# terms

id: SO:0001860
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A DNA motif that contains a core consensus sequence AGGTAAGGGTAATGCAC, is found in the intergenic regions of rDNA repeats, and is bound by an RNA polymerase I transcription termination factor (e.g. S. pombe Reb1). The S. pombe telomeric repeat consensus is TTAC(0-1)A(0-1)G(1-8).","definition_xrefs":["ISBN:978-0199638901","PMID:9016645"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA_motif","termid":"SO:0000713"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rDNA_intergenic_spacer_element","synonyms":[{"name":"rDIS","type":"exact"}],"termid":"SO:0001860"}


id: MONDO:0003861
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An eccrine adenocarcinoma that arises from the sweat glands in the vulva.","definition_xrefs":["NCIT:C40305"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eccrine carcinoma","termid":"MONDO:0024240"},{"relation_name":"is_a","term_name":"vulvar adenocarcinoma","termid":"MONDO:0024336"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0004992"],"is_obsolete":false,"name":"vulvar eccrine adenocarcinoma","secondary_identifiers":["UMLS:C2202743","DOID:6339","MEDGEN:384495"],"synonyms":[{"name":"eccrine carcinoma of mammalian vulva","type":"exact"},{"name":"mammalian vulva eccrine carcinoma","type":"exact"},{"name":"vulvar eccrine adenocarcinoma","type":"exact"}],"termid":"MONDO:0003861","xrefs":{"Monarch":{"xref_id":"0003861"}}}


id: MONDO:0015088
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Autosomal dominant form of pure hereditary spastic paraplegia.","definition_xrefs":["MONDO:patterns/autosomal_dominant"],"gene_count":0,"genotype_count":0,"name":"obsolete autosomal dominant pure spastic paraplegia (obsolete MONDO:0015088)","secondary_identifiers":["Orphanet:100980"],"synonyms":[{"name":"autosomal dominant pure HSP","type":"exact"},{"name":"autosomal dominant pure SPG","type":"exact"},{"name":"autosomal dominant pure hereditary spastic paraplegia","type":"exact"},{"name":"autosomal dominant uncomplicated HSP","type":"exact"},{"name":"autosomal dominant uncomplicated SPG","type":"exact"},{"name":"autosomal dominant uncomplicated spastic paraplegia","type":"exact"},{"name":"pure hereditary spastic paraplegia, autosomal dominant","type":"exact"}],"termid":"MONDO:0015088","xrefs":{"Monarch":{"xref_id":"0015088"}}}


id: PBO:0072382
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS27A pseudogene 8","termid":"PBO:0072382"}


id: MONDO:0013491
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"megalencephalic leukoencephalopathy with subcortical cysts","termid":"MONDO:0011391"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"megalencephalic leukoencephalopathy with subcortical cysts 2B, remitting, with or without intellectual disability","secondary_identifiers":["DOID:0080317","GARD:15729","MEDGEN:462706","UMLS:C3151356","OMIM:613926"],"synonyms":[{"name":"MLC2B","type":"related"},{"name":"megalencephalic leukoencephalopathy with subcortical cysts 2B, remitting, with or without intellectual disability","type":"exact"},{"name":"megalencephalic leukoencephalopathy with subcortical cysts 2B, remitting, with or without mental retardation","type":"exact"}],"termid":"MONDO:0013491","xrefs":{"Monarch":{"xref_id":"0013491"}}}


id: PBO:0045430
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DPY19L1 pseudogene 1","termid":"PBO:0045430"}


id: PBO:0040084
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arylsulfatase D pseudogene 1","termid":"PBO:0040084"}


id: MONDO:0017493
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"fibular hemimelia","termid":"MONDO:0019672"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"fibular hemimelia, bilateral","secondary_identifiers":["Orphanet:295083","icd11.foundation:1479927692"],"synonyms":[{"name":"fibular longitudinal meromelia, bilateral","type":"exact"}],"termid":"MONDO:0017493","xrefs":{"Monarch":{"xref_id":"0017493"}}}


id: GO:0008929
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: glycerone phosphate = methylglyoxal + phosphate.","definition_xrefs":["RHEA:17937","EC:4.2.3.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on phosphates","termid":"GO:0016838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"methylglyoxal synthase activity","secondary_identifiers":["MetaCyc:METHGLYSYN-RXN","KEGG_REACTION:R01016"],"synonyms":[{"name":"glycerone-phosphate phospho-lyase (methylglyoxal-forming)","type":"related"},{"name":"glycerone-phosphate phospho-lyase activity","type":"related"},{"name":"methylglyoxal synthetase activity","type":"related"}],"termid":"GO:0008929"}


id: PBO:0080393
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VPS26A pseudogene 1","termid":"PBO:0080393"}


id: GO:0001951
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Uptake of D-glucose into the blood by absorption from the small intestine.","definition_xrefs":["PMID:5601832","GOC:mgi_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intestinal hexose absorption","termid":"GO:0106001"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"intestinal D-glucose absorption","termid":"GO:0001951"}


id: GO:0060263
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate frequency or extent of a phase of elevated metabolic activity, during which oxygen consumption increases; this leads to the production, by an NADH dependent system, of hydrogen peroxide (H2O2), superoxide anions and hydroxyl radicals.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of metabolic process","termid":"GO:0019222"},{"relation_name":"regulates","term_name":"respiratory burst","termid":"GO:0045730"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of respiratory burst","termid":"GO:0060263"}


id: GO:0018245
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The glycosylation of protein via the O4' atom of peptidyl-tyrosine, O4'-glycosyl-L-tyrosine; the carbohydrate is glucose, the origin for glycogen.","definition_xrefs":["RESID:AA0157"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein O-linked glycosylation","termid":"GO:0006493"},{"relation_name":"is_a","term_name":"peptidyl-tyrosine modification","termid":"GO:0018212"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006486"}],"interesting_parent_ids":["GO:0006486","GO:0008150"],"is_obsolete":false,"name":"protein O-linked glycosylation via tyrosine","synonyms":[{"name":"protein amino acid O-linked glycosylation via tyrosine","type":"exact"}],"termid":"GO:0018245"}


id: MONDO:0054550
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial avascular necrosis of femoral head","termid":"MONDO:0012126"},{"relation_name":"is_a","term_name":"dysplasia of the proximal femoral epiphyses","termid":"MONDO:1030002"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"avascular necrosis of femoral head, primary, 1","secondary_identifiers":["MEDGEN:1639295","UMLS:C4551562","OMIM:608805"],"synonyms":[{"name":"ANFH1","type":"related"},{"name":"Femoral head, avascular necrosis of","type":"related"},{"name":"avascular necrosis of femoral head, primary, 1","type":"exact"},{"name":"avascular necrosis of the femoral head","type":"exact"},{"name":"femoral head, aseptic necrosis of","type":"related"},{"name":"ischaemic necrosis of femoral head","type":"related"},{"name":"ischemic necrosis of femoral head","type":"related"},{"name":"osteonecrosis of femoral head","type":"related"}],"termid":"MONDO:0054550","xrefs":{"Monarch":{"xref_id":"0054550"}}}


id: PBO:0085680
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in prospore membrane morphogenesis; peripheral membrane protein that localizes to the prospore membrane and at numerous membrane contact sites; involved in sporulation, vacuolar protein sorting, prospore membrane formation during sporulation, and protein-Golgi retention; required for mitochondrial integrity; contains a PH-like domain; homologous to human CHAC and COH1 which are involved in Chorea-acanthocytosis and Cohen syndrome, respectively","termid":"PBO:0085680"}


id: PBO:0090139
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitotic cohesin complex, STAG protein subunit Psc3","termid":"PBO:0090139"}


id: MONDO:0008179
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Paroxysmal extreme pain disorder is a rare disorder of abnormal pain sensation.","definition_xrefs":["Orphanet:46348"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"},{"relation_name":"is_a","term_name":"neurological pain disorder","termid":"MONDO:0700057"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paroxysmal extreme pain disorder","secondary_identifiers":["ICD9:349.89","SCTID:699190008","DOID:0111537","MEDGEN:331565","NCIT:C125385","GARD:12854","MESH:C563475","UMLS:C1833661","icd11.foundation:9604457","OMIM:167400"],"synonyms":[{"name":"PEPD","type":"related"},{"name":"Pexpd","type":"related"},{"name":"familial rectal pain","type":"exact"},{"name":"familial rectal syndrome","type":"related"},{"name":"pain, submandibular, ocular, and rectal, with flushing","type":"related"},{"name":"paroxysmal extreme pain disorder","type":"exact"},{"name":"rectal pain, familial","type":"related"},{"name":"submandibular, ocular, and rectal pain with flushing","type":"related"}],"termid":"MONDO:0008179","xrefs":{"Monarch":{"xref_id":"0008179"}}}


id: GO:1901915
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of capsule organization.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular component organization","termid":"GO:0051130"},{"relation_name":"is_a","term_name":"regulation of capsule organization","termid":"GO:1901913"},{"relation_name":"positively_regulates","term_name":"capsule organization","termid":"GO:0045230"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of capsule organization","synonyms":[{"name":"activation of capsule organisation","type":"narrow"},{"name":"activation of capsule organization","type":"narrow"},{"name":"activation of capsule organization and biogenesis","type":"related"},{"name":"positive regulation of capsule organisation","type":"exact"},{"name":"positive regulation of capsule organization and biogenesis","type":"related"},{"name":"up regulation of capsule organisation","type":"exact"},{"name":"up regulation of capsule organization","type":"exact"},{"name":"up regulation of capsule organization and biogenesis","type":"related"},{"name":"up-regulation of capsule organisation","type":"exact"},{"name":"up-regulation of capsule organization","type":"exact"},{"name":"up-regulation of capsule organization and biogenesis","type":"related"},{"name":"upregulation of capsule organisation","type":"exact"},{"name":"upregulation of capsule organization","type":"exact"},{"name":"upregulation of capsule organization and biogenesis","type":"related"}],"termid":"GO:1901915"}


id: FYPO:0002606
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which histone H2A phosphorylation occurs to a greater extent than normal at ribosomal DNA during S phase of the mitotic cell cycle. All histone H2A phosphorylation may be affected, or phosphorylation of specific sites on histone H2A may be increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone H2A phosphorylation at rDNA during vegetative growth","termid":"FYPO:0002604"},{"relation_name":"is_a","term_name":"increased protein phosphorylation during mitotic S phase","termid":"FYPO:0004353"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0002274","FYPO:0000002","FYPO:0002494"],"is_obsolete":false,"name":"increased histone H2A phosphorylation at rDNA during mitotic S phase","synonyms":[{"name":"increased histone H2A phosphorylation at rDNA during mitotic S phase during vegetative growth","type":"exact"},{"name":"increased histone H2A phosphorylation at ribosomal DNA during mitotic S phase","type":"exact"}],"termid":"FYPO:0002606"}


id: MONDO:0017714
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of fatty acid oxidation and ketogenesis","termid":"MONDO:0017713"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002525"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0002525"],"is_obsolete":false,"name":"acyl-CoA dehydrogenase deficiency","secondary_identifiers":["MEDGEN:541378","SCTID:82319005","UMLS:C0268635","GARD:21318","Orphanet:309120"],"termid":"MONDO:0017714","xrefs":{"Monarch":{"xref_id":"0017714"}}}


id: GO:0035768
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of an endothelial cell in response to the presence of fibroblast growth factor (FGF).","definition_xrefs":["CL:0000115","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell chemotaxis to fibroblast growth factor","termid":"GO:0035766"},{"relation_name":"is_a","term_name":"endothelial cell chemotaxis","termid":"GO:0035767"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"endothelial cell chemotaxis to fibroblast growth factor","termid":"GO:0035768"}


id: PBO:0080878
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"YPEL3 divergent transcript","termid":"PBO:0080878"}


id: PBO:0081497
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 395","termid":"PBO:0081497"}


id: PBO:0052616
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kringle containing transmembrane protein 1","termid":"PBO:0052616"}


id: FYPO:0002104
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell has a normal shape and is viable.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell shape","termid":"FYPO:0001125"},{"relation_name":"is_a","term_name":"viable vegetative cell","termid":"FYPO:0001491"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000004","FYPO:0000257","FYPO:0000002","FYPO:0001320","FYPO:0001312"],"is_obsolete":false,"name":"viable vegetative cell with normal cell shape","synonyms":[{"name":"viable cell with normal cell shape during vegetative growth","type":"exact"},{"name":"viable vegetative cell with normal cell shape during mitotic cell cycle","type":"related"}],"termid":"FYPO:0002104"}


id: GO:0051323
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell cycle phase, following prophase or prometaphase in higher eukaryotes, during which chromosomes become aligned on the equatorial plate of the cell.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic cell cycle phase","termid":"GO:0098762"},{"relation_name":"part_of","term_name":"M phase","termid":"GO:0000279"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metaphase","secondary_identifiers":["Wikipedia:Metaphase"],"termid":"GO:0051323"}


id: PBO:0039826
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP ribosylation factor related protein 1","termid":"PBO:0039826"}


id: PBO:0091994
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytosine deaminase","termid":"PBO:0091994"}


id: PBO:0080797
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exportin 1","termid":"PBO:0080797"}


id: MONDO:0007731
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete HLA modifier (obsolete MONDO:0007731)","secondary_identifiers":["OMIM:142770"],"synonyms":[{"name":"HLA modifier","type":"related"}],"termid":"MONDO:0007731","xrefs":{"Monarch":{"xref_id":"0007731"}}}


id: MONDO:0002756
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A solitary plasmacytoma that arises from the chest wall.","definition_xrefs":["NCIT:C6711"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune system cancer","termid":"MONDO:0000621"},{"relation_name":"is_a","term_name":"chest wall lymphoma","termid":"MONDO:0003985"},{"relation_name":"is_a","term_name":"plasmacytoma","termid":"MONDO:0005615"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"solitary plasmacytoma of chest wall","secondary_identifiers":["DOID:3723","MEDGEN:232340","UMLS:C1332936"],"synonyms":[{"name":"chest wall plasmacytoma","type":"exact"},{"name":"chest wall solitary plasmacytoma","type":"exact"},{"name":"plasmacytoma of chest wall","type":"exact"},{"name":"solitary plasmacytoma of chest wall","type":"exact"},{"name":"solitary plasmacytoma of the chest wall","type":"exact"}],"termid":"MONDO:0002756","xrefs":{"Monarch":{"xref_id":"0002756"}}}


id: GO:0034162
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by a ligand binding to the endolysosomal toll-like receptor 9.","definition_xrefs":["PMID:17328678","GOC:add","PMID:16551253"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endolysosomal toll-like receptor signaling pathway","termid":"GO:0140894"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"toll-like receptor 9 signaling pathway","secondary_identifiers":["Reactome:R-HSA-168138"],"synonyms":[{"name":"TLR9 signaling pathway","type":"exact"},{"name":"toll-like receptor 9 signalling pathway","type":"exact"}],"termid":"GO:0034162"}


id: PR:O74378
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 2-oxoglutarate dehydrogenase E1 component that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2-oxoglutarate dehydrogenase, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3H7.03c","secondary_identifiers":["UniProtKB:O74378"],"synonyms":[{"name":"2-oxoglutarate dehydrogenase complex component E1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"OGDC-E1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SPBC3H7.03c","type":"related"},{"name":"Spom972h-sucA","type":"exact"},{"name":"alpha-ketoglutarate dehydrogenase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74378"}


id: FYPO:0007868
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to a substance that inhibits actin polymerization. Cells stop growing (and may die) at a concentration of an actin polymerization inhibitor that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002683","FYPO:0001985","FYPO:0000003","FYPO:0000139"],"is_obsolete":false,"name":"sensitive to actin polymerization inhibitor","synonyms":[{"name":"sensitive to actin cytoskeleton damaging agent","type":"related"},{"name":"sensitive to actin polymerisation inhibitor","type":"exact"}],"termid":"FYPO:0007868"}


id: PBO:0086201
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that associates with mitochondrial ribosome; likely functions in cristae junction formation; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies","termid":"PBO:0086201"}


id: PR:Q9P4W7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An anaphase-promoting complex subunit 5 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01423","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anaphase-promoting complex subunit 5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC959.09c","secondary_identifiers":["UniProtKB:Q9P4W7"],"synonyms":[{"name":"20S cyclosome/APC complex protein apc5 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ANAPC5","type":"exact"}],"termid":"PR:Q9P4W7"}


id: PR:Q9HDT8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCP20C8.01c gene.","definition_xrefs":["UniProtKB:Q9HDT8","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0612 protein P20C8.01c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCP20C8.01c","synonyms":[{"name":"Spom972h-SPCP20C8.01c","type":"exact"}],"termid":"PR:Q9HDT8"}


id: MONDO:0000399
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete dyskinetic cerebral palsy (obsolete MONDO:0000399)","termid":"MONDO:0000399","xrefs":{"Monarch":{"xref_id":"0000399"}}}


id: MONDO:0015475
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare head and neck malformation (obsolete MONDO:0015475)","secondary_identifiers":["Orphanet:155832"],"termid":"MONDO:0015475","xrefs":{"Monarch":{"xref_id":"0015475"}}}


id: PBO:0080827
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"YY1 associated factor 2","termid":"PBO:0080827"}


id: MONDO:0013048
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any hereditary spastic paraplegia in which the cause of the disease is a mutation in the AP4M1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary spastic paraplegia","termid":"MONDO:0019064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"hereditary spastic paraplegia 50","secondary_identifiers":["MEDGEN:442869","NORD:1989","MESH:C567858","OMIM:612936","UMLS:C2752008","DOID:0110802","GARD:15592"],"synonyms":[{"name":"AP4M1 hereditary spastic paraplegia","type":"exact"},{"name":"SPG50","type":"exact"},{"name":"Spastic Paraplegia 50","type":"exact"},{"name":"autosomal recessive spastic paraplegia 50","type":"exact"},{"name":"cerebral palsy, spastic quadriplegic, 3","type":"related"},{"name":"cerebral palsy, spastic quadriplegic, 3, formerly","type":"related"},{"name":"hereditary spastic paraplegia caused by mutation in AP4M1","type":"exact"},{"name":"hereditary spastic paraplegia type 50","type":"exact"},{"name":"spastic paraplegia 50, autosomal recessive","type":"related"}],"termid":"MONDO:0013048","xrefs":{"Monarch":{"xref_id":"0013048"}}}


id: MONDO:0008187
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial panic disorder","termid":"MONDO:0031240"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"panic disorder 1","secondary_identifiers":["UMLS:C1868649","MEDGEN:401493","OMIM:167870"],"synonyms":[{"name":"PAND1","type":"exact"},{"name":"panic disorder","type":"related"},{"name":"panic disorder 1","type":"exact"},{"name":"panic disorder susceptibility locus, chromosome 13Q-related","type":"related"},{"name":"panic disorder syndrome 1","type":"exact"},{"name":"panic disorder with Joint laxity","type":"related"},{"name":"panic disorder with bladder conditions","type":"related"},{"name":"panic disorder, susceptibility to","type":"exact"}],"termid":"MONDO:0008187","xrefs":{"Monarch":{"xref_id":"0008187"}}}


id: PBO:0043927
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carnitine O-octanoyltransferase","termid":"PBO:0043927"}


id: PBO:0066328
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulator of calcineurin 2","termid":"PBO:0066328"}


id: PBO:0005071
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase Ria1 (predicted)","termid":"PBO:0005071"}


id: MONDO:0001872
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete vestibular nystagmus (obsolete MONDO:0001872)","secondary_identifiers":["DOID:14070","ICD9:379.54","SCTID:46888001"],"synonyms":[{"name":"Nystagmus associated with disorder of the vestibular system","type":"exact"},{"name":"obsolete vestibular nystagmus (disease)","type":"exact"},{"name":"vestibular nystagmus","type":"exact"}],"termid":"MONDO:0001872","xrefs":{"Monarch":{"xref_id":"0001872"}}}


id: GO:0005733
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete small nucleolar RNA (obsolete GO:0005733)","synonyms":[{"name":"small nucleolar RNA","type":"exact"},{"name":"snoRNA","type":"exact"}],"termid":"GO:0005733"}


id: PATO:0000776
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000776 memory value (obsolete PATO:0000776)","termid":"PATO:0000776"}


id: SOFP:linked_to
data:
  {"annotation_feature_type":"gene","cv_name":"feature_property","direct_ancestors":[{"relation_name":"is_a","term_name":"feature_property","termid":"SOFP:feature_property"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"linked_to","termid":"SOFP:linked_to"}


id: PR:O94552
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A fumarate hydratase, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04899","PANTHER:PTHR11444:SF1","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fumarate hydratase, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC18.18c","secondary_identifiers":["UniProtKB:O94552"],"synonyms":[{"name":"Fumarase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-FH","type":"exact"}],"termid":"PR:O94552"}


id: MONDO:1011686
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hematologic disorder, non-human animal","termid":"MONDO:1011319"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"contact activation defect, non-human animal","secondary_identifiers":["OMIA:000225"],"termid":"MONDO:1011686","xrefs":{"Monarch":{"xref_id":"1011686"}}}


id: MOD:01710
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a residue amino- or imino-hydrogen with one of the Applied Biosystems iTRAQ8plex reagent reporter+balance groups.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isotope tagged reagent N-acylated residue","termid":"MOD:01706"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iTRAQ8plex reporter+balance reagent N-acylated residue","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"}],"termid":"MOD:01710"}


id: PR:O74944
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA polymerase kappa that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR11076:SF12"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA polymerase kappa (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC553.07c","secondary_identifiers":["UniProtKB:O74944"],"synonyms":[{"name":"SPCC553.07c","type":"related"},{"name":"Spom972h-POLK","type":"exact"},{"name":"meiotically up-regulated gene 40 protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74944"}


id: GO:0090564
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the PEP-dependent, phosphoryl transfer-driven transport of substances across a membrane. The transport happens by catalysis of the reaction: protein S-phosphocysteine + glucose(out) = protein cysteine + glucose phosphate(in). This differs from primary and secondary active transport in that the solute is modified during transport.","definition_xrefs":["GOC:am"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-phosphocysteine-sugar phosphotransferase activity","termid":"GO:0090563"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0005215","GO:0022857","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"protein-phosphocysteine-glucose phosphotransferase system transporter activity","termid":"GO:0090564"}


id: GO:0030295
data:
  {"annotated_genes":["SJAG_03936","SJAG_04502","SJAG_00236","SJAG_02332","SJAG_00457","SJAG_03618","SJAG_01605","SJAG_00318","SJAG_00142","SJAG_01213","SJAG_02232","SJAG_03453","SJAG_04020","SJAG_02026","SJAG_01411","SJAG_04140","SJAG_02785","SJAG_00333","SJAG_03090","SJAG_00424","SJAG_03695","SJAG_04509","SJAG_04614","SJAG_05017","SJAG_01401","SJAG_03371","SJAG_03699","SJAG_04200","SJAG_02605","SJAG_01000","SJAG_03340","SJAG_02057","SJAG_00439","SJAG_04666"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[70521,70860,72544,73323,78811,89582,91673,99553,107513,111820,112868,116703],"is_not":false,"summary":null,"term":"GO:0030295"},{"annotations":[92505],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019912"},{"annotations":[80142,101987,74383,111587,117458,66376,70682,113350],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061575"},{"annotations":[92796,118754,109650,89597,105497,89804,91221,69341,91552,110927,75877,75883,88263],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043539"}]},"cv_name":"molecular_function","definition":"Binds to and increases the activity of a protein kinase, an enzyme which phosphorylates a protein.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activator activity","termid":"GO:0019209"},{"relation_name":"is_a","term_name":"protein kinase regulator activity","termid":"GO:0019887"}],"gene_count":34,"genes_by_uniquename":{"SJAG_00142":null,"SJAG_00236":null,"SJAG_00318":null,"SJAG_00333":null,"SJAG_00424":null,"SJAG_00439":null,"SJAG_00457":null,"SJAG_01000":null,"SJAG_01213":null,"SJAG_01401":null,"SJAG_01411":null,"SJAG_01605":null,"SJAG_02026":null,"SJAG_02057":null,"SJAG_02232":null,"SJAG_02332":null,"SJAG_02605":null,"SJAG_02785":null,"SJAG_03090":null,"SJAG_03340":null,"SJAG_03371":null,"SJAG_03453":null,"SJAG_03618":null,"SJAG_03695":null,"SJAG_03699":null,"SJAG_03936":null,"SJAG_04020":null,"SJAG_04140":null,"SJAG_04200":null,"SJAG_04502":null,"SJAG_04509":null,"SJAG_04614":null,"SJAG_04666":null,"SJAG_05017":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140677"}],"interesting_parent_ids":["GO:0098772","GO:0003674","GO:0030234","GO:0140677"],"is_obsolete":false,"name":"protein kinase activator activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0030295","terms_by_termid":{"GO:0019912":null,"GO:0030295":null,"GO:0043539":null,"GO:0061575":null}}


id: PBO:0074738
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 98","termid":"PBO:0074738"}


id: PBO:0068713
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4atac small nuclear 2, pseudogene","termid":"PBO:0068713"}


id: MONDO:0008726
data:
  {"annotated_genes":["SJAG_04270"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85979],"is_not":false,"summary":null,"term":"MONDO:0008726"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Antley-Bixler syndrome","termid":"MONDO:0008803"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04270":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497","MONDO:0006025"],"is_obsolete":false,"name":"Antley-Bixler syndrome with genital anomalies and disordered steroidogenesis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:16665","NCIT:C178415","MEDGEN:461449","Orphanet:63269","UMLS:C3150099","OMIM:201750"],"synonyms":[{"name":"ABS1","type":"related"},{"name":"Antley-Bixler syndrome with genital anomalies and disordered steroidogenesis","type":"exact"},{"name":"Antley-Bixler syndrome with genital anomaly and disorder of steroidogenesis","type":"exact"}],"termid":"MONDO:0008726","terms_by_termid":{"MONDO:0008726":null},"xrefs":{"Monarch":{"xref_id":"0008726"}}}


id: GO:0070096
data:
  {"annotated_genes":["SJAG_03416","SJAG_02361"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[59125,70369],"is_not":false,"summary":null,"term":"GO:0070096"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a mitochondrial outer membrane translocase complex.","definition_xrefs":["GOC:BHF","GOC:vk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"},{"relation_name":"part_of","term_name":"outer mitochondrial membrane organization","termid":"GO:0007008"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02361":null,"SJAG_03416":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0007005"},{"rel_name":"part_of","termid":"GO:0061024"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007005","GO:0061024","GO:0044085","GO:0008150","GO:0065003"],"is_obsolete":false,"name":"mitochondrial outer membrane translocase complex assembly","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null},"synonyms":[{"name":"TOM complex assembly","type":"exact"},{"name":"mitochondrion outer membrane translocase complex assembly","type":"exact"}],"termid":"GO:0070096","terms_by_termid":{"GO:0070096":null}}


id: MOD:01250
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that is produced by reaction of iodouridine monophosphate with an L-phenylalanine residue.","definition_xrefs":["Unimod:292#F","PubMed:11112526","PubMed:6540775","PubMed:11567090"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iodouridine monophosphate derivatized residue","termid":"MOD:00611"},{"relation_name":"is_a","term_name":"modified L-phenylalanine residue","termid":"MOD:00914"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iodouridine monophosphate derivatized phenylalanine","synonyms":[{"name":"Cross-link of (Iodo)-uracil MP with W,F,Y","type":"related"},{"name":"IodoU-AMP","type":"related"}],"termid":"MOD:01250"}


id: PBO:0063019
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phenylalanine hydroxylase","termid":"PBO:0063019"}


id: GO:0102805
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: codeine + 2-oxoglutarate + O2 = morphine + formaldehyde + succinate + CO2.","definition_xrefs":["RHEA:27413"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-oxoglutarate-dependent dioxygenase activity","termid":"GO:0016706"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"codeine O-demethylase activity","secondary_identifiers":["MetaCyc:RXN-8152","EC:1.14.11.32"],"termid":"GO:0102805"}


id: PBO:0001039
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally regulated by Atf1","termid":"PBO:0001039"}


id: GO:0019836
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cytolytic destruction of red blood cells, with the release of intracellular hemoglobin, in the host organism by a symbiont. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:add","UniProtKB-KW:KW-0354"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated cytolysis of host cell","termid":"GO:0001897"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated hemolysis of host erythrocyte","synonyms":[{"name":"haemolysis in host","type":"exact"},{"name":"hemolysin activity","type":"related"},{"name":"hemolysis by symbiont of host RBCs","type":"exact"},{"name":"hemolysis by symbiont of host erythrocytes","type":"exact"},{"name":"hemolysis by symbiont of host red blood cells","type":"exact"},{"name":"pathogenesis","type":"broad"},{"name":"regulation of cytolysis of host cells by symbiont","type":"exact"}],"termid":"GO:0019836"}


id: PBO:0003253
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tip elongation aberrant protein Tea4","termid":"PBO:0003253"}


id: GO:0001992
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulation of blood pressure mediated by the signaling molecule vasopressin. Vasopressin is produced in the hypothalamus, and affects vasoconstriction, and renal water transport.","definition_xrefs":["ISBN:0721643949","GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of systemic arterial blood pressure by hormone","termid":"GO:0001990"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of systemic arterial blood pressure by vasopressin","synonyms":[{"name":"blood pressure regulation by vasopressin","type":"exact"},{"name":"vasopressin control of blood pressure","type":"related"}],"termid":"GO:0001992"}


id: PBO:0075190
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear ribonucleoprotein polypeptide G pseudogene 2","termid":"PBO:0075190"}


id: MONDO:0008729
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenital adrenal hyperplasia due to 11 beta-hydroxylase (CYP11B1) deficiency is a rare form of congenital adrenal hyperplasia (CAH) characterized by glucocorticoid deficiency, hyperandrogenism, hypertension and virilization in females.","definition_xrefs":["Orphanet:90795"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reproductive system disorder","termid":"MONDO:0005039"},{"relation_name":"is_a","term_name":"congenital adrenal hyperplasia","termid":"MONDO:0018479"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002525"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0002525"],"is_obsolete":false,"name":"congenital adrenal hyperplasia due to 11-beta-hydroxylase deficiency","secondary_identifiers":["NANDO:2200372","NANDO:1200400","GARD:5658","icd11.foundation:791376680","MESH:C535978","NCIT:C131085","OMIM:202010","ICD9:277.6","MedDRA:10000002","SCTID:124214007","MEDGEN:82783","UMLS:C0268292"],"synonyms":[{"name":"11-Beta-Hydroxylase deficiency","type":"related"},{"name":"CAH due to 11-beta-hydroxylase deficiency","type":"exact"},{"name":"CYP11B1 deficiency","type":"exact"},{"name":"P450C11B1 deficiency","type":"related"},{"name":"adrenal hyperplasia 4","type":"related"},{"name":"adrenal hyperplasia IV","type":"related"},{"name":"adrenal hyperplasia hypertensive form","type":"related"},{"name":"adrenal hyperplasia, congenital, due to 11-beta-hydroxylase deficiency","type":"exact"},{"name":"adrenal hyperplasia, congenital, due to steroid 11-BETA-HYDROXYLASE deficiency","type":"related"},{"name":"adrenal hyperplasia, hypertensive form","type":"related"},{"name":"steroid 11-Beta-Hydroxylase deficiency","type":"related"}],"termid":"MONDO:0008729","xrefs":{"Monarch":{"xref_id":"0008729"}}}


id: RO:HOM0000008
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Homology that is defined by sharing of a set of developmental constraints, caused by locally acting self-regulatory mechanisms of differentiation, between individualized parts of the phenotype.","direct_ancestors":[{"relation_name":"is_a","term_name":"in_homology_relationship_with","termid":"RO:HOM0000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"in_biological_homology_relationship_with","synonyms":[{"name":"biological homologous to","type":"exact"},{"name":"transformational homology","type":"related"}],"termid":"RO:HOM0000008"}


id: FYPO:0003724
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of bis(5'-adenosyl)-hexaphosphatase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased catalytic activity","termid":"FYPO:0000663"},{"relation_name":"is_a","term_name":"abnormal bis(5'-adenosyl)-hexaphosphatase activity","termid":"FYPO:0003723"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000707","FYPO:0001985","FYPO:0000654","FYPO:0000661"],"is_obsolete":false,"name":"decreased bis(5'-adenosyl)-hexaphosphatase activity","synonyms":[{"name":"reduced bis(5'-adenosyl)-hexaphosphatase activity","type":"exact"}],"termid":"FYPO:0003724"}


id: GO:0018556
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2,3-dihydroxybenzenoid + O2 = H+ + distal extradiol ring cleavage. Substrates are 2,2',3-trihydroxybiphenyl (forms 2-hydroxy-6-oxo-6-(2-hydroxyphenyl)-hexa-2,4-dienoate) and 2,2',3-trihydroxydiphenylether (forms 2,3-hydroxy-6-oxo-6-(2-hydroxyphenyl)-hexa-2,4-dienoate).","definition_xrefs":["UM-BBD_enzymeID:e0032"],"gene_count":0,"genotype_count":0,"name":"obsolete 2,2',3-trihydroxybiphenyl dioxygenase activity (obsolete GO:0018556)","termid":"GO:0018556"}


id: GO:0006274
data:
  {"annotated_genes":["SJAG_00073","SJAG_04855","SJAG_00247"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102633],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071946"},{"annotations":[102638],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0071807"},{"annotations":[115408],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071170"},{"annotations":[93719],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071171"}]},"cv_name":"biological_process","definition":"The process in which DNA replication at a replication fork ceases; occurs when the replication fork reaches a specific termination site or when two replication forks meet.","definition_xrefs":["PMID:10209736","GOC:mah","PMID:12009298"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA metabolic process","termid":"GO:0006259"},{"relation_name":"part_of","term_name":"DNA-templated DNA replication","termid":"GO:0006261"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00073":null,"SJAG_00247":null,"SJAG_04855":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006260"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006259","GO:0006260","GO:0008150"],"is_obsolete":false,"name":"DNA replication termination","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0006274","terms_by_termid":{"GO:0071170":null,"GO:0071171":null,"GO:0071807":null,"GO:0071946":null}}


id: PBO:0038703
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ACTB pseudogene 16","termid":"PBO:0038703"}


id: FYPO:0007500
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which macroautophagy does not occur when the cell is subject to sulfur starvation.","definition_xrefs":["PomBase:mah","GO:0016236"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished macroautophagy","termid":"FYPO:0000380"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abolished macroautophagy during sulfur starvation","synonyms":[{"name":"abolished macroautophagy during cellular response to sulfur starvation","type":"exact"},{"name":"abolished macroautophagy during sulfur depletion","type":"exact"},{"name":"abolished macroautophagy during sulfur deprivation","type":"exact"},{"name":"abolished macroautophagy during sulphur starvation","type":"exact"},{"name":"macroautophagy abolished during sulfur starvation","type":"exact"}],"termid":"FYPO:0007500"}


id: GO:0001829
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires the specialized features of a trophectoderm cell.","definition_xrefs":["ISBN:0124020607","ISBN:0198542771","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"},{"relation_name":"part_of","term_name":"blastocyst formation","termid":"GO:0001825"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"trophectodermal cell differentiation","synonyms":[{"name":"trophectoderm cell differentiation","type":"exact"}],"termid":"GO:0001829"}


id: MONDO:0004759
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"paraphilic disorder","termid":"MONDO:0000596"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zoophilia","secondary_identifiers":["ICD9:302.1","MEDGEN:508916","DOID:9336","SCTID:81463002","UMLS:C0152186"],"synonyms":[{"name":"bestiality","type":"exact"},{"name":"zoophilia","type":"exact"}],"termid":"MONDO:0004759","xrefs":{"Monarch":{"xref_id":"0004759"}}}


id: SO:0005845
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An exon that is the only exon in a gene.","definition_xrefs":["RSC:cb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"exon","termid":"SO:0000147"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exon_of_single_exon_gene","synonyms":[{"name":"exon of single exon gene","type":"exact"},{"name":"single_exon","type":"related"},{"name":"singleton exon","type":"exact"}],"termid":"SO:0005845"}


id: MONDO:1011173
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Osteochondrosis that occurs in horse.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"osteochondrosis, non-human animal","termid":"MONDO:1010299"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"osteochondrosis, horse","secondary_identifiers":["OMIA:000750-9796"],"termid":"MONDO:1011173","xrefs":{"Monarch":{"xref_id":"1011173"}}}


id: PBO:0088129
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Vacuolar membrane protein involved with Npc2p in sterol trafficking; transits through the biosynthetic vacuolar protein sorting pathway, involved in sphingolipid metabolism; cells lacking Ncr1p exhibit high levels of long chain bases (LCB), similar to the accumulation of high amounts of lipids observed in patients with Neimann-Pick C, a disease caused by loss-of-function mutations in NPC1, the functional ortholog of Ncr1p","termid":"PBO:0088129"}


id: PBO:0024819
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"promoter contains PCB","termid":"PBO:0024819"}


id: GO:0140914
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed import of zinc(2+) from the cytosol, across an organelle membrane, into a secretory vesicle.","definition_xrefs":["PMID:19496757"],"direct_ancestors":[{"relation_name":"is_a","term_name":"zinc ion import into organelle","termid":"GO:0062111"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0006810","GO:0055085","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"zinc ion import into secretory vesicle","termid":"GO:0140914"}


id: MONDO:0015323
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete syndrome or malformation associated with head and neck malformations (obsolete MONDO:0015501)","termid":"MONDO:0015501"}],"gene_count":0,"genotype_count":0,"name":"obsolete teratogenic Pierre Robin syndrome (obsolete MONDO:0015323)","secondary_identifiers":["Orphanet:138059"],"synonyms":[{"name":"teratogenic Pierre Robin sequence","type":"exact"}],"termid":"MONDO:0015323","xrefs":{"Monarch":{"xref_id":"0015323"}}}


id: PBO:0044153
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CTDNEP1 pseudogene 2","termid":"PBO:0044153"}


id: PR:Q09806
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC2G11.04 gene.","definition_xrefs":["UniProtKB:Q09806","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C2G11.04 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC2G11.04","synonyms":[{"name":"Spom972h-SPAC2G11.04","type":"exact"}],"termid":"PR:Q09806"}


id: GO:0070908
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: tyrosine(out) + tyramine(in) = tyrosine(in) + tyramine(out).","definition_xrefs":["GOC:dh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-tyrosine transmembrane transporter activity","termid":"GO:0005302"},{"relation_name":"is_a","term_name":"monoamine transmembrane transporter activity","termid":"GO:0008504"},{"relation_name":"is_a","term_name":"antiporter activity","termid":"GO:0015297"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"tyrosine:tyramine antiporter activity","synonyms":[{"name":"tyrosine-tyramine antiporter activity","type":"exact"},{"name":"tyrosine/tyramine antiporter activity","type":"exact"}],"termid":"GO:0070908"}


id: PBO:0115007
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"copper-binding protein involved in respiratory complex assembly Cmc2","termid":"PBO:0115007"}


id: GO:2000442
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of toll-like receptor 15 signaling pathway.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of pattern recognition receptor signaling pathway","termid":"GO:0062208"},{"relation_name":"is_a","term_name":"regulation of toll-like receptor 15 signaling pathway","termid":"GO:2000440"},{"relation_name":"positively_regulates","term_name":"toll-like receptor 15 signaling pathway","termid":"GO:0035681"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of toll-like receptor 15 signaling pathway","synonyms":[{"name":"positive regulation of TLR15 signaling pathway","type":"exact"},{"name":"positive regulation of toll-like receptor 15 signalling pathway","type":"exact"}],"termid":"GO:2000442"}


id: PBO:0042088
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 157","termid":"PBO:0042088"}


id: GO:0099070
data:
  {"annotated_genes":["SJAG_02737","SJAG_02761","SJAG_04841","SJAG_02624","SJAG_03540","SJAG_03264","SJAG_03073","SJAG_01196"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[97635,100741,101794,113150,114427,117323,118528,119042],"is_not":false,"summary":null,"term":"GO:0099070"}]},"cv_name":"cellular_component","definition":"A microtubule bundle that has a constant length, and in which microtubule sliding does not take place.","definition_xrefs":["GOC:vw","PMID:26124291"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule bundle","termid":"GO:0097427"}],"gene_count":8,"genes_by_uniquename":{"SJAG_01196":null,"SJAG_02624":null,"SJAG_02737":null,"SJAG_02761":null,"SJAG_03073":null,"SJAG_03264":null,"SJAG_03540":null,"SJAG_04841":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"static microtubule bundle","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"Q-MT bundle","type":"narrow"},{"name":"quiescent cell MT bundle","type":"narrow"},{"name":"quiescent cell microtubule bundle","type":"narrow"}],"termid":"GO:0099070","terms_by_termid":{"GO:0099070":null}}


id: PBO:0080471
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vesicle transport through interaction with t-SNAREs 1B pseudogene 2","termid":"PBO:0080471"}


id: PBO:0056742
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meteorin like, glial cell differentiation regulator","termid":"PBO:0056742"}


id: MONDO:1011095
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hypospadias that occurs in sheep.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypospadias, non-human animal","termid":"MONDO:1010269"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypospadias, sheep","secondary_identifiers":["OMIA:001187-9940"],"termid":"MONDO:1011095","xrefs":{"Monarch":{"xref_id":"1011095"}}}


id: GO:1990538
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + a xylan= CoA + an acetylated xylan.","definition_xrefs":["PMID:25141999"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-acetyltransferase activity","termid":"GO:0016413"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0016746","GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"xylan O-acetyltransferase activity","termid":"GO:1990538"}


id: GO:0097198
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H3 by addition of three methyl groups to lysine at position 36 of the histone.","definition_xrefs":["GOC:se","PMID:17948059"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H3-K36 trimethylation (obsolete GO:0097198)","termid":"GO:0097198"}


id: PR:000050517
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A SNF1-like protein kinase ssp2 (Schizosaccharomyces pombe) that has been phosphorylated at the position equivalent to Thr-189 of the amino acid sequence represented by UniProtKB:O74536. Example: UniProtKB:O74536, Thr-189, MOD:00047.","definition_xrefs":["PMID:22375066","PomBase:VW","PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SNF1-like protein kinase ssp2 (Schizosaccharomyces pombe)","termid":"PR:000050516"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ssp2/Phos(T189)","pombase_gene_id":"SPCC74.03c","synonyms":[{"name":"PomBase_original_PRO_term_name: SNF1-like protein kinase ssp2 phosphorylated 1 (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-ssp2/Phos:1","type":"exact"},{"name":"UniProtKB:O74536, Thr-189, MOD:00047","type":"narrow"},{"name":"ssp2/Phos(T189)","type":"exact"}],"termid":"PR:000050517"}


id: PBO:0039274
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ALG1 chitobiosyldiphosphodolichol beta-mannosyltransferase like 2","termid":"PBO:0039274"}


id: PBO:0044529
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dishevelled binding antagonist of beta catenin 3","termid":"PBO:0044529"}


id: PBO:0067471
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 601, pseudogene","termid":"PBO:0067471"}


id: PBO:0047144
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 178 member B","termid":"PBO:0047144"}


id: PBO:0076546
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TatD DNase domain containing 1","termid":"PBO:0076546"}


id: GO:0042274
data:
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id: PBO:0046580
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id: PBO:0054638
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id: GO:1903313
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id: PBO:0058856
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id: PBO:0001838
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id: MONDO:0033482
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id: PATO:0000471
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id: PBO:0063178
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id: GO:1901701
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id: PBO:0073651
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id: GO:0003213
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id: PBO:0051748
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id: PBO:0068051
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id: GO:1990800
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id: PBO:0030357
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id: PBO:0076904
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id: GO:0034014
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id: PR:Q10219
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id: GO:0050281
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-serine + glyoxylate = 3-hydroxypyruvate + glycine.","definition_xrefs":["EC:2.6.1.45"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016769","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"L-serine-glyoxylate transaminase activity","secondary_identifiers":["RHEA:19125","MetaCyc:SERINE--GLYOXYLATE-AMINOTRANSFERASE-RXN"],"synonyms":[{"name":"L-serine:glyoxylate aminotransferase activity","type":"related"},{"name":"SGAT activity","type":"related"},{"name":"serine--glyoxylate aminotransferase activity","type":"exact"}],"termid":"GO:0050281"}


id: MONDO:0014951
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal recessive non-syndromic intellectual disability in which the cause of the disease is a mutation in the APC2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"Sotos syndrome","termid":"MONDO:0019349"},{"relation_name":"is_a","term_name":"autosomal recessive non-syndromic intellectual disability","termid":"MONDO:0019502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0037792","MONDO:0006025","MONDO:0005066"],"is_obsolete":false,"name":"intellectual developmental disorder, autosomal recessive 74","secondary_identifiers":["DOID:0112104","MEDGEN:934651","UMLS:C4310684","GARD:16208","OMIM:617169","DOID:0081218"],"synonyms":[{"name":"APC2 Sotos syndrome","type":"exact"},{"name":"SOTOS3","type":"exact"},{"name":"Sotos syndrome 3","type":"exact"},{"name":"Sotos syndrome caused by mutation in APC2","type":"exact"},{"name":"Sotos syndrome type 3","type":"exact"},{"name":"intellectual developmental disorder, autosomal recessive 74","type":"exact"}],"termid":"MONDO:0014951","xrefs":{"Monarch":{"xref_id":"0014951"}}}


id: PBO:0044262
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-X-C motif chemokine ligand 1","termid":"PBO:0044262"}


id: GO:0018250
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of peptidyl-dehydroalanine from either peptidyl-tyrosine by phenyl transfer, or from peptidyl-serine, which is coupled with the formation of 5-imidazolinone by the two neighboring residues, produces an 4-methylidene-imidazole-5-one active site of some amino acid ammonia-lyases; the 4-methylidene-imidazole-5-one, is formed autocatalytically by cyclization and dehydration of the sequence ASG.","definition_xrefs":["RESID:AA0181"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-dehydroalanine biosynthetic process from peptidyl-tyrosine or peptidyl-serine (obsolete GO:0018250)","synonyms":[{"name":"peptidyl-dehydroalanine anabolism from peptidyl-tyrosine or peptidyl-serine","type":"exact"},{"name":"peptidyl-dehydroalanine formation from peptidyl-tyrosine or peptidyl-serine","type":"exact"},{"name":"peptidyl-dehydroalanine synthesis from peptidyl-tyrosine or peptidyl-serine","type":"exact"}],"termid":"GO:0018250"}


id: FYPO:0001553
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which RNA processing is abnormal. RNA processing is the conversion of one or more primary RNA transcripts into one or more mature RNA molecules.","definition_xrefs":["PomBase:mah","GO:0006396"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleic acid metabolism phenotype during vegetative growth","termid":"FYPO:0001347"},{"relation_name":"is_a","term_name":"abnormal metabolic process during vegetative growth","termid":"FYPO:0001363"},{"relation_name":"is_a","term_name":"abnormal RNA metabolic process","termid":"FYPO:0004851"},{"relation_name":"is_a","term_name":"abnormal gene expression","termid":"FYPO:0006551"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0000294"],"is_obsolete":false,"name":"abnormal RNA processing","synonyms":[{"name":"abnormal RNA processing during mitotic cell cycle","type":"related"},{"name":"abnormal RNA processing during vegetative growth","type":"exact"}],"termid":"FYPO:0001553"}


id: MONDO:0011477
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any tooth agenesis in which the cause of the disease is a mutation in the PAX9 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tooth agenesis","termid":"MONDO:0005486"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tooth agenesis, selective, 3","secondary_identifiers":["MEDGEN:410035","GARD:18247","OMIM:604625","UMLS:C1970291","MESH:C567036"],"synonyms":[{"name":"PAX9 tooth agenesis","type":"exact"},{"name":"STHAG3","type":"related"},{"name":"hypodontia/oligodontia 3","type":"related"},{"name":"tooth agenesis caused by mutation in PAX9","type":"exact"},{"name":"tooth agenesis, selective, 3","type":"exact"},{"name":"tooth agenesis, selective, type 3","type":"exact"}],"termid":"MONDO:0011477","xrefs":{"Monarch":{"xref_id":"0011477"}}}


id: PBO:0072946
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small Cajal body-specific RNA 26B","termid":"PBO:0072946"}


id: FYPO:0003334
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the septin ring is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to cell cortex during vegetative growth","termid":"FYPO:0001402"},{"relation_name":"is_a","term_name":"normal protein localization to cytoskeleton during vegetative growth","termid":"FYPO:0003184"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001312","FYPO:0000138","FYPO:0000257"],"is_obsolete":false,"name":"normal protein localization to septin ring","synonyms":[{"name":"normal protein localisation to septin ring","type":"exact"},{"name":"normal protein localization to septin ring during mitotic cell cycle","type":"related"},{"name":"normal protein localization to septin ring during vegetative growth","type":"exact"}],"termid":"FYPO:0003334"}


id: PBO:0048967
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycosylphosphatidylinositol anchor attachment 1 pseudogene 2","termid":"PBO:0048967"}


id: GO:0030980
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of alpha-glucans.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucan catabolic process","termid":"GO:0009251"},{"relation_name":"is_a","term_name":"alpha-glucan metabolic process","termid":"GO:0030978"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"alpha-glucan catabolic process","synonyms":[{"name":"alpha-glucan breakdown","type":"exact"},{"name":"alpha-glucan catabolism","type":"exact"},{"name":"alpha-glucan degradation","type":"exact"}],"termid":"GO:0030980"}


id: PBO:0034711
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy associated lysophospholipase Atg15","termid":"PBO:0034711"}


id: GO:0050695
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: benzoylformate = benzaldehyde + CO2.","definition_xrefs":["MetaCyc:BENZOYLFORMATE-DECARBOXYLASE-RXN","EC:4.1.1.7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"benzoylformate decarboxylase activity","secondary_identifiers":["RHEA:23368","UM-BBD_reactionID:r1049"],"synonyms":[{"name":"benzoylformate carboxy-lyase (benzaldehyde-forming)","type":"related"},{"name":"benzoylformate carboxy-lyase activity","type":"related"},{"name":"phenylglyoxylate decarboxylase activity","type":"exact"}],"termid":"GO:0050695"}


id: PBO:0080577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WDR4 pseudogene 1","termid":"PBO:0080577"}


id: GO:0098855
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cation ion channel with a preference for K+ over Na+ ions, which is activated by membrane hyperpolarization, and consists of a tetramer of HCN family members. Some members of this family (HCN1, HCN2 and HCN4) are also activated when cAMP binds to their cyclic nucleotide binding domain (CNBD). Channel complexes of this family play an important role in the control of pacemaker activity in the heart.","definition_xrefs":["PMID:20829353"],"direct_ancestors":[{"relation_name":"is_a","term_name":"voltage-gated potassium channel complex","termid":"GO:0008076"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005575","GO:0005886","GO:0032991"],"is_obsolete":false,"name":"HCN channel complex","secondary_identifiers":["GO:1990746","GO:1990759"],"synonyms":[{"name":"HCN1 channel complex","type":"narrow"},{"name":"HCN2 channel complex","type":"narrow"},{"name":"HCN3 channel complex","type":"narrow"},{"name":"HCN4 channel complex","type":"narrow"},{"name":"K/Na hyperpolarization-activated channel 3 complex","type":"narrow"},{"name":"K/Na hyperpolarization-activated cyclic nucleotide-gated channel 1 complex","type":"narrow"},{"name":"K/Na hyperpolarization-activated cyclic nucleotide-gated channel 2 complex","type":"narrow"},{"name":"K/Na hyperpolarization-activated cyclic nucleotide-gated channel 4 complex","type":"narrow"},{"name":"K/Na hyperpolarization-activated cyclic nucleotide-gated channel complex","type":"exact"},{"name":"potassium/sodium hyperpolarization-activated channel 3 complex","type":"narrow"},{"name":"potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1 complex","type":"narrow"},{"name":"potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 2 complex","type":"narrow"},{"name":"potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 2 tetramer","type":"related"},{"name":"potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 4 complex","type":"narrow"},{"name":"potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 4 tetramer","type":"related"},{"name":"potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel complex","type":"exact"}],"termid":"GO:0098855"}


id: MONDO:0017557
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Madelung deformity","termid":"MONDO:0018154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"Madelung deformity, bilateral","secondary_identifiers":["icd11.foundation:1577029287","UMLS:C5437754","MEDGEN:1723370","Orphanet:295223"],"termid":"MONDO:0017557","xrefs":{"Monarch":{"xref_id":"0017557"}}}


id: MONDO:0021574
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited oocyte maturation defect","termid":"MONDO:0014769"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"oocyte maturation defect 3","secondary_identifiers":["OMIM:617712","UMLS:C4540205","MEDGEN:1617317"],"synonyms":[{"name":"OOMD3","type":"exact"},{"name":"oocyte maturation defect 3","type":"exact"}],"termid":"MONDO:0021574","xrefs":{"Monarch":{"xref_id":"0021574"}}}


id: MONDO:0001440
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"keratoconjunctivitis","termid":"MONDO:0004768"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"neurotrophic keratoconjunctivitis","secondary_identifiers":["MEDGEN:509777","ICD9:370.35","SCTID:77080005","DOID:12125","UMLS:C0155084"],"termid":"MONDO:0001440","xrefs":{"Monarch":{"xref_id":"0001440"}}}


id: MOD:01792
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an N-terminal O4'-phospho-L-tyrosine residue to tyrosine immonium ion.","definition_xrefs":["PubMed:18688235","PubMed:17690871"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"O4'-phospho-L-tyrosine","termid":"MOD:00048"},{"relation_name":"is_a","term_name":"modified L-tyrosine residue","termid":"MOD:00919"},{"relation_name":"is_a","term_name":"residue reporter fragment","termid":"MOD:01527"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphotyrosine immonium ion","synonyms":[{"name":"2-(4-phosphonoxyphenyl)ethaniminium","type":"exact"}],"termid":"MOD:01792"}


id: PBO:0050719
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family D (Hsp60) member 1 pseudogene 5","termid":"PBO:0050719"}


id: PBO:0051548
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 7 receptor","termid":"PBO:0051548"}


id: GO:0072236
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the metanephric loop of Henle over time, from its formation to the mature structure. The metanephric loop of Henle is a metanephric nephron tubule that connects the proximal convoluted tubule to the distal convoluted tubule in the metanephros.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"loop of Henle development","termid":"GO:0072070"},{"relation_name":"is_a","term_name":"metanephric nephron tubule development","termid":"GO:0072234"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric loop of Henle development","synonyms":[{"name":"metanephric intermediate tubule development","type":"exact"}],"termid":"GO:0072236"}


id: PBO:0082900
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cyclin-like protein that interacts with Pho85p; has sequence similarity to G1 cyclins PCL1 and PCL2","termid":"PBO:0082900"}


id: MONDO:0020405
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"cleft mitral valve","termid":"MONDO:0019818"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"straddling and/or overriding mitral valve","secondary_identifiers":["GARD:19631","Orphanet:99064","UMLS:C5681625","MEDGEN:1842816"],"termid":"MONDO:0020405","xrefs":{"Monarch":{"xref_id":"0020405"}}}


id: PBO:0091822
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Arf3/6 docking factor","termid":"PBO:0091822"}


id: PBO:0063137
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"parvin beta","termid":"PBO:0063137"}


id: GO:1905784
data:
  {"annotated_genes":["SJAG_03048","SJAG_00071"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102721],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905785"},{"annotations":[89307],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905786"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of anaphase-promoting complex-dependent catabolic process.","definition_xrefs":["PMID:10921876","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of proteasomal ubiquitin-dependent protein catabolic process","termid":"GO:0032434"},{"relation_name":"regulates","term_name":"anaphase-promoting complex-dependent catabolic process","termid":"GO:0031145"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00071":null,"SJAG_03048":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0030163"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0030163","GO:0008150"],"is_obsolete":false,"name":"regulation of anaphase-promoting complex-dependent catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-176408"],"termid":"GO:1905784","terms_by_termid":{"GO:1905785":null,"GO:1905786":null}}


id: PR:Q10432
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ccq1 gene.","definition_xrefs":["UniProtKB:Q10432","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil quantitatively-enriched protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC188.07","synonyms":[{"name":"SMC protein ccq1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ccq1","type":"exact"},{"name":"structural maintenance of chromosomes protein ccq1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q10432"}


id: GO:0018232
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of peptidyl-glutamine and peptidyl-cysteine to form a S-(L-isoglutamyl)-L-cysteine protein cross-link.","definition_xrefs":["RESID:AA0108"],"gene_count":0,"genotype_count":0,"name":"obsolete peptide cross-linking via S-(L-isoglutamyl)-L-cysteine (obsolete GO:0018232)","termid":"GO:0018232"}


id: PBO:0075731
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal recognition particle 14","termid":"PBO:0075731"}


id: PBO:0084255
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Inositol monophosphatase; involved in biosynthesis of inositol; enzymatic activity requires magnesium ions and is inhibited by lithium and sodium ions; inm1 inm2 double mutant lacks inositol auxotrophy","termid":"PBO:0084255"}


id: PBO:0065209
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-mRNA processing factor 40 homolog A","termid":"PBO:0065209"}


id: FYPO:0003046
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which heterochromatin is assembled over a larger region near the centromere than normal, such that it extends beyond the IRC3L boundary element.","definition_xrefs":["PomBase:mah","PMID:24013502"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased spatial extent of centromeric heterochromatin assembly","termid":"FYPO:0004948"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0000641"],"is_obsolete":false,"name":"heterochromatin assembly beyond boundary element IRC3L","synonyms":[{"name":"heterochromatin assembly beyond boundary element IRC3L during mitotic cell cycle","type":"related"},{"name":"heterochromatin assembly beyond boundary element IRC3L during vegetative growth","type":"exact"},{"name":"heterochromatin formation beyond boundary element IRC3L","type":"exact"}],"termid":"FYPO:0003046"}


id: GO:0034010
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-sulfolactate = pyruvate + sulfite.","definition_xrefs":["EC:4.4.1.24","RHEA:21428"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-sulfur lyase activity","termid":"GO:0016846"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"sulfolactate sulfo-lyase activity","secondary_identifiers":["MetaCyc:RXN-11691","KEGG_REACTION:R07633"],"synonyms":[{"name":"3-sulfolactate bisulfite-lyase (pyruvate-forming) activity","type":"related"},{"name":"3-sulfolactate bisulfite-lyase activity","type":"related"},{"name":"Suy","type":"related"},{"name":"SuyAB","type":"related"}],"termid":"GO:0034010"}


id: PBO:0090557
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA (guanine-N2-)-methyltransferase catalytic subunit Trm11","termid":"PBO:0090557"}


id: PBO:0002591
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"succinate dehydrogenase subunit Emi5 (predicted)","termid":"PBO:0002591"}


id: PBO:0068029
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 334","termid":"PBO:0068029"}


id: MONDO:0000631
data:
  {"annotated_genes":["SJAG_02855"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85701],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010621"}]},"cv_name":"mondo","definition":"A neoplasm that arises from the bone or articular cartilage and does not invade adjacent tissues or metastasize to other anatomic sites.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benign connective and soft tissue neoplasm","termid":"MONDO:0000654"},{"relation_name":"is_a","term_name":"bone neoplasm","termid":"MONDO:0019060"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02855":null},"genotype_count":0,"is_obsolete":false,"name":"bone benign neoplasm","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["ICD9:213.9","MEDGEN:146337","SCTID:92027006","UMLS:C0684516","NCIT:C4880","DOID:0060094"],"synonyms":[{"name":"benign bone neoplasm","type":"exact"},{"name":"benign bone tumor","type":"exact"},{"name":"benign bone tumour","type":"exact"},{"name":"benign neoplasm of bone","type":"exact"},{"name":"benign neoplasm of the bone","type":"exact"},{"name":"benign osseous neoplasm","type":"exact"},{"name":"benign osseous tumor","type":"exact"},{"name":"benign osseous tumour","type":"exact"},{"name":"benign tumor of bone","type":"exact"},{"name":"benign tumor of the bone","type":"exact"},{"name":"benign tumour of bone","type":"exact"},{"name":"benign tumour of the bone","type":"exact"},{"name":"bone tissue benign neoplasm","type":"exact"}],"termid":"MONDO:0000631","terms_by_termid":{"MONDO:0010621":null},"xrefs":{"Monarch":{"xref_id":"0000631"}}}


id: GO:0120147
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: A [sulfatase]-L-cysteine + O2 + 2 a thiol = a [sulfatase]-3-oxo-L-alanine + hydrogen sulfide + a disulfide + H2O.","definition_xrefs":["RHEA:51152","EC:1.8.3.7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor","termid":"GO:0016670"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"formylglycine-generating oxidase activity","secondary_identifiers":["MetaCyc:RXN-16226"],"termid":"GO:0120147"}


id: GO:1902041
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of extrinsic apoptotic signaling pathway via death domain receptors.","definition_xrefs":["PMID:17245429","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of extrinsic apoptotic signaling pathway","termid":"GO:2001236"},{"relation_name":"regulates","term_name":"extrinsic apoptotic signaling pathway via death domain receptors","termid":"GO:0008625"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of extrinsic apoptotic signaling pathway via death domain receptors","secondary_identifiers":["Reactome:R-HSA-3371378"],"synonyms":[{"name":"regulation of death receptor-mediated apoptosis","type":"narrow"}],"termid":"GO:1902041"}


id: PBO:0030323
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_oleoyl-CoA_ligase_activity","termid":"PBO:0030323"}


id: GO:1990196
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The MacAB-TolC complex is a macrolide transporter complex found in E.coli and related gram-negative bacteria. Its transport activity is specific to macrolide compounds containing 14- and 15-membered lactones. It consists of the dimeric inner membrane ATPase MacB, the hexameric, periplasmic membrane fusion protein MacA and the trimeric outer membrane factor TolC.","definition_xrefs":["GOC:bhm","PMID:18955484","PMID:10879525","PMID:19254725"],"direct_ancestors":[{"relation_name":"is_a","term_name":"macrolide transmembrane transporter complex","termid":"GO:1990195"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"MacAB-TolC complex","synonyms":[{"name":"macrolide transporter MacAB-TolC complex","type":"exact"}],"termid":"GO:1990196"}


id: PBO:0056697
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiosis initiator","termid":"PBO:0056697"}


id: GO:0097633
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the phagophore assembly site membrane consisting of the gene products and protein complexes having either part of their peptide sequence embedded in the hydrophobic region of the membrane or some other covalently attached group such as a GPI anchor that is similarly embedded in the membrane.","definition_xrefs":["GOC:mf"],"gene_count":0,"genotype_count":0,"name":"obsolete intrinsic component of phagophore assembly site membrane (obsolete GO:0097633)","synonyms":[{"name":"intrinsic to phagophore assembly site membrane","type":"narrow"}],"termid":"GO:0097633"}


id: PBO:0056668
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit 28 pseudogene 6","termid":"PBO:0056668"}


id: GO:0052019
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The alteration by an organism of the levels of hormones or growth regulators in the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by symbiont of host hormone or growth regulator levels (obsolete GO:0052019)","synonyms":[{"name":"modulation by organism of hormone or growth regulator levels in other organism involved in symbiotic interaction","type":"broad"}],"termid":"GO:0052019"}


id: FYPO:0005168
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of protein measured in a cell during a cellular response to salt stress is normal (i.e. indistinguishable from wild type). Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein level during vegetative growth","termid":"FYPO:0000833"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0001312","FYPO:0001320"],"is_obsolete":false,"name":"normal protein level during cellular response to salt stress","synonyms":[{"name":"normal protein accumulation during cellular response to salt stress","type":"related"},{"name":"normal protein level during cellular response to salt stress during mitotic cell cycle","type":"related"},{"name":"normal protein level during cellular response to salt stress during vegetative growth","type":"exact"}],"termid":"FYPO:0005168"}


id: PBO:0084183
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Histone deacetylase and subunit of Set3 and Rpd3L complexes; required for gene activation via specific deacetylation of lysines in H3 and H4 histone tails; subunit of the Set3 complex, a meiotic-specific repressor of sporulation specific genes that contains deacetylase activity; co-localizes with Cmr1p in nuclear foci in response to DNA damage by MMS","termid":"PBO:0084183"}


id: PBO:0054861
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2275","termid":"PBO:0054861"}


id: PBO:0011512
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"merged with ncRNA SPNCRNA.64","termid":"PBO:0011512"}


id: PBO:0086135
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for meiotic recombination and gene conversion; null mutant displays reduced PIS1 expression and growth defects on non-fermentable carbon sources and minimal media; GFP-fusion protein localizes to both cytoplasm and nucleus","termid":"PBO:0086135"}


id: GO:0042780
data:
  {"annotated_genes":["SJAG_04885","SJAG_02288","SJAG_02993","SJAG_03761","SJAG_01704","SJAG_00997","SJAG_00195"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93390,98836,99301],"is_not":false,"summary":null,"term":"GO:0042780"},{"annotations":[70525,88092,118306,80716],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990180"},{"annotations":[75307,70675],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001680"}]},"cv_name":"biological_process","definition":"The process in which the 3' end of a pre-tRNA molecule is converted to that of a mature tRNA.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA processing","termid":"GO:0008033"},{"relation_name":"is_a","term_name":"RNA 3'-end processing","termid":"GO:0031123"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00195":null,"SJAG_00997":null,"SJAG_01704":null,"SJAG_02288":null,"SJAG_02993":null,"SJAG_03761":null,"SJAG_04885":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0006399","GO:0008150"],"is_obsolete":false,"name":"tRNA 3'-end processing","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"tRNA 3' processing","type":"exact"}],"termid":"GO:0042780","terms_by_termid":{"GO:0001680":null,"GO:0042780":null,"GO:1990180":null}}


id: PBO:0050027
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major histocompatibility complex, class II, DQ alpha 2","termid":"PBO:0050027"}


id: PBO:0053795
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1049","termid":"PBO:0053795"}


id: PBO:0083116
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA replication initiation factor; recruited to MCM pre-RC complexes at replication origins; promotes release of MCM from Mcm10p, recruits elongation machinery; binds tightly to ssDNA, which disrupts interaction with the MCM helicase and stalls it during replication stress; mutants in human homolog may cause velocardiofacial and DiGeorge syndromes","termid":"PBO:0083116"}


id: PBO:0027697
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_spindle_assembly_during_meiosis_II","termid":"PBO:0027697"}


id: PBO:0085481
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Probable multiple transmembrane protein; involved in diploid invasive and pseudohyphal growth upon nitrogen starvation; is glycosylated and phosphorylated; interacts with Rim21p and Rim9p in the plasma membrane to form a pH-sensing complex in the Rim101 pathway and is required to maintain Rim21p levels; required for accumulation of processed Rim101p","termid":"PBO:0085481"}


id: GO:0030561
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Specifies the site of 2'-O-ribose methylation in an RNA molecule by base pairing with a short sequence around the target residue.","definition_xrefs":["GOC:mah","PMID:12457565"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA modification guide activity","termid":"GO:0030555"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003723","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"RNA 2'-O-ribose methylation guide activity","termid":"GO:0030561"}


id: PBO:0043125
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium and integrin binding family member 3","termid":"PBO:0043125"}


id: MONDO:0019543
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acquired aneurysmal subarachnoid hemorrhage is a serious, life threatening rare neurologic disease characterized by a sudden rupture of an intracranial aneurysm into the subarachnoid space. It usually presents with a sudden, severe, excruciating headache accompanied by nausea, vomiting and syncope. Other features may include focal neurological signs, third and sixth nerve palsies, seizures and cardiac failure. Early complications include rebleeding, hydrocephalus, and seizures.","definition_xrefs":["Orphanet:90065"],"direct_ancestors":[{"relation_name":"is_a","term_name":"subarachnoid hemorrhage","termid":"MONDO:0005099"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acquired aneurysmal subarachnoid hemorrhage","secondary_identifiers":["GARD:19114","icd11.foundation:958976948","MEDGEN:572642","UMLS:C0338572"],"termid":"MONDO:0019543","xrefs":{"Monarch":{"xref_id":"0019543"}}}


id: PBO:0049536
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2A.Z histone pseudogene 7","termid":"PBO:0049536"}


id: GO:0039640
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The dissemination of mature viral particles from a host cell, caused by a virus stopping, preventing, or reducing peptidoglycan biosynthesis in the host organism. Peptidoglycans are any of a class of glycoconjugates found in bacterial cell walls.","definition_xrefs":["PMID:28894177","GOC:bf","GOC:bm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral release from host cell by cytolysis","termid":"GO:0044659"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"viral release via suppression of host peptidoglycan biosynthetic process","synonyms":[{"name":"cytolysis by virus via suppression of host peptidoglycan biosynthetic process","type":"related"},{"name":"viral exit by cytolysis via suppression of host peptidoglycan biosynthetic process","type":"exact"},{"name":"viral release by cytolysis via suppression of host peptidoglycan biosynthetic process","type":"exact"}],"termid":"GO:0039640"}


id: PBO:0082001
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger SWIM-type containing 2","termid":"PBO:0082001"}


id: FYPO:0003138
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the size, shape, or structure of the ascospore wall is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell wall morphology","termid":"FYPO:0002947"},{"relation_name":"output_of","term_name":"abnormal ascospore wall biogenesis","termid":"FYPO:0000580"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0000121"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002946"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000121","FYPO:0000631","FYPO:0005447","FYPO:0000002","FYPO:0002946","FYPO:0001985"],"is_obsolete":false,"name":"abnormal ascospore wall morphology","synonyms":[{"name":"abnormal spore wall morphology","type":"exact"},{"name":"abnormal spore wall organization","type":"related"}],"termid":"FYPO:0003138"}


id: GO:0008760
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: phosphoenolpyruvate + UDP-N-acetyl-alpha-D-glucosamine = phosphate + UDP-N-acetyl-3-O-(1-carboxyvinyl)-D-glucosamine.","definition_xrefs":["EC:2.5.1.7","RHEA:18681"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring alkyl or aryl (other than methyl) groups","termid":"GO:0016765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016765","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"UDP-N-acetylglucosamine 1-carboxyvinyltransferase activity","secondary_identifiers":["MetaCyc:UDPNACETYLGLUCOSAMENOLPYRTRANS-RXN","KEGG_REACTION:R00660"],"synonyms":[{"name":"MurA transferase activity","type":"narrow"},{"name":"UDP-N-acetylglucosamine 1-carboxyvinyl-transferase activity","type":"related"},{"name":"UDP-N-acetylglucosamine enoylpyruvyltransferase activity","type":"related"},{"name":"enoylpyruvate transferase activity","type":"related"},{"name":"phosphoenolpyruvate-UDP-acetylglucosamine-3-enolpyruvyltransferase activity","type":"related"},{"name":"phosphoenolpyruvate:UDP-2-acetamido-2-deoxy-D-glucose 2-enoyl-1-carboxyethyltransferase activity","type":"related"},{"name":"phosphoenolpyruvate:UDP-N-acetyl-D-glucosamine 1-carboxyvinyltransferase activity","type":"related"},{"name":"phosphoenolpyruvate:uridine diphosphate N-acetylglucosamine enolpyruvyltransferase activity","type":"related"},{"name":"phosphoenolpyruvate:uridine-5'-diphospho-N-acetyl-2-amino-2-deoxyglucose 3-enolpyruvyltransferase activity","type":"related"},{"name":"phosphopyruvate-uridine diphosphoacetylglucosamine pyruvatetransferase activity","type":"related"},{"name":"pyruvate-UDP-acetylglucosamine transferase activity","type":"related"},{"name":"pyruvate-uridine diphospho-N-acetyl-glucosamine transferase activity","type":"related"},{"name":"pyruvate-uridine diphospho-N-acetylglucosamine transferase activity","type":"related"},{"name":"pyruvic-uridine diphospho-N-acetylglucosaminyltransferase activity","type":"related"}],"termid":"GO:0008760"}


id: GO:0060061
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Formation of the specialized region on the dorsalmost side of the embryo that acts as the main signaling center establishing the vertebrate body plan.","definition_xrefs":["GOC:bf","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"developmental induction","termid":"GO:0031128"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"Spemann organizer formation","synonyms":[{"name":"Spemann's organizer formation","type":"exact"},{"name":"Spemann-Mangold organizer formation","type":"exact"}],"termid":"GO:0060061"}


id: MOD:01438
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to S-[2-(pyridin-2-yl)ethyl]-L-cysteine.","definition_xrefs":["PubMed:18688235","PubMed:18369855"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-pyridylethyl-L-cysteine","termid":"MOD:00424"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"S-[2-(pyridin-2-yl)ethyl]-L-cysteine","synonyms":[{"name":"2-PEC","type":"exact"},{"name":"2-vinylpyridine derivatized cysteine residue","type":"exact"},{"name":"Pyridylethyl","type":"related"},{"name":"Pyridylethyl Cystenyl","type":"exact"},{"name":"S-(pyridin-2-ylethyl)-L-cysteine","type":"exact"},{"name":"S-pyridylethylation","type":"related"}],"termid":"MOD:01438"}


id: GO:0070295
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A renal system process in which water is taken up from the collecting ducts and proximal and distal loops of the nephron. In non-mammalian species, absorption may occur in related structures.","definition_xrefs":["GOC:dph","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal water transport","termid":"GO:0003097"},{"relation_name":"is_a","term_name":"renal absorption","termid":"GO:0070293"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"renal water absorption","synonyms":[{"name":"nephron water absorption","type":"exact"},{"name":"renal water reabsorption","type":"exact"}],"termid":"GO:0070295"}


id: GO:0007543
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that mediates the interactions between somatic cells and gonadal cells that ultimately results in the specification of sexual status of the organism.","definition_xrefs":["GOC:isa_complete"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell communication","termid":"GO:0007154"},{"relation_name":"part_of","term_name":"primary sex determination, germ-line","termid":"GO:0007542"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sex determination, somatic-gonadal interaction","synonyms":[{"name":"sex determination, somatic/gonadal interaction","type":"exact"}],"termid":"GO:0007543"}


id: PBO:0065898
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB41, member RAS oncogene family","termid":"PBO:0065898"}


id: PBO:0087874
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcriptional modulator; involved in regulation of meiosis, silencing, and expression of RNR genes; involved in response to replication stress; contains WD repeats; relocalizes to the cytosol in response to hypoxia; WTM2 has a paralog, UME1, that arose from the whole genome duplication","termid":"PBO:0087874"}


id: SO:0000314
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A repeat where the same sequence is repeated in the same direction. Example: GCTGA-followed by-GCTGA.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"repeat_region","termid":"SO:0000657"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"direct_repeat","secondary_identifiers":["http://en.wikipedia.org/wiki/Direct_repeat"],"synonyms":[{"name":"INSDC_feature:repeat_region","type":"broad"},{"name":"INSDC_qualifier:direct","type":"exact"},{"name":"direct repeat","type":"exact"}],"termid":"SO:0000314"}


id: GO:0010656
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate or frequency of muscle cell apoptotic process, a form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases whose actions dismantle a muscle cell and result in its death.","definition_xrefs":["GOC:dph","GOC:tb","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of muscle cell apoptotic process","termid":"GO:0010660"},{"relation_name":"is_a","term_name":"negative regulation of apoptotic process","termid":"GO:0043066"},{"relation_name":"negatively_regulates","term_name":"muscle cell apoptotic process","termid":"GO:0010657"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of muscle cell apoptotic process","synonyms":[{"name":"negative regulation of muscle cell apoptosis","type":"narrow"}],"termid":"GO:0010656"}


id: PBO:0070760
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L10 pseudogene 16","termid":"PBO:0070760"}


id: MONDO:0007408
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cryptotia, familial","secondary_identifiers":["MEDGEN:342243","OMIM:123557","UMLS:C1852455","MESH:C565140"],"synonyms":[{"name":"cryptotia, familial","type":"exact"}],"termid":"MONDO:0007408","xrefs":{"Monarch":{"xref_id":"0007408"}}}


id: PBO:0045308
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA methyltransferase 3A pseudogene 1","termid":"PBO:0045308"}


id: MONDO:0012918
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any primary ciliary dyskinesia in which the cause of the disease is a mutation in the DNAAF2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary ciliary dyskinesia","termid":"MONDO:0016575"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"primary ciliary dyskinesia 10","secondary_identifiers":["OMIM:612518","MEDGEN:382707","UMLS:C2675867","GARD:15560","DOID:0110612","MESH:C567287"],"synonyms":[{"name":"CILD10","type":"exact"},{"name":"DNAAF2 primary ciliary dyskinesia","type":"exact"},{"name":"ciliary dyskinesia, primary, 10","type":"related"},{"name":"ciliary dyskinesia, primary, 10, with or without situs inversus","type":"related"},{"name":"ciliary dyskinesia, primary, type 10","type":"exact"},{"name":"primary ciliary dyskinesia 10 with or without situs inversus","type":"exact"},{"name":"primary ciliary dyskinesia caused by mutation in DNAAF2","type":"exact"},{"name":"primary ciliary dyskinesia type 10","type":"exact"}],"termid":"MONDO:0012918","xrefs":{"Monarch":{"xref_id":"0012918"}}}


id: PBO:0065162
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prion protein","termid":"PBO:0065162"}


id: GO:0045568
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of TRAIL (TNF-related apoptosis inducing ligand) receptor 2.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of TRAIL receptor 2 biosynthetic process (obsolete GO:0045568)","synonyms":[{"name":"activation of TRAIL receptor 2 biosynthetic process","type":"narrow"},{"name":"positive regulation of TRAIL receptor 2 anabolism","type":"exact"},{"name":"positive regulation of TRAIL receptor 2 biosynthesis","type":"exact"},{"name":"positive regulation of TRAIL receptor 2 formation","type":"exact"},{"name":"positive regulation of TRAIL receptor 2 synthesis","type":"exact"},{"name":"stimulation of TRAIL receptor 2 biosynthetic process","type":"narrow"},{"name":"up regulation of TRAIL receptor 2 biosynthetic process","type":"exact"},{"name":"up-regulation of TRAIL receptor 2 biosynthetic process","type":"exact"},{"name":"upregulation of TRAIL receptor 2 biosynthetic process","type":"exact"}],"termid":"GO:0045568"}


id: GO:0009956
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regionalization process that results in defined areas around a point in which specific types of cell differentiation will occur.","definition_xrefs":["GOC:isa_complete","GOC:dph","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regionalization","termid":"GO:0003002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"radial pattern formation","synonyms":[{"name":"radial pattern specification","type":"narrow"}],"termid":"GO:0009956"}


id: GO:0090010
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals initiated by an extracellular ligand binding to a transforming growth factor beta receptor on the surface of a target cell, which contributes to the formation of the primitive streak.","definition_xrefs":["GOC:sdb_2009","GOC:tb","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete transforming growth factor beta receptor signaling pathway involved in primitive streak formation (obsolete GO:0090010)","synonyms":[{"name":"TGFbeta signaling pathway involved in primitive streak formation","type":"related"},{"name":"transforming growth factor beta receptor signalling pathway involved in primitive streak formation","type":"exact"}],"termid":"GO:0090010"}


id: GO:0007419
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the ventral cord over time, from its formation to the mature structure. The ventral cord is one of the distinguishing traits of the central nervous system of all arthropods (such as insects, crustaceans and arachnids) as well as many other invertebrates, such as the annelid worms.","definition_xrefs":["GOC:bf","GOC:go_curators","PMID:30826502"],"direct_ancestors":[{"relation_name":"is_a","term_name":"animal organ development","termid":"GO:0048513"},{"relation_name":"part_of","term_name":"central nervous system development","termid":"GO:0007417"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ventral cord development","termid":"GO:0007419"}


id: MONDO:0001305
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Narrowing of the laryngeal airway.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"laryngeal disorder","termid":"MONDO:0004382"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"laryngostenosis","secondary_identifiers":["DOID:11527","ICD10CM:J38.6","SCTID:75547007","UMLS:C0023075","ICD9:478.74","MEDGEN:7274","MESH:D007829","HP:0001602"],"synonyms":[{"name":"stenosis of larynx","type":"exact"}],"termid":"MONDO:0001305","xrefs":{"Monarch":{"xref_id":"0001305"}}}


id: PBO:0068926
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 169, pseudogene","termid":"PBO:0068926"}


id: PBO:0090511
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unconventional prefoldin chaperone involved protein complex assembly Uri1","termid":"PBO:0090511"}


id: GO:0021506
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The joining together of the neural folds of the rostral opening of the neural tube. The anterior neuropore appears before the process of neural tube closure is complete.","definition_xrefs":["GOC:dgh","GOC:jid","GOC:dph","GOC:cls","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"morphogenesis of embryonic epithelium","termid":"GO:0016331"},{"relation_name":"part_of","term_name":"neuropore closure","termid":"GO:0021995"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anterior neuropore closure","termid":"GO:0021506"}


id: PBO:0071394
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L31","termid":"PBO:0071394"}


id: MONDO:0031697
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete genetic intractable diarrhea of infancy (obsolete MONDO:0031697)","secondary_identifiers":["Orphanet:363300"],"termid":"MONDO:0031697","xrefs":{"Monarch":{"xref_id":"0031697"}}}


id: MONDO:0011404
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Caronte","secondary_identifiers":["UMLS:C1858724","MEDGEN:349004","OMIM:604172"],"synonyms":[{"name":"Car","type":"related"},{"name":"Caronte","type":"exact"}],"termid":"MONDO:0011404","xrefs":{"Monarch":{"xref_id":"0011404"}}}


id: MONDO:0013887
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"visceral heterotaxy","termid":"MONDO:0018677"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterotaxy, visceral, 6, autosomal","secondary_identifiers":["OMIM:614779","UMLS:C3553676","MEDGEN:766590"],"synonyms":[{"name":"HTX6","type":"related"},{"name":"heterotaxy, visceral, 6, autosomal","type":"exact"},{"name":"heterotaxy, visceral, 6, autosomal recessive","type":"exact"}],"termid":"MONDO:0013887","xrefs":{"Monarch":{"xref_id":"0013887"}}}


id: PBO:0028113
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_G418","termid":"PBO:0028113"}


id: PBO:0056059
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich adaptor protein 1 like","termid":"PBO:0056059"}


id: PBO:0036047
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3-K14_acetylation_at_centromere_outer_repeat_during_vegetative_growth","termid":"PBO:0036047"}


id: MONDO:0003384
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A clear cell adenocarcinoma of the uterine ligament composed mainly of clear or hobnob cells. The clear cells are large, bizarre, and multinucleated.","definition_xrefs":["NCIT:C40139"],"direct_ancestors":[{"relation_name":"is_a","term_name":"uterine ligament adenocarcinoma","termid":"MONDO:0002741"},{"relation_name":"is_a","term_name":"cervical clear cell adenocarcinoma","termid":"MONDO:0006135"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"uterine ligament clear cell adenocarcinoma","secondary_identifiers":["DOID:5302"],"synonyms":[{"name":"uterine ligament clear cell adenocarcinoma","type":"exact"}],"termid":"MONDO:0003384","xrefs":{"Monarch":{"xref_id":"0003384"}}}


id: MONDO:0003528
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An ischemic contracture of the forearm that most often occurs secondary to trauma.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"connective tissue disorder","termid":"MONDO:0003900"},{"relation_name":"is_a","term_name":"skeletal muscle disorder","termid":"MONDO:0020120"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Volkmann contracture","secondary_identifiers":["NCIT:C35130","MESH:D054061","ICD9:958.6","MEDGEN:22684","SCTID:111247001","UMLS:C0042951","DOID:5587","icd11.foundation:366740140"],"synonyms":[{"name":"Volkmann's ischaemic contracture","type":"exact"},{"name":"Volkmann's ischemic contracture","type":"exact"}],"termid":"MONDO:0003528","xrefs":{"Monarch":{"xref_id":"0003528"}}}


id: MONDO:0054805
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive primary microcephaly","termid":"MONDO:0016660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0700092"],"is_obsolete":false,"name":"microcephaly 22, primary, autosomal recessive","secondary_identifiers":["MEDGEN:1635688","GARD:16279","UMLS:C4693834","OMIM:617984"],"synonyms":[{"name":"MCPH22","type":"related"},{"name":"microcephaly 22, PRIMARY, autosomal recessive","type":"related"}],"termid":"MONDO:0054805","xrefs":{"Monarch":{"xref_id":"0054805"}}}


id: GO:0018127
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: NAD(P)+ + L-serine = nicotinamide + N2-(ADP-D-ribosyl)-L-serine.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete NAD(P)-serine ADP-ribosyltransferase activity (obsolete GO:0018127)","termid":"GO:0018127"}


id: MONDO:0005204
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An antiphospholipid syndrome that occurs as an isolated disorder.","direct_ancestors":[{"relation_name":"is_a","term_name":"antiphospholipid syndrome","termid":"MONDO:8000010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"primary antiphospholipid syndrome","secondary_identifiers":["MEDGEN:592740","icd11.foundation:85700944","ICD9:795.79","NANDO:1200267","SCTID:239892009","UMLS:C0409980"],"termid":"MONDO:0005204","xrefs":{"Monarch":{"xref_id":"0005204"}}}


id: GO:0008783
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: agmatine + H2O = putrescine + urea.","definition_xrefs":["EC:3.5.3.11","RHEA:13929"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines","termid":"GO:0016813"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016810"}],"interesting_parent_ids":["GO:0016810","GO:0003674","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"agmatinase activity","secondary_identifiers":["MetaCyc:AGMATIN-RXN","Reactome:R-HSA-350604","KEGG_REACTION:R01157"],"synonyms":[{"name":"SpeB","type":"related"},{"name":"agmatine amidinohydrolase","type":"broad"},{"name":"agmatine ureohydrolase activity","type":"related"}],"termid":"GO:0008783"}


id: MONDO:0002543
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An oligodendroglioma occurring during adulthood.","definition_xrefs":["NCIT:C4014"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligodendroglioma","termid":"MONDO:0016695"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"adult oligodendroglioma","secondary_identifiers":["MEDGEN:75924","UMLS:C0279070","DOID:3186","NANDO:2200089"],"synonyms":[{"name":"adult brain oligodendroglioma","type":"narrow"},{"name":"adult oligodendroglioma","type":"exact"},{"name":"grade II adult oligodendroglial tumor","type":"exact"},{"name":"grade II adult oligodendroglial tumour","type":"exact"},{"name":"oligodendroglioma","type":"broad"},{"name":"oligodendroglioma of adults","type":"exact"}],"termid":"MONDO:0002543","xrefs":{"Monarch":{"xref_id":"0002543"}}}


id: GO:0000373
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The splicing of Group II introns. This occurs by a ribozymic mechanism where the intron sequence forms a distinct 3D structure, characteristic of Group II introns and containing splice site consensus sequences, that is involved in catalyzing the splicing reactions, though protein factors are also required in vivo. Splicing occurs by a series of two transesterification reactions (mechanistically similar to those for splicing of nuclear mRNAs) initiated by a bulged adenosine residue within the intron sequence as the initiating nucleophile. The intron is excised as a lariat.","definition_xrefs":["GOC:krc","PMID:11377794"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA splicing, via transesterification reactions with bulged adenosine as nucleophile","termid":"GO:0000377"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"Group II intron splicing","synonyms":[{"name":"mRNA splicing","type":"related"}],"termid":"GO:0000373"}


id: FYPO:0006692
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An inviable phenotype observed in the vegetative growth phase of the life cycle in which a cell undergoes septation despite abnormal mitotic sister chromatid separation, producing inviable daughter cells, and in which the septum forms so as to separate the nucleus into two unequal masses, each in one compartment.","definition_xrefs":["PomBase:mah","PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cut","termid":"FYPO:0000229"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000032"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"has_part","termid":"FYPO:0000337"},{"rel_name":"has_part","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000032"},{"rel_name":"has_part","termid":"FYPO:0000641"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000641","FYPO:0000337","FYPO:0000002","FYPO:0000631","FYPO:0000032","FYPO:0005447","FYPO:0001985","FYPO:0000004","FYPO:0001320"],"is_obsolete":false,"name":"cut with septum between unequally sized nuclei","synonyms":[{"name":"cut with septum between unequally sized nuclei during mitotic cell cycle","type":"related"},{"name":"cut with septum between unequally sized nuclei during vegetative growth","type":"exact"},{"name":"cut with unequally sized nuclei, one either side of septum","type":"exact"},{"name":"septation following abnormal mitotic sister chromatid segregation, with septum between unequally sized nuclei","type":"exact"}],"termid":"FYPO:0006692"}


id: MONDO:0021095
data:
  {"annotated_genes":["SJAG_16459","SJAG_02106","SJAG_02695","SJAG_00421","SJAG_01317","SJAG_04757","SJAG_00063","SJAG_03866","SJAG_03900","SJAG_02397","SJAG_04404","SJAG_04840","SJAG_00078","SJAG_01270","SJAG_01039","SJAG_04545","SJAG_01229"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86162,86161],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014796"},{"annotations":[86556,86555],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011658"},{"annotations":[86171,86170],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014233"},{"annotations":[87302,87301],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011706"},{"annotations":[87700,87701],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008199"},{"annotations":[87664],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013625"},{"annotations":[86751,86750],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0957576"},{"annotations":[86939],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0036193"},{"annotations":[87471],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030676"},{"annotations":[87113],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008201"},{"annotations":[86215],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010747"}]},"cv_name":"mondo","definition":"A group of disorders which feature impaired motor control characterized by bradykinesia, MUSCLE RIGIDITY; TREMOR; and postural instability. Parkinsonian diseases are generally divided into primary parkinsonism (see PARKINSON DISEASE), secondary parkinsonism (see PARKINSON DISEASE, SECONDARY) and inherited forms. These conditions are associated with dysfunction of dopaminergic or closely related motor integration neuronal pathways in the BASAL GANGLIA.","definition_xrefs":["MESH:D020734"],"direct_ancestors":[{"relation_name":"is_a","term_name":"basal ganglia disorder","termid":"MONDO:0003996"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00063":null,"SJAG_00078":null,"SJAG_00421":null,"SJAG_01039":null,"SJAG_01229":null,"SJAG_01270":null,"SJAG_01317":null,"SJAG_02106":null,"SJAG_02397":null,"SJAG_02695":null,"SJAG_03866":null,"SJAG_03900":null,"SJAG_04404":null,"SJAG_04545":null,"SJAG_04757":null,"SJAG_04840":null,"SJAG_16459":null},"genotype_count":0,"is_obsolete":false,"name":"parkinsonian disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:66079","UMLS:C0242422","DOID:0080855"],"termid":"MONDO:0021095","terms_by_termid":{"MONDO:0008199":null,"MONDO:0008201":null,"MONDO:0010747":null,"MONDO:0011658":null,"MONDO:0011706":null,"MONDO:0013625":null,"MONDO:0014233":null,"MONDO:0014796":null,"MONDO:0030676":null,"MONDO:0036193":null,"MONDO:0957576":null},"xrefs":{"Monarch":{"xref_id":"0021095"}}}


id: FYPO:0004087
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which astral microtubules are present in a greater than normal proportion of the cells that have mitotic spindles.","definition_xrefs":["PMID:11694582","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population phenotype","termid":"FYPO:0000003"},{"relation_name":"is_a","term_name":"abnormal phenotype","termid":"FYPO:0001985"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000003"],"is_obsolete":false,"name":"increased number of cells with astral spindle microtubules","synonyms":[{"name":"increased fraction of cells with spindles with astral microtubules","type":"exact"},{"name":"increased fraction of spindles with astral microtubules","type":"exact"},{"name":"increased number of cells with spindles with astral microtubules","type":"exact"},{"name":"increased number of spindles with astral microtubules","type":"exact"}],"termid":"FYPO:0004087"}


id: PBO:0028527
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_chromatin_silencing_at_centromere_central_core","termid":"PBO:0028527"}


id: GO:0160158
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A protein complex that catalyzes the oxidative decarboxylation of branched-chain alpha-keto acids derived from L-leucine, L-isoleucine, and L-valine to branched-chain acyl-CoAs. It is composed of four polypeptides, E1alpha, E1beta, E2, and E3.","definition_xrefs":["PMID:10464218"],"gene_count":0,"genotype_count":0,"name":"obsolete cytosolic branched-chain alpha-keto acid dehydrogenase complex (obsolete GO:0160158)","synonyms":[{"name":"BKDH complex","type":"exact"}],"termid":"GO:0160158"}


id: FYPO:0007009
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which assembly of heterochromatin mediated by small RNA is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal heterochromatin assembly by small RNA","termid":"FYPO:0000187"},{"relation_name":"is_a","term_name":"abnormal chromatin remodeling","termid":"FYPO:0006356"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0006551","FYPO:0000002","FYPO:0001320","FYPO:0000641","FYPO:0001985"],"is_obsolete":false,"name":"decreased heterochromatin assembly by small RNA","synonyms":[{"name":"decreased RNAi-mediated chromatin silencing","type":"exact"},{"name":"decreased chromatin silencing by small RNA","type":"exact"},{"name":"decreased heterochromatin assembly by small RNA during mitotic cell cycle","type":"related"},{"name":"decreased heterochromatin assembly by small RNA during vegetative growth","type":"exact"},{"name":"reduced heterochromatin assembly by small RNA","type":"exact"}],"termid":"FYPO:0007009"}


id: PBO:0076179
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sulfotransferase family 2B member 1","termid":"PBO:0076179"}


id: PBO:0061497
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuritin 1 like","termid":"PBO:0061497"}


id: GO:0080007
data:
  {"annotated_genes":["SJAG_01457"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[103845],"is_not":false,"summary":null,"term":"GO:0080007"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: S-nitrosoglutathione + NADH + H+ = S-(hydroxysulfenamide)glutathione + NAD+.","definition_xrefs":["PMID:27094420","PMID:11260719","PMID:30795534"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01457":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"S-nitrosoglutathione reductase (NADH) activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["RHEA:78371","MetaCyc:RXN-17884"],"termid":"GO:0080007","terms_by_termid":{"GO:0080007":null}}


id: PBO:0075915
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ST13, Hsp70 interacting protein pseudogene 7","termid":"PBO:0075915"}


id: PBO:0031435
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_histone_H3-K14_acetylation","termid":"PBO:0031435"}


id: PBO:0013759
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA isopentenyltransferase Tit1","termid":"PBO:0013759"}


id: GO:0035237
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with the neuropeptide corazonin to initiate a change in cell activity.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuropeptide receptor activity","termid":"GO:0008188"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"corazonin receptor activity","termid":"GO:0035237"}


id: MONDO:0971137
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"severe congenital myelofibrosis-pancytopenia-intellectual disability-neurologic and ophthalmic abnormalities syndrome","secondary_identifiers":["UMLS:C5925096","MEDGEN:1863736","Orphanet:675775"],"termid":"MONDO:0971137","xrefs":{"Monarch":{"xref_id":"0971137"}}}


id: MONDO:0008704
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Short-limb skeletal dysplasia with severe combined immunodeficiency is an extremely rare type of SCID characterized by the classical signs of T-B- SCID (severe and recurrent infections, diarrhea, failure to thrive, absence of T and B lymphocytes), associated with skeletal anomalies like short stature, bowing of the long bones and metaphyseal abnormalities of variable degree of severity.","definition_xrefs":["Orphanet:935"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T-B- severe combined immunodeficiency","termid":"MONDO:0017855"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"short-limb skeletal dysplasia with severe combined immunodeficiency","secondary_identifiers":["GARD:2988","MESH:C565984","icd11.foundation:469016488","OMIM:200900","UMLS:C1860168","MEDGEN:348040"],"synonyms":[{"name":"SLSD with SCID","type":"related"},{"name":"Slsd with SCID","type":"related"},{"name":"achondroplasia and Swiss type agammaglobulinemia","type":"related"},{"name":"achondroplasia and Swiss-type agammaglobulinemia","type":"related"},{"name":"achondroplasia and severe combined immunodeficiency","type":"related"},{"name":"achondroplasia so-called and severe combined immunodeficiency","type":"related"},{"name":"achondroplasia, so-called, and severe combined immunodeficiency","type":"related"},{"name":"achondroplasia-SCID syndrome","type":"exact"},{"name":"achondroplasia-Swiss type agammaglobulinemia syndrome","type":"exact"},{"name":"achondroplasia-severe combined immunodeficiency syndrome","type":"exact"},{"name":"agammaglobulinemia and achondroplasia","type":"related"},{"name":"immunodeficiency-short limb dwarfism syndrome","type":"exact"},{"name":"short limb skeletal dysplasia with SCID","type":"exact"},{"name":"short-limb skeletal dysplasia with severe combined immunodeficiency","type":"exact"}],"termid":"MONDO:0008704","xrefs":{"Monarch":{"xref_id":"0008704"}}}


id: GO:1904371
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of protein localization to actin cortical patch.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:18216290"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein localization to actin cortical patch","termid":"GO:1904370"},{"relation_name":"is_a","term_name":"negative regulation of protein localization to cell cortex","termid":"GO:1904777"},{"relation_name":"negatively_regulates","term_name":"protein localization to actin cortical patch","termid":"GO:0044379"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of protein localization to actin cortical patch","synonyms":[{"name":"down regulation of protein localisation to actin cortical patch","type":"exact"},{"name":"down regulation of protein localization to actin cortical patch","type":"exact"},{"name":"down-regulation of protein localisation to actin cortical patch","type":"exact"},{"name":"down-regulation of protein localization to actin cortical patch","type":"exact"},{"name":"downregulation of protein localisation to actin cortical patch","type":"exact"},{"name":"downregulation of protein localization to actin cortical patch","type":"exact"},{"name":"inhibition of protein localisation to actin cortical patch","type":"narrow"},{"name":"inhibition of protein localization to actin cortical patch","type":"narrow"},{"name":"negative regulation of protein localisation to actin cortical patch","type":"exact"}],"termid":"GO:1904371"}


id: MONDO:1012555
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"mitral valve dysplasia, non-human animal","termid":"MONDO:1011652"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitral valve dysplasia, domestic cat","secondary_identifiers":["OMIA:002521-9685"],"termid":"MONDO:1012555","xrefs":{"Monarch":{"xref_id":"1012555"}}}


id: PBO:0053504
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 487","termid":"PBO:0053504"}


id: MONDO:0036189
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oculogastrointestinal-neurodevelopmental syndrome","secondary_identifiers":["OMIM:619318","GARD:18024","Orphanet:611201","MEDGEN:1779113","UMLS:C5543355"],"synonyms":[{"name":"OGIN Syndrome","type":"exact"}],"termid":"MONDO:0036189","xrefs":{"Monarch":{"xref_id":"0036189"}}}


id: GO:0003804
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the preferential cleavage of Arg-Thr and then Arg-Ile bonds in prothrombin to form thrombin, and on factor VII, which it converts to a two-chain form (factor VIIa).","definition_xrefs":["GOC:jl","PMID:7354023"],"gene_count":0,"genotype_count":0,"name":"obsolete coagulation factor Xa activity (obsolete GO:0003804)","synonyms":[{"name":"Stuart factor","type":"related"},{"name":"Stuart factor activity","type":"related"},{"name":"activated Stuart-Prower factor","type":"related"},{"name":"activated blood-coagulation factor X","type":"related"},{"name":"activated factor X","type":"related"},{"name":"autoprothrombin C","type":"related"},{"name":"blood coagulation factor X activity","type":"exact"},{"name":"coagulation factor Xa activity","type":"exact"},{"name":"factor Xa","type":"related"},{"name":"plasma thromboplastin","type":"related"},{"name":"prothrombase activity","type":"related"},{"name":"prothrombinase activity","type":"related"},{"name":"thrombokinase activity","type":"related"},{"name":"thromboplastin","type":"related"}],"termid":"GO:0003804"}


id: PBO:0030245
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_ethanol","termid":"PBO:0030245"}


id: PBO:0060011
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4L pseudogene 31","termid":"PBO:0060011"}


id: PBO:0042313
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD27 antisense RNA 1","termid":"PBO:0042313"}


id: MOD:00867
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively cross-links an L-cysteine residue and an L-cysteine converted to an L-selenocysteine residue to form L-cysteinyl-L-selenocystine.","definition_xrefs":["PubMed:17177418","PubMed:12911312","RESID:AA0358#CYS","PubMed:10801974"],"direct_ancestors":[{"relation_name":"is_a","term_name":"selenium substitution for sulfur","termid":"MOD:00007"},{"relation_name":"is_a","term_name":"L-cysteinyl-L-selenocysteine","termid":"MOD:01627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"L-cysteinyl-L-selenocysteine (Cys-Cys)","synonyms":[{"name":"(R,R)-2-amino-3-[3-(2-aminopropanoic acid)sulfanyl]selanylpropanoic acid","type":"exact"},{"name":"CROSSLNK Cysteinyl-selenocysteine (Cys-Sec)","type":"exact"},{"name":"CROSSLNK Cysteinyl-selenocysteine (Sec-Cys)","type":"exact"},{"name":"L-cysteinyl-L-selenocysteine","type":"exact"}],"termid":"MOD:00867"}


id: GO:0005708
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A chromosome involved in the process of mitosis.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete mitotic chromosome (obsolete GO:0005708)","synonyms":[{"name":"mitotic chromosome","type":"exact"}],"termid":"GO:0005708"}


id: MONDO:1012020
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"audiogenic seizure, non-human animal","termid":"MONDO:1011830"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"audiogenic seizure, rabbit","secondary_identifiers":["OMIA:000093-9986"],"termid":"MONDO:1012020","xrefs":{"Monarch":{"xref_id":"1012020"}}}


id: PBO:0058582
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6715b","termid":"PBO:0058582"}


id: GO:0046646
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of gamma-delta T cell proliferation.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of T cell proliferation","termid":"GO:0042129"},{"relation_name":"is_a","term_name":"regulation of gamma-delta T cell activation","termid":"GO:0046643"},{"relation_name":"regulates","term_name":"gamma-delta T cell proliferation","termid":"GO:0046630"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of gamma-delta T cell proliferation","synonyms":[{"name":"regulation of gamma-delta T lymphocyte proliferation","type":"exact"},{"name":"regulation of gamma-delta T-cell proliferation","type":"exact"},{"name":"regulation of gamma-delta T-lymphocyte proliferation","type":"exact"}],"termid":"GO:0046646"}


id: GO:0019432
data:
  {"annotated_genes":["SJAG_03609","SJAG_04041","SJAG_02763","SJAG_03162"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[71675,74931,77345,90396],"is_not":false,"summary":null,"term":"GO:0019432"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a triglyceride, any triester of glycerol.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triglyceride metabolic process","termid":"GO:0006641"},{"relation_name":"is_a","term_name":"acylglycerol biosynthetic process","termid":"GO:0046463"}],"gene_count":4,"genes_by_uniquename":{"SJAG_02763":null,"SJAG_03162":null,"SJAG_03609":null,"SJAG_04041":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"triglyceride biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:TRIGLSYN-PWY","Reactome:R-HSA-75109"],"synonyms":[{"name":"triacylglycerol biosynthesis","type":"exact"},{"name":"triacylglycerol biosynthetic process","type":"exact"},{"name":"triglyceride anabolism","type":"exact"},{"name":"triglyceride biosynthesis","type":"exact"},{"name":"triglyceride formation","type":"exact"},{"name":"triglyceride synthesis","type":"exact"}],"termid":"GO:0019432","terms_by_termid":{"GO:0019432":null}}


id: PBO:0064921
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 4 regulatory subunit 3C","termid":"PBO:0064921"}


id: PBO:0055548
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2984","termid":"PBO:0055548"}


id: PBO:0068273
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonuclease A family member 10 (inactive)","termid":"PBO:0068273"}


id: GO:1901600
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving strigolactone.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sesquiterpenoid metabolic process","termid":"GO:0006714"},{"relation_name":"is_a","term_name":"lactone metabolic process","termid":"GO:1901334"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"strigolactone metabolic process","synonyms":[{"name":"strigolactone metabolism","type":"exact"}],"termid":"GO:1901600"}


id: MONDO:0005109
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An infection caused by the human immunodeficiency virus.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral sexually transmitted disease","termid":"MONDO:0021682"},{"relation_name":"is_a","term_name":"lentivirus infection","termid":"MONDO:0022034"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HIV infectious disease","secondary_identifiers":["DOID:526","ICD9:042","ICD10CM:B20-B20","MEDGEN:5583","NANDO:2200810","NCIT:C3108","ICD9:042-042.99","SCTID:86406008","UMLS:C0019693","EFO:0000764","MESH:D015658"],"synonyms":[{"name":"HIV infection","type":"exact"},{"name":"Human immunodeficiency virus caused disease or disorder","type":"exact"},{"name":"Human immunodeficiency virus disease or disorder","type":"exact"},{"name":"Human immunodeficiency virus infectious disease","type":"exact"},{"name":"human immunodeficiency virus infectious disease","type":"related"}],"termid":"MONDO:0005109","xrefs":{"Monarch":{"xref_id":"0005109"}}}


id: PBO:0024831
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic pumilio family RNA-binding protein Mpf1 (predicted)","termid":"PBO:0024831"}


id: PBO:0090492
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane anchored protein, claudin family, predicted membrane sensor Mac1","termid":"PBO:0090492"}


id: MONDO:0013146
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Brugada syndrome in which the cause of the disease is a mutation in the SCN3B gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Brugada syndrome","termid":"MONDO:0015263"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"Brugada syndrome 7","secondary_identifiers":["MESH:C567734","GARD:15620","OMIM:613120","UMLS:C2751088","DOID:0110224","MEDGEN:413472"],"synonyms":[{"name":"BRGDA7","type":"exact"},{"name":"Brugada syndrome 7","type":"exact"},{"name":"Brugada syndrome caused by mutation in SCN3B","type":"exact"},{"name":"Brugada syndrome type 7","type":"exact"},{"name":"SCN3B Brugada syndrome","type":"exact"},{"name":"atrial fibrillation, familial, 16","type":"related"}],"termid":"MONDO:0013146","xrefs":{"Monarch":{"xref_id":"0013146"}}}


id: GO:1903125
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A peptidyl-threonine phosphorylation that results in negative regulation of thioredoxin peroxidase activity.","definition_xrefs":["GOC:PARL","GO_REF:0000063","GOC:bf","GOC:TermGenie","PMID:21850687"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-threonine phosphorylation","termid":"GO:0018107"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of thioredoxin peroxidase activity by peptidyl-threonine phosphorylation","synonyms":[{"name":"negative regulation of TPx activity by peptidyl-threonine phosphorylation","type":"exact"},{"name":"negative regulation of TrxPx activity by peptidyl-threonine phosphorylation","type":"exact"},{"name":"negative regulation of thiol peroxidase activity by peptidyl-threonine phosphorylation","type":"exact"}],"termid":"GO:1903125"}


id: GO:0072700
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a bismuth (Bi) stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to chemical","termid":"GO:0042221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to bismuth","synonyms":[{"name":"response to bismuth ion","type":"exact"}],"termid":"GO:0072700"}


id: PBO:0086892
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative transmembrane protein involved in the biotin biosynthesis; responsible for uptake of 7-keto 8-aminopelargonic acid; BIO5 is in a cluster of 3 genes (BIO3, BIO4, and BIO5) that mediate biotin synthesis","termid":"PBO:0086892"}


id: PBO:0068520
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 115, pseudogene","termid":"PBO:0068520"}


id: PBO:0076444
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TATA-box binding protein associated factor 15","termid":"PBO:0076444"}


id: PBO:0048109
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-L-fucosidase 1 pseudogene 1","termid":"PBO:0048109"}


id: GO:0002067
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a glandular epithelial cell. A glandular epithelial cell is a columnar/cuboidal epithelial cell found in a two dimensional sheet with a free surface exposed to the lumen of a gland.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"columnar/cuboidal epithelial cell differentiation","termid":"GO:0002065"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glandular epithelial cell differentiation","termid":"GO:0002067"}


id: PBO:0027979
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_level_during_cellular_response_to_cadmium_ion","termid":"PBO:0027979"}


id: GO:0010317
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Refers to the alpha subunit of the heterodimeric complex that possesses pyrophosphate-dependent phosphofructokinase activity.","definition_xrefs":["PMID:2170409"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"},{"relation_name":"part_of","term_name":"pyrophosphate-dependent phosphofructokinase complex","termid":"GO:0010316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"pyrophosphate-dependent phosphofructokinase complex, alpha-subunit complex","synonyms":[{"name":"PFK complex, alpha-subunit","type":"related"}],"termid":"GO:0010317"}


id: PBO:0084474
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mating pheromone a-factor; made by a cells; interacts with alpha cells to induce cell cycle arrest and other responses leading to mating; biogenesis involves C-terminal modification, N-terminal proteolysis, and export; also encoded by MFA1","termid":"PBO:0084474"}


id: FYPO:0000598
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of vacuolar transport is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased intracellular transport","termid":"FYPO:0000464"},{"relation_name":"is_a","term_name":"abnormal vacuolar transport during vegetative growth","termid":"FYPO:0000597"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000138","FYPO:0000002","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"decreased vacuolar transport","synonyms":[{"name":"decreased vacuolar protein transport","type":"narrow"},{"name":"decreased vacuolar transport during mitotic cell cycle","type":"related"},{"name":"decreased vacuolar transport during vegetative growth","type":"exact"},{"name":"reduced vacuolar transport","type":"exact"},{"name":"vacuolar transport: decreased","type":"related"}],"termid":"FYPO:0000598"}


id: GO:0050182
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: butanoyl-CoA + phosphate = butanoyl phosphate + CoA.","definition_xrefs":["RHEA:20892","EC:2.3.1.19"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016746","GO:0003674"],"is_obsolete":false,"name":"phosphate butyryltransferase activity","secondary_identifiers":["MetaCyc:PHOSPHATE-BUTYRYLTRANSFERASE-RXN","KEGG_REACTION:R01174"],"synonyms":[{"name":"butanoyl-CoA:phosphate butanoyltransferase activity","type":"related"},{"name":"phosphotransbutyrylase activity","type":"related"}],"termid":"GO:0050182"}


id: PBO:0059501
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrially encoded 7S DNA","termid":"PBO:0059501"}


id: PBO:0048281
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polypeptide N-acetylgalactosaminyltransferase 16","termid":"PBO:0048281"}


id: GO:0050125
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-benzyloxycarbonylglycine + H2O + H+ = benzyl alcohol + CO2 + glycine.","definition_xrefs":["RHEA:20900","EC:3.5.1.58"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016787","GO:0016810"],"is_obsolete":false,"name":"N-benzyloxycarbonylglycine hydrolase activity","secondary_identifiers":["KEGG_REACTION:R02551","MetaCyc:N-BENZYLOXYCARBONYLGLYCINE-HYDROLASE-RXN"],"synonyms":[{"name":"N-benzyloxycarbonylglycine urethanehydrolase activity","type":"related"},{"name":"benzyloxycarbonylglycine hydrolase activity","type":"related"},{"name":"nalpha-benzyloxycarbonyl amino acid urethane hydrolase I","type":"related"},{"name":"nalpha-benzyloxycarbonyl amino acid urethane hydrolase activity","type":"related"},{"name":"nalpha-carbobenzoxyamino acid amidohydrolase activity","type":"related"}],"termid":"GO:0050125"}


id: PBO:0045563
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dual specificity phosphatase 12","termid":"PBO:0045563"}


id: PBO:0044212
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cathepsin W","termid":"PBO:0044212"}


id: MONDO:0001623
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"lagophthalmos","termid":"MONDO:0001604"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"cicatricial lagophthalmos","secondary_identifiers":["icd11.foundation:1868697470","ICD9:374.23","DOID:13038","MEDGEN:509846","UMLS:C0155199","ICD10CM:H02.21","HP:0030004"],"synonyms":[{"name":"cicatricial lagophthalmos","type":"exact"},{"name":"cicatricial lagophthalmos (disease)","type":"exact"}],"termid":"MONDO:0001623","xrefs":{"Monarch":{"xref_id":"0001623"}}}


id: FYPO:0002783
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which transcription occurs to a lower extent than normal during a cellular response to nitric oxide. All genes, or a specific subset of genes, may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased transcription during vegetative growth","termid":"FYPO:0000781"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000294","FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0006551"],"is_obsolete":false,"name":"decreased transcription during cellular response to nitric oxide","synonyms":[{"name":"decreased transcription during cellular response to nitric oxide during mitotic cell cycle","type":"related"},{"name":"decreased transcription during cellular response to nitric oxide during vegetative growth","type":"exact"},{"name":"decreased transcription during cellular response to nitric oxide stress","type":"related"},{"name":"reduced transcription during cellular response to nitric oxide","type":"exact"}],"termid":"FYPO:0002783"}


id: MONDO:0033559
data:
  {"annotated_genes":["SJAG_00769"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86227],"is_not":false,"summary":null,"term":"MONDO:0033559"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00769":null},"genotype_count":0,"is_obsolete":false,"name":"intellectual developmental disorder with seizures and language delay","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1740295","UMLS:C5436574","GARD:18527","OMIM:619000"],"synonyms":[{"name":"IDDSELD","type":"related"},{"name":"INTELLECTUAL DEVELOPMENTAL DISORDER WITH SEIZURES AND LANGUAGE DELAY","type":"related"},{"name":"SETD1B-NDD","type":"exact"},{"name":"SETD1B-Related Neurodevelopmental Disorder","type":"exact"},{"name":"SETD1B-related neurodevelopmental disorder","type":"exact"}],"termid":"MONDO:0033559","terms_by_termid":{"MONDO:0033559":null},"xrefs":{"Monarch":{"xref_id":"0033559"}}}


id: PBO:0027809
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_phenylarsine_oxide","termid":"PBO:0027809"}


id: PBO:0088764
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cortical anchoring factor, pleckstrin homology domain","termid":"PBO:0088764"}


id: GO:0033252
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of beta-lactamase activity, the hydrolysis of a beta-lactam to yield a substituted beta-amino acid.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of hydrolase activity","termid":"GO:0051336"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of beta-lactamase activity","termid":"GO:0033252"}


id: PBO:0073507
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SH2 domain containing 2A","termid":"PBO:0073507"}


id: PBO:0031033
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_peroxisome_organization","termid":"PBO:0031033"}


id: GO:1905870
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of 3'-UTR-mediated mRNA stabilization.","definition_xrefs":["GO_REF:0000058","PMID:19737525","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of gene expression","termid":"GO:0010628"},{"relation_name":"is_a","term_name":"regulation of 3'-UTR-mediated mRNA stabilization","termid":"GO:1905868"},{"relation_name":"positively_regulates","term_name":"3'-UTR-mediated mRNA stabilization","termid":"GO:0070935"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0016071"}],"interesting_parent_ids":["GO:0016071","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of 3'-UTR-mediated mRNA stabilization","synonyms":[{"name":"activation of 3'-UTR-mediated mRNA stabilization","type":"narrow"},{"name":"activation of 3'-untranslated region-mediated mRNA stabilization","type":"narrow"},{"name":"positive regulation of 3'-untranslated region-mediated mRNA stabilization","type":"exact"},{"name":"up regulation of 3'-UTR-mediated mRNA stabilization","type":"exact"},{"name":"up regulation of 3'-untranslated region-mediated mRNA stabilization","type":"exact"},{"name":"up-regulation of 3'-UTR-mediated mRNA stabilization","type":"exact"},{"name":"up-regulation of 3'-untranslated region-mediated mRNA stabilization","type":"exact"},{"name":"upregulation of 3'-UTR-mediated mRNA stabilization","type":"exact"},{"name":"upregulation of 3'-untranslated region-mediated mRNA stabilization","type":"exact"}],"termid":"GO:1905870"}


id: PBO:0077321
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 59 like","termid":"PBO:0077321"}


id: PR:Q10059
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cdc12 gene.","definition_xrefs":["UniProtKB:Q10059","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell division control protein 12 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1F5.04c","synonyms":[{"name":"Spom972h-cdc12","type":"exact"}],"termid":"PR:Q10059"}


id: PBO:0114388
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane sulfate transmembrane transporter Sul1","termid":"PBO:0114388"}


id: MONDO:0006547
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any change in the skin which affects its appearance or texture. A rash may be localized to one part of the body, or affect all the skin. Rashes may cause the skin to change color, itch, become warm, bumpy, dry, cracked or blistered, swell and may be painful.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skin disorder","termid":"MONDO:0005093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"exanthem","secondary_identifiers":["MEDGEN:8732","SCTID:271807003","NCIT:C39594","UMLS:C0015230","EFO:1000697","Wikipedia:Exanthem","DOID:0050486","HP:0000988","ICD9:782.1","MESH:D005076"],"synonyms":[{"name":"Rash","type":"exact"},{"name":"cutaneous eruption","type":"exact"},{"name":"exanthem","type":"exact"},{"name":"exanthem (disease)","type":"exact"},{"name":"exanthema","type":"exact"},{"name":"skin Rash","type":"exact"},{"name":"skin eruption","type":"exact"}],"termid":"MONDO:0006547","xrefs":{"Monarch":{"xref_id":"0006547"}}}


id: PBO:0012023
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongator subunit Elp1 (predicted)","termid":"PBO:0012023"}


id: PBO:0041706
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calmodulin 2 pseudogene 1","termid":"PBO:0041706"}


id: PBO:0004762
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy associated protein Atg3","termid":"PBO:0004762"}


id: PBO:0028486
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_IMP_cyclohydrolase_activity","termid":"PBO:0028486"}


id: PBO:0070055
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6atac small nuclear 12, pseudogene","termid":"PBO:0070055"}


id: PBO:0041179
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"butyrophilin subfamily 3 member A1","termid":"PBO:0041179"}


id: GO:0036200
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: androsta-1,4-diene-3,17-dione + 2 H+ + O2 + 2 reduced [2Fe-2S]-[ferredoxin] = 9alpha-hydroxyandrosta-1,4-diene-3,17-dione + H2O + 2 oxidized [2Fe-2S]-[ferredoxin].","definition_xrefs":["EC:1.14.15.30"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced iron-sulfur protein as one donor, and incorporation of one atom of oxygen","termid":"GO:0016713"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"3-ketosteroid 9-alpha-monooxygenase activity","secondary_identifiers":["KEGG_REACTION:R09860","RHEA:32199"],"synonyms":[{"name":"3-ketosteroid 9alpha-hydroxylase activity","type":"related"},{"name":"KshAB activity","type":"related"}],"termid":"GO:0036200"}


id: PBO:0108938
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPL7L1 pseudogene 17","termid":"PBO:0108938"}


id: GO:0140084
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The fusion of haploid amoebae cells with matching mating types to form a larger cell, which ingests additional amoebae and forms a cellulose wall. The resulting macrocyst undergoes recombination and meiosis followed by release of haploid amoebae. An example of this process can be found in Dictyostelium discoideum.","definition_xrefs":["PMID:20089169","PMID:16592095"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reproductive process in single-celled organism","termid":"GO:0022413"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sexual macrocyst formation","synonyms":[{"name":"macrocyst formation","type":"related"},{"name":"sexual fusion","type":"related"}],"termid":"GO:0140084"}


id: MONDO:0002808
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign, non-metastasizing cystic epithelial neoplasm arising from the exocrine pancreas. It is composed of glycogen-rich epithelial cells which produce a watery fluid. Signs and symptoms include abdominal mass, abdominal pain, nausea, vomiting, and weight loss.","definition_xrefs":["NCIT:C5712"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pancreatic cystadenoma","termid":"MONDO:0002809"},{"relation_name":"is_a","term_name":"serous cystadenoma","termid":"MONDO:0005177"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"pancreatic serous cystadenoma","secondary_identifiers":["DOID:3917","MEDGEN:233833","UMLS:C1335316","ONCOTREE:PSC"],"synonyms":[{"name":"PSC","type":"related"},{"name":"pancreas serous cystadenoma","type":"exact"},{"name":"pancreatic microcystic adenoma","type":"exact"},{"name":"pancreatic serous cystadenoma","type":"exact"},{"name":"serous cystadenoma of pancreas","type":"exact"},{"name":"serous cystadenoma of the pancreas","type":"exact"}],"termid":"MONDO:0002808","xrefs":{"Monarch":{"xref_id":"0002808"}}}


id: PBO:0004730
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4.3.1.19","termid":"PBO:0004730"}


id: PBO:0108907
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KIAA1191 pseudogene 1","termid":"PBO:0108907"}


id: PBO:0015652
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-occupancy","termid":"PBO:0015652"}


id: MONDO:0024503
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm with neuroendocrine differentiation arising from the digestive system. It includes neuroendocrine tumors (well-differentiated endocrine tumors or carcinoid tumors and well differentiated endocrine carcinomas) and neuroendocrine carcinomas (poorly differentiated neuroendocrine carcinomas, small cell carcinomas, and large cell neuroendocrine carcinomas).","definition_xrefs":["NCIT:C27721"],"direct_ancestors":[{"relation_name":"is_a","term_name":"digestive system disorder","termid":"MONDO:0004335"},{"relation_name":"is_a","term_name":"neuroendocrine neoplasm","termid":"MONDO:0019496"},{"relation_name":"is_a","term_name":"digestive system neoplasm","termid":"MONDO:0021223"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"digestive system neuroendocrine neoplasm","secondary_identifiers":["GARD:2437","MESH:C535650","MEDGEN:232237","UMLS:C1333799","Orphanet:100092"],"synonyms":[{"name":"GEP tumors","type":"related"},{"name":"GEP tumours","type":"related"},{"name":"GEP-NEN","type":"related"},{"name":"GEP-NET","type":"related"},{"name":"alimentary part of gastrointestinal system NET","type":"exact"},{"name":"alimentary part of gastrointestinal system neuroendocrine neoplasm","type":"exact"},{"name":"alimentary part of gastrointestinal system neuroendocrine tumor","type":"exact"},{"name":"alimentary part of gastrointestinal system neuroendocrine tumor, well differentiated, low or intermediate grade","type":"exact"},{"name":"alimentary part of gastrointestinal system neuroendocrine tumour","type":"exact"},{"name":"carcinoid tumor","type":"related"},{"name":"carcinoid tumor of digestive system","type":"exact"},{"name":"carcinoid tumour","type":"related"},{"name":"carcinoid tumour of digestive system","type":"exact"},{"name":"digestive system NET","type":"exact"},{"name":"digestive system neuroendocrine neoplasm","type":"exact"},{"name":"digestive system neuroendocrine tumor","type":"exact"},{"name":"digestive system neuroendocrine tumor, well differentiated, low or intermediate grade","type":"exact"},{"name":"digestive system neuroendocrine tumour","type":"exact"},{"name":"gastro-enteropancreatic neuroendocrine tumor","type":"exact"},{"name":"gastro-enteropancreatic neuroendocrine tumour","type":"exact"},{"name":"gastroenteropancreatic endocrine tumor","type":"exact"},{"name":"gastroenteropancreatic endocrine tumour","type":"exact"},{"name":"gastroenteropancreatic neuroendocrine neoplasm","type":"exact"},{"name":"gastrointestinal neuroendocrine neoplasm","type":"exact"},{"name":"gastrointestinal system neuroendocrine neoplasm","type":"exact"},{"name":"neuroendocrine neoplasm of alimentary part of gastrointestinal system","type":"exact"},{"name":"neuroendocrine neoplasm of digestive system","type":"exact"}],"termid":"MONDO:0024503","xrefs":{"Monarch":{"xref_id":"0024503"}}}


id: PBO:0017957
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Wilson disease","termid":"PBO:0017957"}


id: MOD:01120
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that is produced by formation of an adduct with 2,2,5,7,8-pentamethylchroman-6-sulfonyl chloride, Pmc chloride.","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfonyl halide reagent derivatized residue","termid":"MOD:01652"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2,2,5,7,8-pentamethylchroman-6-sulfonyl chloride derivatized residue","synonyms":[{"name":"2,2,5,7,8-pentamethyl-3,4-dihydro-2H-chromene-6-sulfonyl","type":"exact"},{"name":"2,2,5,7,8-pentamethyl-6-chromansulfonyl","type":"exact"},{"name":"2,2,5,7,8-pentamethyl-chromane-6-sulfonyl","type":"exact"},{"name":"2,2,5,7,8-pentamethylchroman-6-sulfonyl","type":"exact"},{"name":"2,2,5,7,8-pentamethylchroman-6-sulphonyl","type":"exact"},{"name":"3,4-dihydro-2,2,5,7,8-pentamethyl-2H-1-benzopyran-6-sulfonyl","type":"exact"},{"name":"Pmc","type":"exact"},{"name":"PmcRes","type":"exact"}],"termid":"MOD:01120"}


id: GO:0110020
data:
  {"annotated_genes":["SJAG_03048","SJAG_04597","SJAG_01805","SJAG_02592","SJAG_00082","SJAG_02795"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98633],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000432"},{"annotations":[102727],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903500"},{"annotations":[90360,94774],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903501"},{"annotations":[119776,94175],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903499"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the assembly, arrangement of constituent parts, or disassembly of cytoskeletal structures containing both actin and myosin or paramyosin.","definition_xrefs":["GOC:lf","PMID:22790195"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of actin cytoskeleton organization","termid":"GO:0032956"},{"relation_name":"regulates","term_name":"actomyosin structure organization","termid":"GO:0031032"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_01805":null,"SJAG_02592":null,"SJAG_02795":null,"SJAG_03048":null,"SJAG_04597":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0030036"},{"rel_name":"regulates","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0008150","GO:0030036","GO:0007010"],"is_obsolete":false,"name":"regulation of actomyosin structure organization","references_by_uniquename":{"GO_REF:0000107":null,"PMID:32915139":null},"termid":"GO:0110020","terms_by_termid":{"GO:0120306":null,"GO:1903499":null,"GO:1903500":null,"GO:1903501":null,"GO:2000432":null}}


id: PBO:0000136
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor (predicted)","termid":"PBO:0000136"}


id: PBO:0034183
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-directly_inhibits","termid":"PBO:0034183"}


id: RO:0002473
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"x composed_primarily_of y if and only if more than half of the mass of x is made from y or units of the same type as y.","direct_ancestors":[{"relation_name":"is_a","term_name":"has_part","termid":"BFO:0000051"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"composed_primarily_of","termid":"RO:0002473"}


id: MONDO:0020768
data:
  {"annotated_genes":["SJAG_03811","SJAG_04882","SJAG_02016"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85754,85753],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010577"},{"annotations":[87542],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010378"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"X-linked disease","termid":"MONDO:0000425"},{"relation_name":"is_a","term_name":"hearing loss disorder","termid":"MONDO:0005365"},{"relation_name":"is_a","term_name":"inherited auditory system disease","termid":"MONDO:0037940"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02016":null,"SJAG_03811":null,"SJAG_04882":null},"genotype_count":0,"is_obsolete":false,"name":"X-linked deafness","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIMPS:304500"],"synonyms":[{"name":"DFNX","type":"exact"},{"name":"X-linked deafness","type":"exact"},{"name":"deafness, X-linked","type":"exact"},{"name":"deafness, X-linked, DFN","type":"exact"}],"termid":"MONDO:0020768","terms_by_termid":{"MONDO:0010378":null,"MONDO:0010577":null},"xrefs":{"Monarch":{"xref_id":"0020768"}}}


id: GO:0031789
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a G protein-coupled acetylcholine receptor.","definition_xrefs":["GOC:mah","GOC:nln","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor binding","termid":"GO:0001664"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"G protein-coupled acetylcholine receptor binding","secondary_identifiers":["GO:0031790","GO:0031792","GO:0031791","GO:0031793","GO:0031794"],"synonyms":[{"name":"G-protein coupled acetylcholine receptor binding","type":"exact"},{"name":"M1 muscarinic acetylcholine receptor binding","type":"narrow"},{"name":"M1 muscarinic acetylcholine receptor ligand","type":"narrow"},{"name":"M2 muscarinic acetylcholine receptor binding","type":"narrow"},{"name":"M2 muscarinic acetylcholine receptor ligand","type":"narrow"},{"name":"M3 muscarinic acetylcholine receptor binding","type":"narrow"},{"name":"M3 muscarinic acetylcholine receptor ligand","type":"narrow"},{"name":"M4 muscarinic acetylcholine receptor binding","type":"narrow"},{"name":"M4 muscarinic acetylcholine receptor ligand","type":"narrow"},{"name":"M5 muscarinic acetylcholine receptor binding","type":"narrow"},{"name":"M5 muscarinic acetylcholine receptor ligand","type":"narrow"},{"name":"muscarinic acetylcholine receptor binding","type":"exact"},{"name":"muscarinic acetylcholine receptor ligand","type":"narrow"}],"termid":"GO:0031789"}


id: PBO:0072242
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S20 pseudogene 17","termid":"PBO:0072242"}


id: GO:0045457
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of ecdysteroids, a group of polyhydroxylated ketosteroids which initiate post-embryonic development.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid hormone secretion","termid":"GO:0035929"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0023052","GO:0008150"],"is_obsolete":false,"name":"ecdysteroid secretion","termid":"GO:0045457"}


id: MONDO:1012604
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A lysosomal storage disease that occurs in pigs in which there is a buildup of GM2 gangliosides in tissues due to the lack of the enzyme hexosaminidase. It is characterised by progressive neuromuscular dysfunction and impaired growth from an early age.","definition_xrefs":["OMIA:000403-9823"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gangliosidosis, pig","termid":"MONDO:1010842"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GM2 gangliosidosis, pig","synonyms":[{"name":"gangliosidosis, GM2, generic, pig","type":"related"}],"termid":"MONDO:1012604","xrefs":{"Monarch":{"xref_id":"1012604"}}}


id: PBO:0048604
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GID complex subunit 8 homolog","termid":"PBO:0048604"}


id: PBO:0017417
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-transformed_into","termid":"PBO:0017417"}


id: GO:0048929
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of an efferent axon in the posterior lateral line nerve over time from its formation to the mature structure. This process includes axonogenesis and pathfinding of the efferent axons in the posterior lateral line nerve.","definition_xrefs":["PMID:15018940"],"direct_ancestors":[{"relation_name":"is_a","term_name":"efferent axon development in a lateral line nerve","termid":"GO:0048894"},{"relation_name":"part_of","term_name":"posterior lateral line nerve development","termid":"GO:0048918"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"efferent axon development in posterior lateral line nerve","termid":"GO:0048929"}


id: PBO:0055838
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeats and guanylate kinase domain containing","termid":"PBO:0055838"}


id: PBO:0074764
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 1B","termid":"PBO:0074764"}


id: GO:2000867
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of estrone secretion.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of steroid hormone secretion","termid":"GO:2000831"},{"relation_name":"regulates","term_name":"estrone secretion","termid":"GO:0035943"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of estrone secretion","synonyms":[{"name":"regulation of 3-hydroxy-1,3,5(10)-estratrien-17-one secretion","type":"exact"},{"name":"regulation of folliculin secretion","type":"exact"}],"termid":"GO:2000867"}


id: FYPO:0005471
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which glutamate synthase activity using NADH as a cofactor is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished catalytic activity","termid":"FYPO:0000664"},{"relation_name":"is_a","term_name":"abnormal glutamate synthase (NADH) activity","termid":"FYPO:0005470"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0001985","FYPO:0000652","FYPO:0000661","FYPO:0000707"],"is_obsolete":false,"name":"abolished glutamate synthase (NADH) activity","synonyms":[{"name":"abolished L-glutamate synthase (NADH) activity","type":"exact"},{"name":"abolished NADH-dependent glutamate synthase activity","type":"exact"},{"name":"abolished NADH: GOGAT activity","type":"related"},{"name":"abolished glutamate (reduced nicotinamide adenine dinucleotide) synthase","type":"exact"},{"name":"glutamate synthase (NADH) activity abolished","type":"exact"}],"termid":"FYPO:0005471"}


id: GO:0046480
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 mono-beta-D-galactosyldiacylglycerol = alpha-D-galactosyl-beta-D-galactosyldiacylglycerol + 1,2-diacylglycerol.","definition_xrefs":["EC:2.4.1.184"],"direct_ancestors":[{"relation_name":"is_a","term_name":"galactosyltransferase activity","termid":"GO:0008378"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016757","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"galactolipid galactosyltransferase activity","secondary_identifiers":["RHEA:15921","MetaCyc:RXN-1226"],"synonyms":[{"name":"3-(beta-D-galactosyl)-1,2-diacyl-sn-glycerol:mono-3-(beta-D-galactosyl)-1,2-diacyl-sn-glycerol beta-D-galactosyltransferase activity","type":"related"},{"name":"DGDG synthase activity","type":"broad"},{"name":"GGGT activity","type":"related"},{"name":"digalactosyldiacylglycerol synthase activity","type":"broad"},{"name":"galactolipid-galactolipid galactosyltransferase activity","type":"related"},{"name":"galactolipid:galactolipid galactosyltransferase activity","type":"exact"},{"name":"interlipid galactosyltransferase activity","type":"related"}],"termid":"GO:0046480"}


id: GO:2000904
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of starch metabolic process.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of polysaccharide metabolic process","termid":"GO:0032881"},{"relation_name":"regulates","term_name":"starch metabolic process","termid":"GO:0005982"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"regulation of starch metabolic process","synonyms":[{"name":"regulation of starch metabolism","type":"exact"}],"termid":"GO:2000904"}


id: GO:0030741
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine(1+) + myo-inositol = 1D-1-O-methyl-myo-inositol + S-adenosyl-L-homocysteine + H+.","definition_xrefs":["RHEA:17565","EC:2.1.1.40"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016741","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"inositol 1-methyltransferase activity","secondary_identifiers":["KEGG_REACTION:R01188","MetaCyc:MYO-INOSITOL-3-O-METHYLTRANSFERASE-RXN"],"synonyms":[{"name":"S-adenosyl-L-methionine:1D-myo-inositol 1-O-methyltransferase activity","type":"related"},{"name":"S-adenosyl-L-methionine:myo-inositol 3-O-methyltransferase activity","type":"related"},{"name":"S-adenosylmethionine:myo-inositol 3-methyltransferase activity","type":"related"},{"name":"inositol 3-O-methyltransferase (name based on 1L-numbering system and not 1D-numbering)","type":"related"},{"name":"inositol 3-O-methyltransferase activity","type":"related"},{"name":"inositol D-1-methyltransferase activity","type":"related"},{"name":"myo-inositol 3-O-methyltransferase activity","type":"related"}],"termid":"GO:0030741"}


id: MONDO:0012171
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"marfanoid habitus with situs inversus","secondary_identifiers":["MESH:C563814","OMIM:609008","UMLS:C1836994","MEDGEN:323046"],"synonyms":[{"name":"marfanoid habitus with situs inversus","type":"exact"}],"termid":"MONDO:0012171","xrefs":{"Monarch":{"xref_id":"0012171"}}}


id: GO:1902980
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any synthesis of RNA primer involved in meiotic cell cycle DNA replication.","definition_xrefs":["GO_REF:0000060","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete synthesis of RNA primer involved in premeiotic DNA replication (obsolete GO:1902980)","synonyms":[{"name":"synthesis of RNA primer involved in meiotic cell cycle DNA replication","type":"exact"}],"termid":"GO:1902980"}


id: GO:0043709
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The attachment of a cell to a solid substrate, via cell adhesion molecules, during the formation of a biofilm composed of microorganisms of the same species.","definition_xrefs":["GOC:tb","GOC:dph","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell adhesion involved in biofilm formation","termid":"GO:0043708"},{"relation_name":"part_of","term_name":"single-species submerged biofilm formation","termid":"GO:0090609"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"cell adhesion involved in single-species biofilm formation","synonyms":[{"name":"cell adhesion during single-species biofilm formation","type":"related"}],"termid":"GO:0043709"}


id: PBO:0064188
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase A2 group XIIA pseudogene 2","termid":"PBO:0064188"}


id: PBO:0003203
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1-acylglycerol-3-phosphate acyltransferase (predicted)","termid":"PBO:0003203"}


id: MONDO:0019443
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenitally uncorrected transposition of the great arteries (congenitally uncorrected TGA), also referred to as complete transposition, is a congenital cardiac malformation characterized by atrioventricular concordance and ventriculoarterial (VA) discordance.","definition_xrefs":["Orphanet:860"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transposition of the great arteries","termid":"MONDO:0000153"},{"relation_name":"is_a","term_name":"congenital heart disease","termid":"MONDO:0005453"},{"relation_name":"is_a","term_name":"cardiogenetic disease","termid":"MONDO:0100547"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"dextro-looped transposition of the great arteries","secondary_identifiers":["DOID:0060770","GARD:5476","OMIMPS:608808","NANDO:1200698","UMLS:C5671327","MEDGEN:1812310"],"synonyms":[{"name":"D-TGA","type":"exact"},{"name":"DTGA","type":"exact"},{"name":"congenitally uncorrected transposition of the great arteries","type":"exact"},{"name":"congenitally uncorrected transposition of the great vessels","type":"exact"},{"name":"isolated ventriculoarterial discordance","type":"exact"},{"name":"ventriculoarterial discordance with atrioventricular concordance","type":"exact"}],"termid":"MONDO:0019443","xrefs":{"Monarch":{"xref_id":"0019443"}}}


id: PBO:0046796
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coagulation factor II thrombin receptor like 2","termid":"PBO:0046796"}


id: PBO:0039095
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenosylhomocysteinase like 1","termid":"PBO:0039095"}


id: MONDO:0011242
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Bartter syndrome in which the cause of the disease is a mutation in the BSND gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Bartter syndrome type 4","termid":"MONDO:0019524"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"Bartter disease type 4A","secondary_identifiers":["SCTID:717791000","UMLS:C1865270","GARD:15348","DOID:0110145","OMIM:602522","MEDGEN:355430"],"synonyms":[{"name":"BARTS4A","type":"exact"},{"name":"BSND","type":"exact"},{"name":"BSND Bartter syndrome","type":"exact"},{"name":"Bartter disease type 4a","type":"exact"},{"name":"Bartter syndrome caused by mutation in BSND","type":"exact"},{"name":"Bartter syndrome type 4a","type":"exact"},{"name":"Bartter syndrome, infantile, with sensorineural deafness","type":"related"},{"name":"Bartter syndrome, neonatal, with sensorineural deafness","type":"related"},{"name":"Bartter syndrome, type 4A","type":"related"},{"name":"Bartter syndrome, type 4A, neonatal, with sensorineural deafness","type":"related"},{"name":"neonatal Bartter syndrome with sensorineural deafness","type":"exact"},{"name":"sensorineural deafness with mild renal dysfunction","type":"related"}],"termid":"MONDO:0011242","xrefs":{"Monarch":{"xref_id":"0011242"}}}


id: MONDO:0009664
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A prenatal onset growth disorder with multiorgan manifestations.","definition_xrefs":["Orphanet:2576"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"},{"relation_name":"is_a","term_name":"disorder of defective peroxisome oxidative status","termid":"MONDO:0100306"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0019053"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0019053","MONDO:0005066"],"is_obsolete":false,"name":"mulibrey nanism","secondary_identifiers":["GARD:95","icd11.foundation:1167260635","MESH:D050336","OMIM:253250","DOID:0050436","MEDGEN:99347","UMLS:C0524582","NCIT:C84906","ICD9:759.89","SCTID:81604003"],"synonyms":[{"name":"MUL","type":"exact"},{"name":"Perheentupa syndrome","type":"exact"},{"name":"mulibrey dwarfism","type":"exact"},{"name":"mulibrey nanism","type":"exact"},{"name":"muscle-liver-brain-eye nanism","type":"exact"},{"name":"pericardial constriction and Growth failure","type":"related"},{"name":"pericardial constriction and growth failure","type":"exact"},{"name":"pericardial constriction-growth failure syndrome","type":"exact"}],"termid":"MONDO:0009664","xrefs":{"Monarch":{"xref_id":"0009664"}}}


id: GO:0070029
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alphav-beta3 integrin complex bound to osteopontin.","definition_xrefs":["PMID:7532190"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005886","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"alphav-beta3 integrin-osteopontin complex","synonyms":[{"name":"ITGAV-ITGB3-SPP1 complex","type":"narrow"}],"termid":"GO:0070029"}


id: GO:0051481
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the concentration of calcium ions in the cytosol.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of biological quality","termid":"GO:0065008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cytosolic calcium ion concentration","synonyms":[{"name":"cytoplasmic calcium ion concentration reduction","type":"broad"},{"name":"cytosolic calcium ion concentration reduction","type":"exact"},{"name":"reduction of calcium ion concentration in cytoplasm","type":"broad"},{"name":"reduction of calcium ion concentration in cytosol","type":"exact"},{"name":"reduction of cytoplasmic calcium ion concentration","type":"broad"},{"name":"reduction of cytosolic calcium ion concentration","type":"exact"}],"termid":"GO:0051481"}


id: GO:0045679
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of R8 differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of compound eye photoreceptor cell differentiation","termid":"GO:0110116"},{"relation_name":"regulates","term_name":"R8 cell differentiation","termid":"GO:0045465"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of R8 cell differentiation","termid":"GO:0045679"}


id: GO:0001688
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete cytoplasmic dynein intermediate chain (obsolete GO:0001688)","synonyms":[{"name":"cytoplasmic dynein intermediate chain","type":"exact"}],"termid":"GO:0001688"}


id: GO:0033137
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the phosphorylation of peptidyl-serine.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein phosphorylation","termid":"GO:0001933"},{"relation_name":"is_a","term_name":"regulation of peptidyl-serine phosphorylation","termid":"GO:0033135"},{"relation_name":"negatively_regulates","term_name":"peptidyl-serine phosphorylation","termid":"GO:0018105"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of peptidyl-serine phosphorylation","termid":"GO:0033137"}


id: MONDO:0001956
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A syndrome characterized by leakage of intravascular fluids into the extravascular space. This syndrome is observed in patients who demonstrate a state of generalized leaky capillaries following shock syndromes, low-flow states, ischemia-reperfusion injuries, toxemias, medications, or poisoning. It can lead to generalized edema and multiple organ failure.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"capillary disorder","termid":"MONDO:0001574"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"capillary leak syndrome","secondary_identifiers":["GARD:1084","NCIT:C62578","DOID:14400","EFO:1001284","ICD9:448.9","MedDRA:10007196","MEDGEN:137987","UMLS:C0343084","SCTID:87730004","MESH:D019559","Orphanet:188"],"synonyms":[{"name":"AVLS","type":"exact"},{"name":"CLS","type":"exact"},{"name":"Clarkson disease","type":"exact"},{"name":"SCLS","type":"exact"},{"name":"acute vascular leak syndrome","type":"exact"},{"name":"capillary hyperpermeability syndrome","type":"exact"},{"name":"capillary leak syndrome","type":"exact"},{"name":"capillary leak syndrome with monoclonal gammopathy","type":"related"},{"name":"idiopathic capillary leak syndrome","type":"exact"},{"name":"periodic systemic capillary leak syndrome","type":"related"},{"name":"systemic capillary leak syndrome","type":"exact"}],"termid":"MONDO:0001956","xrefs":{"Monarch":{"xref_id":"0001956"}}}


id: PBO:0001057
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"curved DNA-binding protein Cdb4, peptidase family","termid":"PBO:0001057"}


id: GO:0072251
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which relatively unspecialized cells acquire specialized structural and/or functional features that characterize the juxtaglomerulus cells of the metanephros as it progresses from its formation to the mature state.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"juxtaglomerulus cell differentiation","termid":"GO:0072052"},{"relation_name":"is_a","term_name":"cell differentiation involved in metanephros development","termid":"GO:0072202"},{"relation_name":"part_of","term_name":"metanephric juxtaglomerular apparatus development","termid":"GO:0072206"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric juxtaglomerulus cell differentiation","termid":"GO:0072251"}


id: MONDO:0006255
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant neoplasm arising from the large blood vessels. It is characterized by the presence of tumor cells that grow within the lumen of the blood vessels. The intraluminal tumor growth may result in vascular obstruction and spread of tumor emboli to peripheral organs. The prognosis is usually poor.","definition_xrefs":["NCIT:C53677"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spindle cell sarcoma","termid":"MONDO:0002927"},{"relation_name":"is_a","term_name":"soft tissue sarcoma","termid":"MONDO:0018078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"intimal sarcoma","secondary_identifiers":["EFO:1000305","UMLS:C1708550","MEDGEN:317791","ONCOTREE:INTS"],"synonyms":[{"name":"INTS","type":"related"}],"termid":"MONDO:0006255","xrefs":{"Monarch":{"xref_id":"0006255"}}}


id: GO:0102839
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 1-18:2-2-16:2-monogalactosyldiacylglycerol + O2 + a reduced electron acceptor = 1-18:3-2-16:2-monogalactosyldiacylglycerol + 2 H2O + an oxidized electron acceptor.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 1-18:2-2-16:2-monogalactosyldiacylglycerol desaturase activity (obsolete GO:0102839)","termid":"GO:0102839"}


id: GO:0102090
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: (R)-adrenaline(1+) + S-adenosyl-L-methionine = metanephrine + S-adenosyl-L-homocysteine + H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete adrenaline O-methyltransferase activity (obsolete GO:0102090)","termid":"GO:0102090"}


id: PBO:0002005
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L20 (predicted)","termid":"PBO:0002005"}


id: FYPO:0003581
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the number of sites at which the protein Kms1 accumulates is greater than normal.","definition_xrefs":["PMID:24943839","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype during vegetative growth","termid":"FYPO:0004639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"increased number of Kms1 foci","synonyms":[{"name":"increased number of Kms1 foci during mitotic cell cycle","type":"related"},{"name":"increased number of Kms1 foci during vegetative growth","type":"exact"}],"termid":"FYPO:0003581"}


id: FYPO:0004163
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which a larger than normal proportion of cells in the population remains viable when cells the population are subject to glucose starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population viability","termid":"FYPO:0002057"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002057"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0002057"],"is_obsolete":false,"name":"increased viability upon glucose starvation","synonyms":[{"name":"increased cell population viability upon glucose starvation","type":"exact"},{"name":"increased viability during glucose starvation","type":"exact"},{"name":"increased viability upon glucose depletion","type":"exact"},{"name":"increased viability upon glucose deprivation","type":"exact"},{"name":"increased viability upon glucose limitation","type":"related"}],"termid":"FYPO:0004163"}


id: MONDO:0020514
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete thymoma (obsolete MONDO:0020514)","termid":"MONDO:0020514","xrefs":{"Monarch":{"xref_id":"0020514"}}}


id: GO:0014742
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of muscle hypertrophy.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of muscle hypertrophy","termid":"GO:0014743"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"positively_regulates","term_name":"muscle hypertrophy","termid":"GO:0014896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of muscle hypertrophy","termid":"GO:0014742"}


id: PBO:0045235
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DnaJ heat shock protein family (Hsp40) member C19 pseudogene 3","termid":"PBO:0045235"}


id: GO:0044666
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that can methylate lysine-4 of histone H3, and which contains either of the protein subunits MLL3 or MLL4 in mammals, or equivalent in other species.","definition_xrefs":["GOC:sart","PMID:21875999"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone methyltransferase complex","termid":"GO:0035097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005654"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005634","GO:0005654"],"is_obsolete":false,"name":"MLL3/4 complex","synonyms":[{"name":"Trr/COMPASS-like complex","type":"exact"}],"termid":"GO:0044666"}


id: PBO:0057589
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 892b","termid":"PBO:0057589"}


id: MONDO:0008424
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sella turcica, bridged","secondary_identifiers":["OMIM:182200","MEDGEN:356654","UMLS:C1866959","MESH:C566689"],"synonyms":[{"name":"sella turcica, bridged","type":"exact"}],"termid":"MONDO:0008424","xrefs":{"Monarch":{"xref_id":"0008424"}}}


id: MONDO:0009534
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"chronic mucocutaneous candidiasis","termid":"MONDO:0015279"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005046"],"is_obsolete":false,"name":"chronic mucocutaneous candidiasis due to inhibition of lymphoblastic transformation","secondary_identifiers":["OMIM:247430","UMLS:C1855476","MEDGEN:344504","MESH:C565433"],"synonyms":[{"name":"lymphoblastic transformation, inhibition of","type":"exact"}],"termid":"MONDO:0009534","xrefs":{"Monarch":{"xref_id":"0009534"}}}


id: GO:0016801
data:
  {"annotated_genes":["SJAG_01088"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[75998],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004301"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of any ether or thioether bond, -O- or -S- respectively.","definition_xrefs":["GOC:ai","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity","termid":"GO:0016787"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01088":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"hydrolase activity, acting on ether bonds","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["EC:3.3.-.-"],"termid":"GO:0016801","terms_by_termid":{"GO:0004301":null}}


id: GO:0052035
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which a symbiont activates, maintains or increases the frequency, rate or extent of the inflammatory response of the host organism; the inflammatory response is the immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation by symbiont of host inflammatory response (obsolete GO:0052035)","synonyms":[{"name":"activation by symbiont of host inflammatory response","type":"narrow"},{"name":"positive regulation by organism of inflammatory response of other organism involved in symbiotic interaction","type":"broad"},{"name":"stimulation by symbiont of host inflammatory response","type":"narrow"},{"name":"up regulation by symbiont of host inflammatory response","type":"exact"},{"name":"up-regulation by symbiont of host inflammatory response","type":"exact"},{"name":"upregulation by symbiont of host inflammatory response","type":"exact"}],"termid":"GO:0052035"}


id: PR:Q9C0Y5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pdr1 gene.","definition_xrefs":["UniProtKB:Q9C0Y5","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-binding cassette transporter pdr1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPB24D3.09c","synonyms":[{"name":"ABC transporter pdr1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-pdr1","type":"exact"}],"termid":"PR:Q9C0Y5"}


id: MONDO:0003346
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Vasculitis affecting the blood vessels of the brain and/or spinal cord.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system disorder","termid":"MONDO:0002602"},{"relation_name":"is_a","term_name":"vasculitis","termid":"MONDO:0018882"},{"relation_name":"is_a","term_name":"neurovascular disorder","termid":"MONDO:0043218"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"central nervous system vasculitis","secondary_identifiers":["DOID:525","MESH:D020293","NCIT:C84622","MEDGEN:148408","UMLS:C0751878"],"synonyms":[{"name":"central nervous system vasculitis","type":"exact"},{"name":"vasculitis of central nervous system","type":"exact"}],"termid":"MONDO:0003346","xrefs":{"Monarch":{"xref_id":"0003346"}}}


id: GO:2000064
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cortisol biosynthetic process.","definition_xrefs":["GOC:obol","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of ketone biosynthetic process","termid":"GO:0010566"},{"relation_name":"is_a","term_name":"regulation of glucocorticoid biosynthetic process","termid":"GO:0031946"},{"relation_name":"is_a","term_name":"regulation of alcohol biosynthetic process","termid":"GO:1902930"},{"relation_name":"regulates","term_name":"cortisol biosynthetic process","termid":"GO:0034651"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006629"],"is_obsolete":false,"name":"regulation of cortisol biosynthetic process","synonyms":[{"name":"regulation of cortisol anabolism","type":"related"},{"name":"regulation of cortisol biosynthesis","type":"exact"},{"name":"regulation of cortisol formation","type":"exact"},{"name":"regulation of cortisol synthesis","type":"exact"}],"termid":"GO:2000064"}


id: GO:2000588
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of platelet-derived growth factor receptor-beta signaling pathway.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of platelet-derived growth factor receptor signaling pathway","termid":"GO:0010641"},{"relation_name":"is_a","term_name":"regulation of platelet-derived growth factor receptor-beta signaling pathway","termid":"GO:2000586"},{"relation_name":"positively_regulates","term_name":"platelet-derived growth factor receptor-beta signaling pathway","termid":"GO:0035791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of platelet-derived growth factor receptor-beta signaling pathway","synonyms":[{"name":"positive regulation of PDGF receptor-beta signaling pathway","type":"exact"},{"name":"positive regulation of PDGFR-beta signaling pathway","type":"exact"},{"name":"positive regulation of betaPDGF receptor signaling pathway","type":"exact"},{"name":"positive regulation of platelet-derived growth factor receptor-beta signalling pathway","type":"exact"}],"termid":"GO:2000588"}


id: PBO:0058715
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6843","termid":"PBO:0058715"}


id: PBO:0089961
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BTB/POZ domain","termid":"PBO:0089961"}


id: MOD:00856
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-alanine residue to an L-alaninium (protonated L-alanine).","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-alanine residue","termid":"MOD:00901"},{"relation_name":"is_a","term_name":"alpha-amino protonated residue","termid":"MOD:01700"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protonated L-alanine (L-alaninium) residue","termid":"MOD:00856"}


id: GO:0042839
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving D-glucuronate, the D-enantiomer of glucuronate.","definition_xrefs":["GOC:jl","GOC:mah","GOC:jsg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucuronate metabolic process","termid":"GO:0019585"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"D-glucuronate metabolic process","synonyms":[{"name":"D-glucuronate metabolism","type":"exact"}],"termid":"GO:0042839"}


id: PR:O74958
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mmi1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74958"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"YTH domain-containing protein mmi1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC736.12c","synonyms":[{"name":"Spom972h-mmi1","type":"exact"},{"name":"meiotic mRNA interception protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74958"}


id: PBO:0073326
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serpin family A member 2 (gene/pseudogene)","termid":"PBO:0073326"}


id: PBO:0074338
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1","termid":"PBO:0074338"}


id: MONDO:0000657
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete gamma heavy chain disease (obsolete MONDO:0000657)","termid":"MONDO:0000657","xrefs":{"Monarch":{"xref_id":"0000657"}}}


id: GO:0001550
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Increase in size of the cumulus surrounding the oocyte including change in morphology due to proliferation and dispersion of cumulus cells.","definition_xrefs":["PMID:30010832"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ovulation cycle process","termid":"GO:0022602"},{"relation_name":"is_a","term_name":"developmental growth","termid":"GO:0048589"},{"relation_name":"part_of","term_name":"antral ovarian follicle growth","termid":"GO:0001547"},{"relation_name":"part_of","term_name":"fused antrum stage","termid":"GO:0048165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ovarian cumulus expansion","synonyms":[{"name":"ovarian cumulus growth","type":"related"}],"termid":"GO:0001550"}


id: PBO:0063979
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 13","termid":"PBO:0063979"}


id: MONDO:0016263
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A primitive neuroectodermal tumor that involves the body of uterus.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primitive neuroectodermal tumor","termid":"MONDO:0005462"},{"relation_name":"is_a","term_name":"corpus uteri neoplasm","termid":"MONDO:0021254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"primitive neuroectodermal tumor of the corpus uteri","secondary_identifiers":["Orphanet:213630","MEDGEN:1640822","GARD:20478","UMLS:C4707724"],"synonyms":[{"name":"body of uterus primitive neuroectodermal tumor","type":"exact"},{"name":"body of uterus primitive neuroectodermal tumour","type":"exact"},{"name":"malignant peripheral neuroectodermal tumor of the corpus uteri","type":"exact"},{"name":"malignant peripheral neuroectodermal tumour of the corpus uteri","type":"exact"},{"name":"peripheral neuroectodermal cancer of the corpus uteri","type":"exact"},{"name":"primitive neuroectodermal tumor of body of uterus","type":"exact"},{"name":"primitive neuroectodermal tumour of body of uterus","type":"exact"}],"termid":"MONDO:0016263","xrefs":{"Monarch":{"xref_id":"0016263"}}}


id: PBO:0081099
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger DHHC-type containing 24","termid":"PBO:0081099"}


id: MOD:00710
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively adds a proton and replaces two hydrogen atoms with two methyl groups.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dimethylated residue","termid":"MOD:00429"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"protonated-dimethylated residue","synonyms":[{"name":"Me2+Res","type":"exact"}],"termid":"MOD:00710"}


id: PR:O14242
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A pyridoxine kinase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyridoxal kinase C6F6.11c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6F6.11c","secondary_identifiers":["UniProtKB:O14242"],"synonyms":[{"name":"Spom972h-pdxK","type":"exact"}],"termid":"PR:O14242"}


id: PBO:0089980
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNAJ protein Xdj1","termid":"PBO:0089980"}


id: MONDO:0032572
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cardiac, facial, and digital anomalies with developmental delay","secondary_identifiers":["MEDGEN:1648330","NCIT:C179868","OMIM:618164","UMLS:C4748484"],"synonyms":[{"name":"CAFDADD","type":"related"},{"name":"CARDIAC, FACIAL, AND DIGITAL ANOMALIES WITH DEVELOPMENTAL DELAY","type":"related"}],"termid":"MONDO:0032572","xrefs":{"Monarch":{"xref_id":"0032572"}}}


id: PBO:0065617
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein tyrosine phosphatase 4A3","termid":"PBO:0065617"}


id: PBO:0073283
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septin 14 pseudogene 4","termid":"PBO:0073283"}


id: GO:1904222
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of serine C-palmitoyltransferase activity.","definition_xrefs":["GOC:TermGenie","GO_REF:0000059","GOC:BHF","PMID:16120614","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of transferase activity","termid":"GO:0051347"},{"relation_name":"is_a","term_name":"regulation of serine C-palmitoyltransferase activity","termid":"GO:1904220"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of serine C-palmitoyltransferase activity","synonyms":[{"name":"activation of 3-oxosphinganine synthetase activity","type":"narrow"},{"name":"activation of SPT","type":"related"},{"name":"activation of acyl-CoA:serine C-2 acyltransferase decarboxylating","type":"related"},{"name":"activation of palmitoyl-CoA:L-serine C-palmitoyltransferase (decarboxylating) activity","type":"narrow"},{"name":"activation of serine C-palmitoyltransferase activity","type":"narrow"},{"name":"positive regulation of 3-oxosphinganine synthetase activity","type":"exact"},{"name":"positive regulation of SPT","type":"related"},{"name":"positive regulation of acyl-CoA:serine C-2 acyltransferase decarboxylating","type":"related"},{"name":"positive regulation of palmitoyl-CoA:L-serine C-palmitoyltransferase (decarboxylating) activity","type":"exact"},{"name":"up regulation of 3-oxosphinganine synthetase activity","type":"exact"},{"name":"up regulation of SPT","type":"related"},{"name":"up regulation of acyl-CoA:serine C-2 acyltransferase decarboxylating","type":"related"},{"name":"up regulation of palmitoyl-CoA:L-serine C-palmitoyltransferase (decarboxylating) activity","type":"exact"},{"name":"up regulation of serine C-palmitoyltransferase activity","type":"exact"},{"name":"up-regulation of 3-oxosphinganine synthetase activity","type":"exact"},{"name":"up-regulation of SPT","type":"related"},{"name":"up-regulation of acyl-CoA:serine C-2 acyltransferase decarboxylating","type":"related"},{"name":"up-regulation of palmitoyl-CoA:L-serine C-palmitoyltransferase (decarboxylating) activity","type":"exact"},{"name":"up-regulation of serine C-palmitoyltransferase activity","type":"exact"},{"name":"upregulation of 3-oxosphinganine synthetase activity","type":"exact"},{"name":"upregulation of SPT","type":"related"},{"name":"upregulation of acyl-CoA:serine C-2 acyltransferase decarboxylating","type":"related"},{"name":"upregulation of palmitoyl-CoA:L-serine C-palmitoyltransferase (decarboxylating) activity","type":"exact"},{"name":"upregulation of serine C-palmitoyltransferase activity","type":"exact"}],"termid":"GO:1904222"}


id: PBO:0031325
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_cyclosporin_A","termid":"PBO:0031325"}


id: PBO:0029804
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_vegetative_cell_population_with_abnormal_cell_shape_(obsolete_FYPO:0002433)","termid":"PBO:0029804"}


id: GO:0047616
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acyl-CoA + NADP+ = 2,3-dehydroacyl-CoA + NADPH + H+.","definition_xrefs":["EC:1.3.1.8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"acyl-CoA dehydrogenase (NADP+) activity","secondary_identifiers":["MetaCyc:ACYL-COA-DEHYDROGENASE-NADP+-RXN","RHEA:22460"],"synonyms":[{"name":"2-enoyl-CoA reductase activity","type":"related"},{"name":"acyl-CoA:NADP+ 2-oxidoreductase activity","type":"related"},{"name":"crotonyl coenzyme A reductase activity","type":"related"},{"name":"dehydrogenase, acyl coenzyme A (nicotinamide adenine dinucleotide phosphate)","type":"related"},{"name":"enoyl coenzyme A reductase activity","type":"related"}],"termid":"GO:0047616"}


id: GO:0102328
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: H+ + a 3-oxoacid = carbon dioxide + a methylketone.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 3-oxoacid decarboxylase activity (obsolete GO:0102328)","termid":"GO:0102328"}


id: GO:0000213
data:
  {"annotated_genes":["SJAG_03328","SJAG_01260","SJAG_04907","SJAG_00754"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[71729,73304,79347,118062],"is_not":false,"summary":null,"term":"GO:0000213"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: pretRNA = a 3'-half-tRNA molecule with a 5'-OH end + a 5'-half-tRNA molecule with a 2',3'-cyclic phosphate end + an intron with a 2',3'-cyclic phosphate and a 5'-hydroxyl terminus.","definition_xrefs":["EC:4.6.1.16"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA endonuclease activity","termid":"GO:0004521"},{"relation_name":"is_a","term_name":"tRNA-specific ribonuclease activity","termid":"GO:0004549"},{"relation_name":"is_a","term_name":"phosphorus-oxygen lyase activity","termid":"GO:0016849"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00754":null,"SJAG_01260":null,"SJAG_03328":null,"SJAG_04907":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140098"}],"interesting_parent_ids":["GO:0003824","GO:0140098","GO:0140101","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"tRNA-intron lyase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:3.1.27.9-RXN"],"synonyms":[{"name":"tRNA splicing endonuclease activity","type":"related"},{"name":"tRNA-intron endonuclease activity","type":"exact"},{"name":"tRNA-intron endoribonuclease activity","type":"exact"}],"termid":"GO:0000213","terms_by_termid":{"GO:0000213":null}}


id: PBO:0056946
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 10b","termid":"PBO:0056946"}


id: PBO:0027165
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_sporulation_resulting_in_formation_of_azygotic_ascus_with_more_than_four_spores","termid":"PBO:0027165"}


id: PBO:0089480
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi transport complex subunit Cog5","termid":"PBO:0089480"}


id: PBO:0079085
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Tyr (anticodon GTA) 2-1","termid":"PBO:0079085"}


id: PBO:0004260
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box protein Pof10","termid":"PBO:0004260"}


id: PBO:0065007
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PR/SET domain 11","termid":"PBO:0065007"}


id: FYPO:0002400
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed during mitotic interphase in which all detectable microtubules are present in a single bundle.","definition_xrefs":["PomBase:mlr","PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton during vegetative growth","termid":"FYPO:0004315"},{"relation_name":"is_a","term_name":"abnormal microtubule bundle","termid":"FYPO:0005558"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0000054","FYPO:0001985","FYPO:0001320","FYPO:0002399"],"is_obsolete":false,"name":"single microtubule bundle during mitotic interphase","synonyms":[{"name":"single MT bundle during mitotic interphase","type":"exact"},{"name":"single microtubule array during mitotic interphase","type":"exact"}],"termid":"FYPO:0002400"}


id: MONDO:0100518
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An instance of attention deficit-hyperactivity disorder that is caused by an inherited genomic modification in an individual.","definition_xrefs":["MONDO:patterns/hereditary"],"direct_ancestors":[{"relation_name":"is_a","term_name":"attention deficit-hyperactivity disorder","termid":"MONDO:0007743"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hereditary attention deficit-hyperactivity disorder","secondary_identifiers":["OMIM:143465"],"termid":"MONDO:0100518","xrefs":{"Monarch":{"xref_id":"0100518"}}}


id: GO:0051210
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell irreversibly increases in size uniformly in all directions. In general, a rounded cell morphology reflects isotropic cell growth.","definition_xrefs":["GOC:ai","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell growth","termid":"GO:0016049"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"isotropic cell growth","synonyms":[{"name":"uniform cell growth","type":"related"}],"termid":"GO:0051210"}


id: PR:000050569
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A septation initiation network scaffold protein cdc11 (Schizosaccharomyces pombe) that includes at least one phosphorylated residue, and is the predominant phosphorylated form observed during interphase.","definition_xrefs":["PMID:12546793","PRO:DAN","PomBase:VW"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cdc11/HypoPhos","pombase_gene_id":"SPCC1739.11c","synonyms":[{"name":"PomBase_original_PRO_term_name: septation initiation network scaffold protein cdc11 hypophosphorylated form (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-cdc11/HypoPhos+","type":"exact"},{"name":"cdc11/HypoPhos","type":"exact"},{"name":"cdc11p hypophosphorylated form (2) (Schizosaccharomyces pombe)","type":"related"},{"name":"cdc11p interphase form (Schizosaccharomyces pombe)","type":"related"}],"termid":"PR:000050569"}


id: MONDO:0006193
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Simple or complex endometrial hyperplasia characterized by the absence of epithelial atypia.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hyperplasia","termid":"MONDO:0005043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endometrial hyperplasia without atypia","secondary_identifiers":["MEDGEN:274011","ICD9:621.34","SCTID:134031000119108","NCIT:C40157","UMLS:C1516855","EFO:1000234"],"synonyms":[{"name":"typical endometrial hyperplasia","type":"exact"}],"termid":"MONDO:0006193","xrefs":{"Monarch":{"xref_id":"0006193"}}}


id: PBO:0064522
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase III subunit C","termid":"PBO:0064522"}


id: PBO:0082299
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Aromatic aminotransferase II; catalyzes the first step of tryptophan, phenylalanine, and tyrosine catabolism; involved with Aro8p in production of kynurenic acid to detoxify excess tryptophan","termid":"PBO:0082299"}


id: MONDO:0004606
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete pyoderma gangrenosum (obsolete MONDO:0004606)","termid":"MONDO:0004606","xrefs":{"Monarch":{"xref_id":"0004606"}}}


id: PBO:0051766
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"importin 9","termid":"PBO:0051766"}


id: GO:0032837
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell cycle process in which genetic material, in the form of chromosomes, is organized and then physically separated and apportioned to two or more sets during a normally chiasmate meiosis under the condition that chiasma have not occurred between a particular pair of homologs. Distributive segregation is a backup mechanism to ensure the segregation of homologs that have failed to cross over - either as a consequence of mutation or not, as, for example, the 4th chromosome of Drosophila melanogaster (which never exchanges, presumably due to its small size) - but nevertheless segregate normally.","definition_xrefs":["GOC:ma","GOC:expert_rsh","GOC:sart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic chromosome segregation","termid":"GO:0045132"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0140013"}],"interesting_parent_ids":["GO:0008150","GO:0007049","GO:0140013"],"is_obsolete":false,"name":"distributive segregation","termid":"GO:0032837"}


id: GO:2000447
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of macrophage migration inhibitory factor signaling pathway.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cytokine-mediated signaling pathway","termid":"GO:0001960"},{"relation_name":"is_a","term_name":"regulation of macrophage migration inhibitory factor signaling pathway","termid":"GO:2000446"},{"relation_name":"negatively_regulates","term_name":"macrophage migration inhibitory factor signaling pathway","termid":"GO:0035691"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of macrophage migration inhibitory factor signaling pathway","synonyms":[{"name":"negative regulation of MIF signaling pathway","type":"exact"},{"name":"negative regulation of macrophage migration inhibitory factor signalling pathway","type":"exact"}],"termid":"GO:2000447"}


id: PBO:0027654
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-cut_during_cellular_response_to_ionizing_radiation_during_mitotic_S_phase","termid":"PBO:0027654"}


id: PBO:0030138
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_GTPase_activity","termid":"PBO:0030138"}


id: GO:2001277
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of L-leucine biosynthetic process.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of small molecule metabolic process","termid":"GO:0062014"},{"relation_name":"is_a","term_name":"negative regulation of amino acid biosynthetic process","termid":"GO:2000283"},{"relation_name":"is_a","term_name":"regulation of L-leucine biosynthetic process","termid":"GO:2001276"},{"relation_name":"negatively_regulates","term_name":"L-leucine biosynthetic process","termid":"GO:0009098"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0008150","GO:0006520","GO:0044281"],"is_obsolete":false,"name":"negative regulation of L-leucine biosynthetic process","synonyms":[{"name":"negative regulation of L-leucine anabolism","type":"exact"},{"name":"negative regulation of L-leucine biosynthesis","type":"exact"},{"name":"negative regulation of L-leucine formation","type":"exact"},{"name":"negative regulation of L-leucine synthesis","type":"exact"},{"name":"negative regulation of leucine biosynthetic process","type":"broad"}],"termid":"GO:2001277"}


id: GO:1905749
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of endosome to plasma membrane protein transport.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:22869721"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intracellular protein transport","termid":"GO:0033157"},{"relation_name":"is_a","term_name":"regulation of protein localization to plasma membrane","termid":"GO:1903076"},{"relation_name":"is_a","term_name":"regulation of endocytic recycling","termid":"GO:2001135"},{"relation_name":"regulates","term_name":"endosome to plasma membrane protein transport","termid":"GO:0099638"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0016192"],"is_obsolete":false,"name":"regulation of endosome to plasma membrane protein transport","termid":"GO:1905749"}


id: PBO:0031223
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cellular_response_to_drug_(obsolete_FYPO:0000211)","termid":"PBO:0031223"}


id: GO:1990795
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A specialized region of the axon terminus portion of a rod bipolar axon. A rod bipolar cell is a neuron found in the retina and having connections with rod photoreceptor cells and neurons in the inner plexiform layer.","definition_xrefs":["PMID:19883736"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terminal bouton","termid":"GO:0043195"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"rod bipolar cell terminal bouton","termid":"GO:1990795"}


id: GO:1903840
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an arsenite(3-) stimulus.","definition_xrefs":["GO_REF:0000071","PMID:12106899","GOC:mr","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to arsenic-containing substance","termid":"GO:0046685"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to arsenite(3-)","termid":"GO:1903840"}


id: PBO:0058840
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 8070","termid":"PBO:0058840"}


id: MONDO:0014328
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any early infantile epileptic encephalopathy in which the cause of the disease is a mutation in the GABRA1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"Dravet syndrome","termid":"MONDO:0100135"},{"relation_name":"is_a","term_name":"developmental and epileptic encephalopathy","termid":"MONDO:0100062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"},{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027","MONDO:0700092"],"is_obsolete":false,"name":"developmental and epileptic encephalopathy, 19","secondary_identifiers":["OMIM:615744","DOID:0080431","UMLS:C3810400","GARD:16008","MEDGEN:816730","NCIT:C142802"],"synonyms":[{"name":"DEE19","type":"exact"},{"name":"EIEE19","type":"exact"},{"name":"Early Infantile epileptic encephalopathy 19","type":"exact"},{"name":"GABRA1 early infantile epileptic encephalopathy","type":"exact"},{"name":"developmental and epileptic encephalopathy 19","type":"exact"},{"name":"early infantile epileptic encephalopathy caused by mutation in GABRA1","type":"exact"},{"name":"epileptic encephalopathy, early infantile, 19","type":"exact"},{"name":"epileptic encephalopathy, early infantile, type 19","type":"exact"}],"termid":"MONDO:0014328","xrefs":{"Monarch":{"xref_id":"0014328"}}}


id: PBO:0090553
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CENP-K ortholog Sim4","termid":"PBO:0090553"}


id: PBO:0031371
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_mitotic_cell_cycle","termid":"PBO:0031371"}


id: GO:0047280
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: diphosphate + nicotinamide mononucleotide = 5-phospho-alpha-D-ribose 1-diphosphate + H+ + nicotinamide.","definition_xrefs":["RHEA:16149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentosyltransferase activity","termid":"GO:0016763"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824","GO:0016757"],"is_obsolete":false,"name":"nicotinamide phosphoribosyltransferase activity","secondary_identifiers":["EC:2.4.2.12","MetaCyc:2.4.2.12-RXN","KEGG_REACTION:R01271","Reactome:R-HSA-197250"],"synonyms":[{"name":"NMN diphosphorylase activity","type":"related"},{"name":"NMN pyrophosphorylase activity","type":"related"},{"name":"NMN synthetase activity","type":"related"},{"name":"nicotinamide mononucleotide pyrophosphorylase activity","type":"related"},{"name":"nicotinamide mononucleotide synthetase activity","type":"related"},{"name":"nicotinamide-nucleotide:diphosphate phospho-alpha-D-ribosyltransferase activity","type":"related"}],"termid":"GO:0047280"}


id: GO:0060027
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The morphogenetic process in which an epithelium narrows along one axis and lengthens in a perpendicular axis usually resulting in the formation of the three primary germ layers, ectoderm, mesoderm and endoderm.","definition_xrefs":["PMID:12062082","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic morphogenesis","termid":"GO:0048598"},{"relation_name":"is_a","term_name":"convergent extension","termid":"GO:0060026"},{"relation_name":"part_of","term_name":"gastrulation","termid":"GO:0007369"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"convergent extension involved in gastrulation","termid":"GO:0060027"}


id: PBO:0089350
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"23S rRNA/U6 snRNA (adenine-N(6))-methyltransferase Mtl16","termid":"PBO:0089350"}


id: PR:O00091
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A glucose-6-phosphate 1-dehydrogenase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucose-6-phosphate 1-dehydrogenase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3A12.18","secondary_identifiers":["UniProtKB:O00091"],"synonyms":[{"name":"G6PD (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SPAC3A12.18","type":"related"},{"name":"Spom972h-G6PD","type":"exact"}],"termid":"PR:O00091"}


id: GO:0048546
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the digestive tract are generated and organized. The digestive tract is the anatomical structure through which food passes and is processed.","definition_xrefs":["GOC:dph","PMID:12618131","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tube morphogenesis","termid":"GO:0035239"},{"relation_name":"part_of","term_name":"digestive tract development","termid":"GO:0048565"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"digestive tract morphogenesis","secondary_identifiers":["GO:0048547"],"synonyms":[{"name":"alimentary canal morphogenesis","type":"exact"},{"name":"digestive tube morphogenesis","type":"exact"},{"name":"gastrointestinal tract morphogenesis","type":"exact"},{"name":"gut morphogenesis","type":"broad"},{"name":"intestinal morphogenesis","type":"narrow"}],"termid":"GO:0048546"}


id: GO:1905224
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The aggregation, arrangement and bonding together of a set of components to form a clathrin-coated pit.","definition_xrefs":["GOC:TermGenie","GOC:PARL","GO_REF:0000079","PMID:26589353","GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete clathrin-coated pit assembly (obsolete GO:1905224)","synonyms":[{"name":"clathrin-coated pit formation","type":"exact"},{"name":"coated pit assembly","type":"exact"},{"name":"coated pit formation","type":"exact"}],"termid":"GO:1905224"}


id: PBO:0003823
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sterol 24-C-methyltransferase Erg6","termid":"PBO:0003823"}


id: MONDO:0004055
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"lacrimal apparatus disorder","termid":"MONDO:0001854"},{"relation_name":"is_a","term_name":"acute disease","termid":"MONDO:0020683"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"acute inflammation of lacrimal passage","secondary_identifiers":["MEDGEN:572973","SCTID:302900006","UMLS:C0339129","ICD9:375.3","DOID:6970"],"termid":"MONDO:0004055","xrefs":{"Monarch":{"xref_id":"0004055"}}}


id: PBO:0042951
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil-helix-coiled-coil-helix domain containing 2 pseudogene 5","termid":"PBO:0042951"}


id: GO:0140742
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The transcription of lncRNAs, non-coding RNAs over 200 nucleotides in length, from a DNA template.","definition_xrefs":["PMID:33767452","PMID:33913806"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA-templated transcription","termid":"GO:0006351"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006351"}],"interesting_parent_ids":["GO:0008150","GO:0006351","GO:0010467"],"is_obsolete":false,"name":"lncRNA transcription","termid":"GO:0140742"}


id: PBO:0039315
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"allantoicase","termid":"PBO:0039315"}


id: GO:0050137
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O2 + H+ + NADPH = 2 H2O + NADP+.","definition_xrefs":["EC:1.11.1.2","RHEA:15173"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peroxidase activity","termid":"GO:0004601"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"NADPH peroxidase activity","secondary_identifiers":["MetaCyc:NADPH-PEROXIDASE-RXN","KEGG_REACTION:R00113"],"synonyms":[{"name":"NADP peroxidase activity","type":"related"},{"name":"NADPH:hydrogen-peroxide oxidoreductase activity","type":"related"},{"name":"TPN peroxidase activity","type":"related"},{"name":"TPNH peroxidase activity","type":"related"},{"name":"nicotinamide adenine dinucleotide phosphate peroxidase activity","type":"related"},{"name":"triphosphopyridine nucleotide peroxidase activity","type":"related"}],"termid":"GO:0050137"}


id: PBO:0059940
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND2 pseudogene 26","termid":"PBO:0059940"}


id: GO:0062105
data:
  {"annotated_genes":["SJAG_01375","SJAG_03332","SJAG_02817","SJAG_00722","SJAG_01269","SJAG_03773"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[89992],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070039"},{"annotations":[76303,75985,79121],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008650"},{"annotations":[109497],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090486"},{"annotations":[60397,98212],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106050"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + RNA = S-adenosyl-L-homocysteine + RNA containing 2'-O-methylribonucleotide.","definition_xrefs":["RHEA:58956","PMID:30626973"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-methyltransferase activity","termid":"GO:0008171"},{"relation_name":"is_a","term_name":"RNA methyltransferase activity","termid":"GO:0008173"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00722":null,"SJAG_01269":null,"SJAG_01375":null,"SJAG_02817":null,"SJAG_03332":null,"SJAG_03773":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0140098","GO:0003824","GO:0003674","GO:0016741","GO:0016740"],"is_obsolete":false,"name":"RNA 2'-O-methyltransferase activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0062105","terms_by_termid":{"GO:0008650":null,"GO:0070039":null,"GO:0090486":null,"GO:0106050":null}}


id: PBO:0057291
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 509-3","termid":"PBO:0057291"}


id: MONDO:0013729
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any pregnancy loss, recurrent, susceptibility in which the cause of the disease is a mutation in the ANXA5 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pregnancy loss, recurrent, susceptibility","termid":"MONDO:0000144"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pregnancy loss, recurrent, susceptibility to, 3","secondary_identifiers":["UMLS:C3280674","MEDGEN:482304","OMIM:614391"],"synonyms":[{"name":"ANXA5 pregnancy loss, recurrent, susceptibility","type":"exact"},{"name":"RPRGL3","type":"related"},{"name":"pregnancy loss, recurrent, susceptibility caused by mutation in ANXA5","type":"exact"},{"name":"pregnancy loss, recurrent, susceptibility to, 3","type":"exact"},{"name":"pregnancy loss, recurrent, susceptibility to, type 3","type":"exact"}],"termid":"MONDO:0013729","xrefs":{"Monarch":{"xref_id":"0013729"}}}


id: MONDO:0007060
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any azoospermia in which the cause of the disease is a mutation in the SPATA16 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spermatogenic failure","termid":"MONDO:0004983"},{"relation_name":"is_a","term_name":"male infertility due to globozoospermia","termid":"MONDO:0015746"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"spermatogenic failure 6","secondary_identifiers":["DOID:0070167","UMLS:C0403825","GARD:15032","MEDGEN:96048","OMIM:102530","SCTID:236818008"],"synonyms":[{"name":"SPATA16 azoospermia","type":"exact"},{"name":"SPGF6","type":"related"},{"name":"acrosome malformation of spermatozoa","type":"related"},{"name":"azoospermia caused by mutation in SPATA16","type":"exact"},{"name":"globozoospermia","type":"related"},{"name":"round-headed spermatozoa","type":"related"},{"name":"spermatogenic failure 6","type":"exact"},{"name":"spermatogenic failure type 6","type":"exact"},{"name":"spermatozoa, round-headed","type":"related"}],"termid":"MONDO:0007060","xrefs":{"Monarch":{"xref_id":"0007060"}}}


id: PR:O13846
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A fatty acid 2-hydroxylase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR12863:SF0","OMA:SCHPO01681"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ceramide very long chain fatty acid hydroxylase-like protein C19G12.08 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC19G12.08","secondary_identifiers":["UniProtKB:O13846"],"synonyms":[{"name":"Spom972h-FA2H","type":"exact"}],"termid":"PR:O13846"}


id: PBO:0074016
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 10","termid":"PBO:0074016"}


id: PBO:0030741
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-tapered_cell_during_nitrogen_starvation","termid":"PBO:0030741"}


id: PBO:0075901
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2","termid":"PBO:0075901"}


id: PBO:0043392
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytidine monophosphate N-acetylneuraminic acid synthetase","termid":"PBO:0043392"}


id: GO:0075223
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of sporangium germination.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of sporangium development","termid":"GO:0075310"},{"relation_name":"regulates","term_name":"sporangium germination","termid":"GO:0075222"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of sporangium germination","synonyms":[{"name":"modulation of sporangium germination","type":"narrow"},{"name":"modulation of sporangium germination on or near host","type":"narrow"}],"termid":"GO:0075223"}


id: GO:0033094
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: putrescine + 2-oxoglutarate = L-glutamate + 1-pyrroline + H2O. The enzymatic part of the reaction produces 4-aminobutanal that spontaneously cyclizes to form 1-pyrroline.","definition_xrefs":["GOC:mlg","EC:2.6.1.82","RHEA:12268"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016769"}],"interesting_parent_ids":["GO:0016740","GO:0016769","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"putrescine--2-oxoglutarate transaminase activity","secondary_identifiers":["MetaCyc:PUTTRANSAM-RXN"],"synonyms":[{"name":"PAT activity","type":"related"},{"name":"YgjG","type":"related"},{"name":"butane-1,4-diamine:2-oxoglutarate aminotransferase activity","type":"related"},{"name":"putrescine aminotransferase activity","type":"broad"},{"name":"putrescine transaminase activity","type":"broad"},{"name":"putrescine-alpha-ketoglutarate transaminase activity","type":"related"},{"name":"putrescine:2-oxoglutarate aminotransferase activity","type":"related"},{"name":"putrescine:alpha-ketoglutarate aminotransferase activity","type":"related"}],"termid":"GO:0033094"}


id: PBO:0062392
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 13 pseudogene","termid":"PBO:0062392"}


id: PBO:0070608
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 76","termid":"PBO:0070608"}


id: PBO:0081536
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 445","termid":"PBO:0081536"}


id: PBO:0055110
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2529","termid":"PBO:0055110"}


id: GO:0031412
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a gas vesicle. A gas vesicle is a hollow structure made of protein, which usually has the form of a cylindrical tube closed by conical end caps.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle organization","termid":"GO:0006996"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"gas vesicle organization","synonyms":[{"name":"gas vesicle biosynthesis","type":"narrow"},{"name":"gas vesicle formation","type":"narrow"},{"name":"gas vesicle organisation","type":"exact"},{"name":"gas vesicle organization and biogenesis","type":"related"}],"termid":"GO:0031412"}


id: PBO:0116415
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S. pombe specific DUF999 family protein 10","termid":"PBO:0116415"}


id: MONDO:0032834
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"retinitis pigmentosa","termid":"MONDO:0019200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0005066","MONDO:0004736"],"is_obsolete":false,"name":"retinitis pigmentosa 86","secondary_identifiers":["OMIM:618613","UMLS:C5231428","GARD:16368","DOID:0112143","MEDGEN:1684789"],"synonyms":[{"name":"RETINITIS PIGMENTOSA 86","type":"related"},{"name":"RP86","type":"related"}],"termid":"MONDO:0032834","xrefs":{"Monarch":{"xref_id":"0032834"}}}


id: GO:0071373
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a luteinizing hormone stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to luteinizing hormone","termid":"GO:0034699"},{"relation_name":"is_a","term_name":"cellular response to gonadotropin stimulus","termid":"GO:0071371"},{"relation_name":"is_a","term_name":"cellular response to peptide hormone stimulus","termid":"GO:0071375"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to luteinizing hormone stimulus","termid":"GO:0071373"}


id: MONDO:0010647
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any azoospermia in which the cause of the disease is a mutation in the TEX11 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spermatogenic failure","termid":"MONDO:0004983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"spermatogenic failure, X-linked, 2","secondary_identifiers":["MEDGEN:374322","UMLS:C1839841","DOID:0070185","GARD:15302","OMIM:309120"],"synonyms":[{"name":"Male infertility from defect in meiosis","type":"related"},{"name":"SPGFX2","type":"related"},{"name":"TEX11 azoospermia","type":"exact"},{"name":"azoospermia caused by mutation in TEX11","type":"exact"},{"name":"spermatogenic failure, X-linked, 2","type":"exact"},{"name":"spermatogenic failure, X-linked, 2, X-linked recessive","type":"exact"},{"name":"spermatogenic failure, X-linked, type 2","type":"exact"}],"termid":"MONDO:0010647","xrefs":{"Monarch":{"xref_id":"0010647"}}}


id: GO:0098698
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a postsynaptic specialization, a region that lies adjacent to the cytoplasmic face of the postsynaptic membrane.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle assembly","termid":"GO:0070925"},{"relation_name":"is_a","term_name":"postsynaptic specialization organization","termid":"GO:0099084"},{"relation_name":"part_of","term_name":"postsynapse assembly","termid":"GO:0099068"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"postsynaptic specialization assembly","termid":"GO:0098698"}


id: PBO:0045824
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 alpha 1 pseudogene 14","termid":"PBO:0045824"}


id: GO:0061009
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the common bile duct over time, from its formation to the mature structure. The common bile duct is formed from the joining of the common hepatic duct running from the liver, and the cystic duct running from the gallbladder. The common bile duct transports bile from the liver and gallbladder to the intestine.","definition_xrefs":["PMID:20614624"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tube development","termid":"GO:0035295"},{"relation_name":"part_of","term_name":"hepaticobiliary system development","termid":"GO:0061008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"common bile duct development","synonyms":[{"name":"CBD development","type":"exact"},{"name":"EHBD development","type":"broad"},{"name":"bile duct development","type":"exact"},{"name":"extrahepatic bile duct development","type":"broad"}],"termid":"GO:0061009"}


id: GO:0046243
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of p-xylene (1,4-dimethylbenzene), a colorless, liquid aromatic hydrocarbon.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete p-xylene biosynthetic process (obsolete GO:0046243)","synonyms":[{"name":"p-xylene anabolism","type":"exact"},{"name":"p-xylene biosynthesis","type":"exact"},{"name":"p-xylene biosynthetic process","type":"exact"},{"name":"p-xylene formation","type":"exact"},{"name":"p-xylene synthesis","type":"exact"},{"name":"para-xylene biosynthesis","type":"exact"},{"name":"para-xylene biosynthetic process","type":"exact"}],"termid":"GO:0046243"}


id: PBO:0087623
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the CSN and 26S proteasome lid complexes; similar to mammalian p55 subunit and to another S. cerevisiae regulatory subunit, Rpn7p; Rpn5p is an essential protein; the COP9 signalosome is also known as the CSN","termid":"PBO:0087623"}


id: PBO:0109393
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed transcript, Y-linked 21B","termid":"PBO:0109393"}


id: GO:0002528
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the extent to which blood vessels can be pervaded by fluid contributing to an acute inflammatory response.","definition_xrefs":["GOC:jal"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of vascular permeability","termid":"GO:0043114"},{"relation_name":"part_of","term_name":"acute inflammatory response","termid":"GO:0002526"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of vascular permeability involved in acute inflammatory response","synonyms":[{"name":"regulation of vascular permeability during acute inflammatory response","type":"related"}],"termid":"GO:0002528"}


id: GO:0010880
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of release of sequestered calcium ion into cytosol by the sarcoplasmic reticulum, the process in which the release of sequestered calcium ion by sarcoplasmic reticulum into cytosol occurs via calcium release channels.","definition_xrefs":["GOC:tb","GOC:dph","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of release of sequestered calcium ion into cytosol","termid":"GO:0051279"},{"relation_name":"regulates","term_name":"release of sequestered calcium ion into cytosol by sarcoplasmic reticulum","termid":"GO:0014808"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of release of sequestered calcium ion into cytosol by sarcoplasmic reticulum","termid":"GO:0010880"}


id: PBO:0086973
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Regulatory subunit of protein phosphatase 1 (Glc7p); involved in glycogen metabolism and chromosome segregation; proposed to regulate Glc7p activity via conformational alteration; ortholog of the mammalian protein phosphatase inhibitor 2; protein abundance increases in response to DNA replication stress","termid":"PBO:0086973"}


id: MONDO:0001147
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A congenital abnormality in which the meninges protrude through a defect in the spinal column or the cranium.","definition_xrefs":["NCIT:C105595"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"spina bifida","termid":"MONDO:0008449"},{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"meningocele","secondary_identifiers":["NCIT:C101209","UMLS:C0025299","SCTID:171131006","MESH:D008588","MEDGEN:44356","Orphanet:93968","HP:0002435","DOID:1088"],"synonyms":[{"name":"central nervous system meningocele","type":"exact"},{"name":"meningocele","type":"exact"},{"name":"meningocele (disease)","type":"exact"},{"name":"spinal meningocele","type":"narrow"}],"termid":"MONDO:0001147","xrefs":{"Monarch":{"xref_id":"0001147"}}}


id: MONDO:0002644
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"myositis disease","termid":"MONDO:0021167"},{"relation_name":"is_a","term_name":"idiopathic disease","termid":"MONDO:0700007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"idiopathic granulomatous myositis","secondary_identifiers":["NCIT:C27575","Orphanet:206979","UMLS:C1334150","MEDGEN:235204","DOID:3428"],"synonyms":[{"name":"granulomatous myositis","type":"related"},{"name":"idiopathic granulomatous myositis","type":"exact"}],"termid":"MONDO:0002644","xrefs":{"Monarch":{"xref_id":"0002644"}}}


id: PBO:0028196
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_L-azetidine-2-carboxylic_acid","termid":"PBO:0028196"}


id: PBO:0031622
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_rate_of_sporulation","termid":"PBO:0031622"}


id: PBO:0085007
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Negative regulator of the glucose-sensing signal transduction pathway; required for repression of transcription by Rgt1p; interacts with Rgt1p and the Snf3p and Rgt2p glucose sensors; phosphorylated by Yck1p, triggering Mth1p degradation; MTH1 has a paralog, STD1, that arose from the whole genome duplication","termid":"PBO:0085007"}


id: PBO:0039523
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ANKRD33B pseudogene 4","termid":"PBO:0039523"}


id: PBO:0058082
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4300","termid":"PBO:0058082"}


id: PBO:0078870
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transient receptor potential cation channel subfamily M member 4","termid":"PBO:0078870"}


id: GO:0031992
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The biological transducer activity that accepts energy and converts it to another form, often by transfer to another molecule within the cell.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molecular transducer activity","termid":"GO:0060089"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674"],"is_obsolete":false,"name":"energy transducer activity","synonyms":[{"name":"light harvesting activity","type":"related"},{"name":"photon capture","type":"related"}],"termid":"GO:0031992"}


id: PR:O13731
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ubr11 gene.","definition_xrefs":["UniProtKB:O13731","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"E3 ubiquitin-protein ligase ubr11 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC15A10.11","synonyms":[{"name":"N-end-recognizing protein 11 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"N-recognin-11 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ubr11","type":"exact"}],"termid":"PR:O13731"}


id: MONDO:0859347
data:
  {"annotated_genes":["SJAG_00134"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85985],"is_not":false,"summary":null,"term":"MONDO:0859347"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00134":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with hypotonia, dysmorphic facies, and skin abnormalities","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:620191","UMLS:C5774285","MEDGEN:1824058"],"termid":"MONDO:0859347","terms_by_termid":{"MONDO:0859347":null},"xrefs":{"Monarch":{"xref_id":"0859347"}}}


id: PATO:0002065
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's being arranged like rays or radii; radiating from a common center.","definition_xrefs":["PATOC:me"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"star shaped","synonyms":[{"name":"stellate","type":"exact"}],"termid":"PATO:0002065"}


id: CHEBI:64090
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tert-butyl hydroperoxide","termid":"CHEBI:64090"}


id: MONDO:0005887
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Tuberculosis of the mouth, tongue, and salivary glands.","definition_xrefs":["MESH:D014393"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gastrointestinal tuberculosis","termid":"MONDO:0005768"},{"relation_name":"is_a","term_name":"mouth disorder","termid":"MONDO:0006858"},{"relation_name":"is_a","term_name":"inflammatory disease","termid":"MONDO:0021166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"oral tuberculosis","secondary_identifiers":["UMLS:C0041323","MEDGEN:52888","DOID:402","ICD9:528.9","ICD9:017.90","SCTID:235067001"],"termid":"MONDO:0005887","xrefs":{"Monarch":{"xref_id":"0005887"}}}


id: FYPO:0006376
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular metabolism phenotype in which the observed occurrence of protein processing is decreased when the cell is subject to nitrogen starvation.","definition_xrefs":["PMID:25803873","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein processing","termid":"FYPO:0006374"},{"relation_name":"is_a","term_name":"decreased proteolysis","termid":"FYPO:0006527"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002494"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0000002","FYPO:0002274","FYPO:0006551","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"decreased protein processing during nitrogen starvation","synonyms":[{"name":"decreased protein cleavage during nitrogen starvation","type":"related"},{"name":"decreased protein maturation by peptide bond cleavage during nitrogen starvation","type":"exact"},{"name":"decreased protein maturation by peptide bond hydrolysis during nitrogen starvation","type":"exact"},{"name":"decreased protein processing during nitrogen depletion","type":"exact"},{"name":"decreased protein processing during nitrogen deprivation","type":"exact"},{"name":"reduced protein processing during nitrogen starvation","type":"exact"}],"termid":"FYPO:0006376"}


id: MONDO:0019296
data:
  {"annotated_genes":["SJAG_00031","SJAG_01926"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87052],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007908"},{"annotations":[85910],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011213"}]},"cv_name":"mondo","definition":"A disease involving the superficial fascia.","definition_xrefs":["MONDO:patterns/location_top"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete rare genetic skin disease (obsolete MONDO:0019043)","termid":"MONDO:0019043"},{"relation_name":"is_a","term_name":"integumentary system disorder","termid":"MONDO:0002051"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00031":null,"SJAG_01926":null},"genotype_count":0,"is_obsolete":false,"name":"subcutaneous tissue disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["Orphanet:79382","MEDGEN:712397","UMLS:C1290008"],"synonyms":[{"name":"disease of superficial fascia","type":"exact"},{"name":"disease or disorder of superficial fascia","type":"exact"},{"name":"disorder of superficial fascia","type":"exact"},{"name":"superficial fascia disease","type":"exact"},{"name":"superficial fascia disease or disorder","type":"exact"}],"termid":"MONDO:0019296","terms_by_termid":{"MONDO:0007908":null,"MONDO:0011213":null},"xrefs":{"Monarch":{"xref_id":"0019296"}}}


id: MONDO:0017384
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A widespread acute rash characterized by fever and multiple small pustules on a reddish background.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dermatitis","termid":"MONDO:0002406"},{"relation_name":"is_a","term_name":"severe cutaneous adverse reaction","termid":"MONDO:0005594"},{"relation_name":"is_a","term_name":"toxic dermatosis","termid":"MONDO:0017396"},{"relation_name":"is_a","term_name":"acute disease","termid":"MONDO:0020683"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"acute generalized exanthematous pustulosis","secondary_identifiers":["SCTID:702617007","MedDRA:10048799","NCIT:C112122","GARD:21164","MEDGEN:209091","ICD9:709.8","UMLS:C0877055","Orphanet:293173","MESH:D056150"],"synonyms":[{"name":"AGEP","type":"exact"},{"name":"pustular drug eruption","type":"exact"},{"name":"toxic pustuloderma","type":"exact"}],"termid":"MONDO:0017384","xrefs":{"Monarch":{"xref_id":"0017384"}}}


id: GO:1900410
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A regulation of transcription from RNA polymerase II promoter that results in regulation of histone modification.","definition_xrefs":["GOC:mah","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of histone modification by regulation of transcription from RNA polymerase II promoter (obsolete GO:1900410)","termid":"GO:1900410"}


id: GO:1903276
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of sodium ion export across the plasma membrane.","definition_xrefs":["GOC:TermGenie","GOC:rl","GOC:BHF","GO_REF:0000058","PMID:17095720"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of sodium ion transmembrane transport","termid":"GO:1902305"},{"relation_name":"regulates","term_name":"sodium ion export across plasma membrane","termid":"GO:0036376"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055085","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of sodium ion export across plasma membrane","secondary_identifiers":["GO:1903273"],"synonyms":[{"name":"regulation of sodium export","type":"related"},{"name":"regulation of sodium ion export","type":"related"},{"name":"regulation of sodium ion export from cell","type":"exact"}],"termid":"GO:1903276"}


id: PBO:0013834
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mst2 histone acetytransferase acytyltransferase complex subunit","termid":"PBO:0013834"}


id: GO:0160122
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of an corneal epithelial cell, any of the cells making up an corneal epithelium.","definition_xrefs":["PMID:32697979","PMID:33414365"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell differentiation","termid":"GO:0030855"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"corneal epithelial cell differentiation","termid":"GO:0160122"}


id: MONDO:0014525
data:
  {"annotated_genes":["SJAG_02302"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87096],"is_not":false,"summary":null,"term":"MONDO:0014525"}]},"cv_name":"mondo","definition":"Any combined oxidative phosphorylation deficiency in which the cause of the disease is a mutation in the GTPBP3 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"combined oxidative phosphorylation deficiency","termid":"MONDO:0000732"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02302":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004069"],"is_obsolete":false,"name":"combined oxidative phosphorylation defect type 23","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["Orphanet:444013","DOID:0111500","GARD:17759","MEDGEN:1799166","OMIM:616198","UMLS:C5567743"],"synonyms":[{"name":"COXPD23","type":"exact"},{"name":"GTPBP3 combined oxidative phosphorylation deficiency","type":"exact"},{"name":"combined oxidative phosphorylation deficiency 23","type":"related"},{"name":"combined oxidative phosphorylation deficiency caused by mutation in GTPBP3","type":"exact"},{"name":"combined oxidative phosphorylation deficiency type 23","type":"exact"}],"termid":"MONDO:0014525","terms_by_termid":{"MONDO:0014525":null},"xrefs":{"Monarch":{"xref_id":"0014525"}}}


id: PBO:0077632
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane O-mannosyltransferase targeting cadherins 4","termid":"PBO:0077632"}


id: GO:0042416
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of dopamine, a catecholamine neurotransmitter and a metabolic precursor of noradrenaline and adrenaline.","definition_xrefs":["GOC:jl","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dopamine metabolic process","termid":"GO:0042417"},{"relation_name":"is_a","term_name":"catecholamine biosynthetic process","termid":"GO:0042423"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dopamine biosynthetic process","synonyms":[{"name":"dopamine anabolism","type":"exact"},{"name":"dopamine biosynthesis","type":"exact"},{"name":"dopamine formation","type":"exact"},{"name":"dopamine synthesis","type":"exact"}],"termid":"GO:0042416"}


id: PBO:0066045
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAP1B pseudogene 1","termid":"PBO:0066045"}


id: MONDO:0015277
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neuroendocrine carcinoma arising from the C-cells of the thyroid gland. It is closely associated with multiple endocrine neoplasia syndromes. Approximately 10% to 20% of medullary thyroid carcinomas are familial. Patients usually present with a thyroid nodule that is painless and firm. In the majority of cases nodal involvement is present at diagnosis. Surgery is the preferred treatment for both primary lesions and recurrences. This carcinoma is generally not very sensitive to radiation and almost unresponsive to chemotherapy.","definition_xrefs":["NCIT:C3879"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuroendocrine carcinoma","termid":"MONDO:0002120"},{"relation_name":"is_a","term_name":"thyroid gland follicular carcinoma","termid":"MONDO:0005034"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"medullary thyroid gland carcinoma","secondary_identifiers":["SCTID:255032005","MedDRA:10027101","MEDGEN:66772","ONCOTREE:THME","DOID:3973","Orphanet:1332","HP:0002865","GARD:7004","icd11.foundation:578519098","NANDO:2201054","UMLS:C0238462"],"synonyms":[{"name":"C cell carcinoma","type":"exact"},{"name":"MTC","type":"exact"},{"name":"THME","type":"related"},{"name":"carcinoma of parafollicular cell","type":"exact"},{"name":"carcinoma, C-cell, malignant","type":"exact"},{"name":"medullary carcinoma","type":"exact"},{"name":"medullary carcinoma of the thyroid","type":"exact"},{"name":"medullary carcinoma of the thyroid gland","type":"exact"},{"name":"medullary carcinoma of thyroid","type":"exact"},{"name":"medullary carcinoma of thyroid gland","type":"exact"},{"name":"medullary thyroid cancer","type":"exact"},{"name":"medullary thyroid cancer (MTC)","type":"related"},{"name":"medullary thyroid carcinoma","type":"exact"},{"name":"medullary thyroid gland carcinoma","type":"exact"},{"name":"parafollicular cell carcinoma","type":"exact"},{"name":"thyroid cancer, medullary","type":"related"},{"name":"thyroid carcinoma, medullary","type":"related"},{"name":"thyroid gland medullary cancer","type":"exact"},{"name":"thyroid gland medullary carcinoma","type":"exact"},{"name":"thyroid gland neuroendocrine carcinoma","type":"exact"},{"name":"thyroid medullary carcinoma","type":"exact"},{"name":"ultimobranchial thyroid tumor","type":"exact"},{"name":"ultimobranchial thyroid tumour","type":"exact"}],"termid":"MONDO:0015277","xrefs":{"Monarch":{"xref_id":"0015277"}}}


id: GO:0031452
data:
  {"annotated_genes":["SJAG_02723","SJAG_04369","SJAG_03255"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107025,77650],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061188"},{"annotations":[108868],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060906"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of heterochromatin formation.","definition_xrefs":["PMID:16855380"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of gene expression","termid":"GO:0010628"},{"relation_name":"is_a","term_name":"regulation of heterochromatin formation","termid":"GO:0031445"},{"relation_name":"is_a","term_name":"negative regulation of chromatin organization","termid":"GO:1905268"},{"relation_name":"negatively_regulates","term_name":"heterochromatin formation","termid":"GO:0031507"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02723":null,"SJAG_03255":null,"SJAG_04369":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0006325"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006325"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0006325"],"is_obsolete":false,"name":"negative regulation of heterochromatin formation","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"chromatin decompaction","type":"exact"},{"name":"chromatin decondensation","type":"exact"},{"name":"down regulation of heterochromatin formation","type":"exact"},{"name":"down-regulation of heterochromatin formation","type":"exact"},{"name":"downregulation of heterochromatin formation","type":"exact"},{"name":"inhibition of heterochromatin formation","type":"narrow"},{"name":"negative regulation of heterochromatin assembly","type":"exact"}],"termid":"GO:0031452","terms_by_termid":{"GO:0060906":null,"GO:0061188":null}}


id: GO:0044808
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of oncostatin M due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:rv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine production","termid":"GO:0001816"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"oncostatin M production","synonyms":[{"name":"OSM production","type":"exact"}],"termid":"GO:0044808"}


id: PBO:0078225
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable 11-3","termid":"PBO:0078225"}


id: PBO:0055609
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3048","termid":"PBO:0055609"}


id: GO:1901817
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of beta-zeacarotene.","definition_xrefs":["UniPathway:UPA00805","GOC:yaf","PMID:3710717","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carotenoid catabolic process","termid":"GO:0016118"},{"relation_name":"is_a","term_name":"carotene catabolic process","termid":"GO:0016121"},{"relation_name":"is_a","term_name":"beta-zeacarotene metabolic process","termid":"GO:1901816"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"beta-zeacarotene catabolic process","synonyms":[{"name":"beta-zeacarotene breakdown","type":"exact"},{"name":"beta-zeacarotene catabolism","type":"exact"},{"name":"beta-zeacarotene degradation","type":"exact"}],"termid":"GO:1901817"}


id: PBO:0089613
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy associated HORMA domain protein Atg101","termid":"PBO:0089613"}


id: PBO:0116732
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BRF2 general transcription factor IIIB subunit","termid":"PBO:0116732"}


id: GO:0032810
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a sterol response element (SRE), a nonpalindromic sequence found in the promoters of genes involved in lipid metabolism.","definition_xrefs":["PMID:11994399","GOC:vk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II cis-regulatory region sequence-specific DNA binding","termid":"GO:0000978"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0000976"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0003677","GO:0000976"],"is_obsolete":false,"name":"sterol response element binding","synonyms":[{"name":"SRE binding","type":"exact"}],"termid":"GO:0032810"}


id: GO:1990646
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a prolactin stimulus.","definition_xrefs":["PMID:7760850"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to peptide hormone stimulus","termid":"GO:0071375"},{"relation_name":"is_a","term_name":"response to prolactin","termid":"GO:1990637"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to prolactin","termid":"GO:1990646"}


id: PBO:0081487
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 383","termid":"PBO:0081487"}


id: GO:0035333
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The proteolytic cleavages to the Notch protein that occur as a result of ligand binding. Ligand binding at the cell surface exposes an otherwise inaccessible cleavage site in the extracellular portion of Notch, which when cleaved releases a membrane-tethered form of the Notch intracellular domain. Subsequent cleavage within the transmembrane domain then leads to the release of the soluble Notch intracellular domain (NICD).","definition_xrefs":["PMID:12651094","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein intracellular domain proteolysis","termid":"GO:0031293"},{"relation_name":"part_of","term_name":"Notch signaling pathway","termid":"GO:0007219"},{"relation_name":"part_of","term_name":"Notch receptor processing","termid":"GO:0007220"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"Notch receptor processing, ligand-dependent","synonyms":[{"name":"Notch S2 cleavage","type":"narrow"},{"name":"Notch S3 cleavage","type":"narrow"}],"termid":"GO:0035333"}


id: PBO:0005279
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S. Pombe Centromere","termid":"PBO:0005279"}


id: MONDO:0016564
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"PSP-progressive non fluent aphasia (PSP-PNFA) is an atypical variant of progressive supranuclear palsy (PSP), a rare late-onset neurodegenerative disease. Unlike classic PSP (Richardson syndrome) patients present with an isolated speech production problem years before developing other motor features of PSP.","definition_xrefs":["Orphanet:240112"],"direct_ancestors":[{"relation_name":"is_a","term_name":"atypical progressive supranuclear palsy syndrome","termid":"MONDO:0020488"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"progressive supranuclear palsy-progressive non-fluent aphasia syndrome","secondary_identifiers":["UMLS:C5679850","GARD:20649","MEDGEN:1842806"],"synonyms":[{"name":"PSP-AOS","type":"exact"},{"name":"PSP-PNFA","type":"exact"},{"name":"progressive supranuclear palsy-apraxia of speech syndrome","type":"exact"}],"termid":"MONDO:0016564","xrefs":{"Monarch":{"xref_id":"0016564"}}}


id: SOFP:reported_pr_change
data:
  {"annotation_feature_type":"gene","cv_name":"feature_property","direct_ancestors":[{"relation_name":"is_a","term_name":"feature_property","termid":"SOFP:feature_property"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"reported_pr_change","termid":"SOFP:reported_pr_change"}


id: PBO:0012296
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-protein ligase E3 implicated in transcription (predicted)","termid":"PBO:0012296"}


id: GO:0016493
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a C-C chemokine and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity. C-C chemokines do not have an amino acid between the first two cysteines of the characteristic four-cysteine motif.","definition_xrefs":["GOC:signaling","PMID:8662823"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemokine receptor activity","termid":"GO:0004950"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"C-C chemokine receptor activity","termid":"GO:0016493"}


id: PBO:0061471
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NRBF2 pseudogene 6","termid":"PBO:0061471"}


id: PBO:0074442
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small integral membrane protein 43","termid":"PBO:0074442"}


id: PBO:0062049
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily U member 1 pseudogene","termid":"PBO:0062049"}


id: PBO:0048778
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"guanine monophosphate synthase","termid":"PBO:0048778"}


id: FYPO:0004532
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  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which progression through the mitotic cell cycle is arrested in M phase under conditions where arrest does not normally occur, and the position or morphology of the mitotic spindle is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic spindle","termid":"FYPO:0000338"},{"relation_name":"is_a","term_name":"abnormal cell cycle arrest in mitotic M phase","termid":"FYPO:0000608"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000120"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000631","FYPO:0000120","FYPO:0000054","FYPO:0005447","FYPO:0002399","FYPO:0000002"],"is_obsolete":false,"name":"abnormal cell cycle arrest in mitotic M phase with abnormal spindle","synonyms":[{"name":"abnormal cell cycle arrest in mitotic M phase with abnormal mitotic spindle","type":"exact"},{"name":"abnormal cell cycle arrest in mitotic M phase with abnormal spindle during vegetative growth","type":"exact"},{"name":"abnormal cell cycle arrest in mitotic M phase with condensed chromosomes and abnormal spindle","type":"related"},{"name":"abnormal mitotic cell cycle arrest in M phase with abnormal spindle","type":"exact"}],"termid":"FYPO:0004532"}


id: GO:0050311
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  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: hydrogen sulfide + 3 oxidized ferredoxin + 3 H2O = sulfite + 3 reduced ferredoxin.","definition_xrefs":["EC:1.8.7.1","MetaCyc:SULFITE-REDUCTASE-FERREDOXIN-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on a sulfur group of donors, iron-sulfur protein as acceptor","termid":"GO:0016673"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"sulfite reductase (ferredoxin) activity","secondary_identifiers":["RHEA:23132"],"synonyms":[{"name":"ferredoxin-sulfite reductase activity","type":"related"},{"name":"hydrogen-sulfide:ferredoxin oxidoreductase activity","type":"related"},{"name":"sulphite reductase (ferredoxin) activity","type":"exact"}],"termid":"GO:0050311"}


id: GO:0010837
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of keratinocyte proliferation. Keratinocyte proliferation is the multiplication or reproduction of keratinocytes, resulting in the expansion of a cell population.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of epithelial cell proliferation","termid":"GO:0050678"},{"relation_name":"regulates","term_name":"keratinocyte proliferation","termid":"GO:0043616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of keratinocyte proliferation","termid":"GO:0010837"}


id: PBO:0079608
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 G2","termid":"PBO:0079608"}


id: GO:0055019
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of cardiac muscle fiber development.","definition_xrefs":["GOC:vk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell development","termid":"GO:0010721"},{"relation_name":"is_a","term_name":"negative regulation of striated muscle cell differentiation","termid":"GO:0051154"},{"relation_name":"is_a","term_name":"regulation of cardiac muscle fiber development","termid":"GO:0055018"},{"relation_name":"negatively_regulates","term_name":"cardiac muscle cell development","termid":"GO:0055013"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cardiac muscle fiber development","synonyms":[{"name":"down regulation of cardiac muscle fiber development","type":"exact"},{"name":"down-regulation of cardiac muscle fiber development","type":"exact"},{"name":"downregulation of cardiac muscle fiber development","type":"exact"},{"name":"inhibition of cardiac muscle fiber development","type":"narrow"},{"name":"negative regulation of cardiac muscle fibre development","type":"exact"},{"name":"negative regulation of heart muscle fiber development","type":"related"}],"termid":"GO:0055019"}


id: GO:1901136
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id: PBO:0046142
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 5B","termid":"PBO:0046142"}


id: GO:0075217
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of spore encystment on host. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell development","termid":"GO:0010721"},{"relation_name":"is_a","term_name":"modulation of spore encystment on host","termid":"GO:0075215"},{"relation_name":"negatively_regulates","term_name":"spore encystment","termid":"GO:0075214"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of spore encystment on host","termid":"GO:0075217"}


id: PBO:0051431
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable 3-12","termid":"PBO:0051431"}


id: MONDO:0100022
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erm":"MONDO:0026771"},{"annotations":[85722],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030059"},{"annotations":[86522],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013254"},{"annotations":[87261],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010466"}]},"cv_name":"mondo","definition":"An epilepsy sydrome that has an onset during the neonatal or infantile stage of life.","direct_ancestors":[{"relation_name":"is_a","term_name":"epilepsy 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epilepsy syndrome","references_by_uniquename":{"PB_REF:0000006":null},"termid":"MONDO:0100022","terms_by_termid":{"MONDO:0010466":null,"MONDO:0010472":null,"MONDO:0012245":null,"MONDO:0012812":null,"MONDO:0013254":null,"MONDO:0013389":null,"MONDO:0014150":null,"MONDO:0014199":null,"MONDO:0014392":null,"MONDO:0014593":null,"MONDO:0014598":null,"MONDO:0014625":null,"MONDO:0014647":null,"MONDO:0014719":null,"MONDO:0014868":null,"MONDO:0014895":null,"MONDO:0014933":null,"MONDO:0015000":null,"MONDO:0015025":null,"MONDO:0020630":null,"MONDO:0020632":null,"MONDO:0023659":null,"MONDO:0026771":null,"MONDO:0029138":null,"MONDO:0030059":null,"MONDO:0030881":null,"MONDO:0031021":null,"MONDO:0031028":null,"MONDO:0031055":null,"MONDO:0032752":null,"MONDO:0032768":null,"MONDO:0032808":null,"MONDO:0032822":null,"MONDO:0032858":null,"MONDO:0032880":null,"MONDO:0032895":null,"MONDO:0033362":null,"MONDO:0033364":null,"MONDO:0033365":null,"MONDO:0034106":null,"MONDO:0859325":null,"MONDO:0957248":null,"MONDO:0957780":null,"MONDO:0958330":null,"MONDO:0968946":null},"xrefs":{"Monarch":{"xref_id":"0100022"}}}


id: GO:0051339
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of lyase activity, the catalysis of the cleavage of C-C, C-O, C-N and other bonds by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond. They differ from other enzymes in that two substrates are involved in one reaction direction, but only one in the other direction. When acting on the single substrate, a molecule is eliminated and this generates either a new double bond or a new ring.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of lyase activity (obsolete GO:0051339)","synonyms":[{"name":"lyase regulator","type":"exact"}],"termid":"GO:0051339"}


id: PBO:0052105
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium voltage-gated channel subfamily A member 10","termid":"PBO:0052105"}


id: PBO:0017954
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial respiratory chain complex II assembly ACN9 family protein Sdh7 (predicted)","termid":"PBO:0017954"}


id: PATO:0001805
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A texture quality inhering in a bearer by virtue of the bearer's formed or tending to form flakes or thin, crisp fragments.","definition_xrefs":["answers.com:answers.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"texture","termid":"PATO:0000150"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"flaky","termid":"PATO:0001805"}


id: GO:1990412
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: hercynylselenocysteine + 2H+ = selenoneine + pyruvate + ammonium.","definition_xrefs":["PMID:24828577"],"gene_count":0,"genotype_count":0,"name":"obsolete hercynylselenocysteine lyase activity (selenoneine-forming) (obsolete GO:1990412)","termid":"GO:1990412"}


id: GO:0033235
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the addition of SUMO groups to a protein.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein sumoylation","termid":"GO:0033233"},{"relation_name":"is_a","term_name":"positive regulation of protein modification by small protein conjugation or removal","termid":"GO:1903322"},{"relation_name":"positively_regulates","term_name":"protein sumoylation","termid":"GO:0016925"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0070647"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0070647"}],"interesting_parent_ids":["GO:0070647","GO:0008150"],"is_obsolete":false,"name":"positive regulation of protein sumoylation","synonyms":[{"name":"positive regulation of sumoylation","type":"exact"}],"termid":"GO:0033235"}


id: MONDO:0019396
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare glomerular disease characterized by abnormal accumulation of type III collagen within the mesangium and subendothelial space of the glomerulus. Clinically it usually manifests with proteinuria (often in the nephrotic range), microscopic hematuria, peripheral edema and/or hypertension. In some cases progression to end-stage renal failure is observed.","definition_xrefs":["Orphanet:84087"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete secondary glomerular disease (obsolete MONDO:0019724)","termid":"MONDO:0019724"},{"relation_name":"is_a","term_name":"glomerular disorder","termid":"MONDO:0019722"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"collagen type III glomerulopathy","secondary_identifiers":["GARD:19048","SCTID:708127008","UMLS:C3872695","ICD9:583.89","MEDGEN:836996"],"synonyms":[{"name":"Collagenofibrotic glomerulopathy","type":"exact"}],"termid":"MONDO:0019396","xrefs":{"Monarch":{"xref_id":"0019396"}}}


id: GO:0033561
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process that modulates the rate or extent of water loss from an organism via the skin.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of water loss via skin (obsolete GO:0033561)","synonyms":[{"name":"skin barrier function","type":"related"}],"termid":"GO:0033561"}


id: GO:0004310
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2 farnesyl diphosphate = diphosphate + presqualene diphosphate.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete farnesyl-diphosphate farnesyltransferase activity (obsolete GO:0004310)","secondary_identifiers":["Reactome:R-HSA-191402","Reactome:R-HSA-191405"],"termid":"GO:0004310"}


id: MONDO:0005764
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm composed of spindle to ovoid cells which have morphologic and immunophenotypic characteristics of follicular dendritic cells. It affects lymph nodes and other sites including the tonsils, gastrointestinal tract, spleen, liver, soft tissues, skin, and oral cavity. It usually behaves as a low grade sarcoma. Treatment options include complete surgical removal of the tumor with or without adjuvant chemotherapy or radiotherapy. Recurrences have been reported in up to half of the cases.","definition_xrefs":["NCIT:C9281"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dendritic cell sarcoma","termid":"MONDO:0004380"},{"relation_name":"is_a","term_name":"Epstein-Barr virus-associated mesenchymal tumor","termid":"MONDO:0017345"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046","MONDO:0004992"],"is_obsolete":false,"name":"follicular dendritic cell sarcoma","secondary_identifiers":["EFO:0007276","ICDO:9758/1","ICDO:9758/3","ONCOTREE:FDCS","icd11.foundation:149373156","Orphanet:86902","MESH:D054740","GARD:19081","icd11.foundation:15445528","NANDO:2200034","UMLS:C1260325","MEDGEN:220355","DOID:6262"],"synonyms":[{"name":"follicular Dendritic cell sarcoma","type":"exact"},{"name":"follicular Dendritic cell sarcoma/tumor","type":"exact"},{"name":"follicular dendritic cell sarcoma","type":"exact"},{"name":"follicular dendritic cell tumor","type":"exact"},{"name":"follicular dendritic cell tumour","type":"exact"},{"name":"sarcoma of follicular dendritic cell","type":"exact"}],"termid":"MONDO:0005764","xrefs":{"Monarch":{"xref_id":"0005764"}}}


id: GO:0010956
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that decreases the rate, frequency or extent of calcidiol 1-monooxygenase activity. Calcidiol 1-monooxygenase activity is the catalysis of the reaction: calcidiol + NADPH + H+ + O2 = calcitriol + NADP+ + H2O.","definition_xrefs":["GOC:tb","GOC:BHF","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of calcidiol 1-monooxygenase activity (obsolete GO:0010956)","termid":"GO:0010956"}


id: PBO:0067197
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 261, pseudogene","termid":"PBO:0067197"}


id: GO:0007029
data:
  {"annotated_genes":["SJAG_02437","SJAG_00053","SJAG_01168","SJAG_01240","SJAG_05289","SJAG_01127","SJAG_01999","SJAG_03812","SJAG_04413","SJAG_01437","SJAG_03865","SJAG_00959","SJAG_04417","SJAG_02683","SJAG_02595","SJAG_00064","SJAG_03247","SJAG_02914","SJAG_04684","SJAG_02626","SJAG_01496","SJAG_04338","SJAG_01178","SJAG_01940","SJAG_03170","SJAG_01460","SJAG_02065","SJAG_01116","SJAG_04221","SJAG_00277","SJAG_01782","SJAG_02330","SJAG_04294","SJAG_05414","SJAG_01223","SJAG_01848","SJAG_03795","SJAG_00603","SJAG_03558","SJAG_01564","SJAG_02208","SJAG_03315","SJAG_02763","SJAG_03930"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[75184,101928],"is_not":false,"summary":null,"term":"GO:0007029"},{"annotations":[78785],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"GO:0016320"},{"annotations":[72277,73938,90770,94036,119504,74657],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0090158"},{"annotations":[64787],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071788"},{"annotations":[108938,115351,118973,103821,109019],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"GO:1990809"},{"annotations":[60593,97814,61500,62365,72278,91846,112046,118545,90771],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0061817"},{"annotations":[104739,90772],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0051685"},{"annotations":[64785],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1903373"},{"annotations":[108776,95199,98951,98719,112638,108688,101553,104847,103876,92030,98409,109715,114773,106543,114220,110782,68309,105152],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0045048"},{"annotations":[115476,88280,75424,73223,114511],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0071816"},{"annotations":[107399,115587],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990854"}]},"cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the endoplasmic reticulum.","definition_xrefs":["GOC:dph","GOC:jl","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle organization","termid":"GO:0006996"},{"relation_name":"part_of","term_name":"endomembrane system organization","termid":"GO:0010256"}],"gene_count":44,"genes_by_uniquename":{"SJAG_00053":null,"SJAG_00064":null,"SJAG_00277":null,"SJAG_00603":null,"SJAG_00959":null,"SJAG_01116":null,"SJAG_01127":null,"SJAG_01168":null,"SJAG_01178":null,"SJAG_01223":null,"SJAG_01240":null,"SJAG_01437":null,"SJAG_01460":null,"SJAG_01496":null,"SJAG_01564":null,"SJAG_01782":null,"SJAG_01848":null,"SJAG_01940":null,"SJAG_01999":null,"SJAG_02065":null,"SJAG_02208":null,"SJAG_02330":null,"SJAG_02437":null,"SJAG_02595":null,"SJAG_02626":null,"SJAG_02683":null,"SJAG_02763":null,"SJAG_02914":null,"SJAG_03170":null,"SJAG_03247":null,"SJAG_03315":null,"SJAG_03558":null,"SJAG_03795":null,"SJAG_03812":null,"SJAG_03865":null,"SJAG_03930":null,"SJAG_04221":null,"SJAG_04294":null,"SJAG_04338":null,"SJAG_04413":null,"SJAG_04417":null,"SJAG_04684":null,"SJAG_05289":null,"SJAG_05414":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"endoplasmic reticulum organization","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null,"PMID:26774782":null},"synonyms":[{"name":"ER organisation","type":"exact"},{"name":"ER organization and biogenesis","type":"related"},{"name":"endoplasmic reticulum morphology","type":"related"},{"name":"endoplasmic reticulum organisation","type":"exact"},{"name":"endoplasmic reticulum organization and biogenesis","type":"related"}],"termid":"GO:0007029","terms_by_termid":{"GO:0007029":null,"GO:0016320":null,"GO:0045048":null,"GO:0051685":null,"GO:0061817":null,"GO:0071788":null,"GO:0071816":null,"GO:0090158":null,"GO:1903373":null,"GO:1990809":null,"GO:1990854":null}}


id: MONDO:0012691
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Noonan syndrome with multiple lentigines in which the cause of the disease is a mutation in the RAF1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Noonan syndrome with multiple lentigines","termid":"MONDO:0007893"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0005267"],"is_obsolete":false,"name":"LEOPARD syndrome 2","secondary_identifiers":["GARD:15518","MEDGEN:370588","MESH:C537117","OMIM:611554","UMLS:C1969056","DOID:0080549"],"synonyms":[{"name":"LEOPARD syndrome 2","type":"exact"},{"name":"LPRD2","type":"related"},{"name":"Leopard syndrome type 2","type":"exact"},{"name":"leopard syndrome 2","type":"exact"}],"termid":"MONDO:0012691","xrefs":{"Monarch":{"xref_id":"0012691"}}}


id: PBO:0113263
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phosphatidylinositol 3-phosphate binding protein; forms a distinct complex with TORC1, induced by glutamine in a dose-dependent manner, resulting in TORC1 activation, suggesting dual roles as both a glutamine sensor and a direct TORC1 activator; functions as a cysteine sensor involved in TORC1 activation; involved in leucine- and glutamine-responsive TORC1 activation, independent of the Gtr/Ego pathway; related to human PLEKHF1; contains a PI3P binding FYVE domain; similar to Fab1p and Vps27p","termid":"PBO:0113263"}


id: PBO:0069605
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 882, pseudogene","termid":"PBO:0069605"}


id: MOD:01564
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom of a protein N-terminal with the Applied Biosystems iTRAQ8plex-118 reporter+balance group.","definition_xrefs":["Unimod:731#N-term"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iTRAQ8plex-118 reporter+balance reagent acylated residue","termid":"MOD:01563"},{"relation_name":"is_a","term_name":"iTRAQ8plex reporter+balance reagent acylated N-terminal","termid":"MOD:01712"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iTRAQ8plex-118 reporter+balance reagent acylated N-terminal","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"},{"name":"Accurate mass for 115, 118, 119 & 121","type":"related"},{"name":"Applied Biosystems iTRAQ(TM) multiplexed quantitation chemistry","type":"related"},{"name":"iTRAQ8plex:13C(6)15N(2)","type":"related"}],"termid":"MOD:01564"}


id: PBO:0110306
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial [2Fe-2S] cluster assembly ferredoxin Etp1/ heme O monooxygenase Cox15, fusion protein","termid":"PBO:0110306"}


id: GO:0102400
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2 S-adenosyl-L-methionine + dTDP-3-amino-4-dehydro-2,3,6-trideoxy-alpha-D-glucose = 2 S-adenosyl-L-homocysteine + dTDP-3-N,N-dimethylamino-4-oxo-2,3,6-trideoxy-alpha-D-glucose + 2 H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete dTDP-3-amino-4-oxo-2,3,6-trideoxy-alpha-D-glucose N,N-dimethyltransferase activity (obsolete GO:0102400)","termid":"GO:0102400"}


id: GO:0098896
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer surrounding a postsynaptic early endosome.","definition_xrefs":["GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"early endosome membrane","termid":"GO:0031901"},{"relation_name":"is_a","term_name":"postsynaptic endosome membrane","termid":"GO:0098895"},{"relation_name":"part_of","term_name":"postsynaptic early endosome","termid":"GO:0098842"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005768"},{"rel_name":"part_of","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0005575","GO:0031410","GO:0005737","GO:0005768"],"is_obsolete":false,"name":"postsynaptic early endosome membrane","termid":"GO:0098896"}


id: PBO:0078431
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gly (anticodon TCC) 2-1","termid":"PBO:0078431"}


id: MONDO:0008739
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"agenesis of cerebral white matter","secondary_identifiers":["UMLS:C1859969","OMIM:202600","MEDGEN:347986"],"synonyms":[{"name":"agenesis of cerebral white matter","type":"exact"}],"termid":"MONDO:0008739","xrefs":{"Monarch":{"xref_id":"0008739"}}}


id: PBO:0060080
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND5 pseudogene 27","termid":"PBO:0060080"}


id: PBO:0110240
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rixosome coplex/Las1 complex polynucleotide 5'-hydroxyl-kinase Grc3","termid":"PBO:0110240"}


id: SO:0000454
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A 17-28-nt, small interfering RNA derived from transcripts of repetitive elements.","definition_xrefs":["PMID:18032451"],"direct_ancestors":[{"relation_name":"is_a","term_name":"piRNA","termid":"SO:0001035"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rasiRNA","synonyms":[{"name":"INSDC_feature:ncRNA","type":"broad"},{"name":"INSDC_qualifier:rasiRNA","type":"exact"},{"name":"repeat associated small interfering RNA","type":"exact"}],"termid":"SO:0000454"}


id: GO:0080016
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-trans,6-trans-farnesyl diphosphate = (-)-E-beta-caryophyllene + diphosphate.","definition_xrefs":["MetaCyc:RXN-8414","PMID:12566586","PMID:9442047"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclase activity","termid":"GO:0009975"},{"relation_name":"is_a","term_name":"sesquiterpene synthase activity","termid":"GO:0010334"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0009975"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0009975","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"(-)-E-beta-caryophyllene synthase activity","secondary_identifiers":["EC:4.2.3.57","RHEA:28294"],"termid":"GO:0080016"}


id: PBO:0028387
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_methylglyoxal","termid":"PBO:0028387"}


id: PBO:0067267
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 341, pseudogene","termid":"PBO:0067267"}


id: MONDO:0019352
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete sporotrichosis (obsolete MONDO:0019352)","termid":"MONDO:0019352","xrefs":{"Monarch":{"xref_id":"0019352"}}}


id: GO:0045931
data:
  {"annotated_genes":["SJAG_00883","SJAG_04573","SJAG_01825","SJAG_02380","SJAG_01297","SJAG_02074","SJAG_04597","SJAG_01801","SJAG_03699","SJAG_01901","SJAG_03592","SJAG_03309","SJAG_04968","SJAG_01679","SJAG_02451","SJAG_03048","SJAG_03695","SJAG_01000","SJAG_03160","SJAG_04813","SJAG_00256","SJAG_02498","SJAG_01401","SJAG_02592","SJAG_00117","SJAG_04259","SJAG_02336","SJAG_01311","SJAG_02810","SJAG_03353","SJAG_03067","SJAG_04140","SJAG_01456","SJAG_00214","SJAG_01805","SJAG_00666","SJAG_03591","SJAG_01210","SJAG_04332","SJAG_00457","SJAG_00216","SJAG_03681","SJAG_02723","SJAG_03371","SJAG_00082","SJAG_04486","SJAG_02342","SJAG_03602","SJAG_02332","SJAG_02169","SJAG_03126","SJAG_02404","SJAG_03486","SJAG_01837"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[114651,116281,91085,107600,114164,108630,104255,112344,99951],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902426"},{"annotations":[106182,102723,104805,106345,109645,107021,118750],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0110045"},{"annotations":[94563],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140499"},{"annotations":[112422,117661,103688],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903468"},{"annotations":[90359,102733,112346,94116],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031536"},{"annotations":[102734,106186,106346,109563,107028,117455],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1900087"},{"annotations":[116868,73912,88406,108952,107603,117058,71189,92097,99359,110725,94773,111583,102119,103855,88415,94167,92501,94734,98787],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010971"},{"annotations":[101750,88207],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905287"},{"annotations":[102739],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903465"},{"annotations":[100505,102741,111758,98057,102468,115151,94170],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045842"},{"annotations":[111819],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0110161"},{"annotations":[92109,109274,77108,116285,75180,115723],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007089"}]},"cv_name":"biological_process","definition":"Any 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regulation of mitotic cell cycle","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"activation of progression through mitotic cell cycle","type":"narrow"},{"name":"positive regulation of mitotic cell cycle progression","type":"exact"},{"name":"positive regulation of progression through mitotic cell cycle","type":"exact"},{"name":"stimulation of progression through mitotic cell cycle","type":"narrow"},{"name":"up regulation of progression through mitotic cell cycle","type":"exact"},{"name":"up-regulation of progression through mitotic cell cycle","type":"exact"},{"name":"upregulation of progression through mitotic cell cycle","type":"exact"}],"termid":"GO:0045931","terms_by_termid":{"GO:0007089":null,"GO:0010971":null,"GO:0031536":null,"GO:0045842":null,"GO:0110045":null,"GO:0110161":null,"GO:0140499":null,"GO:1900087":null,"GO:1902426":null,"GO:1903465":null,"GO:1903468":null,"GO:1905287":null}}


id: PBO:0068470
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 47, pseudogene","termid":"PBO:0068470"}


id: PBO:0063735
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prohibitin 1","termid":"PBO:0063735"}


id: PBO:0046579
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group K member 21, envelope","termid":"PBO:0046579"}


id: MONDO:0011479
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A condition characterized by development of symptoms while standing. It is an autonomic nervous system disorder and the symptoms are relieved once the person sits back down. Symptoms include heart.","definition_xrefs":["EFO:1000645"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heart conduction disease","termid":"MONDO:0000992"},{"relation_name":"is_a","term_name":"inherited orthostatic hypotension","termid":"MONDO:0021272"},{"relation_name":"is_a","term_name":"cardiogenetic disease","termid":"MONDO:0100547"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"postural orthostatic tachycardia syndrome","secondary_identifiers":["MESH:D054972","NCIT:C85020","DOID:0111154","GARD:13591","UMLS:C1299624","icd11.foundation:1533647472","MEDGEN:226970","OMIM:604715","Orphanet:443236","SCTID:371073003"],"synonyms":[{"name":"POTS","type":"exact"},{"name":"Soldiers heart","type":"related"},{"name":"familial orthostatic tachycardia due to norepinephrine transporter deficiency","type":"exact"},{"name":"irritable heart","type":"exact"},{"name":"neurocirculatory asthenia","type":"related"},{"name":"orhtostatic intolerance","type":"exact"},{"name":"orthostatic intolerance","type":"related"},{"name":"orthostatic intolerance due to NET deficiency","type":"exact"},{"name":"postural tachycardia syndrome due to NET deficiency","type":"exact"},{"name":"soldiers heart","type":"exact"}],"termid":"MONDO:0011479","xrefs":{"Monarch":{"xref_id":"0011479"}}}


id: GO:0002860
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of natural killer cell mediated cytotoxicity directed against tumor cell target.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of natural killer cell mediated immune response to tumor cell","termid":"GO:0002857"},{"relation_name":"is_a","term_name":"regulation of natural killer cell mediated cytotoxicity directed against tumor cell target","termid":"GO:0002858"},{"relation_name":"is_a","term_name":"positive regulation of natural killer cell mediated cytotoxicity","termid":"GO:0045954"},{"relation_name":"positively_regulates","term_name":"natural killer cell mediated cytotoxicity directed against tumor cell target","termid":"GO:0002420"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of natural killer cell mediated cytotoxicity directed against tumor cell target","synonyms":[{"name":"activation of natural killer cell mediated cytotoxicity directed against tumor cell target","type":"narrow"},{"name":"stimulation of natural killer cell mediated cytotoxicity directed against tumor cell target","type":"narrow"},{"name":"up regulation of natural killer cell mediated cytotoxicity directed against tumor cell target","type":"exact"},{"name":"up-regulation of natural killer cell mediated cytotoxicity directed against tumor cell target","type":"exact"},{"name":"upregulation of natural killer cell mediated cytotoxicity directed against tumor cell target","type":"exact"}],"termid":"GO:0002860"}


id: MONDO:0007355
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Uveal coloboma-cleft lip and palate-intellectual disability is characterized by coloboma of the iris, bilateral cleft lip and palate, and intellectual deficiency of varying degree. A wide variability in clinical expression is observed. Some patients also present with microphthalmia, cataract, glaucoma, ptosis, sensorineural hearing loss and haematuria. To date, 12 cases have been described from three generations of a single family. Transmission is autosomal dominant.","definition_xrefs":["Orphanet:1473"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uveal coloboma-cleft lip and palate-intellectual disability","secondary_identifiers":["DOID:0111249","GARD:1440","MEDGEN:811762","OMIM:120433","UMLS:C3805432","MESH:C535971"],"synonyms":[{"name":"COB1","type":"related"},{"name":"coloboma, cleft lip/palate and intellectual disability syndrome","type":"related"},{"name":"coloboma, cleft lip/palate and mental retardation syndrome","type":"related"},{"name":"coloboma, ocular, with or without hearing impairment, cleft lip/palate, and/or intellectual disability","type":"related"},{"name":"coloboma, ocular, with or without hearing impairment, cleft lip/palate, and/or mental retardation","type":"related"},{"name":"coloboma-microphthalmos syndrome","type":"related"},{"name":"coloboma-microphthalmos syndrome associated with sensorineural hearing loss, hematuria, and cleft lip/palate","type":"related"},{"name":"uveal coloboma-cleft lip and palate-intellectual disability","type":"exact"},{"name":"uveal coloboma-cleft lip/palate-intellectual disability syndrome","type":"related"},{"name":"uveal coloboma-cleft lip/palate-mental retardation syndrome","type":"related"}],"termid":"MONDO:0007355","xrefs":{"Monarch":{"xref_id":"0007355"}}}


id: PBO:0082711
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the mitochondrial TIM22 complex; involved in insertion of polytopic proteins into the inner membrane","termid":"PBO:0082711"}


id: PR:O42667
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ssm4 gene.","definition_xrefs":["UniProtKB:O42667","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microtubule-associated protein ssm4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC27D7.13c","synonyms":[{"name":"Spom972h-ssm4","type":"exact"}],"termid":"PR:O42667"}


id: GO:1901784
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving p-cresol.","definition_xrefs":["GOC:yaf","GOC:TermGenie","PMID:10623531"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cresol metabolic process","termid":"GO:0042212"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"p-cresol metabolic process","synonyms":[{"name":"p-cresol metabolism","type":"exact"}],"termid":"GO:1901784"}


id: GO:0031903
data:
  {"annotated_genes":["SJAG_00891","SJAG_02619","SJAG_00947","SJAG_03440","SJAG_04315","SJAG_03493","SJAG_02997","SJAG_01685","SJAG_03464","SJAG_05950","SJAG_03715","SJAG_04428","SJAG_03781","SJAG_04146","SJAG_03324","SJAG_02693","SJAG_01165","SJAG_00702","SJAG_04763"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[116142,74179,97313,80548,78110,79918,58802,115683,90788,73749,118559,78854,75913,78393,76126,70997,72141,98929,107061],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005778"}]},"cv_name":"cellular_component","definition":"The lipid bilayer surrounding a microbody.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microbody","termid":"GO:0042579"},{"relation_name":"is_a","term_name":"bounding membrane of organelle","termid":"GO:0098588"},{"relation_name":"part_of","term_name":"microbody","termid":"GO:0042579"}],"gene_count":19,"genes_by_uniquename":{"SJAG_00702":null,"SJAG_00891":null,"SJAG_00947":null,"SJAG_01165":null,"SJAG_01685":null,"SJAG_02619":null,"SJAG_02693":null,"SJAG_02997":null,"SJAG_03324":null,"SJAG_03440":null,"SJAG_03464":null,"SJAG_03493":null,"SJAG_03715":null,"SJAG_03781":null,"SJAG_04146":null,"SJAG_04315":null,"SJAG_04428":null,"SJAG_04763":null,"SJAG_05950":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"microbody membrane","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0031903","terms_by_termid":{"GO:0005778":null}}


id: GO:0019377
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of glycolipid, a class of 1,2-di-O-acylglycerols joined at oxygen 3 by a glycosidic linkage to a carbohydrate part (usually a mono-, di- or tri-saccharide).","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycolipid metabolic process","termid":"GO:0006664"},{"relation_name":"is_a","term_name":"membrane lipid catabolic process","termid":"GO:0046466"},{"relation_name":"is_a","term_name":"carbohydrate derivative catabolic process","termid":"GO:1901136"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"glycolipid catabolic process","synonyms":[{"name":"glycolipid breakdown","type":"exact"},{"name":"glycolipid catabolism","type":"exact"},{"name":"glycolipid degradation","type":"exact"}],"termid":"GO:0019377"}


id: GO:1902047
data:
  {"annotated_genes":["SJAG_04134","SJAG_04469","SJAG_02125","SJAG_02060","SJAG_02344","SJAG_02059"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102964],"is_not":false,"summary":null,"term":"GO:1902047"},{"annotations":[106765],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1902267"},{"annotations":[57965,111317,117731],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903711"},{"annotations":[111318,69328,117732],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903710"}]},"cv_name":"biological_process","definition":"The process in which a polyamine macromolecule is transported across a membrane.","definition_xrefs":["GOC:TermGenie","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyamine transport","termid":"GO:0015846"},{"relation_name":"is_a","term_name":"transmembrane transport","termid":"GO:0055085"}],"gene_count":6,"genes_by_uniquename":{"SJAG_02059":null,"SJAG_02060":null,"SJAG_02125":null,"SJAG_02344":null,"SJAG_04134":null,"SJAG_04469":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"polyamine transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"secondary_identifiers":["GO:1905122"],"synonyms":[{"name":"polyamine import","type":"related"},{"name":"polyamine uptake","type":"related"}],"termid":"GO:1902047","terms_by_termid":{"GO:1902047":null,"GO:1902267":null,"GO:1903710":null,"GO:1903711":null}}


