimidine tracts distal to branch site during mitotic cell cycle","type":"related"},{"name":"decreased splicing of mRNA introns with low A/U content and polypyrimidine tracts distal to branch site during vegetative growth","type":"exact"},{"name":"reduced splicing of mRNA introns with low A/U content and polypyrimidine tracts distal to branch site","type":"exact"}],"termid":"FYPO:0003030"}


id: GO:0044032
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The alteration by an organism of the levels of indole acetic acid in the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by symbiont of indole acetic acid levels in host (obsolete GO:0044032)","synonyms":[{"name":"modulation by symbiont of IAA levels in host","type":"exact"},{"name":"modulation by symbiont of auxin levels in host","type":"broad"}],"termid":"GO:0044032"}


id: PBO:0039883
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARHGAP42 antisense RNA 1","termid":"PBO:0039883"}


id: GO:0019183
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that forms a transmembrane channel through which chloride ions may pass in response to histamine binding to the channel complex or one of its constituent parts.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chloride channel complex","termid":"GO:0034707"},{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005886","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"histamine-gated chloride channel complex","termid":"GO:0019183"}


id: MONDO:0006429
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare Hodgkin lymphoma that arises from the spleen.","definition_xrefs":["NCIT:C7295"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Hodgkins lymphoma","termid":"MONDO:0004952"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"splenic hodgkin lymphoma","secondary_identifiers":["UMLS:C0153791","SCTID:93527005","MEDGEN:56323"],"synonyms":[{"name":"Hodgkin's disease of spleen","type":"exact"},{"name":"Hodgkin's disease of the spleen","type":"exact"},{"name":"Hodgkin's lymphoma of spleen","type":"exact"},{"name":"Hodgkin's lymphoma of the spleen","type":"exact"},{"name":"primary splenic Hodgkin's lymphoma","type":"exact"},{"name":"splenic Hodgkin's disease","type":"exact"},{"name":"splenic Hodgkin's lymphoma","type":"exact"},{"name":"splenic Hodgkins lymphoma","type":"exact"}],"termid":"MONDO:0006429","xrefs":{"Monarch":{"xref_id":"0006429"}}}


id: PR:G2TRQ5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC3E7.17 gene.","definition_xrefs":["PRO:DNx","UniProtKB:G2TRQ5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C3E7.17 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3E7.17","synonyms":[{"name":"Spom972h-SPBC3E7.17","type":"exact"}],"termid":"PR:G2TRQ5"}


id: PBO:0113802
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human KIN ortholog, implicated in DNA metabolism and RNA processing","termid":"PBO:0113802"}


id: GO:0007133
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell cycle phase during which chromosomes separate and migrate towards the poles of the spindle the as part of meiosis I.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiosis I cell cycle phase","termid":"GO:0098764"},{"relation_name":"part_of","term_name":"anaphase","termid":"GO:0051322"},{"relation_name":"part_of","term_name":"meiotic M phase","termid":"GO:0051327"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0051327"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051327"],"is_obsolete":false,"name":"meiotic anaphase I","termid":"GO:0007133"}


id: GO:0035701
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of a hematopoietic stem cell from one site to another. A hematopoietic stem cell is a cell from which all cells of the lymphoid and myeloid lineages develop, including blood cells and cells of the immune system.","definition_xrefs":["GOC:BHF","PMID:20234092","CL:0000037"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell migration","termid":"GO:0016477"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hematopoietic stem cell migration","synonyms":[{"name":"hemopoietic stem cell migration","type":"exact"}],"termid":"GO:0035701"}


id: MONDO:0859524
data:
  {"annotated_genes":["SJAG_04115"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86949],"is_not":false,"summary":null,"term":"MONDO:0859524"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant nonsyndromic hearing loss","termid":"MONDO:0019587"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04115":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019497"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0019497","MONDO:0000426"],"is_obsolete":false,"name":"hearing loss, autosomal dominant 86","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1840976","OMIM:620280","UMLS:C5830340"],"termid":"MONDO:0859524","terms_by_termid":{"MONDO:0859524":null},"xrefs":{"Monarch":{"xref_id":"0859524"}}}


id: MONDO:0020464
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Euryblepharon is a rare congenital eyelid anomaly of unknown etiology characterized by the bilateral horizontal enlargement of the palpebral fissure with vertically shortened eyelids, lateral canthus malpositioning and lateral ectropion. It may be isolated or associated with other ocular anomalies (e.g. strabismus or telecanthus) or systemic anomalies (e.g. blepharo-cheilo-odontic syndrome). In severe cases, it may result in lagophthalmos and exposure keratopathy, requiring surgical treatment.","definition_xrefs":["Orphanet:99172"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital ectropion","termid":"MONDO:0020161"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"euryblepharon","secondary_identifiers":["icd11.foundation:2086603843","GARD:19674","MEDGEN:724511","SCTID:400954002","UMLS:C1303001"],"termid":"MONDO:0020464","xrefs":{"Monarch":{"xref_id":"0020464"}}}


id: PBO:0027821
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_single-stranded_DNA_binding","termid":"PBO:0027821"}


id: PBO:0089391
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation initiation regulator, HEAT repeat protein Gcn1","termid":"PBO:0089391"}


id: PBO:0056047
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LTV1 ribosome biogenesis factor","termid":"PBO:0056047"}


id: GO:2000406
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of T cell migration.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of lymphocyte migration","termid":"GO:2000403"},{"relation_name":"is_a","term_name":"regulation of T cell migration","termid":"GO:2000404"},{"relation_name":"positively_regulates","term_name":"T cell migration","termid":"GO:0072678"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of T cell migration","synonyms":[{"name":"positive regulation of T lymphocyte migration","type":"exact"},{"name":"positive regulation of T-cell migration","type":"exact"},{"name":"positive regulation of T-lymphocyte migration","type":"exact"}],"termid":"GO:2000406"}


id: PR:O13994
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- kei1 gene.","definition_xrefs":["UniProtKB:O13994","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol phoshorylceramide synthase regulatory subunit kei1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC26H5.13c","synonyms":[{"name":"ICP synthase regulatory subunit kei1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-kei1","type":"exact"}],"termid":"PR:O13994"}


id: GO:0035363
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A nuclear body associated with the histone gene locus that is thought to contain all of the factors necessary for histone mRNA transcription and pre-mRNA processing. In Drosophila, U7 snRNP is located in the histone locus body rather than the distinct Cajal body.","definition_xrefs":["PMID:19620235","PMID:16533947","PMID:18927579","GOC:sart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear ribonucleoprotein granule","termid":"GO:0140168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"part_of","termid":"GO:0005654"}],"interesting_parent_ids":["GO:0005634","GO:0005654","GO:0005575"],"is_obsolete":false,"name":"histone locus body","synonyms":[{"name":"HLB","type":"exact"}],"termid":"GO:0035363"}


id: PBO:0005396
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lsk1 complex gamma subunit (predicted)","termid":"PBO:0005396"}


id: GO:0060455
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate frequency or extent of gastric secretion. Gastric secretion is the regulated release of gastric acid (hydrochloric acid) by parietal or oxyntic cells during digestion.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of secretion","termid":"GO:0051048"},{"relation_name":"is_a","term_name":"regulation of gastric acid secretion","termid":"GO:0060453"},{"relation_name":"is_a","term_name":"negative regulation of digestive system process","termid":"GO:0060457"},{"relation_name":"negatively_regulates","term_name":"gastric acid secretion","termid":"GO:0001696"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of gastric acid secretion","termid":"GO:0060455"}


id: GO:0045110
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of the bundles of intermediate filaments. Intermediate filament-associated proteins (IFAPs) cross-link intermediate filaments with one another, forming a bundle or a network, and with other cell structures, including the plasma membrane. The organization of intermediate filaments and their supportive function in various cells types depends in large part on their linkage to other cell structures via IFAPs.","definition_xrefs":["ISBN:0716731363"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component assembly","termid":"GO:0022607"},{"relation_name":"is_a","term_name":"intermediate filament organization","termid":"GO:0045109"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0007010"],"is_obsolete":false,"name":"intermediate filament bundle assembly","synonyms":[{"name":"tonofilament assembly","type":"narrow"}],"termid":"GO:0045110"}


id: GO:0035204
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of lamellocyte differentiation. Lamellocytes differentiate massively in the lymph glands after parasitization and are large flat cells devoted to encapsulation of invaders too large to be phagocytosed by plasmatocytes.","definition_xrefs":["PMID:14734104"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of lamellocyte differentiation","termid":"GO:0035203"},{"relation_name":"is_a","term_name":"negative regulation of hemocyte differentiation","termid":"GO:0045611"},{"relation_name":"negatively_regulates","term_name":"lamellocyte differentiation","termid":"GO:0035171"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of lamellocyte differentiation","synonyms":[{"name":"down regulation of lamellocyte differentiation","type":"exact"},{"name":"down-regulation of lamellocyte differentiation","type":"exact"},{"name":"downregulation of lamellocyte differentiation","type":"exact"},{"name":"inhibition of lamellocyte differentiation","type":"narrow"}],"termid":"GO:0035204"}


id: PR:Q9USN1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A sorting nexin-25 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04483","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin-12 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC16A11.04","secondary_identifiers":["UniProtKB:Q9USN1"],"synonyms":[{"name":"Spom972h-SNX25","type":"exact"}],"termid":"PR:Q9USN1"}


id: PBO:0027776
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_2-bromo-2-(((4-methylphenyl)sulfonyl)methyl)-1-indanone","termid":"PBO:0027776"}


id: FYPO:0006072
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the addition of one or more uridylyl residues to the 3' end of a small RNA (sRNA) molecule does not occur.","definition_xrefs":["PomBase:mah","PMID:28541282"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal RNA processing","termid":"FYPO:0001553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000294","FYPO:0001320","FYPO:0001985","FYPO:0006551","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abolished small RNA 3' uridylation","synonyms":[{"name":"abolished sRNA 3' uridylation","type":"exact"},{"name":"abolished small RNA 3' uridylation during mitotic cell cycle","type":"related"},{"name":"abolished small RNA 3' uridylation during vegetative growth","type":"exact"},{"name":"abolished small regulatory RNA 3' uridylation","type":"exact"},{"name":"small RNA 3' uridylation abolished","type":"exact"}],"termid":"FYPO:0006072"}


id: MONDO:0001639
data:
  {"annotated_genes":["SJAG_01007","SJAG_03447","SJAG_04459","SJAG_04425","SJAG_04042","SJAG_01199"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85710],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009238"},{"annotations":[85617,85618],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009354"},{"annotations":[86226],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009609"},{"annotations":[87046],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010184"},{"annotations":[85463],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008787"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"anemia","termid":"MONDO:0002280"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01007":null,"SJAG_01199":null,"SJAG_03447":null,"SJAG_04042":null,"SJAG_04425":null,"SJAG_04459":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0002280"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0002280"],"is_obsolete":false,"name":"deficiency anemia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:13121","ICD9:281.8","SCTID:267513007","UMLS:C0041782","MEDGEN:508256","ICD9:281.9"],"synonyms":[{"name":"deficiency anemias","type":"exact"},{"name":"unspecified deficiency anaemia","type":"exact"},{"name":"unspecified deficiency anemia","type":"exact"}],"termid":"MONDO:0001639","terms_by_termid":{"MONDO:0008787":null,"MONDO:0009238":null,"MONDO:0009354":null,"MONDO:0009609":null,"MONDO:0010184":null},"xrefs":{"Monarch":{"xref_id":"0001639"}}}


id: MONDO:0008735
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial glucocorticoid deficiency","termid":"MONDO:0008733"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adrenocortical unresponsiveness to ACTH with postreceptor defect","secondary_identifiers":["GARD:15133","OMIM:202355","MEDGEN:348507","MESH:C565971","UMLS:C1859971"],"synonyms":[{"name":"adrenocortical unresponsiveness to ACTH with postreceptor defect","type":"exact"},{"name":"familial glucocorticoid deficiency due to defect distal to ACTH receptor","type":"related"}],"termid":"MONDO:0008735","xrefs":{"Monarch":{"xref_id":"0008735"}}}


id: PBO:0058405
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4775","termid":"PBO:0058405"}


id: FYPO:0002196
data:
  {"alleles_by_uniquename":{"SJAG_00028:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00028","name":"rga6delta","uniquename":"SJAG_00028:allele-1"},"SJAG_00266:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00266","name":"atf1delta","uniquename":"SJAG_00266:allele-1"},"SJAG_00514:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00514","name":"scd1delta","uniquename":"SJAG_00514:allele-1"},"SJAG_01794:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01794","name":"scd2delta","uniquename":"SJAG_01794:allele-1"},"SJAG_02592:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02592","name":"sty1delta","uniquename":"SJAG_02592:allele-1"},"SJAG_02819:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02819","name":"efc25delta","uniquename":"SJAG_02819:allele-1"},"SJAG_03048:allele-1":{"allele_type":"amino_acid_mutation","description":"G146D","gene_uniquename":"SJAG_03048","name":"cdc2-1w","uniquename":"SJAG_03048:allele-1"},"SJAG_03453:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03453","name":"ras1delta","uniquename":"SJAG_03453:allele-1"},"SJAG_03581:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03581","name":"gef1delta","uniquename":"SJAG_03581:allele-1"},"SJAG_04280:allele-2":{"allele_type":"amino_acid_mutation","description":"T582G","gene_uniquename":"SJAG_04280","name":"wee1-as8","uniquename":"SJAG_04280:allele-2"},"SJAG_04312:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04312","name":"pka1delta","uniquename":"SJAG_04312:allele-1"},"SJAG_04332:allele-1":{"allele_type":"amino_acid_mutation","description":"I30T,T572P","gene_uniquename":"SJAG_04332","name":"cdc25-D9","uniquename":"SJAG_04332:allele-1"},"SJAG_04522:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04522","name":"rga4delta","uniquename":"SJAG_04522:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[119712,119700,119862],"is_not":false,"rel_names":["is_a","has_part"],"summary":null,"term":"FYPO:0001122"},{"annotations":[119568],"is_not":false,"rel_names":["is_a","has_part"],"summary":null,"term":"FYPO:0007701"},{"annotations":[119936,119931,119942,119968],"is_not":false,"rel_names":["has_part","is_a"],"summary":null,"term":"FYPO:0002380"},{"annotations":[119839,119846,119840],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001877"},{"annotations":[119845,119844],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0006616"}]},"cv_name":"fission_yeast_phenotype","definition":"A 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id: MONDO:0044792
data:
  {"annotated_genes":["SJAG_03453"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87159],"is_not":false,"summary":null,"term":"MONDO:0044792"}]},"cv_name":"mondo","definition":"A large, or giant, congenital melanocytic nevus (LCMN or GCMN) is a pigmented skin lesion of more than 20 cm - or 40 cm- respectively, projected adult diameter, composed of melanocytes, and presenting with an elevated risk of malignant transformation.","definition_xrefs":["Orphanet:626"],"direct_ancestors":[{"relation_name":"is_a","term_name":"melanocytic nevus","termid":"MONDO:0005073"},{"relation_name":"is_a","term_name":"hereditary skin disorder","termid":"MONDO:0100118"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03453":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"large congenital melanocytic nevus","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["icd11.foundation:618273329","GARD:2469","UMLS:C1842036","NCIT:C3944","NCIT:C4234","NORD:1184","MEDGEN:330752","ICDO:8761/1","ONCOTREE:SKCN","DOID:0111359","OMIM:137550","SCTID:254815002","SCTID:398696001","MedDRA:10072036"],"synonyms":[{"name":"CMNS","type":"related"},{"name":"GMN","type":"exact"},{"name":"GPHN","type":"related"},{"name":"Giant Congenital Melanocytic Nevus","type":"exact"},{"name":"LCMN","type":"exact"},{"name":"bathing trunk nevus","type":"exact"},{"name":"congenital giant pigmented nevus","type":"related"},{"name":"congenital hairy nevus","type":"related"},{"name":"congenital melanocytic nevi","type":"exact"},{"name":"congenital melanocytic nevus","type":"exact"},{"name":"congenital melanocytic nevus of skin","type":"exact"},{"name":"congenital melanocytic nevus of the skin","type":"exact"},{"name":"congenital nevus","type":"related"},{"name":"congenital nevus of skin","type":"exact"},{"name":"congenital nevus of the skin","type":"exact"},{"name":"congenital pigmented melanocytic Nevus","type":"exact"},{"name":"congenital pigmented nevus","type":"exact"},{"name":"congenital pigmented nevus of skin","type":"exact"},{"name":"congenital pigmented nevus of the skin","type":"exact"},{"name":"congenital pigmented skin nevus","type":"exact"},{"name":"congenital skin nevus","type":"exact"},{"name":"giant congenital melanocytic nevus","type":"related"},{"name":"giant congenital nevus","type":"exact"},{"name":"giant congenital pigmented Nevus","type":"related"},{"name":"giant hairy nevus","type":"related"},{"name":"giant pigmented hairy nevus","type":"exact"},{"name":"giant pigmented nevus","type":"related"},{"name":"giant pigmented nevus of skin","type":"exact"},{"name":"giant pigmented nevus of the skin","type":"exact"},{"name":"large congenital melanocytic nevus","type":"exact"},{"name":"melanocytic nevus syndrome, congenital","type":"related"},{"name":"melanocytic nevus syndrome, congenital, somatic","type":"exact"},{"name":"nevus spilus","type":"related"},{"name":"pigmented moles","type":"related"},{"name":"spitz nevus","type":"related"},{"name":"spitz nevus or nevus spilus, somatic","type":"exact"}],"termid":"MONDO:0044792","terms_by_termid":{"MONDO:0044792":null},"xrefs":{"Monarch":{"xref_id":"0044792"}}}


id: PBO:0059683
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO1 pseudogene 49","termid":"PBO:0059683"}


id: MONDO:0009016
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The deposition of calcium on the cornea, resulting in pain and decreased visual acuity.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"corneal degeneration","termid":"MONDO:0001515"},{"relation_name":"is_a","term_name":"keratopathy","termid":"MONDO:0002261"},{"relation_name":"is_a","term_name":"corneal dystrophy","termid":"MONDO:0018102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"band keratopathy","secondary_identifiers":["MEDGEN:56354","OMIM:217500","UMLS:C0155120","ICD9:371.43","DOID:11164","MESH:C562399","SCTID:35055000","icd11.foundation:184627034","NCIT:C118765"],"synonyms":[{"name":"band keratopathy","type":"exact"},{"name":"band-shaped keratopathy","type":"exact"},{"name":"corneal dystrophy, band-SHAPED","type":"related"}],"termid":"MONDO:0009016","xrefs":{"Monarch":{"xref_id":"0009016"}}}


id: FYPO:0001671
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of GDP binding by a gene product (usually a protein) in a mutant is decreased. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal GDP binding","termid":"FYPO:0001670"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000652","FYPO:0001985"],"is_obsolete":false,"name":"decreased GDP binding","synonyms":[{"name":"reduced GDP binding","type":"exact"}],"termid":"FYPO:0001671"}


id: MONDO:0859366
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant nonsyndromic hearing loss","termid":"MONDO:0019587"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019497"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0019497"],"is_obsolete":false,"name":"hearing loss, autosomal dominant 85","secondary_identifiers":["MEDGEN:1824075","UMLS:C5774302","OMIM:620227"],"synonyms":[{"name":"deafness, autosomal dominant 85","type":"narrow"}],"termid":"MONDO:0859366","xrefs":{"Monarch":{"xref_id":"0859366"}}}


id: FYPO:0007145
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of 5' deoxyribonuclease (pyrimidine dimer) activity is normal (i.e. indistinguishable from wild type) during a cellular response to ultraviolet light.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal 5' deoxyribonuclease (pyrimidine dimer) activity","termid":"FYPO:0004027"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000654","FYPO:0000652"],"is_obsolete":false,"name":"normal 5' deoxyribonuclease (pyrimidine dimer) activity during cellular response to UV","synonyms":[{"name":"normal 5' deoxyribonuclease (pyrimidine dimer) activity during cellular response to ultraviolet light","type":"exact"}],"termid":"FYPO:0007145"}


id: PBO:0018037
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hexose transmembrane transporter Ght2","termid":"PBO:0018037"}


id: PBO:0001425
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 snoRNP-associated protein Utp11 (predicted)","termid":"PBO:0001425"}


id: PBO:0062795
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ORMDL sphingolipid biosynthesis regulator 1","termid":"PBO:0062795"}


id: MONDO:0003246
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An uncommon type of hepatocelluar carcinoma, morphologically characterized by significant fibrosis around the sinusoid-like spaces and atrophy of the tumor trabeculae.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hepatocellular carcinoma","termid":"MONDO:0007256"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992","MONDO:0002515"],"is_obsolete":false,"name":"sclerosing hepatic carcinoma","secondary_identifiers":["UMLS:C1266018","MEDGEN:266088","DOID:5026","ICDO:8172/3","NCIT:C27388"],"synonyms":[{"name":"scirrhous hepatocellular cancer","type":"exact"},{"name":"scirrhous hepatocellular carcinoma","type":"exact"},{"name":"sclerosing hepatic carcinoma","type":"exact"},{"name":"sclerosing hepatocellular carcinoma","type":"exact"}],"termid":"MONDO:0003246","xrefs":{"Monarch":{"xref_id":"0003246"}}}


id: MONDO:0003476
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An ependymoma, often supratentorial in location, characterized by the presence of ependymal cells with a perinuclear halo.","definition_xrefs":["NCIT:C4714"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete benign ependymoma (obsolete MONDO:0003161)","termid":"MONDO:0003161"},{"relation_name":"is_a","term_name":"ependymoma","termid":"MONDO:0016698"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"clear cell ependymoma","secondary_identifiers":["DOID:5507","ONCOTREE:CCE","MEDGEN:1852795","UMLS:C5848299"],"synonyms":[{"name":"clear cell ependymoma","type":"exact"}],"termid":"MONDO:0003476","xrefs":{"Monarch":{"xref_id":"0003476"}}}


id: PBO:0040911
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BMS1 pseudogene 15","termid":"PBO:0040911"}


id: PBO:0005802
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"wtf element","termid":"PBO:0005802"}


id: GO:0007575
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process of nucleolar expansion.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete nucleolar size increase (obsolete GO:0007575)","synonyms":[{"name":"nucleolar size increase","type":"exact"}],"termid":"GO:0007575"}


id: PBO:0072263
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S21 pseudogene 1","termid":"PBO:0072263"}


id: SO:0002326
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A splice_donor_variant (SO:0001575) that allows the transcript to escape nonsense-mediated decay (NMD).","definition_xrefs":["GenCC:AR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"splice_donor_variant","termid":"SO:0001575"},{"relation_name":"is_a","term_name":"NMD_escaping_variant","termid":"SO:0002320"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splice_donor_variant_NMD_escaping","synonyms":[{"name":"splice donor variant-NMD escaping","type":"exact"},{"name":"splice donor variant-nonsense-mediated decay escaping","type":"exact"}],"termid":"SO:0002326"}


id: PBO:0054492
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1892","termid":"PBO:0054492"}


id: MONDO:0010311
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Becker muscular dystrophy (BMD) is a neuromuscular disease characterized by progressive muscle wasting and weakness due to degeneration of skeletal, smooth and cardiac muscle.","definition_xrefs":["Orphanet:98895"],"direct_ancestors":[{"relation_name":"is_a","term_name":"muscular dystrophy","termid":"MONDO:0020121"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"Becker muscular dystrophy","secondary_identifiers":["icd11.foundation:690532643","NANDO:2200865","NCIT:C84587","MESH:C570377","GARD:5900","MedDRA:10059117","UMLS:C0917713","DOID:9883","NANDO:1200489","OMIM:300376","MEDGEN:182959","SCTID:387732009"],"synonyms":[{"name":"BMD","type":"exact"},{"name":"Becker dystrophinopathy","type":"exact"},{"name":"Becker muscular dystrophy","type":"exact"},{"name":"Becker muscular dystrophy, X-linked recessive","type":"exact"},{"name":"Becker's muscular dystrophy","type":"related"},{"name":"benign congenital myopathy","type":"exact"},{"name":"benign pseudohypertrophic muscular dystrophy","type":"exact"},{"name":"muscular dystrophy pseudohypertrophic progressive, Becker type","type":"related"},{"name":"muscular dystrophy, Becker type","type":"related"},{"name":"muscular dystrophy, pseudohypertrophic progressive, Becker type","type":"related"}],"termid":"MONDO:0010311","xrefs":{"Monarch":{"xref_id":"0010311"}}}


id: GO:0042353
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of fucose (6-deoxygalactose).","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fucose metabolic process","termid":"GO:0006004"},{"relation_name":"is_a","term_name":"hexose biosynthetic process","termid":"GO:0019319"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"fucose biosynthetic process","synonyms":[{"name":"fucose anabolism","type":"exact"},{"name":"fucose biosynthesis","type":"exact"},{"name":"fucose formation","type":"exact"},{"name":"fucose synthesis","type":"exact"}],"termid":"GO:0042353"}


id: MONDO:0011928
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Caudal duplication (CD) is a rare developmental anomaly in which structures derived from the embryonic cloaca and notochord are duplicated to varying extents.","definition_xrefs":["Orphanet:1756"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"digestive system disorder","termid":"MONDO:0004335"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"caudal duplication","secondary_identifiers":["MEDGEN:335822","MESH:C564315","GARD:1164","OMIM:607864","SCTID:71464000","UMLS:C1842884","icd11.foundation:1949559803"],"synonyms":[{"name":"caudal DUPLICATION anomaly","type":"related"},{"name":"dipygus","type":"exact"},{"name":"split notochord syndrome","type":"exact"}],"termid":"MONDO:0011928","xrefs":{"Monarch":{"xref_id":"0011928"}}}


id: GO:0047975
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: guanosine + phosphate = guanine + D-ribose 1-phosphate.","definition_xrefs":["EC:2.4.2.15"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentosyltransferase activity","termid":"GO:0016763"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0016757","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"guanosine phosphorylase activity","secondary_identifiers":["MetaCyc:RXN0-5199","RHEA:13233"],"synonyms":[{"name":"guanosine:phosphate D-ribosyltransferase activity","type":"related"},{"name":"guanosine:phosphate alpha-D-ribosyltransferase activity","type":"related"}],"termid":"GO:0047975"}


id: POMBASE_GENE_EX_REL:in_presence_of
data:
  {"annotation_feature_type":"gene","cv_name":"go/extensions/gorel","definition":"a substance is present","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"in_presence_of","termid":"POMBASE_GENE_EX_REL:in_presence_of"}


id: PBO:0064807
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 1 regulatory inhibitor subunit 1C","termid":"PBO:0064807"}


id: GO:0002777
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of an antimicrobial peptide. Such peptides may have protective properties against bacteria, fungi, viruses, or protozoa.","definition_xrefs":["PMID:15638771","PMID:11807545","GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide biosynthetic process","termid":"GO:0043043"},{"relation_name":"part_of","term_name":"antimicrobial peptide production","termid":"GO:0002775"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"antimicrobial peptide biosynthetic process","termid":"GO:0002777"}


id: GO:0014743
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of muscle hypertrophy.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of muscle system process","termid":"GO:0090257"},{"relation_name":"regulates","term_name":"muscle hypertrophy","termid":"GO:0014896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of muscle hypertrophy","termid":"GO:0014743"}


id: PBO:0045291
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynamin 1 pseudogene 43","termid":"PBO:0045291"}


id: PBO:0041152
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"basic transcription factor 3 pseudogene 7","termid":"PBO:0041152"}


id: PBO:0057246
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 449c","termid":"PBO:0057246"}


id: MONDO:0006195
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign nodular lesion protruding above the surface of the endometrium. It is composed of a fibrous stroma that contains thick-walled blood vessels and dilated endometrial glands. Polypectomy is the treatment of choice. Only few cases with recurrence have been reported.","definition_xrefs":["NCIT:C6433"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endometrial disorder","termid":"MONDO:0000931"},{"relation_name":"is_a","term_name":"uterine polyp","termid":"MONDO:0004701"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endometrial polyp","secondary_identifiers":["MEDGEN:312370","EFO:1000237","UMLS:C1704273"],"synonyms":[{"name":"endometrial polyp","type":"exact"},{"name":"endometrial stromal polyp","type":"exact"},{"name":"endometrium polyp","type":"exact"},{"name":"polyp of endometrium","type":"exact"},{"name":"polyp of the endometrium","type":"exact"},{"name":"polyp, endometrial stromal, benign","type":"exact"}],"termid":"MONDO:0006195","xrefs":{"Monarch":{"xref_id":"0006195"}}}


id: GO:0141196
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A transposable element silencing mechanism mediated by Piwi-associated RNA (piRNA)-directed DNA methylation. This results in a heterochromatin assembly, a chromatin conformation that is refractory to transcription.","definition_xrefs":["PMID:32674113"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transposable element silencing by heterochromatin formation","termid":"GO:0141005"},{"relation_name":"is_a","term_name":"gene silencing by piRNA-directed DNA methylation","termid":"GO:0141176"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006325"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0006325"],"is_obsolete":false,"name":"transposable element silencing by piRNA-mediated DNA methylation","synonyms":[{"name":"retrotransposon silencing by piRNA-directed DNA methylation","type":"narrow"},{"name":"transposable element silencing by piRNA-directed DNA methylation","type":"exact"}],"termid":"GO:0141196"}


id: PBO:0084748
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial malate dehydrogenase; catalyzes interconversion of malate and oxaloacetate; involved in the tricarboxylic acid (TCA) cycle; phosphorylated; mutation in human homolog MDH2 causes early-onset severe encephalopathy","termid":"PBO:0084748"}


id: MONDO:0800043
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare autosomal recessive congenital primary skeletal dysplasia, characterized by small stature, bowing of the long bones, camptodactyly, hyperthermic episodes, respiratory distress/apneic episodes and feeding difficulties that usually lead to early mortality.","definition_xrefs":["Orphanet:3206"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schwartz-Jampel syndrome","termid":"MONDO:0009717"},{"relation_name":"is_a","term_name":"bent bone dysplasia","termid":"MONDO:0019698"},{"relation_name":"is_a","term_name":"Stuve-Wiedemann syndrome","termid":"MONDO:0031280"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005497"],"is_obsolete":false,"name":"Stüve-Wiedemann syndrome 1","secondary_identifiers":["MEDGEN:1803541","SCTID:254097005","UMLS:C5676888","MESH:C537502","OMIM:601559","GARD:5045"],"synonyms":[{"name":"SJS2","type":"exact"},{"name":"STUVE-Wiedemann syndrome","type":"broad"},{"name":"STWS","type":"exact"},{"name":"SWS","type":"broad"},{"name":"Schwartz-Jampel syndrome neonatal","type":"exact"},{"name":"Schwartz-Jampel syndrome type 2","type":"exact"},{"name":"Schwartz-Jampel syndrome, neonatal","type":"exact"},{"name":"Schwartz-Jampel syndrome, type 2","type":"related"},{"name":"Stuve-Wiedemann syndrome","type":"broad"},{"name":"Stuve-Wiedemann syndrome/Schwartz-Jampel type 2 syndrome","type":"exact"},{"name":"Stuve-Wiedemann/Schwartz-Jampel type 2 syndrome","type":"related"},{"name":"Stws","type":"broad"},{"name":"Stüve-Wiedemann dysplasia","type":"exact"},{"name":"Stüve-Wiedemann syndrome","type":"broad"},{"name":"Stüve-Wiedemann/Schwartz-Jampel type 2 syndrome","type":"exact"},{"name":"neonatal Schwartz-Jampel syndrome","type":"exact"},{"name":"neonatal Schwartz-Jampel syndrome type 2","type":"related"}],"termid":"MONDO:0800043","xrefs":{"Monarch":{"xref_id":"0800043"}}}


id: GO:0050743
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of a protein-FMN linkage via 1'-(8alpha-FMN)-L-histidine.","definition_xrefs":["PMID:8611516","RESID:AA0352"],"gene_count":0,"genotype_count":0,"name":"obsolete protein-FMN linkage via 1'-(8alpha-FMN)-L-histidine (obsolete GO:0050743)","termid":"GO:0050743"}


id: MONDO:0014929
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any retinitis pigmentosa in which the cause of the disease is a mutation in the POMGNT1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinitis pigmentosa","termid":"MONDO:0019200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0004736","MONDO:0005066","MONDO:0005328"],"is_obsolete":false,"name":"retinitis pigmentosa 76","secondary_identifiers":["UMLS:C4310704","MEDGEN:934671","GARD:16196","OMIM:617123"],"synonyms":[{"name":"POMGNT1 retinitis pigmentosa","type":"exact"},{"name":"RP76","type":"exact"},{"name":"retinitis pigmentosa 76","type":"exact"},{"name":"retinitis pigmentosa 76; RP76","type":"exact"},{"name":"retinitis pigmentosa caused by mutation in POMGNT1","type":"exact"},{"name":"retinitis pigmentosa type 76","type":"exact"}],"termid":"MONDO:0014929","xrefs":{"Monarch":{"xref_id":"0014929"}}}


id: PATO:0001302
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color consisting of red and orange hue with a slight amount of gray.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"color","termid":"PATO:0000014"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vermilion","termid":"PATO:0001302"}


id: PBO:0044562
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deleted in azoospermia 3","termid":"PBO:0044562"}


id: GO:1905812
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of motor neuron axon guidance.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:18434533"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of axon guidance","termid":"GO:1902667"},{"relation_name":"regulates","term_name":"motor neuron axon guidance","termid":"GO:0008045"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of motor neuron axon guidance","synonyms":[{"name":"regulation of motoneuron axon guidance","type":"exact"},{"name":"regulation of motor axon guidance","type":"exact"},{"name":"regulation of motor axon pathfinding","type":"exact"}],"termid":"GO:1905812"}


id: PR:Q10446
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A glucose-induced degradation protein 8 homolog that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01905","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C12B10.13 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC12B10.13","secondary_identifiers":["UniProtKB:Q10446"],"synonyms":[{"name":"Spom972h-GID8","type":"exact"}],"termid":"PR:Q10446"}


id: PBO:0076631
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TBL1X/Y related 1","termid":"PBO:0076631"}


id: PBO:0088493
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"membrane trafficking protein, ER to Golgi Psg1","termid":"PBO:0088493"}


id: GO:0019589
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The anaerobic chemical reactions and pathways resulting in the breakdown of glycerol into propane-1,3-diol and water.","definition_xrefs":["MetaCyc:GOLPDLCAT-PWY","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anaerobic glycerol catabolic process","termid":"GO:0019588"},{"relation_name":"is_a","term_name":"propanediol metabolic process","termid":"GO:0051143"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006091","GO:0005975"],"is_obsolete":false,"name":"anaerobic glycerol catabolic process to propane-1,3-diol","synonyms":[{"name":"glycerol fermentation to 1,3-propanediol","type":"exact"},{"name":"glycerol fermentation to propane-1,3-diol","type":"exact"}],"termid":"GO:0019589"}


id: PBO:0044417
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 2 subfamily U member 1","termid":"PBO:0044417"}


id: PBO:0050091
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 1","termid":"PBO:0050091"}


id: GO:0099071
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A microtubule bundle that undergoes changes in length, and in which microtubule sliding takes place.","definition_xrefs":["PMID:26124291","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule bundle","termid":"GO:0097427"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"dynamic microtubule bundle","termid":"GO:0099071"}


id: PBO:0051310
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 1/OR2-2 (pseudogene)","termid":"PBO:0051310"}


id: PBO:0080580
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WDR5 divergent transcript","termid":"PBO:0080580"}


id: GO:1990267
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a transition metal nanoparticle.","definition_xrefs":["PMID:23150627"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to chemical","termid":"GO:0042221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to transition metal nanoparticle","synonyms":[{"name":"response to colloidal metal","type":"related"},{"name":"response to neutral metal atoms","type":"related"}],"termid":"GO:1990267"}


id: FYPO:0003848
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to hydrazinocurcumin. Cells stop growing (and may die) at a concentration of hydrazinocurcumin that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0002683","FYPO:0000003","FYPO:0000139","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"sensitive to hydrazinocurcumin","synonyms":[{"name":"hypersensitive to hydrazinocurcumin","type":"exact"},{"name":"sensitive to hydrazinocurcumin during mitotic cell cycle","type":"related"},{"name":"sensitive to hydrazinocurcumin during vegetative growth","type":"exact"}],"termid":"FYPO:0003848"}


id: GO:0061565
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of introducing a phosphate group into dAMP, deoxyadenosine monophosphate, to produce dADP. Addition of two phosphate groups produces dATP.","definition_xrefs":["GOC:dph","PMID:23416111"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside monophosphate phosphorylation","termid":"GO:0046940"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"dAMP phosphorylation","termid":"GO:0061565"}


id: PBO:0083492
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified gene YDR456W","termid":"PBO:0083492"}


id: PBO:0082880
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cullin subunit of a Roc1p-dependent E3 ubiquitin ligase complex; role in anaphase progression; Rtt101p-Mms22p ligase associates with replisome complex during S phase via Ctf4p; required for recovery after DSB repair; implicated in Mms22-dependent DNA repair; involved with Mms1p in nonfunctional rRNA decay; modified by the ubiquitin-like protein, Rub1p","termid":"PBO:0082880"}


id: GO:0038088
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by vascular endothelial growth factor (VEGF) binding to a beta-type platelet-derived growth factor receptor (PDGFR) on the surface of a cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:signaling","PMID:17470632"],"direct_ancestors":[{"relation_name":"is_a","term_name":"platelet-derived growth factor receptor-beta signaling pathway","termid":"GO:0035791"},{"relation_name":"is_a","term_name":"VEGF-activated platelet-derived growth factor receptor signaling pathway","termid":"GO:0038086"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"VEGF-activated platelet-derived growth factor receptor-beta signaling pathway","synonyms":[{"name":"VEGF-A/PDGFRbeta signaling","type":"narrow"},{"name":"VEGF-activated PDGFRbeta signalling pathway","type":"exact"},{"name":"VEGF-activated platelet-derived growth factor receptor-beta signalling pathway","type":"exact"},{"name":"VEGF/PDGFRbeta signaling pathway","type":"exact"},{"name":"vascular endothelial growth factor-activated platelet-derived growth factor receptor-beta signaling pathway","type":"exact"}],"termid":"GO:0038088"}


id: GO:0018719
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 6-aminohexanoate + alpha-ketoglutarate = glutamate + 6-oxohexanoate.","definition_xrefs":["UM-BBD_reactionID:r0449"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016769","GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"6-aminohexanoate transaminase activity","secondary_identifiers":["MetaCyc:R562-RXN"],"termid":"GO:0018719"}


id: MONDO:0700138
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A myxoma that occurs in the rectum of a cow.","definition_xrefs":["NCIT:C134768"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bovine neoplasm","termid":"MONDO:0700134"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bovine rectal myxoma","termid":"MONDO:0700138","xrefs":{"Monarch":{"xref_id":"0700138"}}}


id: MONDO:0009486
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autosomal recessive form of Kenny-Caffey syndrome due to mutation(s) in the TBCE gene, encoding tubulin-specific chaperone E. This condition is characterized by hypoparathyroidism with hypocalcemia, marked growth retardation, craniofacial anomalies, absent diploic space in the skull, cortical thickening of long bones with medullary stenosis, and small hands and feet.","definition_xrefs":["NCIT:C130992"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"Kenny-Caffey syndrome","termid":"MONDO:0016516"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"autosomal recessive Kenny-Caffey syndrome","secondary_identifiers":["Orphanet:93324","UMLS:C1855648","OMIM:244460","GARD:8367","DOID:0080722","MESH:C537021","MEDGEN:340923"],"synonyms":[{"name":"KCS1","type":"related"},{"name":"Kcs","type":"related"},{"name":"Kenny-Caffey syndrome type 1","type":"exact"},{"name":"Kenny-Caffey syndrome, autosomal recessive","type":"exact"},{"name":"Kenny-Caffey syndrome, type 1","type":"related"}],"termid":"MONDO:0009486","xrefs":{"Monarch":{"xref_id":"0009486"}}}


id: PBO:0036478
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein phosphatase, PP4 complex subunit Ppe2","termid":"PBO:0036478"}


id: GO:2000142
data:
  {"annotated_genes":["SJAG_00909","SJAG_02391","SJAG_04705","SJAG_03622","SJAG_04647","SJAG_01952","SJAG_04099","SJAG_00297","SJAG_00342","SJAG_02849","SJAG_02551","SJAG_04820","SJAG_03573","SJAG_01403","SJAG_05203","SJAG_00766","SJAG_02494","SJAG_03590","SJAG_01771","SJAG_00904","SJAG_05341","SJAG_00150","SJAG_03421"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90072,79940],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045899"},{"annotations":[99384,106610,109100,94702,96224,103780,90728,106420,104038,106745,115680,109127,115115,99033,119317,95744,91042,94813,87810,106065,102317],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060261"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of DNA-templated transcription initiation.","definition_xrefs":["GOC:txnOH","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of DNA-templated transcription","termid":"GO:0006355"},{"relation_name":"regulates","term_name":"DNA-templated transcription initiation","termid":"GO:0006352"}],"gene_count":23,"genes_by_uniquename":{"SJAG_00150":null,"SJAG_00297":null,"SJAG_00342":null,"SJAG_00766":null,"SJAG_00904":null,"SJAG_00909":null,"SJAG_01403":null,"SJAG_01771":null,"SJAG_01952":null,"SJAG_02391":null,"SJAG_02494":null,"SJAG_02551":null,"SJAG_02849":null,"SJAG_03421":null,"SJAG_03573":null,"SJAG_03590":null,"SJAG_03622":null,"SJAG_04099":null,"SJAG_04647":null,"SJAG_04705":null,"SJAG_04820":null,"SJAG_05203":null,"SJAG_05341":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006351"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0006355","GO:0006351"],"is_obsolete":false,"name":"regulation of DNA-templated transcription initiation","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"regulation of DNA-dependent transcription, initiation","type":"exact"},{"name":"regulation of DNA-templated transcription, initiation","type":"exact"},{"name":"regulation of initiation of DNA-dependent transcription","type":"exact"},{"name":"regulation of transcription initiation, DNA-dependent","type":"exact"}],"termid":"GO:2000142","terms_by_termid":{"GO:0045899":null,"GO:0060261":null}}


id: PBO:0088074
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ubiquitin-specific protease involved in protein deubiquitination; forms a complex with AAA peroxins Pex1p and Pex6p; deubiquitinates mono- and polyubiquitinated forms of Pex5p; deubiquitinates Clb5p, counteracting APC activity, and facilitating both Clb5p accumulation and S phase entry; physically interacts with anaphase-promoting complex/cyclosome (APC/C) activator, Cdh1p; catalytic activity regulated by an N-terminal TRAF-like domain and and C-terminal sequences","termid":"PBO:0088074"}


id: SO:0000004
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A coding exon that is not the most 3-prime or the most 5-prime in a given transcript.","direct_ancestors":[{"relation_name":"is_a","term_name":"coding_exon","termid":"SO:0000195"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interior_coding_exon","synonyms":[{"name":"interior coding exon","type":"exact"}],"termid":"SO:0000004"}


id: GO:0050115
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: myosin light-chain phosphate + H2O = myosin light chain + phosphate.","definition_xrefs":["EC:3.1.3.53","MetaCyc:MYOSIN-LIGHT-CHAIN-PHOSPHATASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphoprotein phosphatase activity","termid":"GO:0004721"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0004721"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0140096","GO:0016787","GO:0003824","GO:0016788","GO:0004721"],"is_obsolete":false,"name":"myosin-light-chain-phosphatase activity","secondary_identifiers":["Reactome:R-HSA-419232"],"synonyms":[{"name":"[Myosin light-chain]-phosphatase activity","type":"exact"},{"name":"myosin light chain kinase phosphatase activity","type":"related"},{"name":"myosin light-chain kinase phosphatase activity","type":"related"},{"name":"myosin-light-chain phosphatase activity","type":"related"},{"name":"myosin-light-chain-phosphate phosphohydrolase activity","type":"related"},{"name":"protein phosphatase 2A","type":"related"}],"termid":"GO:0050115"}


id: GO:1902755
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving sulfurated eukaryotic molybdenum cofactor(2-).","definition_xrefs":["GO_REF:0000068","GOC:dph","GOC:TermGenie","PMID:18258600"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphorus metabolic process","termid":"GO:0006793"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sulfurated eukaryotic molybdenum cofactor(2-) metabolic process","synonyms":[{"name":"sulfurated eukaryotic molybdenum cofactor(2-) metabolism","type":"exact"}],"termid":"GO:1902755"}


id: PBO:0040862
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"basic leucine zipper nuclear factor 1","termid":"PBO:0040862"}


id: PBO:0082247
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alpha subunit of the capping protein heterodimer (Cap1p and Cap2p); capping protein (CP) binds to the barbed ends of actin filaments preventing further polymerization; localized predominantly to cortical actin patches; protein increases in abundance and relocalizes from bud neck to plasma membrane upon DNA replication stress","termid":"PBO:0082247"}


id: MOD:01325
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Other -","definition_xrefs":["Unimod:254#K","PubMed:7744761"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetaldehyde +26","termid":"MOD:00577"},{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acetaldehyde +26 - site K","synonyms":[{"name":"Acetaldehyde +26","type":"related"},{"name":"Delta:H(2)C(2)","type":"related"}],"termid":"MOD:01325"}


id: PBO:0042867
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CFAP97 domain containing 2","termid":"PBO:0042867"}


id: PBO:0027792
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_phosphatase_activity","termid":"PBO:0027792"}


id: PBO:0005563
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-1,2-mannosyltransferase Omh3 (predicted)","termid":"PBO:0005563"}


id: PR:G2TRT1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC1348.12 gene.","definition_xrefs":["UniProtKB:G2TRT1","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptional repressor C1348.12 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1348.12","synonyms":[{"name":"Spom972h-SPBC1348.12","type":"exact"}],"termid":"PR:G2TRT1"}


id: GO:0005834
data:
  {"annotated_genes":["SJAG_03081","SJAG_02444","SJAG_04026","SJAG_02233"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[74661,75681,80740,106867],"is_not":false,"summary":null,"term":"GO:0005834"}]},"cv_name":"cellular_component","definition":"Any of a family of heterotrimeric GTP-binding and hydrolyzing proteins; they belong to a superfamily of GTPases that includes monomeric proteins such as EF-Tu and RAS. Heterotrimeric G-proteins consist of three subunits; the alpha subunit contains the guanine nucleotide binding site and possesses GTPase activity; the beta and gamma subunits are tightly associated and function as a beta-gamma heterodimer; extrinsic plasma membrane proteins (cytoplasmic face) that function as a complex to transduce signals from G protein-coupled receptors to an effector protein.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"},{"relation_name":"is_a","term_name":"GTPase complex","termid":"GO:1905360"},{"relation_name":"part_of","term_name":"extrinsic component of cytoplasmic side of plasma membrane","termid":"GO:0031234"}],"gene_count":4,"genes_by_uniquename":{"SJAG_02233":null,"SJAG_02444":null,"SJAG_03081":null,"SJAG_04026":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005886"],"is_obsolete":false,"name":"heterotrimeric G-protein complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"heterotrimeric G-protein GTPase activity","type":"related"},{"name":"heterotrimeric G-protein GTPase, alpha-subunit","type":"narrow"},{"name":"heterotrimeric G-protein GTPase, beta-subunit","type":"narrow"},{"name":"heterotrimeric G-protein GTPase, gamma-subunit","type":"narrow"}],"termid":"GO:0005834","terms_by_termid":{"GO:0005834":null}}


id: MONDO:0014086
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any osteogenesis imperfecta in which the cause of the disease is a mutation in the WNT1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"osteogenesis imperfecta and a reduction of bone mineral density.","termid":"MONDO:0800064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"osteogenesis imperfecta type 15","secondary_identifiers":["GARD:15919","DOID:0110347","MEDGEN:815174","UMLS:C3808844","OMIM:615220"],"synonyms":[{"name":"OI, type 15","type":"related"},{"name":"OI15","type":"exact"},{"name":"WNT1 osteogenesis imperfecta","type":"exact"},{"name":"osteogenesis imperfecta caused by mutation in WNT1","type":"exact"},{"name":"osteogenesis imperfecta type XV","type":"exact"},{"name":"osteogenesis imperfecta, type 15","type":"related"},{"name":"osteogenesis imperfecta, type XV","type":"related"}],"termid":"MONDO:0014086","xrefs":{"Monarch":{"xref_id":"0014086"}}}


id: GO:0008493
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of tetracycline from one side of a membrane to the other. Tetracycline is a broad spectrum antibiotic that blocks binding of aminoacyl tRNA to the ribosomes of both Gram-positive and Gram-negative organisms (and those of organelles).","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic anion transmembrane transporter activity","termid":"GO:0008514"},{"relation_name":"is_a","term_name":"alcohol transmembrane transporter activity","termid":"GO:0015665"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"tetracycline transmembrane transporter activity","synonyms":[{"name":"tetracyclin transporter activity","type":"exact"},{"name":"tetracycline transporter activity","type":"related"}],"termid":"GO:0008493"}


id: PBO:0049602
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H3 histone pseudogene 5","termid":"PBO:0049602"}


id: GO:0048672
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of collateral sprouting.","definition_xrefs":["GOC:jid","GOC:dgh","GOC:dph","GOC:lm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell growth","termid":"GO:0030307"},{"relation_name":"is_a","term_name":"positive regulation of developmental growth","termid":"GO:0048639"},{"relation_name":"is_a","term_name":"regulation of collateral sprouting","termid":"GO:0048670"},{"relation_name":"is_a","term_name":"positive regulation of axonogenesis","termid":"GO:0050772"},{"relation_name":"positively_regulates","term_name":"collateral sprouting","termid":"GO:0048668"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of collateral sprouting","synonyms":[{"name":"activation of collateral sprouting","type":"narrow"},{"name":"stimulation of collateral sprouting","type":"narrow"},{"name":"up regulation of collateral sprouting","type":"exact"},{"name":"up-regulation of collateral sprouting","type":"exact"},{"name":"upregulation of collateral sprouting","type":"exact"}],"termid":"GO:0048672"}


id: GO:0007275
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The biological process whose specific outcome is the progression of a multicellular organism over time from an initial condition (e.g. a zygote or a young adult) to a later condition (e.g. a multicellular animal or an aged adult).","definition_xrefs":["GOC:dph","GOC:ems","GOC:isa_complete","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal process","termid":"GO:0032501"},{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"multicellular organism development","termid":"GO:0007275"}


id: PBO:0034193
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-ubiquitously_expressed_in","termid":"PBO:0034193"}


id: PBO:0039928
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho guanine nucleotide exchange factor 33","termid":"PBO:0039928"}


id: GO:0120210
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Rod telodendria are projections that originate from the rod pedicle and form gap junctions with other photoreceptors within the outer plexiform layer of the retina.","definition_xrefs":["GOC:cvs","GOC:krc","PMID:14755521"],"direct_ancestors":[{"relation_name":"is_a","term_name":"telodendria","termid":"GO:0120208"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"rod telodendria","termid":"GO:0120210"}


id: PBO:0050541
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypoxanthine phosphoribosyltransferase 1 pseudogene 2","termid":"PBO:0050541"}


id: PBO:0001861
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.4.17.4","termid":"PBO:0001861"}


id: PBO:0085696
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in resistance to nitrosoguanidine and 6-azauracil; expression is regulated by transcription factors involved in multidrug resistance; SNG1 has a paralog, YJR015W, that arose from the whole genome duplication","termid":"PBO:0085696"}


id: MONDO:0800038
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any MELAS syndromein which the cause of the disease is a mutation in the MTND1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"MELAS syndrome","termid":"MONDO:0010789"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0004069","MONDO:0005066","MONDO:0005336"],"is_obsolete":false,"name":"MELAS syndrome caused by mutation in MTND1","synonyms":[{"name":"MTND1 MELAS syndrome","type":"exact"}],"termid":"MONDO:0800038","xrefs":{"Monarch":{"xref_id":"0800038"}}}


id: MONDO:0013147
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any familial isolated dilated cardiomyopathy in which the cause of the disease is a mutation in the NEXN gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial isolated dilated cardiomyopathy","termid":"MONDO:0700335"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"dilated cardiomyopathy 1CC","secondary_identifiers":["OMIM:613122","GARD:15621","MEDGEN:413929","UMLS:C2751084","MESH:C567733","DOID:0110424"],"synonyms":[{"name":"CMD1CC","type":"exact"},{"name":"NEXN familial isolated dilated cardiomyopathy","type":"exact"},{"name":"cardiomyopathy, dilated, 1CC","type":"related"},{"name":"cardiomyopathy, dilated, type 1Cc","type":"exact"},{"name":"dilated cardiomyopathy type 1CC","type":"exact"},{"name":"familial isolated dilated cardiomyopathy caused by mutation in NEXN","type":"exact"}],"termid":"MONDO:0013147","xrefs":{"Monarch":{"xref_id":"0013147"}}}


id: MONDO:0020759
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"childhood absence epilepsy","termid":"MONDO:0010826"},{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epilepsy, childhood absence, susceptibility to, 1","secondary_identifiers":["MEDGEN:325057","OMIM:600131","UMLS:C1838604"],"synonyms":[{"name":"ECA1","type":"exact"},{"name":"epilepsy, childhood absence, 1","type":"exact"},{"name":"epilepsy, childhood absence, susceptibility to, 1","type":"exact"}],"termid":"MONDO:0020759","xrefs":{"Monarch":{"xref_id":"0020759"}}}


id: MONDO:0859256
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with language delay and seizures","secondary_identifiers":["DOID:0070444","OMIM:619908","MEDGEN:1805816","UMLS:C5676998"],"termid":"MONDO:0859256","xrefs":{"Monarch":{"xref_id":"0859256"}}}


id: FYPO:0007813
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing stavudine.","definition_xrefs":["PMID:34108240","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0000257","FYPO:0000003","FYPO:0002058","FYPO:0002057","FYPO:0002060"],"is_obsolete":false,"name":"normal growth on stavudine","synonyms":[{"name":"normal cell population growth in presence of stavudine","type":"exact"},{"name":"normal cell population growth on stavudine","type":"exact"},{"name":"normal vegetative cell population growth on stavudine","type":"exact"}],"termid":"FYPO:0007813"}


id: PBO:0088212
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase","termid":"PBO:0088212"}


id: MONDO:0060490
data:
  {"annotated_genes":["SJAG_03964"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87083],"is_not":false,"summary":null,"term":"MONDO:0060490"}]},"cv_name":"mondo","definition":"A rare genetic syndromic intellectual disability characterized by infantile onset of global developmental delay and profound intellectual disability in association with a heterogeneous spectrum of manifestations, such as features of lower motor neuron disease, hypotonia, spasticity, contractures, seizures, respiratory insufficiency, and optic atrophy, among others. Dysmorphic craniofacial features include microcephaly, tall forehead, bitemporal narrowing, flat nasal bridge, low-set ears, and high-arched palate. Brain imaging may show cerebral and cerebellar atrophy, delayed myelination, and thin corpus callosum.","definition_xrefs":["Orphanet:544469"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03964":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with microcephaly, hypotonia, and variable brain anomalies","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:17985","MEDGEN:1380860","OMIM:617481","UMLS:C4479566"],"synonyms":[{"name":"NMIHBA","type":"related"},{"name":"neurodevelopmental disorder with microcephaly, hypotonia, and variable brain anomalies","type":"exact"}],"termid":"MONDO:0060490","terms_by_termid":{"MONDO:0060490":null},"xrefs":{"Monarch":{"xref_id":"0060490"}}}


id: PBO:0005447
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sty1 Regulated Kinase","termid":"PBO:0005447"}


id: PBO:0080236
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vitelline membrane outer layer 1 homolog","termid":"PBO:0080236"}


id: PR:Q9P7S3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ssr3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P7S3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SWI/SNF and RSC complexes subunit ssr3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23G3.10c","synonyms":[{"name":"Spom972h-ssr3","type":"exact"}],"termid":"PR:Q9P7S3"}


id: PR:Q9P4X2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- omh6 gene.","definition_xrefs":["UniProtKB:Q9P4X2","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-glycoside alpha-1,2-mannosyltransferase homolog 6 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC959.04c","synonyms":[{"name":"Spom972h-omh6","type":"exact"}],"termid":"PR:Q9P4X2"}


id: GO:1901702
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of salt from one side of a membrane to the other.","definition_xrefs":["GOC:pr","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transporter activity","termid":"GO:0022857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"salt transmembrane transporter activity","termid":"GO:1901702"}


id: MONDO:0002110
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign, testicular or ovarian tumor, derived from adrenal embryonic rest cells. It is composed of hyperplastic adrenal cortical tissue, and it is associated with congenital adrenal hyperplasia.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"benign endocrine neoplasm","termid":"MONDO:0000627"},{"relation_name":"is_a","term_name":"benign reproductive system neoplasm","termid":"MONDO:0000383"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adrenal rest tumor","secondary_identifiers":["ICDO:8671/0","MEDGEN:7902","DOID:1786","MESH:D000314","NCIT:C2860","UMLS:C0001630"],"synonyms":[{"name":"adrenal rest neoplasm","type":"exact"},{"name":"adrenal rest tumor","type":"exact"}],"termid":"MONDO:0002110","xrefs":{"Monarch":{"xref_id":"0002110"}}}


id: PR:Q92350
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pcd1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q92350"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nudix hydrolase C6G9.05 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6G9.05","synonyms":[{"name":"Spom972h-pcd1","type":"exact"}],"termid":"PR:Q92350"}


id: PBO:0056985
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 30d","termid":"PBO:0056985"}


id: MONDO:0001152
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Systematic and extensive loss of memory caused by organic or psychological factors. The loss may be temporary or permanent, and may involve old or recent memories.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cognitive disorder","termid":"MONDO:0002039"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002039"}],"interesting_parent_ids":["MONDO:0002039"],"is_obsolete":false,"name":"amnestic disorder","secondary_identifiers":["MEDGEN:1882","UMLS:C0002625","DOID:10914","ICD9:294.0","icd11.foundation:386330688","SCTID:3298001"],"synonyms":[{"name":"Korsakoff's psychosis or syndrome","type":"exact"},{"name":"amnesia","type":"exact"},{"name":"amnesic syndrome","type":"related"},{"name":"amnestic syndrome","type":"exact"}],"termid":"MONDO:0001152","xrefs":{"Monarch":{"xref_id":"0001152"}}}


id: PBO:0076225
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPT6 homolog, histone chaperone and transcription elongation factor","termid":"PBO:0076225"}


id: MONDO:0008148
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Osteogenesis imperfecta type IV is a moderate type of osteogenesis imperfecta (OI), a genetic disorder characterized by increased bone fragility, low bone mass and susceptibility to bone fractures. Patients with type IV have moderately short stature, mild to moderate scoliosis, grayish or white sclera, and dentinogenesis imperfecta (DI).","definition_xrefs":["Orphanet:216820"],"direct_ancestors":[{"relation_name":"is_a","term_name":"osteogenesis imperfecta and a reduction of bone mineral density.","termid":"MONDO:0800064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"osteogenesis imperfecta type 4","secondary_identifiers":["icd11.foundation:829297901","GARD:8696","SCTID:205497004","MEDGEN:78665","MESH:C536045","DOID:0110340","NCIT:C98576","OMIM:166220","UMLS:C0268363"],"synonyms":[{"name":"OI type 4","type":"exact"},{"name":"OI type IV","type":"related"},{"name":"OI, type 4","type":"related"},{"name":"OI4","type":"exact"},{"name":"common variable OI with normal sclerae","type":"related"},{"name":"osteogenesis imperfecta type IV","type":"exact"},{"name":"osteogenesis imperfecta with normal sclera","type":"exact"},{"name":"osteogenesis imperfecta with normal sclerae","type":"related"},{"name":"osteogenesis imperfecta, type 4","type":"related"},{"name":"osteogenesis imperfecta, type IV","type":"related"}],"termid":"MONDO:0008148","xrefs":{"Monarch":{"xref_id":"0008148"}}}


id: PBO:0002915
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein-tyrosine phosphatase Pyp3","termid":"PBO:0002915"}


id: PBO:0046606
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group K9, member 8","termid":"PBO:0046606"}


id: PR:O59819
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC794.10 gene.","definition_xrefs":["UniProtKB:O59819","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UTP--glucose-1-phosphate uridylyltransferase-like protein Ugp1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC794.10","synonyms":[{"name":"Spom972h-SPCC794.10","type":"exact"},{"name":"UDP-glucose pyrophosphorylase (Schizosaccharomyces pombe 972h-)","type":"broad"},{"name":"UDPGP (Schizosaccharomyces pombe 972h-)","type":"broad"},{"name":"UGPase (Schizosaccharomyces pombe 972h-)","type":"broad"}],"termid":"PR:O59819"}


id: SO:0000983
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The attribute of how many strands are present in a nucleotide polymer.","direct_ancestors":[{"relation_name":"is_a","term_name":"feature_attribute","termid":"SO:0000733"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"strand_attribute","synonyms":[{"name":"strand attribute","type":"exact"}],"termid":"SO:0000983"}


id: PBO:0044349
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CYCS pseudogene 34","termid":"PBO:0044349"}


id: MOD:01542
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom of a residue with the Applied Biosystems iTRAQ8plex-115 reporter+balance group.","definition_xrefs":["Unimod:731"],"direct_ancestors":[{"relation_name":"is_a","term_name":"(13)C isotope tagged reagent","termid":"MOD:01428"},{"relation_name":"is_a","term_name":"(15)N isotope tagged reagent","termid":"MOD:01429"},{"relation_name":"is_a","term_name":"iTRAQ8plex reporter+balance reagent acylated residue","termid":"MOD:01526"},{"relation_name":"is_a","term_name":"modifications with monoisotopic mass differences that are nominally equal at 304.199039 Da","termid":"MOD:01584"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iTRAQ8plex-115 reporter+balance reagent acylated residue","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"},{"name":"Accurate mass for 115, 118, 119 & 121","type":"related"},{"name":"Applied Biosystems iTRAQ(TM) multiplexed quantitation chemistry","type":"related"},{"name":"iTRAQ8plex:13C(6)15N(2)","type":"related"}],"termid":"MOD:01542"}


id: PBO:0029061
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-vacuoles_present_in_increased_numbers","termid":"PBO:0029061"}


id: MONDO:0018299
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete sphingolipidosis with epilepsy (obsolete MONDO:0018299)","secondary_identifiers":["Orphanet:371442"],"termid":"MONDO:0018299","xrefs":{"Monarch":{"xref_id":"0018299"}}}


id: GO:0006046
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of N-acetylglucosamine. The D isomer is a common structural unit of glycoproteins in plants, bacteria and animals; it is often the terminal sugar of an oligosaccharide group of a glycoprotein.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acetylglucosamine metabolic process","termid":"GO:0006044"},{"relation_name":"is_a","term_name":"glucosamine-containing compound catabolic process","termid":"GO:1901072"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"N-acetylglucosamine catabolic process","synonyms":[{"name":"N-acetylglucosamine breakdown","type":"exact"},{"name":"N-acetylglucosamine catabolism","type":"exact"},{"name":"N-acetylglucosamine degradation","type":"exact"}],"termid":"GO:0006046"}


id: PBO:0034339
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_branching_part","termid":"PBO:0034339"}


id: MONDO:1010605
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenital hypothyroidism that occurs in goat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital hypothyroidism, non-human animal","termid":"MONDO:1010057"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital hypothyroidism, goat","secondary_identifiers":["OMIA:000536-9925"],"termid":"MONDO:1010605","xrefs":{"Monarch":{"xref_id":"1010605"}}}


id: PBO:0049231
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamate metabotropic receptor 4","termid":"PBO:0049231"}


id: _global:evidence_for_feature
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"B is evidence_for_feature A, if an instance of B supports the existence of A.","definition_xrefs":["SO:ke"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"evidence_for_feature","termid":"_global:evidence_for_feature"}


id: PBO:0068728
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4atac small nuclear 17, pseudogene","termid":"PBO:0068728"}


id: PBO:0041386
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C5orf34 antisense RNA 1","termid":"PBO:0041386"}


id: PBO:0076570
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TBC1 domain family member 3K","termid":"PBO:0076570"}


id: GO:0061264
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the developmental fate of a cell becomes restricted such that it will develop into a mesonephric glomerular mesangial cell.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glomerular mesangial cell fate commitment","termid":"GO:0072152"},{"relation_name":"part_of","term_name":"mesonephric glomerular mesangial cell differentiation","termid":"GO:0061259"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesonephric glomerular mesangial cell fate commitment","termid":"GO:0061264"}


id: GO:0050764
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of phagocytosis, the process in which phagocytes engulf external particulate material.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of endocytosis","termid":"GO:0030100"},{"relation_name":"regulates","term_name":"phagocytosis","termid":"GO:0006909"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0016192","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of phagocytosis","termid":"GO:0050764"}


id: GO:0030247
data:
  {"annotated_genes":["SJAG_03535","SJAG_00981","SJAG_00667"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[100519],"is_not":false,"summary":null,"term":"GO:0030247"},{"annotations":[60671],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030248"},{"annotations":[118905],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001065"}]},"cv_name":"molecular_function","definition":"Binding to a polysaccharide, a polymer of many (typically more than 10) monosaccharide residues linked glycosidically.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate binding","termid":"GO:0030246"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00667":null,"SJAG_00981":null,"SJAG_03535":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"polysaccharide binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0002506"],"synonyms":[{"name":"polysaccharide assembly with MHC class II protein complex","type":"narrow"}],"termid":"GO:0030247","terms_by_termid":{"GO:0030247":null,"GO:0030248":null,"GO:2001065":null}}


id: PBO:0046780
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EYA transcriptional coactivator and phosphatase 1","termid":"PBO:0046780"}


id: PBO:0090805
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane anchored protein, claudin family, SUR7 subfamily, predicted membrane sensor Pun1","termid":"PBO:0090805"}


id: PBO:0045774
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ecm29 proteasome adaptor and scaffold","termid":"PBO:0045774"}


id: PBO:0040120
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat and SOCS box containing 7","termid":"PBO:0040120"}


id: GO:0110101
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of L-valine into the vacuole across the vacuolar membrane.","definition_xrefs":["GOC:al","PMID:20944394"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neutral amino acid transmembrane import into vacuole","termid":"GO:0034491"},{"relation_name":"is_a","term_name":"L-valine transmembrane transport","termid":"GO:1903785"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179","GO:0055085"],"is_obsolete":false,"name":"L-valine transmembrane import into vacuole","termid":"GO:0110101"}


id: GO:0021940
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that activates or increases the rate or extent of granule cell precursor proliferation.","definition_xrefs":["GOC:dph","GOC:dgh","GOC:cls","GOC:jid","PMID:15157725","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cerebellar granule cell precursor proliferation","termid":"GO:0021936"},{"relation_name":"is_a","term_name":"positive regulation of neural precursor cell proliferation","termid":"GO:2000179"},{"relation_name":"positively_regulates","term_name":"cerebellar granule cell precursor proliferation","termid":"GO:0021930"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cerebellar granule cell precursor proliferation","synonyms":[{"name":"activation of granule cell precursor proliferation","type":"narrow"},{"name":"stimulation of granule cell precursor proliferation","type":"narrow"},{"name":"up regulation of granule cell precursor proliferation","type":"exact"},{"name":"up-regulation of granule cell precursor proliferation","type":"exact"},{"name":"upregulation of granule cell precursor proliferation","type":"exact"}],"termid":"GO:0021940"}


id: PR:Q9US34
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC1039.07c gene.","definition_xrefs":["UniProtKB:Q9US34","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized aminotransferase C1039.07c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1039.07c","synonyms":[{"name":"Spom972h-SPAC1039.07c","type":"exact"}],"termid":"PR:Q9US34"}


id: PBO:0091155
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L4","termid":"PBO:0091155"}


id: PBO:0050613
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydroxysteroid 17-beta dehydrogenase 6","termid":"PBO:0050613"}


id: PBO:0038654
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acid phosphatase 4","termid":"PBO:0038654"}


id: PBO:0070707
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L9 pseudogene 12","termid":"PBO:0070707"}


id: MONDO:0004926
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of the lacrimal sac.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"acute inflammation of lacrimal passage","termid":"MONDO:0004055"},{"relation_name":"is_a","term_name":"inflammatory disease","termid":"MONDO:0021166"},{"relation_name":"is_a","term_name":"nasolacrimal duct disorder","termid":"MONDO:0044984"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"dacryocystitis","secondary_identifiers":["DOID:9938","NCIT:C34521","UMLS:C0010930","ICD9:375.30","SCTID:85777005","MEDGEN:3686","MESH:D003607","icd11.foundation:1034960983"],"synonyms":[{"name":"Dacryoadenitides","type":"exact"},{"name":"Dacryocystitides","type":"exact"},{"name":"dacryoadenitis","type":"related"},{"name":"inflammation of lacrimal sac","type":"exact"},{"name":"lacrimal sac inflammation","type":"exact"}],"termid":"MONDO:0004926","xrefs":{"Monarch":{"xref_id":"0004926"}}}


id: PBO:0063869
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol glycan anchor biosynthesis class B","termid":"PBO:0063869"}


id: FYPO:0003473
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An inviable phenotype observed in the vegetative growth phase of the life cycle in which a cell undergoes septation despite abnormal chromosome segregation, producing inviable daughter cells, and in which the septum forms in a position that partitions both nuclei into one compartment, when the cell is subject to salt stress. Cell separation may or may not be completed.","definition_xrefs":["PomBase:vw","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoseptate vegetative cell with binucleate and anucleate compartments","termid":"FYPO:0003166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000138","FYPO:0000002","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"septation following abnormal chromosome segregation, with binucleate and anucleate compartment formation during cellular response to salt stress","synonyms":[{"name":"septation following abnormal chromosome segregation, with anucleate cell formation during cellular response to salt stress during mitotic cell cycle","type":"related"},{"name":"septation following abnormal chromosome segregation, with anucleate cell formation during cellular response to salt stress during vegetative growth","type":"exact"},{"name":"septation following abnormal chromosome segregation, with binucleate cell formation during cellular response to salt stress","type":"exact"}],"termid":"FYPO:0003473"}


id: MONDO:1010465
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Patent ductus arteriosus that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"patent ductus arteriosus, non-human animal","termid":"MONDO:1010017"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"patent ductus arteriosus, dog","secondary_identifiers":["OMIA:000779-9615"],"termid":"MONDO:1010465","xrefs":{"Monarch":{"xref_id":"1010465"}}}


id: PBO:0067655
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 832, pseudogene","termid":"PBO:0067655"}


id: GO:0019815
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An immunoglobulin complex that is present in the plasma membrane of B cells and that in its canonical form is composed of two identical immunoglobulin heavy chains and two identical immunoglobulin light chains and a signaling subunit, a heterodimer of the Ig-alpha and Ig-beta proteins.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immunoglobulin complex","termid":"GO:0019814"},{"relation_name":"is_a","term_name":"plasma membrane signaling receptor complex","termid":"GO:0098802"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005886","GO:0005575"],"is_obsolete":false,"name":"B cell receptor complex","secondary_identifiers":["GO:0042570"],"synonyms":[{"name":"B cell receptor accessory molecule complex","type":"related"},{"name":"B lymphocyte receptor complex","type":"exact"},{"name":"B-cell receptor complex","type":"exact"},{"name":"B-lymphocyte receptor complex","type":"exact"},{"name":"BCR complex","type":"exact"},{"name":"antibody","type":"related"},{"name":"immunoglobulin complex, membrane bound","type":"exact"}],"termid":"GO:0019815"}


id: GO:1903444
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of brown fat cell differentiation.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:23977283"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of fat cell differentiation","termid":"GO:0045599"},{"relation_name":"is_a","term_name":"regulation of brown fat cell differentiation","termid":"GO:0090335"},{"relation_name":"negatively_regulates","term_name":"brown fat cell differentiation","termid":"GO:0050873"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of brown fat cell differentiation","synonyms":[{"name":"down regulation of brown adipocyte cell differentiation","type":"exact"},{"name":"down regulation of brown adipocyte differentiation","type":"exact"},{"name":"down regulation of brown fat cell differentiation","type":"exact"},{"name":"down-regulation of brown adipocyte cell differentiation","type":"exact"},{"name":"down-regulation of brown adipocyte differentiation","type":"exact"},{"name":"down-regulation of brown fat cell differentiation","type":"exact"},{"name":"downregulation of brown adipocyte cell differentiation","type":"exact"},{"name":"downregulation of brown adipocyte differentiation","type":"exact"},{"name":"downregulation of brown fat cell differentiation","type":"exact"},{"name":"inhibition of brown adipocyte cell differentiation","type":"narrow"},{"name":"inhibition of brown adipocyte differentiation","type":"narrow"},{"name":"inhibition of brown fat cell differentiation","type":"narrow"},{"name":"negative regulation of brown adipocyte cell differentiation","type":"exact"},{"name":"negative regulation of brown adipocyte differentiation","type":"exact"}],"termid":"GO:1903444"}


id: MONDO:0019889
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Distal trisomy 22q is a rare chromosomal anomaly syndrome, resulting from the partial duplication of the long arm of chromosome 22, with variable phenotype principally characterized by varying degrees of intellectual disability and developmental delay, pre- and postnatal growth deficiency, hypotonia, and craniofacial dysmorphism (incl. microcephaly, hypertelorism, narrow and upslanted palpebral fissures, epicanthic folds, low-set dysplastic ears, broad and depressed nasal bridge, cleft lip an/or palate, long philtrum, retro/micrognathia). Congenital heart defects, as well as cerebral, skeletal, renal and genital anomalies, have also been reported.","definition_xrefs":["Orphanet:96109"],"direct_ancestors":[{"relation_name":"is_a","term_name":"partial duplication of the long arm of chromosome 22","termid":"MONDO:0016972"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"distal trisomy 22q","secondary_identifiers":["MEDGEN:1642344","GARD:19322","SCTID:764512003","UMLS:C4706936"],"synonyms":[{"name":"distal duplication 22q","type":"exact"},{"name":"distal trisomy type 22q","type":"exact"},{"name":"telomeric duplication 22q","type":"exact"},{"name":"trisomy 22qter","type":"exact"}],"termid":"MONDO:0019889","xrefs":{"Monarch":{"xref_id":"0019889"}}}


id: PBO:0068972
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 216, pseudogene","termid":"PBO:0068972"}


id: FYPO:0000370
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which RNA modification is abnormal. All RNA modification may be abnormal, or one or more specific RNA modifications may be selectively affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleic acid metabolism phenotype during vegetative growth","termid":"FYPO:0001347"},{"relation_name":"is_a","term_name":"abnormal metabolic process during vegetative growth","termid":"FYPO:0001363"},{"relation_name":"is_a","term_name":"abnormal RNA metabolic process","termid":"FYPO:0004851"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000294","FYPO:0005447","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"abnormal RNA modification","synonyms":[{"name":"RNA modification: abnormal","type":"related"},{"name":"abnormal RNA modification during mitotic cell cycle","type":"related"},{"name":"abnormal RNA modification during vegetative growth","type":"exact"}],"termid":"FYPO:0000370"}


id: MONDO:0020111
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete constitutional megaloblastic anemia due to folate metabolism disorder (obsolete MONDO:0020111)","secondary_identifiers":["Orphanet:98408"],"termid":"MONDO:0020111","xrefs":{"Monarch":{"xref_id":"0020111"}}}


id: PBO:0042514
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDAN1 interacting nuclease 1","termid":"PBO:0042514"}


id: PBO:0065942
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RACK1 pseudogene 2","termid":"PBO:0065942"}


id: PBO:0002311
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.1.1.41","termid":"PBO:0002311"}


id: PBO:0034072
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-transcribed_from","termid":"PBO:0034072"}


id: MONDO:0013885
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare multisystemic genetic disorder characterized by a characteristic facial features with macrocephaly, overgrowth in infancy, intellectual disability and behavioral problems including anxieties and aggressiveness.","definition_xrefs":["Orphanet:420179"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"Sotos syndrome","termid":"MONDO:0019349"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-variable intellectual disability syndrome","termid":"MONDO:0015160"},{"relation_name":"is_a","term_name":"overgrowth syndrome","termid":"MONDO:0019716"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Malan overgrowth syndrome","secondary_identifiers":["UMLS:C3553660","DOID:0112102","SCTID:763795006","GARD:13811","MEDGEN:766574","OMIM:614753"],"synonyms":[{"name":"Malan syndrome","type":"related"},{"name":"SOTOS2","type":"related"},{"name":"Sotos syndrome 2","type":"exact"},{"name":"Sotos syndrome type 2","type":"exact"}],"termid":"MONDO:0013885","xrefs":{"Monarch":{"xref_id":"0013885"}}}


id: GO:0043793
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-hydroxybenzoate + 5-phospho-alpha-D-ribose 1-diphosphate + H+ = 4-(beta-D-ribofuranosyl)phenol 5'-phosphate + CO2 + diphosphate. Both 4-hydroxybenzoate and 4-aminobenzoate may be used as substrates, but only the former is known to be produced by methanogenic archaea.","definition_xrefs":["EC:2.4.2.54","PMID:12142414"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentosyltransferase activity","termid":"GO:0016763"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0003674","GO:0016757","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"beta-ribofuranosylaminobenzene 5'-phosphate synthase activity","synonyms":[{"name":"beta-RFAP synthase activity","type":"exact"}],"termid":"GO:0043793"}


id: GO:0062243
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The outer of the two endoplasmic reticulum-derived lipid bilayer membranes that bound a double membrane vesicle viral factory.","definition_xrefs":["PMID:22440839"],"direct_ancestors":[{"relation_name":"is_a","term_name":"double membrane vesicle viral factory membrane","termid":"GO:0062242"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"double membrane vesicle viral factory outer membrane","synonyms":[{"name":"outer membrane of double membrane vesicle viral factory","type":"exact"}],"termid":"GO:0062243"}


id: PBO:0053255
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LIM homeobox 8","termid":"PBO:0053255"}


id: PBO:0049314
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione S-transferase theta 2B","termid":"PBO:0049314"}


id: PBO:0075767
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serrate, RNA effector molecule","termid":"PBO:0075767"}


id: PBO:0073426
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splicing factor 3a subunit 2","termid":"PBO:0073426"}


id: SO:0001491
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The status of a whole genome sequence, with less than 1 error per 100,000 base pairs.","definition_xrefs":["DOI:10.1126"],"direct_ancestors":[{"relation_name":"is_a","term_name":"whole_genome_sequence_status","termid":"SO:0001499"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"finished_genome","synonyms":[{"name":"finished","type":"exact"},{"name":"finished genome","type":"exact"}],"termid":"SO:0001491"}


id: PBO:0069132
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 382, pseudogene","termid":"PBO:0069132"}


id: PBO:0011971
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eisosome assembly protein Seg1","termid":"PBO:0011971"}


id: GO:0048045
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: all-trans-pentaprenyl diphosphate + isopentenyl diphosphate = all-trans-hexaprenyl diphosphate + diphosphate.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete trans-pentaprenyltranstransferase activity (obsolete GO:0048045)","synonyms":[{"name":"all-trans-hexaprenyl-diphosphate synthase activity","type":"related"},{"name":"all-trans-pentaprenyl-diphosphate:isopentenyl-diphosphate pentaprenyltranstransferase activity","type":"related"},{"name":"hexaprenyl diphosphate synthase activity","type":"related"},{"name":"hexaprenyl pyrophosphate synthetase activity","type":"exact"}],"termid":"GO:0048045"}


id: MONDO:0016286
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete adenoid cystic carcinoma of the cervix uteri (obsolete MONDO:0016286)","termid":"MONDO:0016286","xrefs":{"Monarch":{"xref_id":"0016286"}}}


id: MONDO:0021120
data:
  {"annotated_genes":["SJAG_03429"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87097],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009050"}]},"cv_name":"mondo","definition":"A hormone producing endocrine neoplasm, associated with a hormonal syndrome.","definition_xrefs":["NCIT:C94759"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endocrine gland neoplasm","termid":"MONDO:0002082"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03429":null},"genotype_count":0,"is_obsolete":false,"name":"functioning endocrine neoplasm","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:458881","UMLS:C2986655","ICDO:8158/1"],"synonyms":[{"name":"functioning endocrine neoplasm","type":"exact"},{"name":"functioning tumor","type":"exact"},{"name":"functioning tumour","type":"exact"}],"termid":"MONDO:0021120","terms_by_termid":{"MONDO:0009050":null},"xrefs":{"Monarch":{"xref_id":"0021120"}}}


id: PR:W6JQK2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC651.07 gene.","definition_xrefs":["PRO:DNx","UniProtKB:W6JQK2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein SPBC651.07 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC651.07","synonyms":[{"name":"Spom972h-SPBC651.07","type":"exact"}],"termid":"PR:W6JQK2"}


id: PBO:0064937
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pancreatic polypeptide","termid":"PBO:0064937"}


id: MOD:00911
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that modifies an L-leucine residue.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification categorized by amino acid modified","termid":"MOD:01157"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"modified L-leucine residue","synonyms":[{"name":"ModLeu","type":"exact"}],"termid":"MOD:00911"}


id: FYPO:0001348
data:
  {"alleles_by_uniquename":{"SJAG_00610:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00610","name":"pck2delta","uniquename":"SJAG_00610:allele-1"},"SJAG_01787:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01787","name":"pck1delta","uniquename":"SJAG_01787:allele-1"},"SJAG_02621:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02621","name":"ago1delta","uniquename":"SJAG_02621:allele-1"},"SJAG_02796:allele-1":{"allele_type":"amino_acid_mutation","description":"A343T","gene_uniquename":"SJAG_02796","name":"pyk1-A343T","uniquename":"SJAG_02796:allele-1"},"SJAG_03118:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03118","name":"leo1delta","uniquename":"SJAG_03118:allele-1"},"SJAG_03689:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03689","name":"dcr1delta","uniquename":"SJAG_03689:allele-1"},"SJAG_03940:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03940","name":"nem2delta","uniquename":"SJAG_03940:allele-1"},"SJAG_04551:allele-2":{"allele_type":"amino_acid_insertion","description":"82-NITCIYDLDIIINPYNFNEVYIYEE-105","gene_uniquename":"SJAG_04551","name":"Pmk1Sj(ins82-105)","uniquename":"SJAG_04551:allele-2"},"SJAG_04551:allele-4":{"allele_type":"partial_amino_acid_deletion","description":"Pmk1 from S. pombe with deleted residues 82-105","gene_uniquename":"SJAG_04551","name":"Pmk1Sp(delta82-105)","uniquename":"SJAG_04551:allele-4"},"SJAG_04697:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04697","name":"gms1delta","uniquename":"SJAG_04697:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[119551,119552],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0006989"}],"single_locus_phenotype":[{"annotations":[119822],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0002033"},{"annotations":[119503],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0005957"},{"annotations":[119818,119814],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001838"},{"annotations":[119521],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0003727"},{"annotations":[119808],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001038"},{"annotations":[119682],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0004165"},{"annotations":[119544],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0006989"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype that affects metabolism in the cell in the vegetative growth phase of the life cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular metabolism phenotype","termid":"FYPO:0000140"},{"relation_name":"is_a","term_name":"cellular process phenotype during vegetative growth","termid":"FYPO:0001331"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00610":null,"SJAG_01787":null,"SJAG_02621":null,"SJAG_02763":null,"SJAG_02796":null,"SJAG_03118":null,"SJAG_03689":null,"SJAG_03940":null,"SJAG_04551":null,"SJAG_04697":null},"genotype_count":10,"genotypes_by_uniquename":{"Pmk1Sj(ins82-105)-82-NITCIYDLDIIINPYNFNEVYIYEE-105-amino_acid_insertion-expression-not_assayed_or_wild_type":{"display_name":"Pmk1Sj(ins82-105)(82-NITCIYDLDIIINPYNFNEVYIYEE-105)","display_uniquename":"Pmk1Sj(ins82-105)-82-NITCIYDLDIIINPYNFNEVYIYEE-105-amino_acid_insertion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04551:allele-2","expression":"Not assayed or wild type"}]}]},"Pmk1Sp(delta82-105)-Pmk1_from_S._pombe_with_deleted_residues_82-105-partial_amino_acid_deletion-expression-not_assayed_or_wild_type":{"display_name":"Pmk1Sp(delta82-105)(Pmk1 from S. pombe with deleted residues 82-105 Δaa)","display_uniquename":"Pmk1Sp(delta82-105)-Pmk1_from_S._pombe_with_deleted_residues_82-105-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04551:allele-4","expression":"Not assayed or wild type"}]}]},"ago1delta__leo1delta":{"display_name":"ago1delta leo1delta","display_uniquename":"ago1delta__leo1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02621:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03118:allele-1","expression":"Null"}]}]},"dcr1delta":{"display_name":"dcr1delta","display_uniquename":"dcr1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03689:allele-1","expression":"Null"}]}]},"dcr1delta__leo1delta":{"display_name":"dcr1delta leo1delta","display_uniquename":"dcr1delta__leo1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03689:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03118:allele-1","expression":"Null"}]}]},"gms1delta":{"display_name":"gms1delta","display_uniquename":"gms1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04697:allele-1","expression":"Null"}]}]},"nem2delta":{"display_name":"nem2delta","display_uniquename":"nem2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03940:allele-1","expression":"Null"}]}]},"pck1delta":{"display_name":"pck1delta","display_uniquename":"pck1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01787:allele-1","expression":"Null"}]}]},"pck2delta":{"display_name":"pck2delta","display_uniquename":"pck2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00610:allele-1","expression":"Null"}]}]},"pyk1-A343T-A343T-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"pyk1-A343T(aa)","display_uniquename":"pyk1-A343T-A343T-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02796:allele-1","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_03118","SJAG_02621","SJAG_03689"],"name":"cellular metabolism phenotype during vegetative growth","references_by_uniquename":{"PMID:26774782":null,"PMID:34198697":null,"PMID:35226668":null,"PMID:36058798":null,"PMID:37164017":null},"single_locus_annotated_genes":["SJAG_04551","SJAG_02796","SJAG_04697","SJAG_03689","SJAG_03940","SJAG_01787","SJAG_00610"],"single_locus_genotype_uniquenames":["nem2delta","pck2delta","Pmk1Sj(ins82-105)-82-NITCIYDLDIIINPYNFNEVYIYEE-105-amino_acid_insertion-expression-not_assayed_or_wild_type","dcr1delta","pyk1-A343T-A343T-amino_acid_mutation-expression-not_assayed_or_wild_type","Pmk1Sp(delta82-105)-Pmk1_from_S._pombe_with_deleted_residues_82-105-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","pck1delta","gms1delta"],"synonyms":[{"name":"cellular metabolism phenotype during mitotic cell cycle","type":"related"},{"name":"fission yeast cellular metabolism phenotype during vegetative growth","type":"exact"}],"termid":"FYPO:0001348","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000126":null,"FYECO:0000162":null,"FYPO:0001038":null,"FYPO:0001838":null,"FYPO:0002033":null,"FYPO:0003727":null,"FYPO:0004165":null,"FYPO:0005957":null,"FYPO:0006989":null,"FYPO_EXT:0000001":null}}


id: PBO:0069107
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 355, pseudogene","termid":"PBO:0069107"}


id: GO:0003691
data:
  {"annotated_genes":["SJAG_02212","SJAG_01677","SJAG_01777"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[74539,80612,90132],"is_not":false,"summary":null,"term":"GO:0003691"}]},"cv_name":"molecular_function","definition":"Binding to double-stranded telomere-associated DNA.","definition_xrefs":["GOC:jl","ISBN:0321000382"],"direct_ancestors":[{"relation_name":"is_a","term_name":"double-stranded DNA binding","termid":"GO:0003690"},{"relation_name":"is_a","term_name":"telomeric DNA binding","termid":"GO:0042162"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01677":null,"SJAG_01777":null,"SJAG_02212":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003677"}],"interesting_parent_ids":["GO:0003677","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"double-stranded telomeric DNA binding","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0003691","terms_by_termid":{"GO:0003691":null}}


id: GO:0033208
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. OBSOLETE. Catalysis of the reaction: UDP-N-acetylgalactosamine + N-acetylneuraminyl-alpha-2,3-galactosyl-beta-oligosaccharide = UDP + N-acetylgalactosaminyl-N-acetylneuraminyl-alpha-2,3-galactosyl-beta-oligosaccharide.","definition_xrefs":["PMID:16024623","GOC:mah","PMID:12678917"],"gene_count":0,"genotype_count":0,"name":"obsolete obsolete UDP-N-acetylgalactosamine:N-acetylneuraminyl-alpha-2,3-galactosyl-beta-R 1,4-N-acetylgalactosaminyltransferase activity (obsolete GO:0033208)","synonyms":[{"name":"Sda beta 1,4GalNAc transferase","type":"related"},{"name":"UDP-GalNAc:Neu5Ac-alpha-2-Gal-beta-1-R beta-1,4-N-acetylgalactosaminyltransferase activity","type":"exact"}],"termid":"GO:0033208"}


id: PBO:0048178
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucose-6-phosphatase regulator","termid":"PBO:0048178"}


id: MONDO:0005422
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A distinct, highly heritable Hodgkin lymphoma subtype.","definition_xrefs":["EFO:0004708"],"gene_count":0,"genotype_count":0,"name":"obsolete nodular sclerosis Hodgkin lymphoma (obsolete MONDO:0005422)","termid":"MONDO:0005422","xrefs":{"Monarch":{"xref_id":"0005422"}}}


id: GO:0019864
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an immunoglobulin of an IgG isotype.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immunoglobulin binding","termid":"GO:0019865"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"IgG binding","termid":"GO:0019864"}


id: GO:0002901
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any apoptotic process in a B cell that is mature, having left the bone marrow.","definition_xrefs":["CL:0000785","GOC:mtg_apoptosis","GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"B cell apoptotic process","termid":"GO:0001783"},{"relation_name":"part_of","term_name":"B cell homeostasis","termid":"GO:0001782"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mature B cell apoptotic process","synonyms":[{"name":"apoptosis of mature B cells","type":"exact"},{"name":"apoptosis of mature B lymphocytes","type":"exact"},{"name":"apoptosis of mature B-cells","type":"exact"},{"name":"apoptosis of mature B-lymphocytes","type":"exact"},{"name":"mature B cell apoptosis","type":"narrow"},{"name":"mature B cell programmed cell death by apoptosis","type":"exact"},{"name":"mature B lymphocyte apoptosis","type":"exact"},{"name":"mature B lymphocyte programmed cell death by apoptosis","type":"exact"},{"name":"mature B-cell apoptosis","type":"exact"},{"name":"mature B-cell programmed cell death by apoptosis","type":"exact"},{"name":"mature B-lymphocyte apoptosis","type":"exact"},{"name":"mature B-lymphocyte programmed cell death by apoptosis","type":"exact"},{"name":"programmed cell death of mature B cells by apoptosis","type":"exact"},{"name":"programmed cell death of mature B lymphocytes by apoptosis","type":"exact"},{"name":"programmed cell death of mature B-cells by apoptosis","type":"exact"},{"name":"programmed cell death of mature B-lymphocytes by apoptosis","type":"exact"},{"name":"programmed cell death, mature B cells","type":"exact"},{"name":"programmed cell death, mature B lymphocytes","type":"exact"},{"name":"programmed cell death, mature B-cells","type":"exact"},{"name":"programmed cell death, mature B-lymphocytes","type":"exact"}],"termid":"GO:0002901"}


id: PBO:0091679
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human GCP3","termid":"PBO:0091679"}


id: PBO:0002768
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Noc2p-Noc3p complex subunit Noc2 family (predicted)","termid":"PBO:0002768"}


id: MONDO:0006027
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A synovial sarcoma (disease) that involves the breast.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"breast sarcoma","termid":"MONDO:0002490"},{"relation_name":"is_a","term_name":"synovial sarcoma","termid":"MONDO:0010434"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"breast synovial sarcoma","synonyms":[{"name":"breast synovial sarcoma (disease)","type":"exact"}],"termid":"MONDO:0006027","xrefs":{"Monarch":{"xref_id":"0006027"}}}


id: PBO:0084966
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-acetyltransferase; confers resistance to the sphingolipid biosynthesis inhibitor myriocin (ISP-1) by converting it into N-acetyl-myriocin, co-operates with Ypk1p in mediating resistance to myriocin","termid":"PBO:0084966"}


id: MONDO:0003439
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An exophytic glandular neoplasm of the bladder, morphologically similar to its intestinal counterpart. It often coexists with in situ or infiltrating bladder adenocarcinoma.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"villous adenoma","termid":"MONDO:0000502"},{"relation_name":"is_a","term_name":"urinary bladder neoplasm","termid":"MONDO:0004987"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"urinary bladder villous adenoma","secondary_identifiers":["MEDGEN:234977","DOID:5427","UMLS:C1336893","NCIT:C7414"],"synonyms":[{"name":"bladder villous adenoma","type":"exact"},{"name":"urinary bladder villous adenoma","type":"exact"},{"name":"villous adenoma of the urinary bladder","type":"exact"},{"name":"villous adenoma of urinary bladder","type":"exact"}],"termid":"MONDO:0003439","xrefs":{"Monarch":{"xref_id":"0003439"}}}


id: PBO:0077931
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TPTE2 pseudogene 4","termid":"PBO:0077931"}


id: GO:0007614
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The memory process that deals with the storage, retrieval and modification of information received a short time (up to about 30 minutes) ago. This type of memory is typically dependent on direct, transient effects of second messenger activation.","definition_xrefs":["ISBN:0582227089"],"direct_ancestors":[{"relation_name":"is_a","term_name":"memory","termid":"GO:0007613"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"short-term memory","secondary_identifiers":["Wikipedia:Short-term_memory"],"termid":"GO:0007614"}


id: GO:1900764
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving emericellin.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ether metabolic process","termid":"GO:0018904"},{"relation_name":"is_a","term_name":"phenol-containing compound metabolic process","termid":"GO:0018958"},{"relation_name":"is_a","term_name":"secondary metabolic process","termid":"GO:0019748"},{"relation_name":"is_a","term_name":"xanthone-containing compound metabolic process","termid":"GO:2001305"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0019748","GO:0008150"],"is_obsolete":false,"name":"emericellin metabolic process","synonyms":[{"name":"Variecoxanthone B metabolic process","type":"related"},{"name":"Variecoxanthone B metabolism","type":"related"},{"name":"emericellin metabolism","type":"exact"}],"termid":"GO:1900764"}


id: GO:1903338
data:
  {"annotated_genes":["SJAG_04666","SJAG_00424","SJAG_03705","SJAG_02278","SJAG_02258","SJAG_04659","SJAG_02684","SJAG_04551","SJAG_04462","SJAG_03704","SJAG_00163","SJAG_00661","SJAG_04522","SJAG_03655","SJAG_04771","SJAG_01787","SJAG_04668","SJAG_01255","SJAG_00610","SJAG_01181"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[74572,107986,108826,110486],"is_not":false,"summary":null,"term":"GO:1903338"},{"annotations":[102507,111364],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903340"},{"annotations":[87875,92785],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140748"},{"annotations":[118290,118420,92769,91132,103209,106289,105715],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090334"},{"annotations":[89801,103211,92791,95307],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070610"},{"annotations":[102510,93076,100546],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032995"},{"annotations":[111365,71959,87950],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060237"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cell wall organization or biogenesis.","definition_xrefs":["GOC:vw","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular process","termid":"GO:0050794"},{"relation_name":"regulates","term_name":"cell wall organization or biogenesis","termid":"GO:0071554"}],"gene_count":20,"genes_by_uniquename":{"SJAG_00163":null,"SJAG_00424":null,"SJAG_00610":null,"SJAG_00661":null,"SJAG_01181":null,"SJAG_01255":null,"SJAG_01787":null,"SJAG_02258":null,"SJAG_02278":null,"SJAG_02684":null,"SJAG_03655":null,"SJAG_03704":null,"SJAG_03705":null,"SJAG_04462":null,"SJAG_04522":null,"SJAG_04551":null,"SJAG_04659":null,"SJAG_04666":null,"SJAG_04668":null,"SJAG_04771":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0071554"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0071554","GO:0008150"],"is_obsolete":false,"name":"regulation of cell wall organization or biogenesis","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"regulation of cell wall organisation or biogenesis","type":"exact"},{"name":"regulation of cell wall organization or biogenesis at cellular level","type":"exact"},{"name":"regulation of cellular cell wall organisation or biogenesis","type":"exact"},{"name":"regulation of cellular cell wall organization or biogenesis","type":"exact"}],"termid":"GO:1903338","terms_by_termid":{"GO:0032995":null,"GO:0060237":null,"GO:0070610":null,"GO:0090334":null,"GO:0140748":null,"GO:1903338":null,"GO:1903340":null}}


id: GO:0061195
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process pertaining to the initial formation of the taste bud from unspecified parts. The taste bud is a specialized area of the tongue that contains taste receptors.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"taste bud morphogenesis","termid":"GO:0061194"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"taste bud formation","termid":"GO:0061195"}


id: PBO:0061254
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nitric oxide synthase interacting protein","termid":"PBO:0061254"}


id: GO:0018707
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 1-phenanthrol + X-CH3 = X + 1-methoxyphenanthrene.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 1-phenanthrol methyltransferase activity (obsolete GO:0018707)","termid":"GO:0018707"}


id: GO:0045830
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of isotype switching.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of immunoglobulin production","termid":"GO:0002639"},{"relation_name":"is_a","term_name":"positive regulation of immunoglobulin mediated immune response","termid":"GO:0002891"},{"relation_name":"is_a","term_name":"regulation of isotype switching","termid":"GO:0045191"},{"relation_name":"is_a","term_name":"positive regulation of DNA recombination","termid":"GO:0045911"},{"relation_name":"is_a","term_name":"positive regulation of B cell activation","termid":"GO:0050871"},{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"positively_regulates","term_name":"isotype switching","termid":"GO:0045190"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006310"},{"rel_name":"positively_regulates","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0006310"},{"rel_name":"positively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0006310","GO:0006259","GO:0008150"],"is_obsolete":false,"name":"positive regulation of isotype switching","synonyms":[{"name":"activation of isotype switching","type":"narrow"},{"name":"positive regulation of class switch recombination","type":"exact"},{"name":"positive regulation of class switching","type":"exact"},{"name":"positive regulation of isotype switch recombination","type":"exact"},{"name":"stimulation of isotype switching","type":"narrow"},{"name":"up regulation of isotype switching","type":"exact"},{"name":"up-regulation of isotype switching","type":"exact"},{"name":"upregulation of isotype switching","type":"exact"}],"termid":"GO:0045830"}


id: PBO:0075740
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SRP54 antisense RNA 1","termid":"PBO:0075740"}


id: GO:1902417
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of (+)-abscisic acid D-glucopyranosyl ester from one side of a membrane to the other.","definition_xrefs":["GOC:TermGenie","PMID:24028845"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucoside transmembrane transporter activity","termid":"GO:0042947"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"(+)-abscisic acid D-glucopyranosyl ester transmembrane transporter activity","synonyms":[{"name":"ABA-GE transmembrane transporter activity","type":"exact"},{"name":"abscisic acid glucosyl ester transmembrane transporter activity","type":"exact"}],"termid":"GO:1902417"}


id: GO:0050025
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-glutamate + O2 + H2O = 2-oxoglutarate + NH3 + H2O2.","definition_xrefs":["RHEA:20728"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-amino-acid oxidase activity","termid":"GO:0001716"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"L-glutamate oxidase activity","secondary_identifiers":["EC:1.4.3.11","MetaCyc:L-GLUTAMATE-OXIDASE-RXN"],"synonyms":[{"name":"L-glutamate:oxygen oxidoreductase (deaminating)","type":"related"},{"name":"L-glutamic acid oxidase activity","type":"related"},{"name":"glutamate (acceptor) dehydrogenase activity","type":"related"},{"name":"glutamate oxidase activity","type":"related"},{"name":"glutamic acid oxidase activity","type":"related"},{"name":"glutamic dehydrogenase (acceptor)","type":"related"}],"termid":"GO:0050025"}


id: GO:0045485
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the introduction of an omega-6 double bond into the fatty acid hydrocarbon chain.","definition_xrefs":["PMID:7846158"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","termid":"GO:0016705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"omega-6 fatty acid desaturase activity","secondary_identifiers":["Reactome:R-HSA-2046092","Reactome:R-HSA-2046089"],"termid":"GO:0045485"}


id: FYPO:0001177
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population growth phenotype in which cell growth is decreased relative to normal in a medium containing trehalose as the carbon source.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased vegetative cell population growth","termid":"FYPO:0001355"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000003","FYPO:0002058","FYPO:0002057","FYPO:0005447","FYPO:0000139","FYPO:0002060"],"is_obsolete":false,"name":"decreased cell population growth on trehalose carbon source","synonyms":[{"name":"decreased growth on trehalose carbon source","type":"broad"},{"name":"decreased vegetative cell growth on trehalose carbon source","type":"exact"},{"name":"reduced cell growth on trehalose carbon source","type":"exact"},{"name":"slow cell growth on trehalose carbon source","type":"narrow"}],"termid":"FYPO:0001177"}


id: PBO:0049413
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GUCY2C antisense RNA 1","termid":"PBO:0049413"}


id: MONDO:0009550
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Familial primary hypomagnesemia with hypercalciuria and nephrocalcinosis without severe ocular involvement (FHHN) is a form of familial primary hypomagnesemia (FPH), characterized by recurrent urinary tract infections, nephrolithiasis, bilateral nephrocalcinosis, renal magnesium (Mg) wasting, hypercalciuria and kidney failure.","definition_xrefs":["Orphanet:31043"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nephrocalcinosis","termid":"MONDO:0001567"},{"relation_name":"is_a","term_name":"renal tubular transport disease","termid":"MONDO:0006510"},{"relation_name":"is_a","term_name":"familial primary hypomagnesemia with hypercalciuria and nephrocalcinosis","termid":"MONDO:0017624"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005240"],"is_obsolete":false,"name":"renal hypomagnesemia 3","secondary_identifiers":["SCTID:725033008","UMLS:C0268448","OMIM:248250","GARD:2906","DOID:0060880","MEDGEN:120640","MESH:C537153"],"synonyms":[{"name":"CLDN16 familial primary hypomagnesemia","type":"exact"},{"name":"CLDN16 primary hypomagnesemia","type":"exact"},{"name":"FHHNC without severe ocular involvement","type":"exact"},{"name":"HOMG3","type":"exact"},{"name":"familial primary hypomagnesemia caused by mutation in CLDN16","type":"exact"},{"name":"familial primary hypomagnesemia with hypercalciuria and nephrocalcinosis without severe ocular involvement","type":"exact"},{"name":"hypercalciuria, childhood, self-limiting","type":"related"},{"name":"hypomagnesemia 3, renal","type":"related"},{"name":"hypomagnesemia, familial, with hypercalciuria and nephrocalcinosis","type":"related"},{"name":"hypomagnesemia, familial, with hypercalciuria and nephrocalcinosis hypercalciuria, childhood, self-limiting, included","type":"related"},{"name":"hypomagnesemia, isolated renal","type":"related"},{"name":"hypomagnesemia, primary, due to defect in renal tubular Transport Of magnesium","type":"related"},{"name":"hypomagnesemia, primary, due to defect in renal tubular Transport of magnesium","type":"related"},{"name":"isolated renal hypomagnesemia","type":"exact"},{"name":"magnesium, defect in renal tubular transport of","type":"related"},{"name":"primary hypomagnesemia caused by mutation in CLDN16","type":"exact"},{"name":"primary hypomagnesemia due to defect in renal tubular transport of magnesium","type":"exact"},{"name":"renal hypomagnesemia type 3","type":"exact"}],"termid":"MONDO:0009550","xrefs":{"Monarch":{"xref_id":"0009550"}}}


id: MONDO:0018589
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete secondary glomerular disease (obsolete MONDO:0019724)","termid":"MONDO:0019724"},{"relation_name":"is_a","term_name":"amyloidosis","termid":"MONDO:0019065"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0021179"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0021179"],"is_obsolete":false,"name":"AApoAIV amyloidosis","secondary_identifiers":["GARD:21828","UMLS:C5568805","MEDGEN:1800228","icd11.foundation:1235542353","Orphanet:439232","DOID:0080927"],"synonyms":[{"name":"apolipoprotein A-IV amyloidosis","type":"exact"}],"termid":"MONDO:0018589","xrefs":{"Monarch":{"xref_id":"0018589"}}}


id: PBO:0086254
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that positively regulates actin assembly; forms a homodimer and interacts with G-actin; localization to the bud neck and bud tip requires Spa2p; YFR016C is not an essential gene","termid":"PBO:0086254"}


id: GO:0097046
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Regulation of DNA replication by a mechanism that allows a DNA replication fork to progress beyond a termination site, which is a region containing fork pausing elements that influence the progression and merging of DNA replication forks.","definition_xrefs":["GOC:mcc","GOC:pr","GOC:bf","PMID:20797631"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of DNA replication termination","termid":"GO:2000621"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006260"},{"rel_name":"regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006260","GO:0006259","GO:0008150"],"is_obsolete":false,"name":"replication fork progression beyond termination site","termid":"GO:0097046"}


id: PBO:0035776
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_transcription_during_nitrogen_starvation","termid":"PBO:0035776"}


id: FYPO:0000220
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which RNAs transcribed from the centromere outer repeat region are present at greater levels than normal.","definition_xrefs":["PMID:20211136","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased centromeric transcript level","termid":"FYPO:0004982"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0006551","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"increased centromeric outer repeat transcript level","synonyms":[{"name":"increased accumulation of centromeric outer repeat transcripts","type":"related"},{"name":"increased accumulation of centromeric outer repeat transcripts during vegetative growth","type":"related"},{"name":"increased accumulation of non-coding outer repeat transcripts","type":"exact"},{"name":"increased centromere outer repeat transcript level","type":"exact"},{"name":"increased centromeric outer repeat transcript level during mitotic cell cycle","type":"related"},{"name":"increased centromeric outer repeat transcript level during vegetative growth","type":"exact"},{"name":"increased centromeric outer repeat-derived transcript level","type":"exact"},{"name":"increased level of centromeric outer repeat transcripts","type":"exact"}],"termid":"FYPO:0000220"}


id: GO:0002915
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of central B cell anergy.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of B cell anergy","termid":"GO:0002671"},{"relation_name":"is_a","term_name":"negative regulation of central B cell tolerance induction","termid":"GO:0002896"},{"relation_name":"is_a","term_name":"regulation of central B cell anergy","termid":"GO:0002914"},{"relation_name":"is_a","term_name":"negative regulation of B cell differentiation","termid":"GO:0045578"},{"relation_name":"negatively_regulates","term_name":"central B cell anergy","termid":"GO:0002341"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of central B cell anergy","synonyms":[{"name":"down regulation of central B cell anergy","type":"exact"},{"name":"down-regulation of central B cell anergy","type":"exact"},{"name":"downregulation of central B cell anergy","type":"exact"},{"name":"inhibition of central B cell anergy","type":"narrow"}],"termid":"GO:0002915"}


id: PBO:0027404
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_chromatin_at_replication_origin","termid":"PBO:0027404"}


id: GO:0050135
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NADP+ + H2O = ADP-D-ribose 2'-phosphate + nicotinamide + H+.","definition_xrefs":["RHEA:19849"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing N-glycosyl compounds","termid":"GO:0016799"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016798","GO:0003674","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"NADP+ nucleosidase activity","synonyms":[{"name":"NAD(P)+ nucleosidase activity","type":"broad"},{"name":"NADP nucleosidase activity","type":"exact"},{"name":"NADP(+) nucleosidase activity","type":"exact"},{"name":"NADP+ glycohydrolase activity","type":"related"},{"name":"NADPase activity","type":"related"}],"termid":"GO:0050135"}


id: GO:1905882
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Any cell wall that is part of a other organism.","definition_xrefs":["GO_REF:0000064","PMID:12438152","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete other organism cell wall (obsolete GO:1905882)","termid":"GO:1905882"}


id: PBO:0084684
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial carrier protein; involved in the accumulation of CoA in the mitochondrial matrix; homolog of human Graves disease protein SLC25A16, which complements yeast null mutant; does not encode an isozyme of Leu4p, as first hypothesized","termid":"PBO:0084684"}


id: GO:0032166
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Arrays of septin filaments, or bars, found in a series of filamentous structures. Observed in the chlamydospore membrane during chlamydospore formation.","definition_xrefs":["PMID:16151244","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"septin filament array","termid":"GO:0032160"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"chlamydospore septin filament array","termid":"GO:0032166"}


id: GO:0001217
data:
  {"annotated_genes":["SJAG_05343","SJAG_00124","SJAG_02048","SJAG_00792","SJAG_02730","SJAG_04813","SJAG_00987","SJAG_02898","SJAG_04584","SJAG_03473","SJAG_04009"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[94427,104811,104819,95091,106629,93665,109189,111270,116456,80805],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001227"},{"annotations":[96756],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106250"}]},"cv_name":"molecular_function","definition":"A DNA-binding transcription factor activity that represses or decreases the transcription of specific gene sets.","definition_xrefs":["GOC:txnOH-2018"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA-binding transcription factor activity","termid":"GO:0003700"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00124":null,"SJAG_00792":null,"SJAG_00987":null,"SJAG_02048":null,"SJAG_02730":null,"SJAG_02898":null,"SJAG_03473":null,"SJAG_04009":null,"SJAG_04584":null,"SJAG_04813":null,"SJAG_05343":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003700"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140110"}],"interesting_parent_ids":["GO:0003674","GO:0003700","GO:0140110"],"is_obsolete":false,"name":"DNA-binding transcription repressor activity","references_by_uniquename":{"GO_REF:0000024":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0001141","GO:0001218","GO:0001219","GO:0001220"],"synonyms":[{"name":"bacterial-type DNA binding transcription repressor activity","type":"narrow"},{"name":"bacterial-type RNA polymerase core promoter proximal region sequence-specific DNA binding transcription factor activity involved in negative regulation of transcription","type":"narrow"},{"name":"bacterial-type RNA polymerase transcriptional repressor activity, cadmium ion regulated sequence-specific DNA binding","type":"narrow"},{"name":"bacterial-type RNA polymerase transcriptional repressor activity, copper ion regulated sequence-specific DNA binding","type":"narrow"},{"name":"bacterial-type RNA polymerase transcriptional repressor activity, metal ion regulated sequence-specific DNA binding","type":"narrow"},{"name":"bacterial-type RNA polymerase transcriptional repressor activity, sequence-specific DNA binding","type":"narrow"},{"name":"cadmium ion regulated sequence-specific DNA binding bacterial-type RNA polymerase transcription factor activity involved in negative regulation of transcription","type":"narrow"},{"name":"copper ion regulated sequence-specific DNA binding bacterial-type RNA polymerase transcription factor activity involved in negative regulation of transcription","type":"narrow"},{"name":"metal ion regulated sequence-specific DNA binding bacterial-type RNA polymerase transcription factor activity involved in negative regulation of transcription","type":"narrow"},{"name":"sequence-specific DNA binding bacterial-type RNA polymerase transcription factor activity involved in negative regulation of transcription","type":"narrow"},{"name":"transcriptional repressor activity, bacterial-type RNA polymerase core promoter proximal region sequence-specific binding","type":"narrow"},{"name":"transcriptional repressor activity, bacterial-type RNA polymerase proximal promoter sequence-specific DNA binding","type":"narrow"}],"termid":"GO:0001217","terms_by_termid":{"GO:0001227":null,"GO:0106250":null}}


id: MONDO:0018562
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete hereditary otorhinolaryngological malformation (obsolete MONDO:0018562)","secondary_identifiers":["Orphanet:435603"],"synonyms":[{"name":"genetic otorhinolaryngological malformation","type":"exact"}],"termid":"MONDO:0018562","xrefs":{"Monarch":{"xref_id":"0018562"}}}


id: MONDO:0010759
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Wildervanck syndrome is characterized by the triad of cervical vertebral fusion (Klippel-Feil anomaly), bilateral abducens palsy with retracted eyes (Duane syndrome) and congenital perceptive deafness.","definition_xrefs":["Orphanet:3456"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Klippel-Feil syndrome","termid":"MONDO:0001029"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Wildervanck syndrome","secondary_identifiers":["GARD:5569","ICD9:759.89","OMIM:314600","MedDRA:10069402","SCTID:79665007","UMLS:C0265239","MEDGEN:120518"],"synonyms":[{"name":"COA syndrome","type":"related"},{"name":"Cervicooculoacoustic syndrome","type":"exact"},{"name":"Wildervanck syndrome","type":"exact"},{"name":"cervico-oculo-acoustic dysplasia","type":"related"},{"name":"cervico-oculo-acoustic syndrome","type":"related"}],"termid":"MONDO:0010759","xrefs":{"Monarch":{"xref_id":"0010759"}}}


id: MONDO:0008198
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Parietal foramina with clavicular hypoplasia is a rare genetic bone development disorder characterized by parietal foramina in association with hypoplasia of the clavicles (short abnormal clavicles with tapering lateral ends, with or without loss of the acromion). Additional features may include mild craniofacial dysmorphism (macrocephaly, broad forehead and frontal bossing). No dental abnormalities were reported.","definition_xrefs":["Orphanet:251290"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skeletal dysplasia","termid":"MONDO:0018230"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"parietal foramina with cleidocranial dysplasia","secondary_identifiers":["UMLS:C1868597","MEDGEN:401479","GARD:17207","MESH:C566825","OMIM:168550"],"synonyms":[{"name":"PFMCCD","type":"related"},{"name":"cleidocranial dysplasia with parietal foramina","type":"related"},{"name":"parietal foramina with clavicular hypoplasia","type":"related"},{"name":"parietal foramina with cleidocranial dysostosis","type":"exact"},{"name":"parietal foramina with cleidocranial dysplasia","type":"exact"}],"termid":"MONDO:0008198","xrefs":{"Monarch":{"xref_id":"0008198"}}}


id: MONDO:0024294
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Skin diseases caused by bacteria, fungi, parasites, or viruses.","definition_xrefs":["MESH:D012874"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skin disorder","termid":"MONDO:0005093"},{"relation_name":"is_a","term_name":"infectious disease","termid":"MONDO:0005550"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"skin disorder caused by infection","synonyms":[{"name":"disease, infectious skin","type":"related"},{"name":"diseases, infectious skin","type":"related"},{"name":"infectious skin disease","type":"related"},{"name":"infectious skin diseases","type":"related"},{"name":"skin disease, infectious","type":"related"}],"termid":"MONDO:0024294","xrefs":{"Monarch":{"xref_id":"0024294"}}}


id: GO:0006734
data:
  {"annotated_genes":["SJAG_00027","SJAG_02945","SJAG_02796","SJAG_00714","SJAG_01753","SJAG_02154","SJAG_04192","SJAG_02107","SJAG_03660","SJAG_02135","SJAG_01310","SJAG_06622","SJAG_02369","SJAG_03091","SJAG_03903","SJAG_00461","SJAG_00839","SJAG_00605","SJAG_04334","SJAG_06621","SJAG_04495","SJAG_03828","SJAG_03306","SJAG_00522","SJAG_02009","SJAG_02191","SJAG_03373"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72609],"is_not":false,"summary":null,"term":"GO:0006734"},{"annotations":[105826,109771,105825,105827,106197,116732,104005,109773,95382,109769,109772,106196,109770,103749,98623,78226,94888,109767,98353,109768],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061621"},{"annotations":[88200,96921,112196,116940],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043490"},{"annotations":[95476,95477],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006735"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving reduced nicotinamide adenine dinucleotide (NADH), a coenzyme present in most living cells and derived from the B vitamin nicotinic acid.","definition_xrefs":["ISBN:0618254153","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleotide metabolic process","termid":"GO:0006163"},{"relation_name":"is_a","term_name":"nicotinamide nucleotide metabolic process","termid":"GO:0046496"}],"gene_count":27,"genes_by_uniquename":{"SJAG_00027":null,"SJAG_00461":null,"SJAG_00522":null,"SJAG_00605":null,"SJAG_00714":null,"SJAG_00839":null,"SJAG_01310":null,"SJAG_01753":null,"SJAG_02009":null,"SJAG_02107":null,"SJAG_02135":null,"SJAG_02154":null,"SJAG_02191":null,"SJAG_02369":null,"SJAG_02796":null,"SJAG_02945":null,"SJAG_03091":null,"SJAG_03306":null,"SJAG_03373":null,"SJAG_03660":null,"SJAG_03828":null,"SJAG_03903":null,"SJAG_04192":null,"SJAG_04334":null,"SJAG_04495":null,"SJAG_06621":null,"SJAG_06622":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"NADH metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"NAD (reduced) metabolic process","type":"exact"},{"name":"NAD (reduced) metabolism","type":"exact"},{"name":"NADH metabolism","type":"exact"},{"name":"reduced NAD metabolic process","type":"exact"},{"name":"reduced NAD metabolism","type":"exact"},{"name":"reduced nicotinamide adenine dinucleotide metabolic process","type":"exact"},{"name":"reduced nicotinamide adenine dinucleotide metabolism","type":"exact"}],"termid":"GO:0006734","terms_by_termid":{"GO:0006734":null,"GO:0006735":null,"GO:0043490":null,"GO:0061621":null}}


id: PBO:0043666
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coenzyme Q9","termid":"PBO:0043666"}


id: PBO:0083163
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; almost completely overlaps the verified gene SSB1","termid":"PBO:0083163"}


id: MONDO:0019146
data:
  {"annotated_genes":["SJAG_04743"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87534],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010389"}]},"cv_name":"mondo","definition":"A rare immunodeficiency syndrome, characterized by a narrow vulnerability to poorly virulent mycobacteria, such as bacillus Calmette-Guerin (BCG) vaccines and environmental mycobacteria (EM), and defined by severe, recurrent infections, either disseminated or localized.","definition_xrefs":["Orphanet:748"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04743":null},"genotype_count":0,"is_obsolete":false,"name":"inherited susceptibility to mycobacterial diseases","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NANDO:1200359","MEDGEN:473805","NANDO:2200759","UMLS:C3266863"],"synonyms":[{"name":"MSMD","type":"exact"},{"name":"Mendelian susceptibility to atypical mycobacteria","type":"exact"},{"name":"Mendelian susceptibility to mycobacterial infections","type":"exact"},{"name":"Mycobacterium caused genetic susceptibility to infections due to particular pathogens","type":"exact"},{"name":"Mycobacterium genetic susceptibility to infections due to particular pathogens","type":"exact"},{"name":"idiopathic infection caused by BCG or atypical mycobacteria","type":"exact"}],"termid":"MONDO:0019146","terms_by_termid":{"MONDO:0010389":null},"xrefs":{"Monarch":{"xref_id":"0019146"}}}


id: FYPO:0002388
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of riboflavin binding by a gene product (usually a protein) in a mutant is abnormal. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal molecular function","termid":"FYPO:0000707"},{"relation_name":"is_a","term_name":"binding phenotype","termid":"FYPO:0001092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000652","FYPO:0001985"],"is_obsolete":false,"name":"abnormal riboflavin binding","termid":"FYPO:0002388"}


id: PR:O42894
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An exosome complex component RRP46 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02536"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exosome complex component rrp46 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC115.01c","secondary_identifiers":["UniProtKB:O42894"],"synonyms":[{"name":"Spom972h-EXOSC5","type":"exact"},{"name":"ribosomal RNA-processing protein 46 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O42894"}


id: PBO:0048450
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gall bladder cancer associated suppressor of pyruvate carboxylase lncRNA","termid":"PBO:0048450"}


id: PBO:0080756
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"xanthine dehydrogenase","termid":"PBO:0080756"}


id: PBO:0029465
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_curved_vacuolated_vegetative_cell","termid":"PBO:0029465"}


id: MONDO:0010884
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"facioscapulohumeral muscular dystrophy","termid":"MONDO:0001347"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"muscular dystrophy, scapulohumeral","secondary_identifiers":["MEDGEN:98373","MESH:C562932","SCTID:240074006","OMIM:600416","UMLS:C0410192","GARD:15317"],"synonyms":[{"name":"muscular dystrophy, scapulohumeral","type":"exact"}],"termid":"MONDO:0010884","xrefs":{"Monarch":{"xref_id":"0010884"}}}


id: MONDO:0024252
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete global developmental delay-neuro-ophthalmological abnormalities-seizures-intellectual disability syndrome (obsolete MONDO:0024252)","secondary_identifiers":["GARD:17893"],"termid":"MONDO:0024252","xrefs":{"Monarch":{"xref_id":"0024252"}}}


id: PR:Q9HDV1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug180 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9HDV1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"steryl acetyl hydrolase mug81 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBPB2B2.02","synonyms":[{"name":"Spom972h-mug180","type":"exact"},{"name":"meiotically up-regulated gene 180 protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9HDV1"}


id: GO:0021984
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the adenohypophysis over time from its initial formation until its mature state. The adenohypophysis is the anterior part of the pituitary. It secretes a variety of hormones and its function is regulated by the hypothalamus.","definition_xrefs":["GOC:cls","GOC:dgh","GOC:dph","GO_REF:0000021","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"pituitary gland development","termid":"GO:0021983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"adenohypophysis development","synonyms":[{"name":"adenophysis development","type":"exact"},{"name":"anterior pituitary development","type":"exact"},{"name":"anterior pituitary gland development","type":"exact"}],"termid":"GO:0021984"}


id: GO:1903564
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein localization to cilium.","definition_xrefs":["GOC:krc","PMID:22072986","GOC:cilia","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein localization","termid":"GO:0032880"},{"relation_name":"regulates","term_name":"protein localization to cilium","termid":"GO:0061512"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of protein localization to cilium","termid":"GO:1903564"}


id: PBO:0065739
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxisomal membrane protein 4","termid":"PBO:0065739"}


id: PBO:0030041
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_transcription_during_iron_starvation","termid":"PBO:0030041"}


id: MONDO:0005452
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disorder characterized by recurrent episodes of binge-eating over which the individual feels a lack of control; these episodes of binge-eating are followed by recurrent compensatory behavior to prevent weight gain, usually self-induced vomiting. In addition, self-evaluation is unduly influenced by body image.","definition_xrefs":["NCIT:C34440"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eating disorder","termid":"MONDO:0005451"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bulimia nervosa","secondary_identifiers":["MEDGEN:389218","NCIT:C97162","DOID:12129","EFO:0005204","icd11.foundation:509381842","UMLS:C2267227","ICD10CM:F50.2","MESH:D002032","MESH:D052018","ICD9:307.51","SCTID:78004001"],"synonyms":[{"name":"bulimia","type":"exact"},{"name":"hyperorexia nervosa","type":"exact"}],"termid":"MONDO:0005452","xrefs":{"Monarch":{"xref_id":"0005452"}}}


id: GO:0071911
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Release of neurotransmitter at the synapse that lasts for just a few milliseconds after action potential invasion.","definition_xrefs":["PMID:19477156","PMID:20643933","GOC:dsf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neurotransmitter secretion","termid":"GO:0007269"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150","GO:0023052"],"is_obsolete":false,"name":"synchronous neurotransmitter secretion","termid":"GO:0071911"}


id: PBO:0052691
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 15","termid":"PBO:0052691"}


id: PBO:0085885
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; involved in invasive and pseudohyphal growth","termid":"PBO:0085885"}


id: PBO:0089815
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome passenger complex subunit, INCENP ortholog Pic1","termid":"PBO:0089815"}


id: PBO:0047824
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"forkhead box O4","termid":"PBO:0047824"}


id: PBO:0011081
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has fused lysosomes","termid":"PBO:0011081"}


id: PBO:0116322
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F1-FO ATP synthase F(o) subunit F","termid":"PBO:0116322"}


id: PBO:0064605
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POU class 3 homeobox 3","termid":"PBO:0064605"}


id: PBO:0111937
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Regulator of Heat Sensitivity","termid":"PBO:0111937"}


id: GO:0060156
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A reflex that occurs in response to suckling, beginning with a nerve impulse from a receptor in the mammary gland and ending with the ejection of milk from the gland. Signaling never reaches a level of consciousness.","definition_xrefs":["GOC:mr","GOC:cjm","GOC:dph","GOC:st"],"direct_ancestors":[{"relation_name":"is_a","term_name":"body fluid secretion","termid":"GO:0007589"},{"relation_name":"is_a","term_name":"secretion by tissue","termid":"GO:0032941"},{"relation_name":"is_a","term_name":"reflex","termid":"GO:0060004"},{"relation_name":"part_of","term_name":"lactation","termid":"GO:0007595"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"milk ejection reflex","synonyms":[{"name":"milk ejection","type":"exact"}],"termid":"GO:0060156"}


id: MONDO:1012443
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"malignant melanoma, non-human animal","termid":"MONDO:1011821"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"malignant melanoma, lion","secondary_identifiers":["OMIA:001724-9689"],"termid":"MONDO:1012443","xrefs":{"Monarch":{"xref_id":"1012443"}}}


id: PBO:0065963
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAD51 recombinase","termid":"PBO:0065963"}


id: PR:Q9USP8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02477","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isocitrate dehydrogenase [NAD] subunit 2, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC902.05c","secondary_identifiers":["UniProtKB:Q9USP8"],"synonyms":[{"name":"NAD(+)-specific ICDH (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-IDH3A","type":"exact"},{"name":"isocitric dehydrogenase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9USP8"}


id: GO:1903441
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within a ciliary membrane.","definition_xrefs":["PMID:22139371","GOC:cilia","GOC:krc","GOC:TermGenie","GO_REF:0000087"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to cilium","termid":"GO:0061512"},{"relation_name":"is_a","term_name":"protein localization to membrane","termid":"GO:0072657"},{"relation_name":"is_a","term_name":"protein localization to cell periphery","termid":"GO:1990778"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein localization to ciliary membrane","synonyms":[{"name":"protein localisation in ciliary membrane","type":"exact"},{"name":"protein localisation to ciliary membrane","type":"exact"},{"name":"protein localization in ciliary membrane","type":"exact"}],"termid":"GO:1903441"}


id: MONDO:0009936
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Primary pulmonary hypoplasia is a rare, isolated, genetic developmental defect during embryogenesis characterized by congential malformation of pulmonary parenchyma with absence of other anomalies. Neonatally patients present with decreased breath sounds, small lung volume and severe respiratory distress that is not responsive to aggressive treatment (including surfactant instillation/ mechanical respiratory support). It is usually not compatible with life.","definition_xrefs":["Orphanet:2257"],"direct_ancestors":[{"relation_name":"is_a","term_name":"respiratory system disorder","termid":"MONDO:0005087"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"familial primary pulmonary hypoplasia","secondary_identifiers":["MEDGEN:141589","GARD:16591","SCTID:277656005","ICD9:748.5","UMLS:C0456891","OMIM:265430","icd11.foundation:1778475393"],"synonyms":[{"name":"lung agenesis","type":"related"},{"name":"primary pulmonary hypoplasia","type":"related"},{"name":"pulmonary hypoplasia, primary","type":"related"}],"termid":"MONDO:0009936","xrefs":{"Monarch":{"xref_id":"0009936"}}}


id: PBO:0086382
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative ATP-dependent RNA helicase of the DEAD-box family; involved in ribosomal biogenesis; required at post-transcriptional step for efficient retrotransposition; essential for growth under anaerobic conditions","termid":"PBO:0086382"}


id: PBO:0029863
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_actin_cortical_patch_morphology_during_mitosis","termid":"PBO:0029863"}


id: MONDO:0002414
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A hemangioma arising from the stomach.","definition_xrefs":["NCIT:C5481"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intra-abdominal hemangioma","termid":"MONDO:0002337"},{"relation_name":"is_a","term_name":"benign neoplasm of stomach","termid":"MONDO:0021449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"gastric hemangioma","secondary_identifiers":["DOID:275","MEDGEN:234297","UMLS:C1333770"],"synonyms":[{"name":"angioma of stomach","type":"exact"},{"name":"angioma of the stomach","type":"exact"},{"name":"gastric angioma","type":"exact"},{"name":"gastric hemangioma","type":"exact"},{"name":"hemangioma of stomach","type":"exact"},{"name":"hemangioma of the stomach","type":"exact"},{"name":"stomach hemangioma","type":"exact"}],"termid":"MONDO:0002414","xrefs":{"Monarch":{"xref_id":"0002414"}}}


id: MONDO:0030058
data:
  {"annotated_genes":["SJAG_03785","SJAG_01344","SJAG_05213"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85719,85720,85721],"is_not":false,"summary":null,"term":"MONDO:0030058"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant nonsyndromic hearing loss","termid":"MONDO:0019587"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01344":null,"SJAG_03785":null,"SJAG_05213":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019497"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0019497","MONDO:0000426"],"is_obsolete":false,"name":"hearing loss, autosomal dominant 77","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C5394499","OMIM:618915","DOID:0112168","GARD:18155","MEDGEN:1709284"],"synonyms":[{"name":"DFNA77","type":"narrow"},{"name":"deafness, autosomal dominant 77","type":"narrow"}],"termid":"MONDO:0030058","terms_by_termid":{"MONDO:0030058":null},"xrefs":{"Monarch":{"xref_id":"0030058"}}}


id: PBO:0056202
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAGE family member A10","termid":"PBO:0056202"}


id: PBO:0057506
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 624","termid":"PBO:0057506"}


id: MONDO:0010879
data:
  {"annotated_genes":["SJAG_00984"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87369],"is_not":false,"summary":null,"term":"MONDO:0010879"}]},"cv_name":"mondo","definition":"Codas syndrome is a multiple congenital anomalies syndrome characterized by Cerebral, Ocular, Dental, Auricular and Skeletal anomalies.","definition_xrefs":["Orphanet:1458"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"},{"relation_name":"is_a","term_name":"spondyloepiphyseal dysplasia","termid":"MONDO:0016761"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00984":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"CODAS syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0111274","MEDGEN:333031","OMIM:600373","SCTID:717772000","MESH:C536434","NCIT:C126744","UMLS:C1838180","GARD:1418"],"synonyms":[{"name":"CODAS syndrome","type":"exact"},{"name":"cerebral, ocular, dental, auricular, and skeletal anomalies syndrome","type":"related"},{"name":"cerebral, ocular, dental, auricular, and skeletal syndrome","type":"related"},{"name":"cerebro-oculo-dento-auriculo-skeletal syndrome","type":"related"},{"name":"cerebrooculodentoauriculoskeletal syndrome","type":"exact"}],"termid":"MONDO:0010879","terms_by_termid":{"MONDO:0010879":null},"xrefs":{"Monarch":{"xref_id":"0010879"}}}


id: PR:P36592
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rad52 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P36592"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA repair and recombination protein rad22 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC30D11.10","synonyms":[{"name":"Spom972h-rad52","type":"exact"}],"termid":"PR:P36592"}


id: PBO:0002895
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically upregulated gene Mug5","termid":"PBO:0002895"}


id: PBO:0067781
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 82","termid":"PBO:0067781"}


id: PBO:0043290
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-type lectin domain containing 9A","termid":"PBO:0043290"}


id: PBO:0053649
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 701","termid":"PBO:0053649"}


id: GO:2000001
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of a DNA damage checkpoint.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular response to stress","termid":"GO:0080135"},{"relation_name":"is_a","term_name":"regulation of cell cycle checkpoint","termid":"GO:1901976"},{"relation_name":"regulates","term_name":"DNA damage checkpoint signaling","termid":"GO:0000077"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of DNA damage checkpoint","synonyms":[{"name":"regulation of DNA damage response, signal transduction resulting in cell cycle arrest","type":"related"}],"termid":"GO:2000001"}


id: FYPO:0004890
data:
  {"alleles_by_uniquename":{"SJAG_01834:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01834","name":"pom152delta","uniquename":"SJAG_01834:allele-1"},"SJAG_03449:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03449","name":"man1delta","uniquename":"SJAG_03449:allele-1"},"SJAG_03449:allele-2":{"allele_type":"partial_amino_acid_deletion","description":"man1DHEH","gene_uniquename":"SJAG_03449","name":"Man1DHEH","uniquename":"SJAG_03449:allele-2"},"SJAG_03449:allele-3":{"allele_type":"amino_acid_insertion_and_deletion","description":"man1-1-488","gene_uniquename":"SJAG_03449","name":"man1-1-488","uniquename":"SJAG_03449:allele-3"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[119618,119619,119620,119622],"is_not":false,"summary":null,"term":"FYPO:0004890"}]},"cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the distance between one or more telomeres and the nuclear envelope is greater than normal during mitosis.","definition_xrefs":["PMID:19948484","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal telomere-nuclear envelope distance during vegetative growth","termid":"FYPO:0004790"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01834":null,"SJAG_03449":null},"genotype_count":4,"genotypes_by_uniquename":{"Man1DHEH-man1DHEH-partial_amino_acid_deletion-expression-not_assayed_or_wild_type":{"display_name":"Man1DHEH(man1DHEH)","display_uniquename":"Man1DHEH-man1DHEH-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03449:allele-2","expression":"Not assayed or wild type"}]}]},"man1-1-488-man1-1-488-amino_acid_insertion_and_deletion-expression-not_assayed_or_wild_type":{"display_name":"man1-1-488(aa)","display_uniquename":"man1-1-488-man1-1-488-amino_acid_insertion_and_deletion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03449:allele-3","expression":"Not assayed or wild type"}]}]},"man1delta":{"display_name":"man1delta","display_uniquename":"man1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03449:allele-1","expression":"Null"}]}]},"pom152delta":{"display_name":"pom152delta","display_uniquename":"pom152delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01834:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"increased telomere-nuclear envelope distance during mitosis","references_by_uniquename":{"PMID:24184107":null},"single_locus_annotated_genes":["SJAG_01834","SJAG_03449"],"single_locus_genotype_uniquenames":["man1delta","Man1DHEH-man1DHEH-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","man1-1-488-man1-1-488-amino_acid_insertion_and_deletion-expression-not_assayed_or_wild_type","pom152delta"],"synonyms":[{"name":"increased distance between telomeres and nuclear envelope during mitosis","type":"exact"},{"name":"increased telomere-nuclear envelope distance during mitosis during vegetative growth","type":"exact"},{"name":"increased telomere-nuclear envelope distance during mitotic nuclear division","type":"exact"}],"termid":"FYPO:0004890","terms_by_termid":{"FYPO:0004890":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null}}


id: MONDO:0800479
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neonatal/infantile epilepsy syndrome where seizures start in the neonate between day 4 and 7 of life and are often unilateral clonic events that recur and may alternate sides from seizure to seizure. Seizures can be repetitive over hours to days. Seizures remit by 4-6 months of age. A proportion of those affected may have seizures in later life. The child is expected to have normal developmental progress. This is distinguished from familial neonatal epilepsy on the basis of family history. These entities may have similar genetic etiologies, with de novo mutations responsible for the lack of family history in self-limited neonatal seizures.","direct_ancestors":[{"relation_name":"is_a","term_name":"neonatal/infantile-onset self-limited epilepsy syndrome","termid":"MONDO:0800488"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"self-limited neonatal seizures","synonyms":[{"name":"SeLNE","type":"exact"}],"termid":"MONDO:0800479","xrefs":{"Monarch":{"xref_id":"0800479"}}}


id: FYPO:0004420
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype in which the phosphorylation of serine residues in one or more specific proteins, or of specific protein sites, occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete increased protein serine phosphorylation (obsolete FYPO:0004420)","synonyms":[{"name":"increased peptidyl-serine phosphorylation","type":"exact"},{"name":"increased serine phosphorylation","type":"exact"}],"termid":"FYPO:0004420"}


id: PBO:0014253
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Insertional Suppressor of Sme2","termid":"PBO:0014253"}


id: MONDO:0024228
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A miliaria that is characterized by ductal occlusion of the papillary dermis causing the gland's secretions to leak between the superficial and deep layers of the skin resulting in a rapidly-spreading flesh-colored rash.","definition_xrefs":["DOID:0070320"],"direct_ancestors":[{"relation_name":"is_a","term_name":"miliaria","termid":"MONDO:0006580"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"miliaria profunda","secondary_identifiers":["SCTID:47317002","UMLS:C0263468","MEDGEN:537908","icd11.foundation:1540615212"],"termid":"MONDO:0024228","xrefs":{"Monarch":{"xref_id":"0024228"}}}


id: SO:0001574
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A splice variant that changes the 2 base region at the 3' end of an intron.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"splice_site_variant","termid":"SO:0001629"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splice_acceptor_variant","secondary_identifiers":["http://snpeff.sourceforge.net/SnpEff_manual.html","http:www.ensembl.org/info/genome/variation/predicted_data.html#consequences","http://snp.gs.washington.edu/SeattleSeqAnnotation137/HelpHowToUse.jsp"],"synonyms":[{"name":"Jannovar:splice_acceptor_variant","type":"exact"},{"name":"Seattleseq:splice-acceptor","type":"exact"},{"name":"VAAST:splice_acceptor_variant","type":"exact"},{"name":"VEP:splice_acceptor_variant","type":"exact"},{"name":"snpEff:SPLICE_SITE_ACCEPTOR","type":"exact"},{"name":"splice acceptor variant","type":"exact"}],"termid":"SO:0001574"}


id: GO:0072514
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of trehalose into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore, that occurs as a result of deprivation of water.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trehalose transport","termid":"GO:0015771"},{"relation_name":"part_of","term_name":"cellular response to water deprivation","termid":"GO:0042631"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"trehalose transport in response to water deprivation","termid":"GO:0072514"}


id: PBO:0046795
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F2R like trypsin receptor 1","termid":"PBO:0046795"}


id: PBO:0005452
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4.1.1.21","termid":"PBO:0005452"}


id: GO:0052713
data:
  {"annotated_genes":["SJAG_01219"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[109201],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052714"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: inositol phosphorylceramide + H2O = C26-phytoceramide + phosphorylinositol.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inositol phosphosphingolipid phospholipase activity","termid":"GO:0052712"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01219":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0003824","GO:0016788"],"is_obsolete":false,"name":"inositol phosphorylceramide phospholipase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0052713","terms_by_termid":{"GO:0052714":null}}


id: PBO:0081932
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Zn regulated GTPase metalloprotein activator 1B","termid":"PBO:0081932"}


id: PBO:0005039
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar H+-ATPase assembly protein Vma21 (predicted)","termid":"PBO:0005039"}


id: PBO:0078639
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thyroid hormone receptor interactor 13","termid":"PBO:0078639"}


id: GO:0003746
data:
  {"annotated_genes":["SJAG_02189","SJAG_01851","SJAG_02017","SJAG_02353","SJAG_04157","SJAG_02812","SJAG_05332","SJAG_01438","SJAG_04351","SJAG_03461","SJAG_02738","SJAG_05271","SJAG_02493","SJAG_02180"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[57257,69165,73245,73921,77280,77723,78004,79737,80153,80348,80519,92353,118868,119345],"is_not":false,"summary":null,"term":"GO:0003746"}]},"cv_name":"molecular_function","definition":"Functions in chain elongation during polypeptide synthesis at the ribosome.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"translation factor activity","termid":"GO:0180051"}],"gene_count":14,"genes_by_uniquename":{"SJAG_01438":null,"SJAG_01851":null,"SJAG_02017":null,"SJAG_02180":null,"SJAG_02189":null,"SJAG_02353":null,"SJAG_02493":null,"SJAG_02738":null,"SJAG_02812":null,"SJAG_03461":null,"SJAG_04157":null,"SJAG_04351":null,"SJAG_05271":null,"SJAG_05332":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674"],"is_obsolete":false,"name":"translation elongation factor activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0008182","GO:0008183","Reactome:R-HSA-192704","Reactome:R-HSA-192841"],"termid":"GO:0003746","terms_by_termid":{"GO:0003746":null}}


id: PBO:0053824
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1088","termid":"PBO:0053824"}


id: GO:0008038
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a neuronal cell in a multicellular organism interprets its surroundings.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell recognition","termid":"GO:0008037"},{"relation_name":"part_of","term_name":"neuron development","termid":"GO:0048666"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuron recognition","synonyms":[{"name":"neuronal cell recognition","type":"exact"}],"termid":"GO:0008038"}


id: MONDO:0700277
data:
  {"annotated_genes":["SJAG_00637"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87473],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030677"},{"annotations":[85895],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013722"}]},"cv_name":"mondo","definition":"Disorder in which the cause of disease is a variation in the POLR3B gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00637":null},"genotype_count":0,"is_obsolete":false,"name":"POLR3B-related disorder","references_by_uniquename":{"PB_REF:0000006":null},"termid":"MONDO:0700277","terms_by_termid":{"MONDO:0013722":null,"MONDO:0030677":null},"xrefs":{"Monarch":{"xref_id":"0700277"}}}


id: PBO:0052629
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 6C","termid":"PBO:0052629"}


id: MONDO:0001625
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A ovarian cyst (disease) that involves the corpus luteum.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ovarian cyst","termid":"MONDO:0003282"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"corpus luteum cyst","secondary_identifiers":["ICD10CM:N83.1","UMLS:C0010093","MEDGEN:1142","SCTID:386762009","icd11.foundation:753201214","DOID:13050","ICD9:620.1"],"synonyms":[{"name":"corpus luteum ovarian cyst (disease)","type":"exact"},{"name":"ovarian cyst (disease) of corpus luteum","type":"exact"}],"termid":"MONDO:0001625","xrefs":{"Monarch":{"xref_id":"0001625"}}}


id: MOD:01527
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  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A distinct molecular entity produced from a particular amino acid residue as the result of a fragmentation process.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reporter fragment","termid":"MOD:01519"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"residue reporter fragment","termid":"MOD:01527"}


id: PBO:0045302
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNM3 intronic transcript 1","termid":"PBO:0045302"}


id: PBO:0041736
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CaM kinase like vesicle associated","termid":"PBO:0041736"}


id: PBO:0071816
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S2 pseudogene 11","termid":"PBO:0071816"}


id: MONDO:0016940
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Chromosome 3p duplication is a chromosome abnormality that occurs when there is an extra copy of genetic material on the short arm (p) of chromosome 3. The severity of the condition and the signs and symptoms depend on the size and location of the duplication and which genes are involved. Features that often occur in people with chromosome 3p duplication include developmental delay, intellectual disability, behavioral problems and distinctive facial features. Chromosome 3p duplication can be de novo or inherited from a parent with a balanced translocation. Treatment is based on the signs and symptoms present in each person.","definition_xrefs":["GARD:0005343"],"direct_ancestors":[{"relation_name":"is_a","term_name":"partial duplication of chromosome 3","termid":"MONDO:0016923"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"partial duplication of the short arm of chromosome 3","secondary_identifiers":["MEDGEN:1826042","Orphanet:262707","icd11.foundation:514472294","GARD:5343","UMLS:C5679720","MESH:C536811"],"synonyms":[{"name":"3p duplication","type":"related"},{"name":"3p trisomy","type":"related"},{"name":"Duplication 3p","type":"related"},{"name":"chromosome 3p duplication","type":"related"},{"name":"partial duplication of chromosome 3p","type":"exact"},{"name":"partial duplication of the short arm of chromosome type 3","type":"exact"},{"name":"partial trisomy 3p","type":"related"},{"name":"partial trisomy of chromosome 3p","type":"exact"},{"name":"partial trisomy of the short arm of chromosome 3","type":"exact"},{"name":"trisomy 3p","type":"related"}],"termid":"MONDO:0016940","xrefs":{"Monarch":{"xref_id":"0016940"}}}


id: PBO:0111860
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calponin homology (CH) domain","termid":"PBO:0111860"}


id: PBO:0061623
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nudix hydrolase 7","termid":"PBO:0061623"}


id: PBO:0079555
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin A-52 residue ribosomal protein fusion product 1 pseudogene 8","termid":"PBO:0079555"}


id: PBO:0027266
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-two_cell_divisions_prior_to_cell_cycle_arrest_in_mitotic_G1_phase_in_response_to_pheromone","termid":"PBO:0027266"}


id: PBO:0066204
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein 18","termid":"PBO:0066204"}


id: MONDO:0017909
data:
  {"annotated_genes":["SJAG_01351"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86150],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009947"},{"annotations":[86579],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009284"}]},"cv_name":"mondo","definition":"Glutathione synthetase deficiency is characterized by hemolytic anemia, associated with metabolic acidosis and 5-oxoprolinuria in moderate forms, and with progressive neurological symptoms and recurrent bacterial infections in the most severe forms.","definition_xrefs":["Orphanet:32"],"direct_ancestors":[{"relation_name":"is_a","term_name":"defective phagocytic cell engulfment","termid":"MONDO:0024626"},{"relation_name":"is_a","term_name":"inherited glutathione metabolism disease","termid":"MONDO:0040566"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01351":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0019241"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0019241","MONDO:0005046"],"is_obsolete":false,"name":"inherited glutathione synthetase deficiency","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:10047","MESH:C536835","NCIT:C128193","SCTID:234589002","DOID:0080699"],"synonyms":[{"name":"5-oxoprolinuria","type":"exact"},{"name":"GSSD","type":"exact"},{"name":"glutathione synthetase deficiency","type":"exact"},{"name":"inborn error of glutathione synthase activity","type":"exact"},{"name":"inborn glutathione synthase activity disorder","type":"exact"},{"name":"inherited glutathione synthetase deficiency","type":"exact"},{"name":"oxoprolinase deficiency","type":"related"},{"name":"pyroglutamic aciduria","type":"exact"},{"name":"pyroglutamicaciduria","type":"exact"},{"name":"rare inborn error of glutathione synthase activity","type":"exact"}],"termid":"MONDO:0017909","terms_by_termid":{"MONDO:0009284":null,"MONDO:0009947":null},"xrefs":{"Monarch":{"xref_id":"0017909"}}}


id: GO:0039009
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the rectal diverticulum over time, from its formation to the mature structure. The rectal diverticulum is an outgrowth of the cloaca and links the pronephric kidney to the exterior.","definition_xrefs":["GOC:mtg_kidney_jan10","PMID:18226983","PMID:10535314","XAO:0001015"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"pronephros development","termid":"GO:0048793"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"rectal diverticulum development","synonyms":[{"name":"pronephric rectal diverticulum development","type":"exact"}],"termid":"GO:0039009"}


id: PBO:0059244
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L14 pseudogene 1","termid":"PBO:0059244"}


id: PBO:0085060
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Non-essential small GTPase of the Rho/Rac family of Ras-like proteins; involved in the establishment of cell polarity and in microtubule assembly","termid":"PBO:0085060"}


id: PBO:0045326
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dedicator of cytokinesis 5","termid":"PBO:0045326"}


id: PBO:0071144
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L22 pseudogene 7","termid":"PBO:0071144"}


id: PBO:0043809
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"copine 1","termid":"PBO:0043809"}


id: GO:0005768
data:
  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vacuole to which materials ingested by endocytosis are delivered.","definition_xrefs":["ISBN:0198506732","PMID:19696797"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic vesicle","termid":"GO:0031410"},{"relation_name":"part_of","term_name":"endomembrane 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id: GO:1900953
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of 18-methylnonadec-1-ene metabolic process.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of olefin metabolic process","termid":"GO:1900908"},{"relation_name":"regulates","term_name":"18-methylnonadec-1-ene metabolic process","termid":"GO:1900880"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of 18-methylnonadec-1-ene metabolic process","synonyms":[{"name":"regulation of 18-methylnonadec-1-ene metabolism","type":"exact"}],"termid":"GO:1900953"}


id: GO:0036463
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with the ligand TRAIL (tumor necrosis factor-related apoptosis-inducing ligand) and transmitting the signal from one side of the plasma membrane to the other to initiate apoptotic cell death.","definition_xrefs":["GOC:bf","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"death receptor activity","termid":"GO:0005035"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"TRAIL receptor activity","synonyms":[{"name":"tumor necrosis factor-related apoptosis-inducing ligand receptor","type":"exact"}],"termid":"GO:0036463"}


id: GO:1901400
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of transforming growth factor beta3 activation.","definition_xrefs":["GOC:sl","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transforming growth factor beta3 activation (obsolete GO:1901400)","synonyms":[{"name":"activation of TGF-beta 3 activation","type":"exact"},{"name":"activation of TGFB3 activation","type":"exact"},{"name":"activation of TGFbeta 3 activation","type":"exact"},{"name":"activation of transforming growth factor beta3 activation","type":"narrow"},{"name":"positive regulation of TGF-beta 3 activation","type":"exact"},{"name":"positive regulation of TGFB3 activation","type":"exact"},{"name":"positive regulation of TGFbeta 3 activation","type":"exact"},{"name":"up regulation of TGF-beta 3 activation","type":"exact"},{"name":"up regulation of TGFB3 activation","type":"exact"},{"name":"up regulation of TGFbeta 3 activation","type":"exact"},{"name":"up regulation of transforming growth factor beta3 activation","type":"exact"},{"name":"up-regulation of TGF-beta 3 activation","type":"exact"},{"name":"up-regulation of TGFB3 activation","type":"exact"},{"name":"up-regulation of TGFbeta 3 activation","type":"exact"},{"name":"up-regulation of transforming growth factor beta3 activation","type":"exact"},{"name":"upregulation of TGF-beta 3 activation","type":"exact"},{"name":"upregulation of TGFB3 activation","type":"exact"},{"name":"upregulation of TGFbeta 3 activation","type":"exact"},{"name":"upregulation of transforming growth factor beta3 activation","type":"exact"}],"termid":"GO:1901400"}


id: PBO:0051246
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable (II)-74-1 (pseudogene)","termid":"PBO:0051246"}


id: PR:000027623
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A CDC14-type phosphatase that is a translation product of the Schizosaccharomyces pombe 972h- clp1 gene or a 1:1 ortholog thereof.","definition_xrefs":["PRO:CNA","PMID:16085489","PMID:18951025"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tyrosine-protein phosphatase Clp1","synonyms":[{"name":"CDC14","type":"related"},{"name":"clp1","type":"exact"},{"name":"tyrosine-protein phosphatase CDC14","type":"exact"}],"termid":"PR:000027623"}


id: MONDO:0006578
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplastic process characterized by a diffuse poorly circumscribed overgrowth of adipose tissue in the mediastinum.","definition_xrefs":["NCIT:C27488"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipomatosis","termid":"MONDO:0006574"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediastinal lipomatosis","secondary_identifiers":["MEDGEN:233682","EFO:1000732","DOID:3926","UMLS:C1334662"],"synonyms":[{"name":"mediastinal lipomatosis","type":"exact"}],"termid":"MONDO:0006578","xrefs":{"Monarch":{"xref_id":"0006578"}}}


id: PBO:0053857
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1127","termid":"PBO:0053857"}


id: GO:0002847
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of T cell tolerance induction to tumor cell.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of T cell mediated immune response to tumor cell","termid":"GO:0002841"},{"relation_name":"is_a","term_name":"negative regulation of tolerance induction to tumor cell","termid":"GO:0002844"},{"relation_name":"is_a","term_name":"regulation of T cell tolerance induction to tumor cell","termid":"GO:0002846"},{"relation_name":"is_a","term_name":"negative regulation of peripheral T cell tolerance induction","termid":"GO:0002850"},{"relation_name":"negatively_regulates","term_name":"T cell tolerance induction to tumor cell","termid":"GO:0002411"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of T cell tolerance induction to tumor cell","synonyms":[{"name":"down regulation of T cell tolerance induction to tumor cell","type":"exact"},{"name":"down-regulation of T cell tolerance induction to tumor cell","type":"exact"},{"name":"downregulation of T cell tolerance induction to tumor cell","type":"exact"},{"name":"inhibition of T cell tolerance induction to tumor cell","type":"narrow"}],"termid":"GO:0002847"}


id: GO:0048569
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Development, taking place during the post-embryonic phase of an animal tissue or tissues that work together to perform a specific function or functions. Development pertains to the process whose specific outcome is the progression of a structure over time, from its formation to the mature structure. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions.","definition_xrefs":["GOC:jid"],"gene_count":0,"genotype_count":0,"name":"obsolete post-embryonic animal organ development (obsolete GO:0048569)","synonyms":[{"name":"post-embryonic animal organogenesis","type":"exact"}],"termid":"GO:0048569"}


id: GO:1903896
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the IRE1-mediated unfolded protein response.","definition_xrefs":["GO_REF:0000058","GOC:PARL","PMID:22013210","GOC:bf","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of endoplasmic reticulum unfolded protein response","termid":"GO:1900103"},{"relation_name":"is_a","term_name":"regulation of IRE1-mediated unfolded protein response","termid":"GO:1903894"},{"relation_name":"positively_regulates","term_name":"IRE1-mediated unfolded protein response","termid":"GO:0036498"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of IRE1-mediated unfolded protein response","synonyms":[{"name":"activation of IRE1 branch of UPR","type":"narrow"},{"name":"activation of IRE1 signaling in response to endoplasmic reticulum stress","type":"related"},{"name":"activation of IRE1-mediated unfolded protein response","type":"narrow"},{"name":"activation of IRE1alpha unfolded protein response","type":"narrow"},{"name":"activation of IRE1p unfolded protein response","type":"narrow"},{"name":"activation of UPR signaling by IRE1 stress sensor","type":"narrow"},{"name":"activation of endoplasmic reticulum unfolded protein response; IRE1 signaling","type":"narrow"},{"name":"activation of inositol-requiring transmembrane kinase/endonuclease signal transduction","type":"related"},{"name":"positive regulation of ERN1-mediated unfolded protein response","type":"related"},{"name":"positive regulation of IRE1 branch of UPR","type":"exact"},{"name":"positive regulation of IRE1 signaling in response to endoplasmic reticulum stress","type":"related"},{"name":"positive regulation of IRE1alpha unfolded protein response","type":"narrow"},{"name":"positive regulation of IRE1p unfolded protein response","type":"narrow"},{"name":"positive regulation of UPR signaling by IRE1 stress sensor","type":"exact"},{"name":"positive regulation of endoplasmic reticulum unfolded protein response; IRE1 signaling","type":"exact"},{"name":"positive regulation of inositol-requiring transmembrane kinase/endonuclease signal transduction","type":"related"},{"name":"up regulation of IRE1 branch of UPR","type":"exact"},{"name":"up regulation of IRE1 signaling in response to endoplasmic reticulum stress","type":"related"},{"name":"up regulation of IRE1-mediated unfolded protein response","type":"exact"},{"name":"up regulation of IRE1alpha unfolded protein response","type":"narrow"},{"name":"up regulation of IRE1p unfolded protein response","type":"narrow"},{"name":"up regulation of UPR signaling by IRE1 stress sensor","type":"exact"},{"name":"up regulation of endoplasmic reticulum unfolded protein response; IRE1 signaling","type":"exact"},{"name":"up regulation of inositol-requiring transmembrane kinase/endonuclease signal transduction","type":"related"},{"name":"up-regulation of IRE1 branch of UPR","type":"exact"},{"name":"up-regulation of IRE1 signaling in response to endoplasmic reticulum stress","type":"related"},{"name":"up-regulation of IRE1-mediated unfolded protein response","type":"exact"},{"name":"up-regulation of IRE1alpha unfolded protein response","type":"narrow"},{"name":"up-regulation of IRE1p unfolded protein response","type":"narrow"},{"name":"up-regulation of UPR signaling by IRE1 stress sensor","type":"exact"},{"name":"up-regulation of endoplasmic reticulum unfolded protein response; IRE1 signaling","type":"exact"},{"name":"up-regulation of inositol-requiring transmembrane kinase/endonuclease signal transduction","type":"related"},{"name":"upregulation of IRE1 branch of UPR","type":"exact"},{"name":"upregulation of IRE1 signaling in response to endoplasmic reticulum stress","type":"related"},{"name":"upregulation of IRE1-mediated unfolded protein response","type":"exact"},{"name":"upregulation of IRE1alpha unfolded protein response","type":"narrow"},{"name":"upregulation of IRE1p unfolded protein response","type":"narrow"},{"name":"upregulation of UPR signaling by IRE1 stress sensor","type":"exact"},{"name":"upregulation of endoplasmic reticulum unfolded protein response; IRE1 signaling","type":"exact"},{"name":"upregulation of inositol-requiring transmembrane kinase/endonuclease signal transduction","type":"related"}],"termid":"GO:1903896"}


id: GO:0018812
data:
  {"annotated_genes":["SJAG_01300"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[61543],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0102158"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a 3-hydroxy-fatty acyl-CoA = a (2E)-enoyl-CoA + H2O.","definition_xrefs":["RHEA:33767"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enoyl-CoA hydratase activity","termid":"GO:0004300"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01300":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"3-hydroxyacyl-CoA dehydratase activity","references_by_uniquename":{"GO_REF:0000003":null},"secondary_identifiers":["Reactome:R-HSA-2066778","Reactome:R-HSA-2066780","Reactome:R-HSA-390252","Reactome:R-HSA-389986","Reactome:R-HSA-8957389","Reactome:R-HSA-5676637","Reactome:R-HSA-6809263"],"termid":"GO:0018812","terms_by_termid":{"GO:0102158":null}}


id: PBO:0076744
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell leukemia translocation altered","termid":"PBO:0076744"}


id: MONDO:0016667
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete sickle cell disease associated with an other hemoglobin anomaly (obsolete MONDO:0016667)","secondary_identifiers":["Orphanet:251355"],"synonyms":[{"name":"Double heterozygotes sickling disorder","type":"exact"}],"termid":"MONDO:0016667","xrefs":{"Monarch":{"xref_id":"0016667"}}}


id: PBO:0000528
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U4/U6 x U5 tri-snRNP complex subunit Snu23 (predicted)","termid":"PBO:0000528"}


id: PR:000050485
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A Ras GTPase-activating-like protein rng2 (Schizosaccharomyces pombe) that has not been phosphorylated at the positions equivalent to Ser-199 and Ser-207 of the amino acid sequence represented by UniProtKB:O14188. Example: UniProtKB:O14188, Ser-199/Ser-207, PR:000026291.","definition_xrefs":["PomBase:VW","PRO:DAN","PMID:33131769"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Ras GTPase-activating-like protein rng2 (Schizosaccharomyces pombe)","termid":"PR:000050483"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rng2/UnPhos(S199,S207)","pombase_gene_id":"SPAC4F8.13c","synonyms":[{"name":"PomBase_original_PRO_term_name: Ras GTPase-activating-like protein rng2 unphosphorylated 1 (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-rng2/UnPhos:1","type":"exact"},{"name":"UniProtKB:O14188, Ser-199/Ser-207, PR:000026291","type":"narrow"},{"name":"rng2/UnPhos(S199,S207)","type":"exact"}],"termid":"PR:000050485"}


id: PBO:0070337
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNY4 pseudogene 9","termid":"PBO:0070337"}


id: MONDO:0002040
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Superficial infections of the skin or its appendages by any of various fungi.","definition_xrefs":["MESH:D003881"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cutaneous mycosis","termid":"MONDO:0000254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dermatomycosis","secondary_identifiers":["ICD9:111","DOID:1563","MEDGEN:8330","ICD9:111.9","SCTID:47382004","UMLS:C0011630"],"termid":"MONDO:0002040","xrefs":{"Monarch":{"xref_id":"0002040"}}}


id: GO:0031584
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that initiates the activity of inactive phospholipase D.","definition_xrefs":["GOC:tb","GOC:dph","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of phospholipase activity","termid":"GO:0010518"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"activation of phospholipase D activity","termid":"GO:0031584"}


id: PBO:0111058
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein, Human BICC1 ortholog, implicated in RNA metabolism","termid":"PBO:0111058"}


id: MONDO:0011798
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypoprebetalipoproteinemia, acanthocytosis, retinitis pigmentosa, and pallidal degeneration","secondary_identifiers":["MESH:C564603","UMLS:C1846582","Orphanet:157855","OMIM:607236","MEDGEN:337612"],"synonyms":[{"name":"harp syndrome","type":"related"},{"name":"hypoprebetalipoproteinemia, acanthocytosis, retinitis pigmentosa, and pallidal degeneration","type":"exact"}],"termid":"MONDO:0011798","xrefs":{"Monarch":{"xref_id":"0011798"}}}


id: PR:Q10152
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC1D4.07c gene.","definition_xrefs":["UniProtKB:Q10152","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1D4.07c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1D4.07c","synonyms":[{"name":"Spom972h-SPAC1D4.07c","type":"exact"}],"termid":"PR:Q10152"}


id: PBO:0045602
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox 4 like 13 (pseudogene)","termid":"PBO:0045602"}


id: FYECO:0000173
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which zinc chloride was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ ZnCl2","synonyms":[{"name":"zinc chloride added","type":"exact"}],"termid":"FYECO:0000173"}


id: MONDO:0015901
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare inherited hyperlipidemia (obsolete MONDO:0015901)","secondary_identifiers":["ICD9:272.4","Orphanet:181422","ICD10CM:E78.5"],"synonyms":[{"name":"rare hyperlipidemia","type":"related"}],"termid":"MONDO:0015901","xrefs":{"Monarch":{"xref_id":"0015901"}}}


id: PBO:0086157
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for processing of 20S pre-rRNA in the cytoplasm; associates with pre-40S ribosomal particles; inhibits the premature association of 60S subunits with assembling 40S subunits in the cytoplasm; similar to Bms1p; relocalizes from nucleus to cytoplasm upon DNA replication stress","termid":"PBO:0086157"}


id: MONDO:0030330
data:
  {"annotated_genes":["SJAG_00930"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86705],"is_not":false,"summary":null,"term":"MONDO:0030330"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial restrictive cardiomyopathy","termid":"MONDO:0016340"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00930":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"cardiomyopathy, familial restrictive, 6","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1780781","OMIM:619433","UMLS:C5543638"],"synonyms":[{"name":"RCM6","type":"exact"},{"name":"cardiomyopathy, familial restrictive, 6","type":"exact"}],"termid":"MONDO:0030330","terms_by_termid":{"MONDO:0030330":null},"xrefs":{"Monarch":{"xref_id":"0030330"}}}


id: PR:000036914
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A serine/threonine-protein kinase gad8 that is encoded in the genome of Schizosaccharomyces pombe.","definition_xrefs":["PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine-protein kinase gad8 (Schizosaccharomyces pombe)","pombase_gene_id":"SPCC24B10.07","synonyms":[{"name":"Spom-gad8","type":"exact"}],"termid":"PR:000036914"}


id: GO:1990837
data:
  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id: GO:1901739
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of myoblast fusion.","definition_xrefs":["GOC:BHF","GOC:TermGenie","GOC:rl","PMID:21364645"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of syncytium formation by plasma membrane fusion","termid":"GO:0060142"},{"relation_name":"regulates","term_name":"myoblast fusion","termid":"GO:0007520"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of myoblast fusion","termid":"GO:1901739"}


id: PBO:0034375
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  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-does_not_overlap_sequence_of","termid":"PBO:0034375"}


id: PATO:0001882
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  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A concave 3-D shape quality inhering in a bearer by virtue of the bearer's resembling a slug.","definition_xrefs":["PATOC:CJM"],"direct_ancestors":[{"relation_name":"is_a","term_name":"concave 3-D shape","termid":"PATO:0002008"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"limaciform","termid":"PATO:0001882"}


id: PBO:0088312
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi galactosylxylosylprotein 3-beta-galactosyltransferase Pvg3","termid":"PBO:0088312"}


id: PBO:0066011
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RALY RNA binding protein like","termid":"PBO:0066011"}


id: PBO:0035804
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  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_histone_H3-K9_trimethylation_during_vegetative_growth","termid":"PBO:0035804"}


id: GO:0035478
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  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a chylomicron, a large lipoprotein particle (diameter 75-1200 nm) composed of a central core of triglycerides and cholesterol surrounded by a protein-phospholipid coating. The proteins include one molecule of apolipoprotein B-48 and may include a variety of apolipoproteins, including APOAs, APOCs and APOE.","definition_xrefs":["GOC:BHF","PMID:17403372"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipoprotein particle binding","termid":"GO:0071813"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"chylomicron binding","termid":"GO:0035478"}


id: GO:0005917
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  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A specialized cell-cell junction found between nephrocytes of the insect kidney, which is adapted for filtration of hemolymph. The insect nephrocyte is anatomically and functionally similar to the glomerular podocyte of vertebrates.","definition_xrefs":["GOC:mtg_kidney_jan10","GOC:sart","PMID:18971929"],"direct_ancestors":[{"relation_name":"is_a","term_name":"filtration diaphragm","termid":"GO:0036056"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"nephrocyte diaphragm","synonyms":[{"name":"nephrocyte junction","type":"related"}],"termid":"GO:0005917"}


id: PBO:0051673
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inhibitor of growth family member 3","termid":"PBO:0051673"}


id: GO:0055118
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of cardiac muscle contraction.","definition_xrefs":["GOC:ecd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of heart contraction","termid":"GO:0045822"},{"relation_name":"is_a","term_name":"negative regulation of striated muscle contraction","termid":"GO:0045988"},{"relation_name":"is_a","term_name":"regulation of cardiac muscle contraction","termid":"GO:0055117"},{"relation_name":"negatively_regulates","term_name":"cardiac muscle contraction","termid":"GO:0060048"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cardiac muscle contraction","termid":"GO:0055118"}


id: MONDO:0019505
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Hypomyelination-hypogonadotropic hypogonadism-hypodontia syndrome is characterized by the association of demyelinating leukodystrophy with progressive cerebellar ataxia, hypogonadotropic hypogonadism and hypodontia.","definition_xrefs":["Orphanet:88637"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"leukodystrophy, hypomyelinating, 7, with or without oligodontia and/or hypogonadotropic hypogonadism","termid":"MONDO:0011897"}],"gene_count":0,"genotype_count":0,"name":"obsolete hypomyelination-hypogonadotropic hypogonadism-hypodontia syndrome (obsolete MONDO:0019505)","synonyms":[{"name":"4H syndrome","type":"exact"}],"termid":"MONDO:0019505","xrefs":{"Monarch":{"xref_id":"0019505"}}}


id: PBO:0066711
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 8","termid":"PBO:0066711"}


id: PBO:0050136
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 1 pseudogene 46","termid":"PBO:0050136"}


id: PBO:0075123
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 173","termid":"PBO:0075123"}


id: PBO:0055554
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2990","termid":"PBO:0055554"}


id: PBO:0050132
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 1 pseudogene 42","termid":"PBO:0050132"}


id: FYPO:0001492
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  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetative cell is viable and longer than normal, and has a greater length:diameter ratio than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"elongated vegetative cell","termid":"FYPO:0001122"},{"relation_name":"is_a","term_name":"elongated vegetative cell","termid":"FYPO:0001122"},{"relation_name":"is_a","term_name":"viable vegetative cell with abnormal cell shape","termid":"FYPO:0002197"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000004"}],"interesting_parent_ids":["FYPO:0000004","FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0000005"],"is_obsolete":false,"name":"viable elongated vegetative cell","synonyms":[{"name":"elongated viable vegetative cell","type":"exact"},{"name":"viable elongated cell during vegetative growth","type":"exact"},{"name":"viable elongated vegetative cell during mitotic cell cycle","type":"related"}],"termid":"FYPO:0001492"}


id: PBO:0088399
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L14","termid":"PBO:0088399"}


id: PBO:0056085
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lymphocyte antigen 86","termid":"PBO:0056085"}


id: GO:0033818
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  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + malonyl-[acyl-carrier protein] = acetoacyl-[acyl-carrier protein] + CoA + CO2.","definition_xrefs":["EC:2.3.1.180"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016746","GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"beta-ketoacyl-acyl-carrier-protein synthase III activity","secondary_identifiers":["RHEA:12080","MetaCyc:2.3.1.180-RXN"],"synonyms":[{"name":"3-ketoacyl-acyl carrier protein synthase III activity","type":"related"},{"name":"3-oxoacyl:ACP synthase III activity","type":"related"},{"name":"FabH","type":"related"},{"name":"KAS III","type":"related"},{"name":"KASIII","type":"related"},{"name":"acetyl-CoA:malonyl-acyl-carrier-protein C-acyltransferase activity","type":"related"},{"name":"beta-ketoacyl (acyl carrier protein) synthase III activity","type":"related"},{"name":"beta-ketoacyl-ACP synthase III activity","type":"related"},{"name":"beta-ketoacyl-acyl carrier protein synthase III activity","type":"related"}],"termid":"GO:0033818"}


id: MONDO:0004134
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"skin neoplasm","termid":"MONDO:0002531"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"benign dermal neurilemmoma","secondary_identifiers":["MEDGEN:231931","DOID:7181","NCIT:C5569","UMLS:C1332490"],"synonyms":[{"name":"benign dermal schwannoma","type":"exact"},{"name":"benign neurilemmoma of skin","type":"exact"},{"name":"benign neurilemmoma of the skin","type":"exact"},{"name":"benign schwannoma of skin","type":"exact"},{"name":"benign schwannoma of the skin","type":"exact"},{"name":"benign skin neurilemmoma","type":"exact"},{"name":"benign skin schwannoma","type":"exact"}],"termid":"MONDO:0004134","xrefs":{"Monarch":{"xref_id":"0004134"}}}


id: PBO:0071076
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 78","termid":"PBO:0071076"}


id: PBO:0057180
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 331","termid":"PBO:0057180"}


id: SO:0005837
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The primary transcript of an evolutionarily conserved eukaryotic low molecular weight RNA capable of intermolecular hybridization with both homologous and heterologous 18S rRNA.","definition_xrefs":["PMID:2251119"],"direct_ancestors":[{"relation_name":"is_a","term_name":"snoRNA_primary_transcript","termid":"SO:0000232"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U14_snoRNA_primary_transcript","synonyms":[{"name":"4.5S snRNA primary transcript","type":"exact"},{"name":"U14 snoRNA primary transcript","type":"exact"}],"termid":"SO:0005837"}


id: PR:000027583
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  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A meiosis protein mei2 unmodified form in Schizosaccharomyces pombe.","definition_xrefs":["PMID:9062192","PomBase:MAH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiosis protein mei2","termid":"PR:000027567"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mei2/UnMod","pombase_gene_id":"SPAC27D7.03c","synonyms":[{"name":"PomBase_original_PRO_term_name: meiosis protein mei2 unmodified form (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-mei2/UnMod","type":"exact"},{"name":"mei2/UnMod","type":"exact"}],"termid":"PR:000027583"}


id: GO:0075016
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a swollen, flattened portion of a symbiont filament is formed on or near its host organism, to adhere to and for the purpose of penetrating the host surface.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"formation of infection structure","termid":"GO:0075015"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"appressorium formation","synonyms":[{"name":"appressorium formation for entry into host, on or near host","type":"exact"},{"name":"appressorium formation on or near host","type":"related"},{"name":"formation of an appressorium by symbiont on or near host","type":"exact"}],"termid":"GO:0075016"}


id: PBO:0050496
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homeobox B6","termid":"PBO:0050496"}


id: PBO:0057325
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 519e","termid":"PBO:0057325"}


id: PBO:0090398
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein phosphatase PP2C catalytic subunit Ptc3","termid":"PBO:0090398"}


id: GO:0007140
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A cell cycle process by which the cell nucleus divides as part of a meiotic cell cycle in the male germline.","definition_xrefs":["GOC:mah","GOC:vw","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic nuclear division","termid":"GO:0140013"},{"relation_name":"part_of","term_name":"male gamete generation","termid":"GO:0048232"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0140013"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150","GO:0140013"],"is_obsolete":false,"name":"male meiotic nuclear division","synonyms":[{"name":"male meiosis","type":"related"},{"name":"male nuclear division","type":"broad"}],"termid":"GO:0007140"}


id: PBO:0071009
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 11","termid":"PBO:0071009"}


id: PBO:0113451
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of EGO/GSE complex; vacuolar/endosomal membrane-associated EGO/GSE complex regulates exit from rapamycin-induced growth arrest, stimulating microautophagy and sorting of Gap1p from endosome to plasma membrane; essential for integrity and function of EGO; targeted to vacuole via AP-3 pathway; gene exhibits synthetic genetic interaction with MSS4","termid":"PBO:0113451"}


id: MOD:01362
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-serine residue to O-thiophospho-L-serine.","definition_xrefs":["PubMed:12110917","Unimod:260#S","PubMed:11507762"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thiophosphorylated residue","termid":"MOD:00583"},{"relation_name":"is_a","term_name":"modified L-serine residue","termid":"MOD:00916"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-thiophospho-L-serine","synonyms":[{"name":"Thiophospho","type":"related"},{"name":"Thiophosphorylation","type":"related"}],"termid":"MOD:01362"}


id: GO:0001098
data:
  {"annotated_genes":["SJAG_00095","SJAG_00139","SJAG_03118","SJAG_01610","SJAG_04353","SJAG_00483","SJAG_00448","SJAG_01151","SJAG_02037","SJAG_00159","SJAG_04933"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[65340],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0099122"},{"annotations":[72916,78442],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990269"},{"annotations":[79000,76599,79011,72611,71397,57531],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000993"},{"annotations":[79519],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001096"},{"annotations":[76571],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001097"}]},"cv_name":"molecular_function","definition":"Binding to a component of the basal transcription machinery which is composed of the RNA polymerase core enzyme and the basal transcription factor(s), the minimal set of factors required for formation of the preinitiation complex (PIC) by the RNA polymerase.","definition_xrefs":["GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00095":null,"SJAG_00139":null,"SJAG_00159":null,"SJAG_00448":null,"SJAG_00483":null,"SJAG_01151":null,"SJAG_01610":null,"SJAG_02037":null,"SJAG_03118":null,"SJAG_04353":null,"SJAG_04933":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"basal transcription machinery binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null},"termid":"GO:0001098","terms_by_termid":{"GO:0000993":null,"GO:0001096":null,"GO:0001097":null,"GO:0099122":null,"GO:1990269":null}}


id: PBO:0002196
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thymidylate synthase (predicted)","termid":"PBO:0002196"}


id: PBO:0044072
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CSTB pseudogene 1","termid":"PBO:0044072"}


id: PBO:0048560
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GDNF family receptor alpha like","termid":"PBO:0048560"}


id: MONDO:0030785
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive non-syndromic intellectual disability","termid":"MONDO:0019502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005066","MONDO:0037792"],"is_obsolete":false,"name":"intellectual developmental disorder, autosomal recessive 75, with neuropsychiatric features and variant lissencephaly","secondary_identifiers":["OMIM:619827","UMLS:C5676961","MEDGEN:1808159","DOID:0081234"],"synonyms":[{"name":"MRT75","type":"exact"},{"name":"intellectual developmental disorder, autosomal recessive 75, with neuropsychiatric features and variant lissencephaly","type":"exact"}],"termid":"MONDO:0030785","xrefs":{"Monarch":{"xref_id":"0030785"}}}


id: PBO:0113048
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Chromosome linkage inner nuclear membrane protein; CLIP, involved in perinuclear chromosome tethering and rDNA repeat stability; involved in regulating mitotic exit; dephosphorylated by Cdc14p in anaphase, which promotes timely rDNA segregation and allows mitotic progression; interacts with Csm1p and Lrs4p; null mutant has elevated levels of unequal sister-chromatid exchange; GFP-fusion protein localizes to the nuclear periphery; Cdc28p substrate","termid":"PBO:0113048"}


id: MONDO:0002967
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Dermatophytosis involving the stratum corneum of the skin of the scalp and beard area.","definition_xrefs":["NCIT:C34536"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dermatophytosis","termid":"MONDO:0004678"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"dermatophytosis of scalp or beard","secondary_identifiers":["DOID:4337","SCTID:266148000","UMLS:C0011640","MEDGEN:4237","ICD9:110.0"],"synonyms":[{"name":"Trichophyton rubrum tinea capitis","type":"exact"},{"name":"dermatophytosis of scalp","type":"related"},{"name":"dermatophytosis of scalp and beard","type":"exact"},{"name":"scalp dermatophytosis","type":"exact"},{"name":"scalp ringworm","type":"exact"},{"name":"tinea capitis","type":"related"},{"name":"tinea capitis due to Trichophyton rubrum","type":"exact"}],"termid":"MONDO:0002967","xrefs":{"Monarch":{"xref_id":"0002967"}}}


id: PBO:0003200
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homocysteine synthase Met17","termid":"PBO:0003200"}


id: PBO:0066739
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 36","termid":"PBO:0066739"}


id: GO:2000227
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of pancreatic A cell differentiation.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of epithelial cell differentiation","termid":"GO:0030857"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"regulation of pancreatic A cell differentiation","termid":"GO:2000226"},{"relation_name":"negatively_regulates","term_name":"pancreatic A cell differentiation","termid":"GO:0003310"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of pancreatic A cell differentiation","synonyms":[{"name":"negative regulation of pancreatic alpha cell differentiation","type":"exact"}],"termid":"GO:2000227"}


id: GO:0140539
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of melanotic encapsulation of foreign target.","definition_xrefs":["PMID:18457993","PMID:15749104"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of immune effector process","termid":"GO:0002697"},{"relation_name":"is_a","term_name":"regulation of melanization defense response","termid":"GO:0035007"},{"relation_name":"regulates","term_name":"melanotic encapsulation of foreign target","termid":"GO:0035011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"regulation of melanotic encapsulation of foreign target","termid":"GO:0140539"}


id: PBO:0067095
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 132, pseudogene","termid":"PBO:0067095"}


id: FYPO:0008392
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of histone H4 measured in the cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PMID:39878217"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein level during vegetative growth","termid":"FYPO:0000833"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0001312","FYPO:0001320"],"is_obsolete":false,"name":"normal level of histone H4 in cell","termid":"FYPO:0008392"}


id: GO:0000059
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A protein complex assembly process that contributes to protein import into the nucleus, and that results in the association of a cargo protein, a carrier protein such as an importin alpha/beta heterodimer, and a nucleoporin located at the periphery of the nuclear pore complex.","definition_xrefs":["PMID:14570049","GOC:isa_complete","PMID:7878057","GOC:mah","PMID:9126736"],"gene_count":0,"genotype_count":0,"name":"obsolete protein import into nucleus, docking (obsolete GO:0000059)","synonyms":[{"name":"protein docking during protein import into nucleus","type":"exact"},{"name":"protein docking during protein transport from cytoplasm to nucleus","type":"exact"},{"name":"protein docking during protein-nucleus import","type":"exact"},{"name":"protein transport from cytoplasm to nucleus, docking","type":"exact"},{"name":"protein-nucleus import, docking","type":"exact"}],"termid":"GO:0000059"}


id: GO:0009694
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving jasmonic acid, a fatty acid derivative with the formula (1R-(1 alpha, 2 beta(Z)))-3-oxo-2-(2-pentenyl)cyclopentaneacetic acid.","definition_xrefs":["ISBN:0387969845"],"direct_ancestors":[{"relation_name":"is_a","term_name":"long-chain fatty acid metabolic process","termid":"GO:0001676"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006629","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"jasmonic acid metabolic process","synonyms":[{"name":"jasmonic acid metabolism","type":"exact"}],"termid":"GO:0009694"}


id: GO:0044769
data:
  {"annotated_genes":["SJAG_00516","SJAG_04955","SJAG_02782","SJAG_01817","SJAG_05294","SJAG_01447","SJAG_00212","SJAG_02023","SJAG_01397","SJAG_01471","SJAG_04015","SJAG_00136","SJAG_01913","SJAG_03406"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[58435,60785,79976,61317,61640,65681,68135,71616,78816,62819,60676,65041,78878,62042],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046961"}]},"cv_name":"molecular_function","definition":"Enables the transfer of ions from one side of a membrane to the other according to the reaction: ATP + H2O + ion(in) = ADP + phosphate + ion(out), by a rotational mechanism.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ATPase-coupled ion transmembrane transporter activity","termid":"GO:0042625"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00136":null,"SJAG_00212":null,"SJAG_00516":null,"SJAG_01397":null,"SJAG_01447":null,"SJAG_01471":null,"SJAG_01817":null,"SJAG_01913":null,"SJAG_02023":null,"SJAG_02782":null,"SJAG_03406":null,"SJAG_04015":null,"SJAG_04955":null,"SJAG_05294":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"ATPase activity, coupled to transmembrane movement of ions, rotational mechanism","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null},"termid":"GO:0044769","terms_by_termid":{"GO:0046961":null}}


id: PBO:0026832
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_level_at_mating_type_region","termid":"PBO:0026832"}


id: PBO:0046328
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ENOPH1 pseudogene 1","termid":"PBO:0046328"}


id: GO:0045305
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Functions to either promote or inhibit the establishment of competence for transformation.","definition_xrefs":["GOC:mlg"],"gene_count":0,"genotype_count":0,"name":"obsolete regulator of establishment of competence for transformation activity (obsolete GO:0045305)","synonyms":[{"name":"regulator of establishment of competence for transformation activity","type":"exact"}],"termid":"GO:0045305"}


id: GO:0061479
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a reverse transcriptase inhibitor stimulus.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to antibiotic","termid":"GO:0046677"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to reverse transcriptase inhibitor","termid":"GO:0061479"}


id: GO:0008161
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete carbamate resistance (obsolete GO:0008161)","synonyms":[{"name":"carbamate resistance","type":"exact"}],"termid":"GO:0008161"}


id: FYPO:0006896
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of mitochondria to the cell tip is decreased during one or both meiotic nuclear divisions.","definition_xrefs":["PomBase:mah","PMID:30649994"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization during meiosis","termid":"FYPO:0003549"},{"relation_name":"is_a","term_name":"abnormal protein localization to cell tip","termid":"FYPO:0005987"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000138","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"decreased mitochondrion localization to cell tip during meiosis","synonyms":[{"name":"decreased mitochondrial localization to cell tip during meiosis","type":"exact"},{"name":"decreased mitochondrion localisation to cell tip during meiosis","type":"exact"},{"name":"decreased mitochondrion localization to cell end during meiosis","type":"exact"},{"name":"decreased mitochondrion localization to cell tip during meiotic nuclear division","type":"exact"},{"name":"reduced mitochondrion localization to cell tip during meiosis","type":"exact"}],"termid":"FYPO:0006896"}


id: MONDO:0004709
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm involving a occipital lobe.","definition_xrefs":["MONDO:patterns/neoplasm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neoplasm of cerebral hemisphere","termid":"MONDO:0021374"},{"relation_name":"is_a","term_name":"cerebral cortex disorder","termid":"MONDO:0044996"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"occipital lobe neoplasm","secondary_identifiers":["DOID:910","ICD10CM:C71.4","UMLS:C1263889","SCTID:126957005","MEDGEN:220389","ICD9:191.4","NCIT:C5574"],"synonyms":[{"name":"malignant neoplasm of occipital lobe","type":"exact"},{"name":"neoplasm of occipital lobe","type":"exact"},{"name":"neoplasm of the occipital lobe","type":"exact"},{"name":"occipital lobe neoplasm","type":"exact"},{"name":"occipital lobe neoplasm (disease)","type":"exact"},{"name":"occipital lobe tumor","type":"exact"},{"name":"occipital lobe tumour","type":"exact"},{"name":"tumor of occipital lobe","type":"exact"},{"name":"tumor of the occipital lobe","type":"exact"},{"name":"tumour of occipital lobe","type":"exact"},{"name":"tumour of the occipital lobe","type":"exact"}],"termid":"MONDO:0004709","xrefs":{"Monarch":{"xref_id":"0004709"}}}


id: PBO:0078123
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha variable 8-5 (pseudogene)","termid":"PBO:0078123"}


id: PBO:0060652
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NCOR1 pseudogene 1","termid":"PBO:0060652"}


id: GO:0160183
data:
  {"annotated_genes":["SJAG_04991","SJAG_01073","SJAG_00079","SJAG_03435"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[99761],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140506"},{"annotations":[60779,90333,114919],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140580"}]},"cv_name":"molecular_function","definition":"The binding activity of a molecule that brings together a target membrane and an autophagosome during autophagy.","definition_xrefs":["PMID:36635405","PMID:30544615"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane-membrane adaptor activity","termid":"GO:0043495"},{"relation_name":"is_a","term_name":"autophagy cargo adaptor activity","termid":"GO:0160247"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00079":null,"SJAG_01073":null,"SJAG_03435":null,"SJAG_04991":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0030674"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0060090","GO:0003674","GO:0030674"],"is_obsolete":false,"name":"autophagosome-membrane adaptor activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null},"termid":"GO:0160183","terms_by_termid":{"GO:0140506":null,"GO:0140580":null}}


id: FYPO:0003710
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a cell is shaped in the form of a pear, and has a larger volume than normal, in the vegetative growth phase of the life cycle. One end is rounded, while the other resembles an end of a normal rod-shaped cell. The normally shaped end has the same diameter as a wild-type cell.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pear-shaped vegetative cell","termid":"FYPO:0001120"},{"relation_name":"is_a","term_name":"elongated vegetative cell","termid":"FYPO:0001122"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000005","FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"swollen pear-shaped vegetative cell","synonyms":[{"name":"swollen ice cream cone-shaped cell during vegetative growth","type":"exact"},{"name":"swollen pear-shaped cell during vegetative growth","type":"exact"},{"name":"swollen pear-shaped vegetative cell during mitotic cell cycle","type":"related"}],"termid":"FYPO:0003710"}


id: PBO:0059272
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L35 pseudogene 1","termid":"PBO:0059272"}


id: PATO:0002075
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An avidity which is relatively low.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"avidity","termid":"PATO:0002073"},{"relation_name":"is_a","term_name":"decreased object quality","termid":"PATO:0002303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased avidity","termid":"PATO:0002075"}


id: PBO:0056400
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microtubule associated protein tau","termid":"PBO:0056400"}


id: FYPO:0007001
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which histone exchange occurs to a normal (i.e. indistinguishable from wild type) extent in regions of pericentric heterochromatin. Histone exchange is replacement, within chromatin, of resident histones or histone subunits with alternative, sometimes variant, histones or subunits.","definition_xrefs":["PomBase:mah","GO:0043486","PMID:26518661","GO:0005721"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal dynamic protein localization pattern","termid":"FYPO:0006999"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000138","FYPO:0001312","FYPO:0000257"],"is_obsolete":false,"name":"normal histone exchange at pericentric heterochromatin","synonyms":[{"name":"normal histone exchange at centromeric heterochromatin","type":"exact"},{"name":"normal histone exchange at dh repeat","type":"narrow"},{"name":"normal histone exchange at pericentric heterochromatin during mitotic cell cycle","type":"related"},{"name":"normal histone exchange at pericentric heterochromatin during vegetative growth","type":"exact"}],"termid":"FYPO:0007001"}


id: GO:1902930
data:
  {"annotated_genes":["SJAG_02104","SJAG_04018","SJAG_03538","SJAG_01307","SJAG_02406","SJAG_02044"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94246],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010895"},{"annotations":[110230],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070452"},{"annotations":[89399,114065],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090180"},{"annotations":[75915],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045540"},{"annotations":[88924,106212],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032443"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of alcohol biosynthetic process.","definition_xrefs":["GOC:TermGenie","PMID:23332010","GOC:mengo_curators","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of biosynthetic process","termid":"GO:0009889"},{"relation_name":"is_a","term_name":"regulation of small molecule metabolic process","termid":"GO:0062012"},{"relation_name":"regulates","term_name":"alcohol biosynthetic process","termid":"GO:0046165"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01307":null,"SJAG_02044":null,"SJAG_02104":null,"SJAG_02406":null,"SJAG_03538":null,"SJAG_04018":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"regulation of alcohol biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"regulation of alcohol anabolism","type":"exact"},{"name":"regulation of alcohol biosynthesis","type":"exact"},{"name":"regulation of alcohol formation","type":"exact"},{"name":"regulation of alcohol synthesis","type":"exact"},{"name":"regulation of solventogenesis","type":"broad"}],"termid":"GO:1902930","terms_by_termid":{"GO:0010895":null,"GO:0032443":null,"GO:0045540":null,"GO:0070452":null,"GO:0090180":null}}


id: PBO:0064583
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POTE ankyrin domain family member D","termid":"PBO:0064583"}


id: MONDO:0850030
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hemimelia","termid":"MONDO:0016240"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"complete hemimelia","secondary_identifiers":["MEDGEN:1863414","Orphanet:498491","GARD:22033","UMLS:C5925041"],"termid":"MONDO:0850030","xrefs":{"Monarch":{"xref_id":"0850030"}}}


id: GO:0008311
data:
  {"annotated_genes":["SJAG_05373","SJAG_02298"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73616,88911],"is_not":false,"summary":null,"term":"GO:0008311"}]},"cv_name":"molecular_function","definition":"Catalysis of the sequential cleavage of mononucleotides from a free 3' terminus of a double-stranded DNA molecule.","definition_xrefs":["PMID:22562358","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"3'-5'-DNA exonuclease activity","termid":"GO:0008296"},{"relation_name":"is_a","term_name":"double-stranded DNA exodeoxyribonuclease activity","termid":"GO:0008309"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02298":null,"SJAG_05373":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0004527"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0140097"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016787","GO:0016788","GO:0140097","GO:0004527"],"is_obsolete":false,"name":"double-stranded DNA 3'-5' DNA exonuclease activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["EC:3.1.11.2","MetaCyc:3.1.11.2-RXN"],"synonyms":[{"name":"double-stranded DNA 3'-5' exodeoxyribonuclease activity","type":"exact"},{"name":"double-stranded DNA specific 3'-5' exodeoxyribonuclease activity","type":"related"},{"name":"exonuclease III activity","type":"narrow"},{"name":"exoribonuclease III activity","type":"narrow"}],"termid":"GO:0008311","terms_by_termid":{"GO:0008311":null}}


id: PATO:0001967
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A branched quality inhering in a bearer by virtue of the bearer's having three or more primary branches diverging radially from a single point.","definition_xrefs":["Hickey:1988"],"direct_ancestors":[{"relation_name":"is_a","term_name":"branched","termid":"PATO:0000402"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actinodromous","termid":"PATO:0001967"}


id: PBO:0067330
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 422, pseudogene","termid":"PBO:0067330"}


id: GO:0102797
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: geranial + O2 + H2O = H+ + geranate + hydrogen peroxide.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete geranial:oxygen oxidoreductase activity (obsolete GO:0102797)","termid":"GO:0102797"}


id: PBO:0058298
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4672","termid":"PBO:0058298"}


id: GO:0019080
data:
  {"annotated_genes":["SJAG_04546"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[66075],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0075523"}]},"cv_name":"biological_process","definition":"A process by which a viral gene is converted into a mature gene product or products (proteins or RNA). This includes viral transcription, processing to produce a mature RNA product, and viral translation.","definition_xrefs":["GOC:bf","ISBN:0121585336","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral process","termid":"GO:0016032"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04546":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"viral gene expression","references_by_uniquename":{"GO_REF:0000043":null},"synonyms":[{"name":"viral genome expression","type":"exact"}],"termid":"GO:0019080","terms_by_termid":{"GO:0075523":null}}


id: PBO:0058008
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3935","termid":"PBO:0058008"}


id: PBO:0088445
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonuclease H2 complex subunit Rnh202","termid":"PBO:0088445"}


id: PBO:0064856
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 1 regulatory inhibitor subunit 14D","termid":"PBO:0064856"}


id: GO:1902888
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within an astral microtubule.","definition_xrefs":["PMID:16054030","GO_REF:0000087","GOC:kmv","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to spindle microtubule","termid":"GO:1902889"},{"relation_name":"is_a","term_name":"protein localization to cytoplasmic microtubule","termid":"GO:1905755"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein localization to astral microtubule","synonyms":[{"name":"protein localisation in astral microtubule","type":"exact"},{"name":"protein localisation to astral microtubule","type":"exact"},{"name":"protein localization in astral microtubule","type":"exact"}],"termid":"GO:1902888"}


id: GO:0018338
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of a protein amino acid by cinnamylation.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete protein amino acid cinnamylation (obsolete GO:0018338)","synonyms":[{"name":"protein amino acid cinnamylation","type":"exact"}],"termid":"GO:0018338"}


id: PBO:0113050
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Co-chaperone that binds Hsp82p and activates its ATPase activity; plays a role in determining prion variants; similar to Hch1p; involved in the nuclear import of Hsp82p after DNA damage; expression is regulated by stresses such as heat shock; protein abundance increases in response to DNA replication stress","termid":"PBO:0113050"}


id: PBO:0039439
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat and fibronectin type III domain containing 1","termid":"PBO:0039439"}


id: GO:0006948
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process of syncytia-forming cell-cell fusion, caused by a virus.","definition_xrefs":["ISBN:0781718325"],"gene_count":0,"genotype_count":0,"name":"obsolete induction by virus of host cell-cell fusion (obsolete GO:0006948)","secondary_identifiers":["Reactome:R-HSA-9733458"],"synonyms":[{"name":"induction by virus of cell-cell fusion in host","type":"exact"},{"name":"viral-induced cell-cell fusion","type":"exact"},{"name":"viral-induced host cell-cell fusion","type":"exact"},{"name":"viral-induced membrane fusion","type":"narrow"}],"termid":"GO:0006948"}


id: GO:0006214
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of thymidine, deoxyribosylthymine thymine 2-deoxyriboside, a deoxynucleoside very widely distributed but occurring almost entirely as phosphoric esters in deoxynucleotides and deoxyribonucleic acid, DNA.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thymidine metabolic process","termid":"GO:0046104"},{"relation_name":"is_a","term_name":"pyrimidine deoxyribonucleoside catabolic process","termid":"GO:0046127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"thymidine catabolic process","secondary_identifiers":["GO:0006215"],"synonyms":[{"name":"deoxyribosylthymine catabolic process","type":"exact"},{"name":"deoxyribosylthymine catabolism","type":"exact"},{"name":"thymidine breakdown","type":"exact"},{"name":"thymidine catabolism","type":"exact"},{"name":"thymidine degradation","type":"exact"}],"termid":"GO:0006214"}


id: GO:0031914
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that decreases synaptic plasticity, the ability of synapses to change as circumstances require. They may alter function, such as increasing or decreasing their sensitivity, or they may increase or decrease in actual numbers.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of synaptic plasticity","termid":"GO:0048167"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of synaptic plasticity","synonyms":[{"name":"down regulation of synaptic plasticity","type":"exact"},{"name":"down-regulation of synaptic plasticity","type":"exact"},{"name":"downregulation of synaptic plasticity","type":"exact"},{"name":"inhibition of synaptic plasticity","type":"narrow"}],"termid":"GO:0031914"}


id: PBO:0044869
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DENN domain containing 2C","termid":"PBO:0044869"}


id: PR:P46595
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ubc4 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P46595"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-conjugating enzyme E2 4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC119.02","synonyms":[{"name":"E2 ubiquitin-conjugating enzyme 4 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ubc4","type":"exact"},{"name":"ubiquitin carrier protein 4 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ubiquitin-protein ligase 4 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P46595"}


id: GO:1905832
data:
  {"annotated_genes":["SJAG_02332"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[111819],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0110161"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of spindle assembly.","definition_xrefs":["PMID:27689799","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytoskeleton organization","termid":"GO:0051495"},{"relation_name":"is_a","term_name":"positive regulation of cell cycle process","termid":"GO:0090068"},{"relation_name":"is_a","term_name":"regulation of spindle assembly","termid":"GO:0090169"},{"relation_name":"is_a","term_name":"positive regulation of organelle assembly","termid":"GO:1902117"},{"relation_name":"positively_regulates","term_name":"spindle assembly","termid":"GO:0051225"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02332":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"regulates","termid":"GO:0000226"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0000226"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"positively_regulates","termid":"GO:0007010"},{"rel_name":"positively_regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0007010","GO:0000226","GO:0007049","GO:0008150"],"is_obsolete":false,"name":"positive regulation of spindle assembly","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of bipolar spindle biosynthesis","type":"narrow"},{"name":"activation of bipolar spindle formation","type":"narrow"},{"name":"activation of spindle assembly","type":"narrow"},{"name":"activation of spindle biosynthesis","type":"narrow"},{"name":"activation of spindle formation","type":"narrow"},{"name":"positive regulation of bipolar spindle biosynthesis","type":"exact"},{"name":"positive regulation of bipolar spindle formation","type":"exact"},{"name":"positive regulation of spindle biosynthesis","type":"exact"},{"name":"positive regulation of spindle formation","type":"exact"},{"name":"up regulation of bipolar spindle biosynthesis","type":"exact"},{"name":"up regulation of bipolar spindle formation","type":"exact"},{"name":"up regulation of spindle assembly","type":"exact"},{"name":"up regulation of spindle biosynthesis","type":"exact"},{"name":"up regulation of spindle formation","type":"exact"},{"name":"up-regulation of bipolar spindle biosynthesis","type":"exact"},{"name":"up-regulation of bipolar spindle formation","type":"exact"},{"name":"up-regulation of spindle assembly","type":"exact"},{"name":"up-regulation of spindle biosynthesis","type":"exact"},{"name":"up-regulation of spindle formation","type":"exact"},{"name":"upregulation of bipolar spindle biosynthesis","type":"exact"},{"name":"upregulation of bipolar spindle formation","type":"exact"},{"name":"upregulation of spindle assembly","type":"exact"},{"name":"upregulation of spindle biosynthesis","type":"exact"},{"name":"upregulation of spindle formation","type":"exact"}],"termid":"GO:1905832","terms_by_termid":{"GO:0110161":null}}


id: GO:0102130
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + a malonyl-[acp] = S-adenosyl-L-homocysteine + a malonyl-[acp] methyl ester.","definition_xrefs":["GOC:pz","RHEA:17105"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674","GO:0016741"],"is_obsolete":false,"name":"malonyl-CoA methyltransferase activity","secondary_identifiers":["MetaCyc:RXN-11475","EC:2.1.1.197"],"termid":"GO:0102130"}


id: MONDO:0004508
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of the periapical tissue. It includes general, unspecified, or acute nonsuppurative inflammation. Chronic nonsuppurative inflammation is periapical granuloma. Suppurative inflammation is periapical abscess.","definition_xrefs":["MESH:D010485"],"direct_ancestors":[{"relation_name":"is_a","term_name":"periodontitis","termid":"MONDO:0005076"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"periapical periodontitis","secondary_identifiers":["MEDGEN:45396","icd11.foundation:1395124674","SCTID:39273001","DOID:823","UMLS:C0031030","EFO:1001391"],"synonyms":[{"name":"apical periodontitis","type":"exact"}],"termid":"MONDO:0004508","xrefs":{"Monarch":{"xref_id":"0004508"}}}


id: MONDO:0001546
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spondyloarthropathy","termid":"MONDO:0005095"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"hypermobility of coccyx","secondary_identifiers":["icd11.foundation:588794167","SCTID:202809009","DOID:12537","MEDGEN:510502","ICD9:724.71","UMLS:C0158295"],"synonyms":[{"name":"coccygeal hypermobility syndrome","type":"exact"},{"name":"hypermobility of the coccyx","type":"exact"}],"termid":"MONDO:0001546","xrefs":{"Monarch":{"xref_id":"0001546"}}}


id: PBO:0072432
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S28 pseudogene 6","termid":"PBO:0072432"}


id: GO:0072402
data:
  {"annotated_genes":["SJAG_04183","SJAG_03048","SJAG_04332"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104519],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072429"},{"annotations":[102753],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072441"},{"annotations":[102754],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990820"},{"annotations":[102755,94909],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072435"}]},"cv_name":"biological_process","definition":"A process that occurs in response to signals generated as a result of DNA integrity checkpoint signaling.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to cell cycle checkpoint signaling","termid":"GO:0072396"}],"gene_count":3,"genes_by_uniquename":{"SJAG_03048":null,"SJAG_04183":null,"SJAG_04332":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to DNA integrity checkpoint signaling","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"DNA integrity checkpoint effector process","type":"exact"},{"name":"response to signal involved in DNA integrity checkpoint","type":"exact"}],"termid":"GO:0072402","terms_by_termid":{"GO:0072429":null,"GO:0072435":null,"GO:0072441":null,"GO:1990820":null}}


id: MONDO:0005387
data:
  {"annotated_genes":["SJAG_02339","SJAG_04950","SJAG_02294","SJAG_03051","SJAG_04148","SJAG_00103","SJAG_04738","SJAG_04114","SJAG_00377","SJAG_03418","SJAG_04703","SJAG_02954","SJAG_03698","SJAG_03720","SJAG_02690"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85774],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008840"},{"annotations":[86330],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009258"},{"annotations":[87319],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030736"},{"annotations":[86006],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013689"},{"annotations":[86764],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054850"},{"annotations":[87565],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013972"},{"annotations":[86375],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014126"},{"annotations":[85992],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014843"},{"annotations":[86782,86781],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054862"},{"annotations":[86077],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030870"},{"annotations":[86478],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0958035"},{"annotations":[87373],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010350"},{"annotations":[86967,86966],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014321"}]},"cv_name":"mondo","definition":"Absent or premature cessation of ovarian function due to a pathologic process originating within the ovaries.","definition_xrefs":["NCIT:C113352"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ovarian dysfunction","termid":"MONDO:0001889"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00103":null,"SJAG_00377":null,"SJAG_02294":null,"SJAG_02339":null,"SJAG_02690":null,"SJAG_02954":null,"SJAG_03051":null,"SJAG_03418":null,"SJAG_03698":null,"SJAG_03720":null,"SJAG_04114":null,"SJAG_04148":null,"SJAG_04703":null,"SJAG_04738":null,"SJAG_04950":null},"genotype_count":0,"is_obsolete":false,"name":"primary ovarian failure","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["Orphanet:619","NANDO:2100139","EFO:0004266","MESH:D016649","UMLS:C0085215","ICD9:256.39","MEDGEN:38820","DOID:5426","ICD10CM:E28.3","SCTID:65846009","SCTID:370999003","ICD9:253.4"],"synonyms":[{"name":"female hypergonadotropic hypogonadism","type":"related"},{"name":"hypergonadotrophic ovarian failure","type":"related"},{"name":"hypergonadotropic hypogonadism","type":"related"},{"name":"hypergonadotropic hypogonadism (female)","type":"related"},{"name":"premature menopause","type":"related"},{"name":"premature ovarian failure","type":"related"},{"name":"premature ovarian insufficiency","type":"related"},{"name":"primary female hypogonadism","type":"related"},{"name":"primary ovarian failure","type":"exact"},{"name":"primary ovarian insufficiency","type":"exact"}],"termid":"MONDO:0005387","terms_by_termid":{"MONDO:0008840":null,"MONDO:0009258":null,"MONDO:0010350":null,"MONDO:0013689":null,"MONDO:0013972":null,"MONDO:0014126":null,"MONDO:0014321":null,"MONDO:0014843":null,"MONDO:0030736":null,"MONDO:0030870":null,"MONDO:0054850":null,"MONDO:0054862":null,"MONDO:0958035":null},"xrefs":{"Monarch":{"xref_id":"0005387"}}}


id: MONDO:0012923
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any congenital generalized lipodystrophy in which the cause of the disease is a mutation in the CAV1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital generalized lipodystrophy","termid":"MONDO:0006536"},{"relation_name":"is_a","term_name":"Berardinelli-Seip congenital lipodystrophy","termid":"MONDO:0018883"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005093"],"is_obsolete":false,"name":"congenital generalized lipodystrophy type 3","secondary_identifiers":["UMLS:C2675861","OMIM:612526","MEDGEN:436541","MESH:C567282","GARD:13389","DOID:0111137"],"synonyms":[{"name":"BSCL3","type":"exact"},{"name":"Berardinelli-Seip congenital lipodystrophy type 3","type":"exact"},{"name":"Berardinelli-Seip congenital lipodystrophy, type 3","type":"related"},{"name":"CAV1 congenital generalised lipodystrophy (disease)","type":"exact"},{"name":"CAV1 congenital generalized lipodystrophy (disease)","type":"exact"},{"name":"CGL3","type":"exact"},{"name":"congenital generalised lipodystrophy (disease) caused by mutation in CAV1","type":"exact"},{"name":"congenital generalized lipodystrophy (disease) caused by mutation in CAV1","type":"exact"},{"name":"lipodystrophy, Berardinelli-Seip congenital, type 3","type":"related"},{"name":"lipodystrophy, congenital generalized, type 3","type":"related"},{"name":"type 3 Berardinelli-Seip congenital lipodystrophy","type":"related"}],"termid":"MONDO:0012923","xrefs":{"Monarch":{"xref_id":"0012923"}}}


id: PBO:0030869
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_rate_of_actomyosin_contractile_ring_contraction","termid":"PBO:0030869"}


id: GO:0097087
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of interleukin-17A due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["PMID:27901018","GOC:rv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"interleukin-17 production","termid":"GO:0032620"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"interleukin-17A production","secondary_identifiers":["GO:0150154"],"synonyms":[{"name":"IL-17A production","type":"exact"},{"name":"interleukin-17A biosynthetic process","type":"narrow"}],"termid":"GO:0097087"}


id: MONDO:1011088
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Renal dysplasia that occurs in domestic cat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal dysplasia, non-human animal","termid":"MONDO:1010268"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"renal dysplasia, domestic cat","secondary_identifiers":["OMIA:001135-9685"],"termid":"MONDO:1011088","xrefs":{"Monarch":{"xref_id":"1011088"}}}


id: PBO:0072193
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S17 pseudogene 10","termid":"PBO:0072193"}


id: MONDO:0008603
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any isolated trigonocephaly in which the cause of the disease is a mutation in the FGFR1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isolated trigonocephaly","termid":"MONDO:0018065"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"trigonocephaly 1","secondary_identifiers":["OMIM:190440","MEDGEN:98473","GARD:18558","UMLS:C0432122"],"synonyms":[{"name":"FGFR1 isolated trigonocephaly","type":"exact"},{"name":"TRIGNO1","type":"related"},{"name":"craniosynostosis, metopic","type":"related"},{"name":"isolated trigonocephaly caused by mutation in FGFR1","type":"exact"},{"name":"trigonocephaly 1","type":"exact"},{"name":"trigonocephaly type 1","type":"exact"}],"termid":"MONDO:0008603","xrefs":{"Monarch":{"xref_id":"0008603"}}}


id: PBO:0070111
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 25 pseudogene","termid":"PBO:0070111"}


id: PBO:0051738
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"INTS6L antisense RNA 1","termid":"PBO:0051738"}


id: PBO:0060030
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4 pseudogene 18","termid":"PBO:0060030"}


id: PBO:0076356
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synaptotagmin like 3","termid":"PBO:0076356"}


id: GO:0032653
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of interleukin-10 production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokine production","termid":"GO:0001817"},{"relation_name":"regulates","term_name":"interleukin-10 production","termid":"GO:0032613"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of interleukin-10 production","secondary_identifiers":["GO:2001179","GO:0045074"],"synonyms":[{"name":"regulation of IL-10 production","type":"exact"},{"name":"regulation of interleukin-10 biosynthetic process","type":"narrow"},{"name":"regulation of interleukin-10 secretion","type":"narrow"}],"termid":"GO:0032653"}


id: GO:0062012
data:
  {"annotated_genes":["SJAG_01307","SJAG_02785","SJAG_04018","SJAG_01672","SJAG_03538","SJAG_02104","SJAG_04422","SJAG_02380","SJAG_01402","SJAG_03130","SJAG_00685","SJAG_02406","SJAG_02044","SJAG_01187","SJAG_05006","SJAG_05314"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94246],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010895"},{"annotations":[71261],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045717"},{"annotations":[76398,73435],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045820"},{"annotations":[115863,111755],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001211"},{"annotations":[118386],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905707"},{"annotations":[110230],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070452"},{"annotations":[96936],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001172"},{"annotations":[90055],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905857"},{"annotations":[89399,114065],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090180"},{"annotations":[89553],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904775"},{"annotations":[75915],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045540"},{"annotations":[88924,106212],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032443"},{"annotations":[75490],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010906"},{"annotations":[70471],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006110"},{"annotations":[76397],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043456"},{"annotations":[75489],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010510"}]},"cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of a small molecule metabolic process.","definition_xrefs":["GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of metabolic process","termid":"GO:0019222"},{"relation_name":"regulates","term_name":"small molecule metabolic process","termid":"GO:0044281"}],"gene_count":16,"genes_by_uniquename":{"SJAG_00685":null,"SJAG_01187":null,"SJAG_01307":null,"SJAG_01402":null,"SJAG_01672":null,"SJAG_02044":null,"SJAG_02104":null,"SJAG_02380":null,"SJAG_02406":null,"SJAG_02785":null,"SJAG_03130":null,"SJAG_03538":null,"SJAG_04018":null,"SJAG_04422":null,"SJAG_05006":null,"SJAG_05314":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"regulation of small molecule metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-9861718"],"synonyms":[{"name":"regulation of small molecule metabolism","type":"exact"}],"termid":"GO:0062012","terms_by_termid":{"GO:0006110":null,"GO:0010510":null,"GO:0010895":null,"GO:0010906":null,"GO:0032443":null,"GO:0043456":null,"GO:0045540":null,"GO:0045717":null,"GO:0045820":null,"GO:0070452":null,"GO:0090180":null,"GO:1904775":null,"GO:1905707":null,"GO:1905857":null,"GO:2001172":null,"GO:2001211":null}}


id: _global:functionally_related_to
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"A grouping relationship for any relationship directly involving a function, or that holds because of a function of one of the related entities.","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally_related_to","secondary_identifiers":["RO:0002328"],"termid":"_global:functionally_related_to"}


id: PR:O94556
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A cell division cycle protein 23 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR12558:SF10","OMA:SCHPO00543","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anaphase-promoting complex subunit 8 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6F12.14","secondary_identifiers":["UniProtKB:O94556"],"synonyms":[{"name":"20S cyclosome/APC complex protein apc8 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-CDC23","type":"exact"},{"name":"cell untimely torn protein 23 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94556"}


id: FYPO:0008075
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the cell cortex of one or both cell tips is increased.","definition_xrefs":["PMID:25959226"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to cell cortex of cell tip during vegetative growth","termid":"FYPO:0006875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000138","FYPO:0005447","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"increased protein localization to cell cortex of cell tip during vegetative growth","termid":"FYPO:0008075"}


id: PATO:0000530
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000530 soil nutrient sensitivity value (obsolete PATO:0000530)","termid":"PATO:0000530"}


id: MONDO:0009897
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Adult polyglucosan body disease (APBD) is a glycogen storage disease of adults characterized by progressive upper and lower motor neuron dysfunction, progressive neurogenic bladder and cognitive difficulties that can lead to dementia.","definition_xrefs":["Orphanet:206583"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycogen storage disease due to glycogen branching enzyme deficiency","termid":"MONDO:0009292"},{"relation_name":"is_a","term_name":"hereditary peripheral neuropathy","termid":"MONDO:0020127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005244","MONDO:0037792"],"is_obsolete":false,"name":"adult polyglucosan body disease","secondary_identifiers":["OMIM:263570","GARD:108","MEDGEN:342338","SCTID:721099001","UMLS:C1849722","MESH:C564878","NANDO:2201163"],"synonyms":[{"name":"APBD","type":"exact"},{"name":"APBN","type":"related"},{"name":"polyglucosan body disease, adult","type":"related"},{"name":"polyglucosan body disease, adult form","type":"related"},{"name":"polyglucosan body neuropathy, adult form","type":"related"}],"termid":"MONDO:0009897","xrefs":{"Monarch":{"xref_id":"0009897"}}}


id: PBO:0053381
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 308","termid":"PBO:0053381"}


id: GO:0019526
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of pentitols, any alditol with a chain of five carbon atoms in the molecule.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alditol biosynthetic process","termid":"GO:0019401"},{"relation_name":"is_a","term_name":"pentitol metabolic process","termid":"GO:0019519"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0005975"],"is_obsolete":false,"name":"pentitol biosynthetic process","synonyms":[{"name":"pentitol anabolism","type":"exact"},{"name":"pentitol biosynthesis","type":"exact"},{"name":"pentitol formation","type":"exact"},{"name":"pentitol synthesis","type":"exact"}],"termid":"GO:0019526"}


id: GO:0050049
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-leucine + H2O + NAD+ = 4-methyl-2-oxopentanoate + NH3 + NADH.","definition_xrefs":["EC:1.4.1.9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor","termid":"GO:0016639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"L-leucine dehydrogenase activity","secondary_identifiers":["MetaCyc:LEUCINE-DEHYDROGENASE-RXN","RHEA:12220"],"synonyms":[{"name":"L-leucine:NAD+ oxidoreductase (deaminating)","type":"related"},{"name":"L-leucine:NAD+ oxidoreductase, deaminating","type":"related"},{"name":"LeuDH activity","type":"related"},{"name":"leucine dehydrogenase activity","type":"related"}],"termid":"GO:0050049"}


id: GO:0021986
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the habenula over time from its initial formation until its mature state. The habenula is the group of nuclei that makes up the stalk of the pineal gland.","definition_xrefs":["GO_REF:0000021","GOC:cls","GOC:dph","GOC:jid","ISBN:9780721601465","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"epithalamus development","termid":"GO:0021538"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"habenula development","termid":"GO:0021986"}


id: MONDO:0035556
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete partial atrioventricular septal defect without ventricular hypoplasia (obsolete MONDO:0035556)","secondary_identifiers":["Orphanet:576235"],"termid":"MONDO:0035556","xrefs":{"Monarch":{"xref_id":"0035556"}}}


id: PBO:0078970
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ser (anticodon CGA) 2-1","termid":"PBO:0078970"}


id: FYPO:0001231
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the size, shape, and structure of the cell cortex is normal (i.e. indistinguishable from wild type). The cell cortex is the region of a cell that lies just beneath the plasma membrane.","definition_xrefs":["GO:0005938","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal subcellular component","termid":"FYPO:0001233"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal cell cortex morphology","termid":"FYPO:0001231"}


id: MONDO:0020457
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hemolytic anemia","termid":"MONDO:0003664"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0002280"}],"interesting_parent_ids":["MONDO:0002280","MONDO:0005570"],"is_obsolete":false,"name":"6-phosphogluconate dehydrogenase deficiency","secondary_identifiers":["Orphanet:99135","GARD:16897","OMIM:619199","UMLS:C5543091","MEDGEN:1783871"],"termid":"MONDO:0020457","xrefs":{"Monarch":{"xref_id":"0020457"}}}


id: PBO:0055978
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat neuronal 1","termid":"PBO:0055978"}


id: PBO:0041663
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium voltage-gated channel auxiliary subunit gamma 8","termid":"PBO:0041663"}


id: GO:0005996
data:
  {"annotated_genes":["SJAG_04660","SJAG_03174","SJAG_04334","SJAG_04276","SJAG_00605","SJAG_00039","SJAG_03660","SJAG_02596","SJAG_02135","SJAG_03828","SJAG_04495","SJAG_06622","SJAG_02713","SJAG_01402","SJAG_00461","SJAG_01784","SJAG_00070","SJAG_01414","SJAG_02783","SJAG_02010","SJAG_03903","SJAG_04192","SJAG_02107","SJAG_03336","SJAG_02954","SJAG_02950","SJAG_03370","SJAG_03373","SJAG_03958","SJAG_00839","SJAG_02796","SJAG_01310","SJAG_02951","SJAG_00134","SJAG_02696","SJAG_03743","SJAG_05006","SJAG_02945","SJAG_02148","SJAG_02369","SJAG_06621","SJAG_02297","SJAG_03822","SJAG_00240","SJAG_00027","SJAG_02009","SJAG_03818"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96114,95386,101543],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019568"},{"annotations":[106197,95382,106196,104005,109773,105827,98353,109771,109772,116732,98623,94888,103749,78226,109769,105826,109767,105825,109770,109768],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061621"},{"annotations":[58651],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019303"},{"annotations":[74902],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006014"},{"annotations":[101544,95388,96115],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042843"},{"annotations":[66007],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042732"},{"annotations":[68272,61310,70078,94889,63386],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006000"},{"annotations":[114102,114103,114096,114114],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033499"},{"annotations":[61859],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006012"},{"annotations":[116219,68438,62745,59757],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006006"},{"annotations":[114997,88866,114998,99088,99089],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019655"},{"annotations":[76517,79517],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006013"},{"annotations":[96936],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:2001172"},{"annotations":[75490],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0010906"},{"annotations":[119410],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005998"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving monosaccharides, the simplest carbohydrates. They are polyhydric alcohols containing either an aldehyde or a keto group and between three to ten or more carbon atoms. They form the constitutional repeating units of oligo- and polysaccharides.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate metabolic process","termid":"GO:0005975"},{"relation_name":"is_a","term_name":"small molecule metabolic process","termid":"GO:0044281"}],"gene_count":47,"genes_by_uniquename":{"SJAG_00027":null,"SJAG_00039":null,"SJAG_00070":null,"SJAG_00134":null,"SJAG_00240":null,"SJAG_00461":null,"SJAG_00605":null,"SJAG_00839":null,"SJAG_01310":null,"SJAG_01402":null,"SJAG_01414":null,"SJAG_01784":null,"SJAG_02009":null,"SJAG_02010":null,"SJAG_02107":null,"SJAG_02135":null,"SJAG_02148":null,"SJAG_02297":null,"SJAG_02369":null,"SJAG_02596":null,"SJAG_02696":null,"SJAG_02713":null,"SJAG_02783":null,"SJAG_02796":null,"SJAG_02945":null,"SJAG_02950":null,"SJAG_02951":null,"SJAG_02954":null,"SJAG_03174":null,"SJAG_03336":null,"SJAG_03370":null,"SJAG_03373":null,"SJAG_03660":null,"SJAG_03743":null,"SJAG_03818":null,"SJAG_03822":null,"SJAG_03828":null,"SJAG_03903":null,"SJAG_03958":null,"SJAG_04192":null,"SJAG_04276":null,"SJAG_04334":null,"SJAG_04495":null,"SJAG_04660":null,"SJAG_05006":null,"SJAG_06621":null,"SJAG_06622":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0005975"],"is_obsolete":false,"name":"monosaccharide metabolic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000107":null},"synonyms":[{"name":"monosaccharide metabolism","type":"exact"}],"termid":"GO:0005996","terms_by_termid":{"GO:0005998":null,"GO:0006000":null,"GO:0006006":null,"GO:0006012":null,"GO:0006013":null,"GO:0006014":null,"GO:0010906":null,"GO:0019303":null,"GO:0019568":null,"GO:0019655":null,"GO:0033499":null,"GO:0042732":null,"GO:0042843":null,"GO:0061621":null,"GO:2001172":null}}


id: PBO:0027968
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_copper","termid":"PBO:0027968"}


id: PBO:0076577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TBC1 domain family member 3 pseudogene 5","termid":"PBO:0076577"}


id: PBO:0060874
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neural EGFL like 2","termid":"PBO:0060874"}


id: MONDO:0012601
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autism, susceptiblity to","termid":"MONDO:0020836"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autism, susceptibility to, 10","secondary_identifiers":["OMIM:611016","UMLS:C1970242","MEDGEN:370865"],"synonyms":[{"name":"AUTS10","type":"exact"},{"name":"autism, susceptibility to, 10","type":"exact"}],"termid":"MONDO:0012601","xrefs":{"Monarch":{"xref_id":"0012601"}}}


id: PR:O74999
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rhp7 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74999"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA repair protein rhp7 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC330.02","synonyms":[{"name":"RAD7 homolog (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-rhp7","type":"exact"}],"termid":"PR:O74999"}


id: GO:0008218
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The production of light by certain enzyme-catalyzed reactions in cells.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic process","termid":"GO:0008152"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"bioluminescence","secondary_identifiers":["Wikipedia:Bioluminescence"],"termid":"GO:0008218"}


id: MONDO:0700129
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Translocation Down syndrome in which the extra (partial or total) copy of chromosome 21 attached to another chromosome is present in some of the cells of the organism.","direct_ancestors":[{"relation_name":"is_a","term_name":"translocation Down syndrome","termid":"MONDO:0700128"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mosaic translocation Down syndrome","termid":"MONDO:0700129","xrefs":{"Monarch":{"xref_id":"0700129"}}}


id: PBO:0082873
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cortical ER protein involved in ER-plasma membrane tethering; one of 6 proteins (Ist2p, Scs2p, Scs22p, Tcb1p, Tcb2p, Tcb3p) that connect ER to the plasma membrane (PM) and regulate PM phosphatidylinositol-4-phosphate (PI4P) levels by controlling access of Sac1p phosphatase to its substrate PI4P in the PM; localized to the bud via specific mRNA transport; non-tagged protein detected in a phosphorylated state in mitochondria; C-termini of Tcb1p, Tcb2p and Tcb3p interact","termid":"PBO:0082873"}


id: PBO:0071568
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L35a pseudogene 34","termid":"PBO:0071568"}


id: MONDO:0012144
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Waardenburg syndrome type 2 in which the cause of the disease is a mutation in the SNAI2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Waardenburg syndrome type 2","termid":"MONDO:0019517"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"Waardenburg syndrome type 2D","secondary_identifiers":["MEDGEN:323102","DOID:0110952","MESH:C563839","OMIM:608890","UMLS:C1837203"],"synonyms":[{"name":"SNAI2 Waardenburg syndrome type 2","type":"exact"},{"name":"WS2D","type":"exact"},{"name":"Waardenburg syndrome type 2 caused by mutation in SNAI2","type":"exact"},{"name":"Waardenburg syndrome type IID","type":"exact"},{"name":"Waardenburg syndrome, type 2D","type":"related"}],"termid":"MONDO:0012144","xrefs":{"Monarch":{"xref_id":"0012144"}}}


id: GO:0009671
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: nitrate(out) + H+(out) = nitrate(in) + H+(in).","definition_xrefs":["GOC:mah","PMID:10066586","PMID:1990981"],"direct_ancestors":[{"relation_name":"is_a","term_name":"solute:proton symporter activity","termid":"GO:0015295"},{"relation_name":"is_a","term_name":"high-affinity secondary active nitrite transmembrane transporter activity","termid":"GO:0015513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"nitrate:proton symporter activity","synonyms":[{"name":"nitrate(chlorate):hydrogen symporter activity","type":"exact"},{"name":"nitrate(chlorate):proton symporter activity","type":"exact"},{"name":"nitrate:hydrogen symporter activity","type":"exact"}],"termid":"GO:0009671"}


id: PR:Q9UTR9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- asa1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UTR9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ASTRA-associated protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1006.02","synonyms":[{"name":"Spom972h-asa1","type":"exact"}],"termid":"PR:Q9UTR9"}


id: GO:0102224
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: GDP-N,N'-diacetylbacillosamine + H2O = 2,4-diacetamido-2,4,6-trideoxy-alpha-D-mannopyranose + GDP + H+.","definition_xrefs":["RHEA:46316"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0016798","GO:0003674"],"is_obsolete":false,"name":"GDP-2,4-diacetamido-2,4,6-trideoxy-alpha-D-glucopyranose hydrolase/2-epimerase activity","secondary_identifiers":["MetaCyc:RXN-12236"],"termid":"GO:0102224"}


id: MONDO:0042484
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"systemic mycosis","termid":"MONDO:0000256"},{"relation_name":"is_a","term_name":"sporotrichosis","termid":"MONDO:0005968"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"disseminated sporotrichosis","secondary_identifiers":["UMLS:C0276725","SCTID:91051003","MEDGEN:547522","icd11.foundation:984175752"],"synonyms":[{"name":"disseminated sporotrichosis","type":"exact"}],"termid":"MONDO:0042484","xrefs":{"Monarch":{"xref_id":"0042484"}}}


id: GO:0018819
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-lactoyl-CoA = acryloyl-CoA + H2O.","definition_xrefs":["RHEA:34691"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"lactoyl-CoA dehydratase activity","secondary_identifiers":["MetaCyc:LACTOYL-COA-DEHYDRATASE-RXN","UM-BBD_reactionID:r0086","EC:4.2.1.54"],"synonyms":[{"name":"acrylyl coenzyme A hydratase activity","type":"related"},{"name":"lactoyl coenzyme A dehydratase activity","type":"related"},{"name":"lactoyl-CoA hydro-lyase (acryloyl-CoA-forming)","type":"related"},{"name":"lactoyl-CoA hydro-lyase activity","type":"related"},{"name":"lactyl CoA dehydratase activity","type":"related"},{"name":"lactyl-coenzyme A dehydrase activity","type":"related"}],"termid":"GO:0018819"}


id: PBO:0084373
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lipoyl ligase; involved in the modification of mitochondrial enzymes by the attachment of lipoic acid groups","termid":"PBO:0084373"}


id: PBO:0058998
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"malonyl-CoA decarboxylase","termid":"PBO:0058998"}


id: FYPO:0007055
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which  endosome organization is normal (i.e. indistinguishable from wild type).","definition_xrefs":["GO:0007032","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"},{"relation_name":"is_a","term_name":"normal cellular component organization","termid":"FYPO:0006003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0001320","FYPO:0001312"],"is_obsolete":false,"name":"normal endosome organization","synonyms":[{"name":"during vegetative growth during mitotic cell cycle","type":"related"},{"name":"normal endosome organisation","type":"exact"},{"name":"normal endosome organization during vegetative growth","type":"exact"}],"termid":"FYPO:0007055"}


id: PBO:0003303
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme Ubc4","termid":"PBO:0003303"}


id: PBO:0076881
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed 30","termid":"PBO:0076881"}


id: MONDO:0020348
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acute motor-sensory axonal neuropathy (AMSAN) is a motor-sensory, axonal form of Guillain-Barre syndrome (GBS).","definition_xrefs":["Orphanet:98917"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"Guillain-Barre syndrome, familial","termid":"MONDO:0007691"},{"relation_name":"is_a","term_name":"Guillain-Barre syndrome","termid":"MONDO:0016218"},{"relation_name":"is_a","term_name":"acute disease","termid":"MONDO:0020683"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"acute motor and sensory axonal neuropathy","secondary_identifiers":["UMLS:C3900111","GARD:19601","MEDGEN:859705","NCIT:C116927","SCTID:716722005"],"synonyms":[{"name":"AMSAN","type":"exact"},{"name":"acute motor-sensory axonal GBS","type":"exact"},{"name":"acute motor-sensory axonal Guillain-Barre syndrome","type":"exact"},{"name":"acute motor-sensory axonal Guillain-Barré syndrome","type":"exact"},{"name":"acute motor-sensory axonal neuropathy","type":"exact"}],"termid":"MONDO:0020348","xrefs":{"Monarch":{"xref_id":"0020348"}}}


id: MONDO:0019267
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Vitamin B12-unresponsive methylmalonic acidemia type mut- is an inborn error of metabolism characterized by recurrent ketoacidotic comas or transient vomiting, dehydration, hypotonia and intellectual deficit, which does not respond to administration of vitamin B12.","definition_xrefs":["Orphanet:79312"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methylmalonic aciduria due to methylmalonyl-CoA mutase deficiency","termid":"MONDO:0009612"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004736"],"is_obsolete":false,"name":"vitamin B12-unresponsive methylmalonic acidemia type mut-","secondary_identifiers":["MEDGEN:575192","GARD:16714","UMLS:C0342719","SCTID:237946002"],"synonyms":[{"name":"partial deficiency of methylmalonyl-CoA mutase","type":"exact"},{"name":"vitamin B12-unresponsive methylmalonic aciduria type mut-","type":"exact"}],"termid":"MONDO:0019267","xrefs":{"Monarch":{"xref_id":"0019267"}}}


id: SO:0000963
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Structural unit composed of a self-replicating, single-stranded, linear RNA molecule.","definition_xrefs":["SO:ma"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"linear","termid":"SO:0000987"},{"relation_name":"is_a","term_name":"single_stranded_RNA_chromosome","termid":"SO:0000962"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"linear_single_stranded_RNA_chromosome","synonyms":[{"name":"linear single stranded RNA chromosome","type":"exact"}],"termid":"SO:0000963"}


id: GO:0021904
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the neural tube is regionalized in the dorsoventral axis.","definition_xrefs":["GOC:dph","GO_REF:0000021","GOC:cls","PMID:11262869","GOC:jid","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dorsal/ventral pattern formation","termid":"GO:0009953"},{"relation_name":"part_of","term_name":"neural tube patterning","termid":"GO:0021532"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dorsal/ventral neural tube patterning","synonyms":[{"name":"dorsal-ventral neural tube patterning","type":"exact"},{"name":"dorsoventral neural tube patterning","type":"exact"}],"termid":"GO:0021904"}


id: PBO:0028284
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_Ku-0063794","termid":"PBO:0028284"}


id: MONDO:0007668
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"globulin anomaly involving beta (2A)-globulin","secondary_identifiers":["MEDGEN:330741","MESH:C564229","UMLS:C1842009","OMIM:137900"],"synonyms":[{"name":"globulin anomaly involving beta (2A)-globulin","type":"exact"}],"termid":"MONDO:0007668","xrefs":{"Monarch":{"xref_id":"0007668"}}}


id: SO:0001579
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0001579 transcript_sequence_variant (obsolete SO:0001579)","synonyms":[{"name":"transcript sequence variant","type":"exact"}],"termid":"SO:0001579"}


id: MONDO:0958334
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"heritable pulmonary arterial hypertension","termid":"MONDO:0017148"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pulmonary hypertension, primary, 6","secondary_identifiers":["OMIM:620777","UMLS:C5935600","MEDGEN:1863339"],"termid":"MONDO:0958334","xrefs":{"Monarch":{"xref_id":"0958334"}}}


id: MONDO:0013665
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"juvenile myoclonic epilepsy","termid":"MONDO:0009696"},{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epilepsy, juvenile myoclonic, susceptibility to, 9","secondary_identifiers":["MEDGEN:481962","DOID:0111328","OMIM:614280","UMLS:C3280332"],"synonyms":[{"name":"EJM9","type":"exact"},{"name":"epilepsy, juvenile myoclonic, susceptibility to, 9","type":"exact"}],"termid":"MONDO:0013665","xrefs":{"Monarch":{"xref_id":"0013665"}}}


id: MOD:00527
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod N-linked glycosylation","definition_xrefs":["RESID:AA0151#var","Unimod:159","DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N4-glycosyl-L-asparagine","termid":"MOD:00160"},{"relation_name":"is_a","term_name":"complex glycosylation","termid":"MOD:00725"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"Hex3HexNAc2 N4-glycosylated asparagine","synonyms":[{"name":"(Hex)3-HexNAc-HexNAc","type":"exact"},{"name":"Hex(3)HexNAc(2)","type":"related"},{"name":"Hex3HexNAc2","type":"related"}],"termid":"MOD:00527"}


id: MONDO:0019917
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Maternal uniparental disomy of chromosome 20 (UPD 20) is a very rare chromosomal anomaly in which both copies of chromosome 20 are inherited from the mother. The main feature described is prenatal and postnatal growth retardation. Microcephaly, minor dysmorphic features and psychomotor developmental delay have been occasionally reported. Maternal UPD20 is most often ascertained by a mosaic trisomy 20 pregnancy.","definition_xrefs":["Orphanet:96186"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome 20 disorder","termid":"MONDO:0700025"},{"relation_name":"is_a","term_name":"uniparental disomy","termid":"MONDO:0700086"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"maternal uniparental disomy of chromosome 20","secondary_identifiers":["icd11.foundation:700797720","GARD:16849","MEDGEN:909388","DOID:0111714","SCTID:715735007","UMLS:C4275029","OMIM:617352"],"synonyms":[{"name":"MBCS","type":"related"},{"name":"MULCHANDANI-BHOJ-CONLIN syndrome","type":"related"},{"name":"UPD(20)mat","type":"exact"},{"name":"maternal UPD(20)","type":"exact"},{"name":"maternal uniparental disomy of chromosome type 20","type":"exact"},{"name":"uniparental disomy, maternal, chromosome 20","type":"related"}],"termid":"MONDO:0019917","xrefs":{"Monarch":{"xref_id":"0019917"}}}


