# terms

id: PBO:0057460
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 579","termid":"PBO:0057460"}


id: MONDO:0001826
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete hypobetalipoproteinemia (obsolete MONDO:0001826)","termid":"MONDO:0001826","xrefs":{"Monarch":{"xref_id":"0001826"}}}


id: GO:0018641
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 6-hydroxy-3-methyl-2-oxo-1,2-dihydroquinoline + O2 + 2 H+ + 2 e- = H2O + 5,6-dihydroxy-3-methyl-2-oxo-1,2-dihydroquinoline.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 6-hydroxy-3-methyl-2-oxo-1,2-dihydroquinoline 6-monooxygenase activity (obsolete GO:0018641)","termid":"GO:0018641"}


id: PBO:0070464
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L4 pseudogene 7","termid":"PBO:0070464"}


id: PBO:0063066
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proapoptotic nucleolar protein 1","termid":"PBO:0063066"}


id: GO:0006954
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The process is characterized by local vasodilation, extravasation of plasma into intercellular spaces and accumulation of white blood cells and macrophages.","definition_xrefs":["ISBN:0198506732","GO_REF:0000022"],"direct_ancestors":[{"relation_name":"is_a","term_name":"defense response","termid":"GO:0006952"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"inflammatory response","secondary_identifiers":["Wikipedia:Inflammation"],"synonyms":[{"name":"inflammation","type":"broad"}],"termid":"GO:0006954"}


id: PBO:0062968
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"poly(A) binding protein cytoplasmic 1 pseudogene 11","termid":"PBO:0062968"}


id: GO:0000939
data:
  {"annotated_genes":["SJAG_03681","SJAG_03220","SJAG_01837","SJAG_01278","SJAG_04696","SJAG_02513","SJAG_03619","SJAG_00684","SJAG_00350","SJAG_01082","SJAG_01228","SJAG_04040","SJAG_04255","SJAG_01928","SJAG_02664","SJAG_04581","SJAG_03989","SJAG_04177"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[99623,110690,112564,113603,114872,116276,117044],"is_not":false,"summary":null,"term":"GO:0000939"},{"annotations":[61961,90049,90400,94663,95058,98262,105914,113932,106735,113493,114516],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031511"}]},"cv_name":"cellular_component","definition":"The region of a kinetochore closest to centromeric DNA which contains many CENP proteins organized in various subcomplexes including CENP-C, CENP-LN, CENP-HIKM, CENP-OPQUR and CENP-TWSX, but excluding the CENP-A containing heterochromatin.","definition_xrefs":["PMID:32516549","PMID:10619130","PMID:11483983","GOC:clt"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"kinetochore","termid":"GO:0000776"}],"gene_count":18,"genes_by_uniquename":{"SJAG_00350":null,"SJAG_00684":null,"SJAG_01082":null,"SJAG_01228":null,"SJAG_01278":null,"SJAG_01837":null,"SJAG_01928":null,"SJAG_02513":null,"SJAG_02664":null,"SJAG_03220":null,"SJAG_03619":null,"SJAG_03681":null,"SJAG_03989":null,"SJAG_04040":null,"SJAG_04177":null,"SJAG_04255":null,"SJAG_04581":null,"SJAG_04696":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0000776"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0000776","GO:0032991","GO:0005694"],"is_obsolete":false,"name":"inner kinetochore","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0000941"],"synonyms":[{"name":"condensed chromosome inner kinetochore","type":"exact"},{"name":"condensed nuclear chromosome inner kinetochore","type":"exact"},{"name":"inner centromere core complex","type":"related"},{"name":"inner kinetochore of condensed chromosome","type":"exact"},{"name":"inner kinetochore of condensed nuclear chromosome","type":"exact"},{"name":"inner kinetochore plate","type":"narrow"}],"termid":"GO:0000939","terms_by_termid":{"GO:0000939":null,"GO:0031511":null}}


id: GO:0019235
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events required for an organism to receive a slow pain stimulus, convert it to a molecular signal, and recognize and characterize the signal. This is a neurological process. Slow pain is often subjectively described as an aching or throbbing pain; in humans, the signals from a slow pain stimulus are perceived and relayed along unmyelinated C fibers to the central nervous system, reaching their target in about 1 second. Slow pain is often associated with tissue destruction.","definition_xrefs":["PMID:38704307"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensory perception of pain","termid":"GO:0019233"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sensory perception of slow pain","termid":"GO:0019235"}


id: MONDO:0859295
data:
  {"annotated_genes":["SJAG_02467"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86140],"is_not":false,"summary":null,"term":"MONDO:0859295"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02467":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with short stature, prominent forehead, and feeding difficulties","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0070479","MEDGEN:1824001","UMLS:C5774228","OMIM:620070"],"termid":"MONDO:0859295","terms_by_termid":{"MONDO:0859295":null},"xrefs":{"Monarch":{"xref_id":"0859295"}}}


id: PBO:0045526
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DTWD1 pseudogene 2","termid":"PBO:0045526"}


id: FYPO:0004303
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which a phosphatase activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished catalytic activity","termid":"FYPO:0000664"},{"relation_name":"is_a","term_name":"abnormal phosphatase activity","termid":"FYPO:0004302"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000654","FYPO:0000652","FYPO:0001985","FYPO:0000661"],"is_obsolete":false,"name":"abolished phosphatase activity","synonyms":[{"name":"phosphatase activity abolished","type":"exact"}],"termid":"FYPO:0004303"}


id: FYPO:0003548
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle phenotype in which the G1/S transition of the mitotic cell cycle does not occur after the cell has been arrested in G1 phase due to nitrogen starvation. The cell remains arrested in G1.","definition_xrefs":["PomBase:mah","PMID:9366254"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic G1/S phase transition","termid":"FYPO:0000394"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000631","FYPO:0000002"],"is_obsolete":false,"name":"abolished mitotic G1/S phase transition following nitrogen starvation-induced G1 phase arrest","synonyms":[{"name":"abolished cell cycle progression through mitotic G1/S phase transition following cell cycle arrest in mitotic G1 phase in response to nitrogen starvation","type":"exact"},{"name":"abolished mitotic G1 phase progression following nitrogen starvation-induced G1 phase arrest","type":"related"},{"name":"abolished mitotic G1/S transition following nitrogen starvation-induced G1 phase arrest","type":"exact"},{"name":"mitotic G1/S phase transition abolished after recovery from nitrogen starvation-induced G1 arrest","type":"exact"},{"name":"mitotic cell cycle G1/S phase transition abolished following nitrogen starvation-induced G1 phase arrest","type":"exact"}],"termid":"FYPO:0003548"}


id: PBO:0108574
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"armadillo Sfi1 Interactor","termid":"PBO:0108574"}


id: PBO:0043935
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cartilage associated protein","termid":"PBO:0043935"}


id: PBO:0042302
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD9 molecule","termid":"PBO:0042302"}


id: MONDO:1011590
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Portosystemic shunt that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"portosystemic shunt, non-human animal","termid":"MONDO:1011409"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"portosystemic shunt, dog","secondary_identifiers":["OMIA:000817-9615"],"termid":"MONDO:1011590","xrefs":{"Monarch":{"xref_id":"1011590"}}}


id: FYPO:0007353
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which homologous chromosome pairing during meiosis (synapsis) is normal (i.e. indistinguishable from wild type) at a cis-acting homologous chromosome pairing region on chromosome 2.","definition_xrefs":["PomBase:mah","PomBase:vw","PMID:31811152"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal homologous chromosome pairing at cis-acting homologous chromosome pairing region","termid":"FYPO:0003051"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal homologous chromosome pairing at cis-acting homologous chromosome pairing region on chromosome 2","synonyms":[{"name":"normal homologous chromosome pairing at meiosis at cis-acting homologous chromosome pairing region on chromosome 2","type":"exact"},{"name":"normal homologous chromosome pairing at sme2 locus","type":"narrow"},{"name":"normal synapsis at cis-acting homologous chromosome pairing region on chromosome 2","type":"exact"}],"termid":"FYPO:0007353"}


id: MONDO:0000464
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Stargardt disease (obsolete MONDO:0000464)","termid":"MONDO:0000464","xrefs":{"Monarch":{"xref_id":"0000464"}}}


id: GO:0099530
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A G protein-coupled receptor activity occurring in the postsynaptic membrane that is part of a GPCR signaling pathway that positively regulates ion channel activity in the postsynaptic membrane.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor activity","termid":"GO:0004930"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"G protein-coupled receptor activity involved in regulation of postsynaptic membrane potential","synonyms":[{"name":"G-protein coupled receptor activity involved in regulation of postsynaptic membrane potential","type":"exact"}],"termid":"GO:0099530"}


id: PBO:0001210
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTP cyclohydrolase II (predicted)","termid":"PBO:0001210"}


id: PBO:0035897
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_acetylation_during_vegetative_growth","termid":"PBO:0035897"}


id: GO:1901870
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving ecgonone methyl ester.","definition_xrefs":["GOC:TermGenie","PMID:22665766"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ketone metabolic process","termid":"GO:0042180"},{"relation_name":"is_a","term_name":"tropane alkaloid metabolic process","termid":"GO:0046448"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ecgonone methyl ester metabolic process","synonyms":[{"name":"ecgonone methyl ester metabolism","type":"exact"}],"termid":"GO:1901870"}


id: GO:1905952
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of lipid localization.","definition_xrefs":["PMID:17564681","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of localization","termid":"GO:0032879"},{"relation_name":"regulates","term_name":"lipid localization","termid":"GO:0010876"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of lipid localization","synonyms":[{"name":"regulation of lipid localisation","type":"exact"}],"termid":"GO:1905952"}


id: PBO:0045561
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dual specificity phosphatase 10","termid":"PBO:0045561"}


id: PBO:0083783
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential protein involved in maturation of 18S rRNA; depletion leads to inhibited pre-rRNA processing and reduced polysome levels; localizes primarily to the nucleolus","termid":"PBO:0083783"}


id: GO:0050013
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-dehydropantoate = 3-methyl-2-oxobutanoate + formaldehyde.","definition_xrefs":["EC:4.1.2.12","MetaCyc:KETOPANTOALDOLASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde-lyase activity","termid":"GO:0016832"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"2-dehydropantoate aldolase activity","secondary_identifiers":["RHEA:23276"],"synonyms":[{"name":"2-dehydropantoate formaldehyde-lyase (3-methyl-2-oxobutanoate-forming)","type":"related"},{"name":"2-dehydropantoate formaldehyde-lyase activity","type":"related"},{"name":"ketopantoaldolase activity","type":"exact"}],"termid":"GO:0050013"}


id: MONDO:0011335
data:
  {"annotated_genes":["SJAG_00851"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86047],"is_not":false,"summary":null,"term":"MONDO:0011335"}]},"cv_name":"mondo","definition":"A rare disorder caused by mutation in the KIF22 gene. It is characterized by short stature, midface retrusion, progressive knee malalignment, generalized ligamentous laxity, and mild spinal deformity.","definition_xrefs":["NCIT:C125419"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"spondyloepimetaphyseal dysplasia with joint laxity","termid":"MONDO:0019675"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00851":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0005497","MONDO:0000426"],"is_obsolete":false,"name":"spondyloepimetaphyseal dysplasia with multiple dislocations","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:766820007","GARD:9866","OMIM:603546","MESH:C535784","DOID:0112199","Orphanet:93360","UMLS:C1863732","MEDGEN:350960"],"synonyms":[{"name":"SEMD-MD","type":"exact"},{"name":"SEMDJL2","type":"exact"},{"name":"spondyloepimetaphyseal dysplasia with JOINT laxity type 2","type":"related"},{"name":"spondyloepimetaphyseal dysplasia with JOINT laxity, type 2","type":"related"},{"name":"spondyloepimetaphyseal dysplasia with Joint laxity, Hall type","type":"related"},{"name":"spondyloepimetaphyseal dysplasia with Joint laxity, leptodactylic type","type":"related"},{"name":"spondyloepimetaphyseal dysplasia with Joint laxity, type 2","type":"related"},{"name":"spondyloepimetaphyseal dysplasia with joint laxicity, Hall type","type":"exact"},{"name":"spondyloepimetaphyseal dysplasia with joint laxity type 2","type":"exact"},{"name":"spondyloepimetaphyseal dysplasia with joint laxity, leptodactylic type","type":"exact"},{"name":"spondyloepimetaphyseal dysplasia with multiple dislocations Hall type","type":"related"},{"name":"spondyloepimetaphyseal dysplasia with multiple dislocations leptodactylic type","type":"related"},{"name":"spondyloepimetaphyseal dysplasia with multiple dislocations, Hall type","type":"exact"}],"termid":"MONDO:0011335","terms_by_termid":{"MONDO:0011335":null},"xrefs":{"Monarch":{"xref_id":"0011335"}}}


id: FYPO:0005159
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the synthesis of DNA that occurs as part of DNA replication is decreased.","definition_xrefs":["PomBase:mah","PMID:22970243"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic DNA replication","termid":"FYPO:0001343"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0000293","FYPO:0000631"],"is_obsolete":false,"name":"decreased DNA synthesis involved in mitotic DNA replication","synonyms":[{"name":"decreased DNA biosynthetic process involved in mitotic DNA replication","type":"exact"},{"name":"decreased DNA synthesis involved in DNA replication during mitotic cell cycle","type":"exact"},{"name":"decreased DNA synthesis involved in mitotic DNA replication during vegetative growth","type":"exact"},{"name":"reduced DNA synthesis involved in mitotic DNA replication","type":"exact"}],"termid":"FYPO:0005159"}


id: GO:1903378
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of oxidative stress-induced neuron intrinsic apoptotic signaling pathway.","definition_xrefs":["GOC:bf","GO_REF:0000058","GOC:PARL","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of neuron apoptotic process","termid":"GO:0043525"},{"relation_name":"is_a","term_name":"positive regulation of oxidative stress-induced intrinsic apoptotic signaling pathway","termid":"GO:1902177"},{"relation_name":"is_a","term_name":"regulation of oxidative stress-induced neuron intrinsic apoptotic signaling pathway","termid":"GO:1903376"},{"relation_name":"positively_regulates","term_name":"neuron intrinsic apoptotic signaling pathway in response to oxidative stress","termid":"GO:0036480"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of oxidative stress-induced neuron intrinsic apoptotic signaling pathway","synonyms":[{"name":"activation of neuron apoptosis in response to oxidative stress","type":"related"},{"name":"activation of neuron intrinsic apoptotic signaling pathway in response to oxidative stress","type":"narrow"},{"name":"positive regulation of neuron apoptosis in response to oxidative stress","type":"related"},{"name":"positive regulation of neuron intrinsic apoptotic signaling pathway in response to oxidative stress","type":"exact"},{"name":"up regulation of neuron apoptosis in response to oxidative stress","type":"related"},{"name":"up regulation of neuron intrinsic apoptotic signaling pathway in response to oxidative stress","type":"exact"},{"name":"up-regulation of neuron apoptosis in response to oxidative stress","type":"related"},{"name":"up-regulation of neuron intrinsic apoptotic signaling pathway in response to oxidative stress","type":"exact"},{"name":"upregulation of neuron apoptosis in response to oxidative stress","type":"related"},{"name":"upregulation of neuron intrinsic apoptotic signaling pathway in response to oxidative stress","type":"exact"}],"termid":"GO:1903378"}


id: GO:0009629
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a gravitational stimulus.","definition_xrefs":["GOC:hb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to abiotic stimulus","termid":"GO:0009628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to gravity","synonyms":[{"name":"response to gravitational stimulus","type":"exact"}],"termid":"GO:0009629"}


id: PBO:0111298
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U1 snRNP-associated protein Prp40","termid":"PBO:0111298"}


id: FYPO:0000377
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which the frequency of occurrence of apoptosis is increased. Apoptosis is a form of cell death characterized by rounding-up of the cell, retraction of pseudopodes, reduction of cellular volume (pyknosis), chromatin condensation, nuclear fragmentation (karyorrhexis), plasma membrane blebbing and fragmentation of the cell into apoptotic bodies.","definition_xrefs":["GO:0006915","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population phenotype","termid":"FYPO:0000003"},{"relation_name":"is_a","term_name":"abnormal phenotype","termid":"FYPO:0001985"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000003"],"is_obsolete":false,"name":"increased frequency of apoptosis","synonyms":[{"name":"apoptosis: increased","type":"related"},{"name":"increased apoptosis","type":"exact"},{"name":"increased apoptotic frequency","type":"exact"}],"termid":"FYPO:0000377"}


id: GO:1900680
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of ferricrocin biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of ferricrocin biosynthetic process","termid":"GO:1900678"},{"relation_name":"is_a","term_name":"positive regulation of ferrichrome biosynthetic process","termid":"GO:1905570"},{"relation_name":"positively_regulates","term_name":"ferricrocin biosynthetic process","termid":"GO:0031171"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0019748"},{"rel_name":"regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"positive regulation of ferricrocin biosynthetic process","synonyms":[{"name":"activation of ferricrocin anabolism","type":"exact"},{"name":"activation of ferricrocin biosynthesis","type":"exact"},{"name":"activation of ferricrocin biosynthetic process","type":"narrow"},{"name":"activation of ferricrocin biosynthetic process, peptide formation","type":"narrow"},{"name":"activation of ferricrocin biosynthetic process, peptide modification","type":"narrow"},{"name":"activation of ferricrocin formation","type":"exact"},{"name":"activation of ferricrocin synthesis","type":"exact"},{"name":"positive regulation of ferricrocin anabolism","type":"exact"},{"name":"positive regulation of ferricrocin biosynthesis","type":"exact"},{"name":"positive regulation of ferricrocin biosynthetic process, peptide formation","type":"narrow"},{"name":"positive regulation of ferricrocin biosynthetic process, peptide modification","type":"narrow"},{"name":"positive regulation of ferricrocin formation","type":"exact"},{"name":"positive regulation of ferricrocin synthesis","type":"exact"},{"name":"up regulation of ferricrocin anabolism","type":"exact"},{"name":"up regulation of ferricrocin biosynthesis","type":"exact"},{"name":"up regulation of ferricrocin biosynthetic process","type":"exact"},{"name":"up regulation of ferricrocin biosynthetic process, peptide formation","type":"narrow"},{"name":"up regulation of ferricrocin biosynthetic process, peptide modification","type":"narrow"},{"name":"up regulation of ferricrocin formation","type":"exact"},{"name":"up regulation of ferricrocin synthesis","type":"exact"},{"name":"up-regulation of ferricrocin anabolism","type":"exact"},{"name":"up-regulation of ferricrocin biosynthesis","type":"exact"},{"name":"up-regulation of ferricrocin biosynthetic process","type":"exact"},{"name":"up-regulation of ferricrocin biosynthetic process, peptide formation","type":"narrow"},{"name":"up-regulation of ferricrocin biosynthetic process, peptide modification","type":"narrow"},{"name":"up-regulation of ferricrocin formation","type":"exact"},{"name":"up-regulation of ferricrocin synthesis","type":"exact"},{"name":"upregulation of ferricrocin anabolism","type":"exact"},{"name":"upregulation of ferricrocin biosynthesis","type":"exact"},{"name":"upregulation of ferricrocin biosynthetic process","type":"exact"},{"name":"upregulation of ferricrocin biosynthetic process, peptide formation","type":"narrow"},{"name":"upregulation of ferricrocin biosynthetic process, peptide modification","type":"narrow"},{"name":"upregulation of ferricrocin formation","type":"exact"},{"name":"upregulation of ferricrocin synthesis","type":"exact"}],"termid":"GO:1900680"}


id: PBO:0049570
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2B histone pseudogene 7","termid":"PBO:0049570"}


id: GO:0046886
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of hormones.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of biosynthetic process","termid":"GO:0009891"},{"relation_name":"is_a","term_name":"positive regulation of hormone metabolic process","termid":"GO:0032352"},{"relation_name":"is_a","term_name":"regulation of hormone biosynthetic process","termid":"GO:0046885"},{"relation_name":"positively_regulates","term_name":"hormone biosynthetic process","termid":"GO:0042446"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of hormone biosynthetic process","synonyms":[{"name":"activation of hormone biosynthetic process","type":"narrow"},{"name":"positive regulation of hormone anabolism","type":"exact"},{"name":"positive regulation of hormone biosynthesis","type":"exact"},{"name":"positive regulation of hormone formation","type":"exact"},{"name":"positive regulation of hormone synthesis","type":"exact"},{"name":"stimulation of hormone biosynthetic process","type":"narrow"},{"name":"up regulation of hormone biosynthetic process","type":"exact"},{"name":"up-regulation of hormone biosynthetic process","type":"exact"},{"name":"upregulation of hormone biosynthetic process","type":"exact"}],"termid":"GO:0046886"}


id: PBO:0049946
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HID1 antisense RNA 1","termid":"PBO:0049946"}


id: MONDO:0957958
data:
  {"annotated_genes":["SJAG_05289"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86407],"is_not":false,"summary":null,"term":"MONDO:0957958"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary spastic paraplegia","termid":"MONDO:0019064"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05289":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"spastic paraplegia 72b, autosomal recessive","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C5882720","OMIM:620606","MEDGEN:1844131"],"termid":"MONDO:0957958","terms_by_termid":{"MONDO:0957958":null},"xrefs":{"Monarch":{"xref_id":"0957958"}}}


id: GO:0120143
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of any ecdysone receptor signaling pathway.","definition_xrefs":["GOC:ha","PMID:23072462"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of intracellular steroid hormone receptor signaling pathway","termid":"GO:0033144"},{"relation_name":"is_a","term_name":"regulation of ecdysone receptor signaling pathway","termid":"GO:0120141"},{"relation_name":"is_a","term_name":"negative regulation of cellular response to alcohol","termid":"GO:1905958"},{"relation_name":"negatively_regulates","term_name":"ecdysone receptor signaling pathway","termid":"GO:0035076"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of ecdysone receptor signaling pathway","synonyms":[{"name":"negative regulation of ecdysone receptor-mediated signaling pathway","type":"exact"}],"termid":"GO:0120143"}


id: MONDO:0958009
data:
  {"annotated_genes":["SJAG_00721"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86449],"is_not":false,"summary":null,"term":"MONDO:0958009"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spastic ataxia","termid":"MONDO:0017845"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00721":null},"genotype_count":0,"is_obsolete":false,"name":"spastic ataxia 10, autosomal recessive","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:620666","MEDGEN:1851662","UMLS:C5882738"],"termid":"MONDO:0958009","terms_by_termid":{"MONDO:0958009":null},"xrefs":{"Monarch":{"xref_id":"0958009"}}}


id: PBO:0067756
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 55","termid":"PBO:0067756"}


id: GO:0003913
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the repair of a photoproduct resulting from ultraviolet irradiation of two adjacent pyrimidine residues in DNA.","definition_xrefs":["PMID:11124949","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-carbon lyase activity","termid":"GO:0016830"},{"relation_name":"is_a","term_name":"catalytic activity, acting on DNA","termid":"GO:0140097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0140097","GO:0003674"],"is_obsolete":false,"name":"DNA photolyase activity","termid":"GO:0003913"}


id: GO:0102576
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: H2O + a 3-oxo-palmitoyl-[acp] = 3-oxopalmitic acid + H+ + a holo-[acyl-carrier protein].","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 3-oxo-palmitoyl-ACP hydrolase activity (obsolete GO:0102576)","termid":"GO:0102576"}


id: PBO:0084761
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial methionyl-tRNA synthetase (MetRS); functions as a monomer in mitochondrial protein synthesis; functions similarly to cytoplasmic MetRS although the cytoplasmic form contains a zinc-binding domain not found in Msm1p","termid":"PBO:0084761"}


id: GO:0060507
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals generated as a consequence of an epidermal growth factor-type receptor binding to one of its physiological ligands. This process contributes to lung development.","definition_xrefs":["GOC:mtg_lung","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epidermal growth factor receptor signaling pathway","termid":"GO:0007173"},{"relation_name":"part_of","term_name":"cell-cell signaling involved in lung development","termid":"GO:0060495"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"epidermal growth factor receptor signaling pathway involved in lung development","synonyms":[{"name":"epidermal growth factor receptor signalling pathway involved in lung development","type":"exact"}],"termid":"GO:0060507"}


id: PBO:0003977
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA snR5","termid":"PBO:0003977"}


id: GO:0044009
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The transfer of virions by means of an organism (often an insect or other animal) in order to create new infection.","definition_xrefs":["GOC:cc"],"gene_count":0,"genotype_count":0,"name":"obsolete viral transmission by vector (obsolete GO:0044009)","termid":"GO:0044009"}


id: PBO:0068453
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 29, pseudogene","termid":"PBO:0068453"}


id: MONDO:0004357
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma of the larynx that arises from the supraglottic area.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"supraglottis cancer","termid":"MONDO:0001724"},{"relation_name":"is_a","term_name":"laryngeal carcinoma","termid":"MONDO:0002358"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"carcinoma of supraglottis","secondary_identifiers":["NCIT:C5973","UMLS:C1299240","DOID:7763","MEDGEN:266243","SCTID:372105009"],"synonyms":[{"name":"cancer of supraglottis","type":"exact"},{"name":"cancer of the supraglottis","type":"exact"},{"name":"carcinoma of supraglottic part of larynx","type":"exact"},{"name":"carcinoma of supraglottis","type":"exact"},{"name":"carcinoma of the supraglottis","type":"exact"},{"name":"supraglottic cancer","type":"exact"},{"name":"supraglottic carcinoma","type":"exact"},{"name":"supraglottic part of larynx carcinoma","type":"exact"},{"name":"supraglottic throat cancer","type":"exact"},{"name":"supraglottis carcinoma","type":"exact"}],"termid":"MONDO:0004357","xrefs":{"Monarch":{"xref_id":"0004357"}}}


id: FYPO:0002983
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of serine residues in one or more specific proteins, or of specific protein sites, does not occur during a cellular response to DNA damage.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete abolished protein serine phosphorylation during cellular response to DNA damage (obsolete FYPO:0002983)","synonyms":[{"name":"abolished protein serine phosphorylation during cellular response to DNA damage during mitotic cell cycle","type":"related"},{"name":"abolished protein serine phosphorylation during cellular response to DNA damage during vegetative growth","type":"exact"},{"name":"protein serine phosphorylation abolished during cellular response to DNA damage","type":"exact"}],"termid":"FYPO:0002983"}


id: GO:0047944
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: L-glutamate + ATP = alpha-L-glutamyl phosphate + ADP + H+.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete glutamate 1-kinase activity (obsolete GO:0047944)","synonyms":[{"name":"ATP:L-glutamate 1-phosphotransferase activity","type":"related"}],"termid":"GO:0047944"}


id: MONDO:0004974
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign or malignant neuroendocrine neoplasm of the sympathetic nervous system that secretes catecholamines. It arises from the chromaffin cells of the adrenal medulla. Clinical presentation includes headaches, palpitations, chest and abdominal pain, hypertension, fever, and tremor. Microscopically, a characteristic nesting (zellballen) growth pattern is usually seen. Other growth patterns including trabecular pattern may also be present.","definition_xrefs":["NCIT:C3326"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sympathetic paraganglioma","termid":"MONDO:0021072"},{"relation_name":"is_a","term_name":"adrenal medulla neoplasm","termid":"MONDO:0021237"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adrenal gland pheochromocytoma","secondary_identifiers":["EFO:0000239","MEDGEN:1636437","ICDO:8700/0","NANDO:2200078","UMLS:C4551683","DOID:0050892"],"synonyms":[{"name":"Intraadrenal paraganglioma","type":"exact"},{"name":"PCC","type":"exact"},{"name":"adrenal gland Chromaffinoma","type":"exact"},{"name":"adrenal gland chromaffin paraganglioma","type":"exact"},{"name":"adrenal gland paraganglioma","type":"exact"},{"name":"adrenal gland pheochromocytoma","type":"exact"},{"name":"adrenal medullary paraganglioma","type":"exact"},{"name":"adrenal medullary pheochromocytoma","type":"exact"},{"name":"adrenal pheochromocytoma","type":"exact"},{"name":"chromaffin paraganglioma of the adrenal gland","type":"exact"},{"name":"pheochromocytoma","type":"broad"},{"name":"pheochromocytoma (adrenal)","type":"exact"}],"termid":"MONDO:0004974","xrefs":{"Monarch":{"xref_id":"0004974"}}}


id: PBO:0001590
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LAlv9 family protein, involved in post Golgi transport (predicted)","termid":"PBO:0001590"}


id: SO:0000046
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"To insert a subsection of sequence.","definition_xrefs":["SO:ke"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000046 insert (obsolete SO:0000046)","termid":"SO:0000046"}


id: FYPO:0004993
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which spore germination occurs at a normal (i.e. indistinguishable from wild type) frequency.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population phenotype","termid":"FYPO:0000003"},{"relation_name":"is_a","term_name":"normal phenotype","termid":"FYPO:0000257"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000003"],"is_obsolete":false,"name":"normal spore germination frequency","synonyms":[{"name":"normal spore viability","type":"related"}],"termid":"FYPO:0004993"}


id: MOD:00633
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative","definition_xrefs":["Unimod:323"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"},{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"bis-N-I-sulfonerahodamine","synonyms":[{"name":"Xlink:B10621","type":"related"},{"name":"bis-((N-iodoacetyl)piperazinyl)sulfonerhodamine","type":"exact"},{"name":"bis-N-I-sulfonerahodamine","type":"related"}],"termid":"MOD:00633"}


id: MONDO:0006054
data:
  {"annotated_genes":["SJAG_03429","SJAG_02748","SJAG_01419","SJAG_01156","SJAG_00997","SJAG_04885"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87097],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009050"},{"annotations":[87628,85414],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011962"},{"annotations":[87489],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032747"},{"annotations":[87679,87680],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013872"}]},"cv_name":"mondo","definition":"A benign or malignant, primary or metastatic neoplasm affecting the male and female reproductive system.","definition_xrefs":["NCIT:C3674"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reproductive system disorder","termid":"MONDO:0005039"},{"relation_name":"is_a","term_name":"neoplasm","termid":"MONDO:0005070"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00997":null,"SJAG_01156":null,"SJAG_01419":null,"SJAG_02748":null,"SJAG_03429":null,"SJAG_04885":null},"genotype_count":0,"is_obsolete":false,"name":"reproductive system neoplasm","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C0178830","MEDGEN:64246","EFO:1000051"],"synonyms":[{"name":"neoplasm of reproductive system","type":"exact"},{"name":"neoplasm of the reproductive system","type":"exact"},{"name":"reproductive neoplasm","type":"exact"},{"name":"reproductive system neoplasm","type":"exact"},{"name":"reproductive system neoplasm (disease)","type":"exact"},{"name":"reproductive system tumor","type":"exact"},{"name":"reproductive system tumour","type":"exact"},{"name":"reproductive tumor","type":"exact"},{"name":"reproductive tumour","type":"exact"},{"name":"tumor of reproductive system","type":"exact"},{"name":"tumor of the reproductive system","type":"exact"},{"name":"tumour of reproductive system","type":"exact"},{"name":"tumour of the reproductive system","type":"exact"}],"termid":"MONDO:0006054","terms_by_termid":{"MONDO:0009050":null,"MONDO:0011962":null,"MONDO:0013872":null,"MONDO:0032747":null},"xrefs":{"Monarch":{"xref_id":"0006054"}}}


id: GO:0003404
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process pertaining to the formation and shaping of the optic vesicle. This process begins with the specific processes that contribute to the appearance of the vesicle and ends when the vesicle has evaginated. The optic vesicle is the evagination of neurectoderm that precedes formation of the optic cup.","definition_xrefs":["GOC:ascb_2009","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic morphogenesis","termid":"GO:0048598"},{"relation_name":"is_a","term_name":"tissue morphogenesis","termid":"GO:0048729"},{"relation_name":"part_of","term_name":"embryonic camera-type eye morphogenesis","termid":"GO:0048596"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"optic vesicle morphogenesis","termid":"GO:0003404"}


id: PBO:0109400
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed transcript, Y-linked 27, pseudogene","termid":"PBO:0109400"}


id: PBO:0077060
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thrombospondin type 1 domain containing 7A","termid":"PBO:0077060"}


id: PBO:0051644
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"impact RWD domain protein","termid":"PBO:0051644"}


id: GO:0072719
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cisplatin stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to chemical stimulus","termid":"GO:0070887"},{"relation_name":"is_a","term_name":"response to cisplatin","termid":"GO:0072718"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to cisplatin","termid":"GO:0072719"}


id: MONDO:0019460
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An acute leukemia in which the blasts lack sufficient evidence to classify as myeloid or lymphoid or they have morphologic and/or immunophenotypic characteristics of both myeloid and lymphoid cells. (WHO, 2001)","definition_xrefs":["NCIT:C7464"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute myeloid leukemia","termid":"MONDO:0018874"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0004992","MONDO:0005046"],"is_obsolete":false,"name":"acute leukemia of ambiguous lineage","secondary_identifiers":["NANDO:2200017","UMLS:C1301357","NANDO:2200018","Orphanet:86851","SCTID:721308005","GARD:8638","icd11.foundation:1062906118","MedDRA:10067399","MEDGEN:226983"],"synonyms":[{"name":"ALL with myeloid markers","type":"related"},{"name":"AML with lymphoid markers","type":"related"},{"name":"BAL","type":"related"},{"name":"acute leukaemia of indeterminate lineage","type":"exact"},{"name":"acute leukaemia of undetermined lineage","type":"related"},{"name":"acute leukemia of ambiguous lineage","type":"exact"},{"name":"acute leukemia of indeterminate lineage","type":"exact"},{"name":"acute leukemia of undetermined lineage","type":"related"},{"name":"biphenotypic acute leukaemia","type":"related"},{"name":"biphenotypic acute leukemia","type":"related"},{"name":"hybrid acute leukaemia","type":"exact"},{"name":"hybrid acute leukemia","type":"exact"},{"name":"mixed lineage acute leukaemia","type":"exact"},{"name":"mixed lineage acute leukemia","type":"exact"},{"name":"mixed phenotype acute leukaemia","type":"related"},{"name":"mixed phenotype acute leukemia","type":"related"}],"termid":"MONDO:0019460","xrefs":{"Monarch":{"xref_id":"0019460"}}}


id: PBO:0080465
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vesicle trafficking 1 pseudogene 1","termid":"PBO:0080465"}


id: PBO:0087836
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Thioredoxin peroxidase; acts as both ribosome-associated and free cytoplasmic antioxidant; self-associates to form a HMW chaperone complex under oxidative stress; chaperone activity essential for growth in zinc deficiency; hydrogen peroxide receptor and signal transducer in a light sensing pathway; required for telomere length maintenance; binds and modulates Cdc19p activity; protein abundance increases and forms cytoplasmic foci during DNA replication stress","termid":"PBO:0087836"}


id: PBO:0000007
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene characterisation status","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transposon","termid":"PBO:0000007"}


id: GO:1903251
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires the specialized features of a multi-ciliated epithelial cell.","definition_xrefs":["PMID:24934224","GOC:sp","GO_REF:0000086","GOC:TermGenie","PMID:22231168"],"direct_ancestors":[{"relation_name":"is_a","term_name":"columnar/cuboidal epithelial cell differentiation","termid":"GO:0002065"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"multi-ciliated epithelial cell differentiation","synonyms":[{"name":"multiciliate cell differentiation","type":"broad"}],"termid":"GO:1903251"}


id: PBO:0058130
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4432","termid":"PBO:0058130"}


id: PBO:0002988
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.2.1.5","termid":"PBO:0002988"}


id: MONDO:0012006
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"craniosynostosis","termid":"MONDO:0015469"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"craniosynostosis with ocular abnormalities and hallucal defects","secondary_identifiers":["UMLS:C1842316","MESH:C564263","OMIM:608279","MEDGEN:331266"],"synonyms":[{"name":"craniosynostosis with ocular abnormalities and hallucal defects","type":"exact"}],"termid":"MONDO:0012006","xrefs":{"Monarch":{"xref_id":"0012006"}}}


id: PBO:0080328
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 92 pseudogene","termid":"PBO:0080328"}


id: PBO:0060639
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear receptor coactivator 2","termid":"PBO:0060639"}


id: MONDO:0000514
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A squamous cell carcinoma that involves the bone tissue.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bone carcinoma","termid":"MONDO:0002415"},{"relation_name":"is_a","term_name":"squamous cell carcinoma","termid":"MONDO:0005096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"bone squamous cell carcinoma","secondary_identifiers":["DOID:0050896"],"synonyms":[{"name":"bone tissue squamous cell carcinoma","type":"exact"}],"termid":"MONDO:0000514","xrefs":{"Monarch":{"xref_id":"0000514"}}}


id: PBO:0014580
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"electron transfer flavoprotein beta subunit EtfB (predicted)","termid":"PBO:0014580"}


id: GO:0011000
data:
  {"annotated_genes":["SJAG_04671","SJAG_03097","SJAG_03997","SJAG_02724"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[99721,103593,107007,108894],"is_not":false,"summary":null,"term":"GO:0011000"}]},"cv_name":"biological_process","definition":"A process that impedes the progress of the DNA replication fork at natural replication fork pausing sites within the mating type locus.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"replication fork arrest","termid":"GO:0043111"}],"gene_count":4,"genes_by_uniquename":{"SJAG_02724":null,"SJAG_03097":null,"SJAG_03997":null,"SJAG_04671":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006260"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0006260"},{"rel_name":"negatively_regulates","termid":"GO:0006259"},{"rel_name":"negatively_regulates","termid":"GO:0006260"}],"interesting_parent_ids":["GO:0006260","GO:0006259","GO:0008150"],"is_obsolete":false,"name":"replication fork arrest at mating type locus","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0011000","terms_by_termid":{"GO:0011000":null}}


id: PBO:0040470
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATR serine/threonine kinase","termid":"PBO:0040470"}


id: PR:Q9UUH3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug58 gene.","definition_xrefs":["UniProtKB:Q9UUH3","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized kinase mug58 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC630.09c","synonyms":[{"name":"Spom972h-mug58","type":"exact"},{"name":"meiotically up-regulated gene 58 protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UUH3"}


id: PR:Q9US28
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC1783.01 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9US28"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized FAD-binding protein C1783.01 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1783.01","synonyms":[{"name":"Spom972h-SPAC1783.01","type":"exact"}],"termid":"PR:Q9US28"}


id: GO:1990977
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of firing from a late origin of replication involved in mitotic DNA replication.","definition_xrefs":["PMID:26436827"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of mitotic DNA replication initiation from late origin (obsolete GO:1990977)","termid":"GO:1990977"}


id: FYPO:0005401
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of protein measured in a cell is higher than normal during arrest of the mitotic cell cycle in G1 phase due to nitrogen starvation. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein level during cellular response to nitrogen starvation","termid":"FYPO:0001219"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0006551"],"is_obsolete":false,"name":"increased protein level during mitotic G1 cell cycle arrest in response to nitrogen starvation","synonyms":[{"name":"increased protein accumulation during mitotic G1 cell cycle arrest in response to nitrogen starvation","type":"related"},{"name":"increased protein level during G1 arrest in response to nitrogen starvation","type":"exact"}],"termid":"FYPO:0005401"}


id: PBO:0075809
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"single stranded DNA binding protein 2","termid":"PBO:0075809"}


id: PBO:0079724
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"upstream binding transcription factor","termid":"PBO:0079724"}


id: SO:0001319
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Galactosyl_queuosine is a modified 7-deazoguanosine.","direct_ancestors":[{"relation_name":"is_a","term_name":"seven_deazaguanosine","termid":"SO:0001316"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"galactosyl_queuosine","secondary_identifiers":["RNAMOD:045"],"synonyms":[{"name":"galQ","type":"exact"},{"name":"galactosyl queuosine","type":"exact"},{"name":"galactosyl-queuosine","type":"exact"}],"termid":"SO:0001319"}


id: PBO:0078957
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ser (anticodon AGA) 1-1","termid":"PBO:0078957"}


id: GO:0043822
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the endonucleolytic cleavage of RNA, removing 21 and 42 nucleotides, respectively, from the 5'- and 3'-termini of a 5S-rRNA precursor.","definition_xrefs":["PMID:402365"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA endonuclease activity producing 5'-phosphomonoesters, hydrolytic mechanism","termid":"GO:0016891"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016788","GO:0140098","GO:0016787","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"ribonuclease M5 activity","secondary_identifiers":["EC:3.1.26.8","MetaCyc:3.1.26.8-RXN"],"synonyms":[{"name":"5S ribosomal RNA maturation endonuclease activity","type":"exact"},{"name":"5S ribosomal maturation nuclease activity","type":"related"},{"name":"RNase M5 activity","type":"related"}],"termid":"GO:0043822"}


id: PBO:0083370
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; overlaps verified ORF ALG3","termid":"PBO:0083370"}


id: PBO:0044916
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diacylglycerol O-acyltransferase 2 like 7, pseudogene","termid":"PBO:0044916"}


id: MONDO:0002985
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete pustulosis of palm and sole (obsolete MONDO:0002985)","termid":"MONDO:0002985","xrefs":{"Monarch":{"xref_id":"0002985"}}}


id: PBO:0062884
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ovochymase 1","termid":"PBO:0062884"}


id: PBO:0028907
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_transcription_during_cellular_response_to_calcium_ion","termid":"PBO:0028907"}


id: GO:0018210
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of peptidyl-threonine.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-amino acid modification","termid":"GO:0018193"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-threonine modification","termid":"GO:0018210"}


id: PBO:0064962
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRAME family member 14","termid":"PBO:0064962"}


id: PBO:0084557
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Membrane anchor subunit of succinate dehydrogenase (SDH); involved in coupling the oxidation of succinate to the transfer of electrons to ubiquinone as part of the TCA cycle and the mitochondrial respiratory chain; has similarity to human SDH subunit D (SDHD), which is implicated in paraganglioma","termid":"PBO:0084557"}


id: MONDO:0011111
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete horns in sheep (obsolete MONDO:0011111)","secondary_identifiers":["OMIM:601563"],"synonyms":[{"name":"Ho","type":"related"},{"name":"horns in sheep","type":"exact"}],"termid":"MONDO:0011111","xrefs":{"Monarch":{"xref_id":"0011111"}}}


id: PBO:0017837
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"predicted GTPAse with a role in RNA polymerase localization (predicted)","termid":"PBO:0017837"}


id: PBO:0057237
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 424","termid":"PBO:0057237"}


id: _global:contained_by
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"X contained_by Y iff X starts after start of Y and X ends before end of Y.","definition_xrefs":["PMID:20226267"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"contained_by","termid":"_global:contained_by"}


id: GO:0120517
data:
  {"annotated_genes":["SJAG_01148"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[75167],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035299"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: inositol pentakisphosphate + ATP = inositol hexakisphosphate + ADP + H+.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"},{"relation_name":"is_a","term_name":"inositol phosphate kinase activity","termid":"GO:0180030"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01148":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"}],"interesting_parent_ids":["GO:0003674","GO:0016301","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"inositol pentakisphosphate kinase activity","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0120517","terms_by_termid":{"GO:0035299":null}}


id: PBO:0003143
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.3.1.1","termid":"PBO:0003143"}


id: MONDO:0001323
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Transient bilateral swelling of breast tissue in a neonate that results from the waning influence of maternal estrogen.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gynecomastia disorder","termid":"MONDO:0001571"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"infant gynecomastia","secondary_identifiers":["ICD10CM:P83.4","ICD9:778.7","SCTID:34831003","UMLS:C1449721","MEDGEN:258541","DOID:11603"],"synonyms":[{"name":"breast engorgement in newborn","type":"exact"},{"name":"neonatal gynaecomastia","type":"exact"}],"termid":"MONDO:0001323","xrefs":{"Monarch":{"xref_id":"0001323"}}}


id: PR:Q8WZK4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC839.03c gene.","definition_xrefs":["UniProtKB:Q8WZK4","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defective in cullin neddylation protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC839.03c","synonyms":[{"name":"Spom972h-SPBC839.03c","type":"exact"}],"termid":"PR:Q8WZK4"}


id: PBO:0043797
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoplasmic polyadenylated homeobox like 2","termid":"PBO:0043797"}


id: PBO:0073400
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SET pseudogene 3","termid":"PBO:0073400"}


id: MOD:00377
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-histidine residue and 5'-phosphouridine through a phosphoramide ester bond to form 1'-(phospho-5'-uridine)-L-histidine.","definition_xrefs":["PubMed:11467524","PubMed:321007","PubMed:8794735","Unimod:417#H","PubMed:380639","RESID:AA0372"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-histidine residue","termid":"MOD:00909"},{"relation_name":"is_a","term_name":"uridylated residue","termid":"MOD:01166"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1'-(phospho-5'-uridine)-L-histidine","synonyms":[{"name":"(S)-2-amino-3-[1-(5'-uridine phosphono)imidazol-4-yl]propanoic acid","type":"exact"},{"name":"1'-(phospho-5'-uridine)-L-histidine","type":"exact"},{"name":"ACT_SITE Tele-UMP-histidine intermediate","type":"exact"},{"name":"L-histidine 5'-uridine phosphoramidester","type":"exact"},{"name":"L-histidine monoanhydride with 5'-uridylic acid","type":"exact"},{"name":"MOD_RES O-UMP-histidine","type":"exact"},{"name":"N(tau)-5'-uridylic-L-histidine","type":"exact"},{"name":"N1'-uridylylated histidine","type":"exact"},{"name":"PhosphoUridine","type":"related"},{"name":"tele-5'-uridylic-L-histidine","type":"exact"},{"name":"uridine phosphodiester","type":"related"}],"termid":"MOD:00377"}


id: MONDO:0029014
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare systemic or rheumatological disease of childhood (obsolete MONDO:0029014)","secondary_identifiers":["Orphanet:280342"],"termid":"MONDO:0029014","xrefs":{"Monarch":{"xref_id":"0029014"}}}


id: PBO:0054143
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1509","termid":"PBO:0054143"}


id: MONDO:0001483
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Crimean-Congo hemorrhagic fever (obsolete MONDO:0001483)","termid":"MONDO:0001483","xrefs":{"Monarch":{"xref_id":"0001483"}}}


id: PBO:0052985
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L antigen family member 3 pseudogene 1","termid":"PBO:0052985"}


id: FYECO:0000095
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Recovery from nitrogen starvation: cells are first grown in minimal medium containing no nitrogen for 24-48h. This medium is then replaced with rich medium containing nitrogen and cells allowed to grow for 4-7 days.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nitrogen starvation and recovery","termid":"FYECO:0000110"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"24-48h nitrogen starvation followed by 4-7 day recovery in rich medium","termid":"FYECO:0000095"}


id: FYPO:0005689
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a cell is inviable and has two nuclei but no septum, and the mitotic cell cycle is arrested before cell separation takes place.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"mitotic cell cycle arrest before cell separation","termid":"FYPO:0002888"},{"relation_name":"is_a","term_name":"mitotic cell cycle arrest before cell separation","termid":"FYPO:0002888"},{"relation_name":"is_a","term_name":"inviable multinucleate aseptate vegetative cell","termid":"FYPO:0004106"},{"relation_name":"is_a","term_name":"binucleate aseptate vegetative cell","termid":"FYPO:0004562"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"has_part","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0000631","FYPO:0000032","FYPO:0005447","FYPO:0000004","FYPO:0001320"],"is_obsolete":false,"name":"inviable binucleate aseptate cell with mitotic cell cycle arrest before cell separation","synonyms":[{"name":"inviable binucleate aseptate cell with mitotic cell cycle arrest before cell separation during vegetative growth","type":"exact"},{"name":"inviable binucleate aseptate cell with mitotic cell cycle arrest before cytokinetic cell separation","type":"exact"},{"name":"inviable binucleate cell with mitotic cell cycle arrest before septation","type":"related"},{"name":"inviable cell with nuclear division arrest without septation (normal cell length)","type":"exact"},{"name":"lethal; binucleate aseptate cell with mitotic cell cycle arrest before cell separation","type":"exact"},{"name":"mitotic cell cycle arrest before cell separation with inviable binucleate aseptate cell","type":"exact"}],"termid":"FYPO:0005689"}


id: MONDO:0000880
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete lupus nephritis (obsolete MONDO:0000880)","termid":"MONDO:0000880","xrefs":{"Monarch":{"xref_id":"0000880"}}}


id: PBO:0078069
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha joining 59 (non-functional)","termid":"PBO:0078069"}


id: PBO:0074751
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 110","termid":"PBO:0074751"}


id: PBO:0001932
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis protein Nob1 (predicted)","termid":"PBO:0001932"}


id: PBO:0038839
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADAM metallopeptidase with thrombospondin type 1 motif 9","termid":"PBO:0038839"}


id: GO:0086088
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a potassium ion by a voltage-gated channel through the plasma membrane of a Purkinje myocyte contributing to the repolarization phase of an action potential. A voltage-gated channel is a channel whose open state is dependent on the voltage across the membrane in which it is embedded.","definition_xrefs":["GOC:BHF","GOC:mtg_cardiac_conduct_nov11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"voltage-gated potassium channel activity involved in cardiac muscle cell action potential repolarization","termid":"GO:0086008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"voltage-gated potassium channel activity involved in Purkinje myocyte action potential repolarization","termid":"GO:0086088"}


id: GO:0090060
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of metaxylem development. Metaxylem development is the process whose specific outcome is the progression of the metaxylem over time, from its formation to the mature structure. The metaxylem is the part of the primary xylem that differentiates after the protoxylem and before the secondary xylem, if any of the latter is formed.","definition_xrefs":["GOC:dph","GOC:sdb_2009","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of multicellular organismal development","termid":"GO:2000026"},{"relation_name":"regulates","term_name":"metaxylem development","termid":"GO:0090058"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of metaxylem development","termid":"GO:0090060"}


id: GO:0036164
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The attachment of a cell to an underlying abiotic (non-living) substrate via adhesion molecules.","definition_xrefs":["GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-substrate adhesion","termid":"GO:0031589"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"cell-abiotic substrate adhesion","synonyms":[{"name":"cell-abiotic surface adhesion","type":"related"}],"termid":"GO:0036164"}


id: PBO:0014303
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMR domain protein, possibly involved in DNA repair and neddylation","termid":"PBO:0014303"}


id: PBO:0056003
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 2","termid":"PBO:0056003"}


id: GO:2000078
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of pancreatic B cell development.","definition_xrefs":["GOC:obol","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell development","termid":"GO:0010720"},{"relation_name":"is_a","term_name":"positive regulation of epithelial cell differentiation","termid":"GO:0030858"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of type B pancreatic cell development","termid":"GO:2000074"},{"relation_name":"positively_regulates","term_name":"type B pancreatic cell development","termid":"GO:0003323"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of type B pancreatic cell development","synonyms":[{"name":"positive regulation of pancreatic B cell development","type":"exact"},{"name":"positive regulation of pancreatic beta cell development","type":"exact"}],"termid":"GO:2000078"}


id: GO:1905356
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of snRNA pseudouridine synthesis.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:27268497"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of RNA metabolic process","termid":"GO:0051252"},{"relation_name":"regulates","term_name":"snRNA pseudouridine synthesis","termid":"GO:0031120"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0016073"}],"interesting_parent_ids":["GO:0016073","GO:0008150"],"is_obsolete":false,"name":"regulation of snRNA pseudouridine synthesis","termid":"GO:1905356"}


id: GO:0030134
data:
  {"annotated_genes":["SJAG_01939","SJAG_03153","SJAG_01642","SJAG_04402","SJAG_04598","SJAG_03907","SJAG_05344","SJAG_02839","SJAG_00906","SJAG_04112","SJAG_04740","SJAG_00284","SJAG_00767","SJAG_00557","SJAG_01633","SJAG_00072","SJAG_00357","SJAG_05345","SJAG_03933","SJAG_02539","SJAG_02349","SJAG_03270","SJAG_01991","SJAG_04513","SJAG_03558","SJAG_04023","SJAG_04196","SJAG_04002","SJAG_02120","SJAG_02264","SJAG_05013","SJAG_04592","SJAG_00785"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[70444,71354,72713,74833,75061,75923,76176,77291,77359,79084,79617,91890,93506,95974,103632,111122,116897,119184],"is_not":false,"summary":null,"term":"GO:0030134"},{"annotations":[75416,71768,78796,73425,76867,75185,77455,71738,95873,76044],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030127"},{"annotations":[70840,76534,67670,101438,74267],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0012507"}]},"cv_name":"cellular_component","definition":"A vesicle with a coat formed of the COPII coat complex proteins. The COPII coat complex is formed by the Sec23p/Sec24p and the Sec13p/Sec31p heterodimers. COPII-associated vesicles transport proteins from the rough endoplasmic reticulum to the Golgi apparatus (anterograde transport).","definition_xrefs":["PMID:8004676","PMID:17499046","Wikipedia:COPII","PMID:22160157","PMID:11252894"],"direct_ancestors":[{"relation_name":"is_a","term_name":"coated vesicle","termid":"GO:0030135"}],"gene_count":33,"genes_by_uniquename":{"SJAG_00072":null,"SJAG_00284":null,"SJAG_00357":null,"SJAG_00557":null,"SJAG_00767":null,"SJAG_00785":null,"SJAG_00906":null,"SJAG_01633":null,"SJAG_01642":null,"SJAG_01939":null,"SJAG_01991":null,"SJAG_02120":null,"SJAG_02264":null,"SJAG_02349":null,"SJAG_02539":null,"SJAG_02839":null,"SJAG_03153":null,"SJAG_03270":null,"SJAG_03558":null,"SJAG_03907":null,"SJAG_03933":null,"SJAG_04002":null,"SJAG_04023":null,"SJAG_04112":null,"SJAG_04196":null,"SJAG_04402":null,"SJAG_04513":null,"SJAG_04592":null,"SJAG_04598":null,"SJAG_04740":null,"SJAG_05013":null,"SJAG_05344":null,"SJAG_05345":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0031410","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"COPII-coated ER to Golgi transport vesicle","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0030138","GO:0140045"],"synonyms":[{"name":"COPII vesicle","type":"related"},{"name":"COPII-associated ER to Golgi transport vesicle","type":"exact"},{"name":"COPII-associated vesicle","type":"exact"},{"name":"COPII-coated vesicle","type":"exact"},{"name":"ER to Golgi constitutive secretory pathway transport vesicle","type":"related"},{"name":"ER to Golgi transport vesicle","type":"related"},{"name":"ER-Golgi transport vesicle","type":"related"},{"name":"endoplasmic reticulum to Golgi transport vesicle","type":"related"},{"name":"endoplasmic reticulum-Golgi transport vesicle","type":"related"}],"termid":"GO:0030134","terms_by_termid":{"GO:0012507":null,"GO:0030127":null,"GO:0030134":null}}


id: PBO:0046405
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EPC1 antisense RNA 1","termid":"PBO:0046405"}


id: PBO:0081188
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Zic family member 1","termid":"PBO:0081188"}


id: PBO:0059620
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ATP8 pseudogene 1","termid":"PBO:0059620"}


id: PBO:0047245
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 237 member A","termid":"PBO:0047245"}


id: GO:0006431
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of coupling methionine to methionyl-tRNA, catalyzed by methionyl-tRNA synthetase. The methionyl-tRNA synthetase is a class-I synthetase. The activated amino acid is transferred to the 2'-OH group of a methionine-accetping tRNA. The 2'-O-aminoacyl-tRNA will ultimately migrate to the 3' position via transesterification.","definition_xrefs":["GOC:mcc","ISBN:0716730510"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA aminoacylation for protein translation","termid":"GO:0006418"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0006520","GO:0008150","GO:0006399"],"is_obsolete":false,"name":"methionyl-tRNA aminoacylation","termid":"GO:0006431"}


id: MONDO:0014438
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Bardet-Biedl syndrome in which the cause of the disease is a mutation in the BBS10 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Bardet-Biedl syndrome","termid":"MONDO:0015229"},{"relation_name":"is_a","term_name":"BBS10-related ciliopathy","termid":"MONDO:0700237"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"Bardet-Biedl syndrome 10","secondary_identifiers":["MESH:C565919","DOID:0110132","GARD:10209","MEDGEN:347909","OMIM:615987","UMLS:C1859568"],"synonyms":[{"name":"BBS10","type":"exact"},{"name":"BBS10 Bardet-Biedl syndrome","type":"exact"},{"name":"Bardet-Biedl syndrome 10","type":"exact"},{"name":"Bardet-Biedl syndrome caused by mutation in BBS10","type":"exact"},{"name":"Bardet-Biedl syndrome type 10","type":"exact"}],"termid":"MONDO:0014438","xrefs":{"Monarch":{"xref_id":"0014438"}}}


id: PBO:0040687
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCAS3 antisense RNA 1","termid":"PBO:0040687"}


id: GO:0019390
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of glucuronosides, compound composed of a hydroxy compound linked to a glucuronate residue.","definition_xrefs":["ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete glucuronoside biosynthetic process (obsolete GO:0019390)","synonyms":[{"name":"glucuronide biosynthesis","type":"exact"},{"name":"glucuronide biosynthetic process","type":"exact"},{"name":"glucuronoside anabolism","type":"exact"},{"name":"glucuronoside biosynthesis","type":"exact"},{"name":"glucuronoside formation","type":"exact"},{"name":"glucuronoside synthesis","type":"exact"}],"termid":"GO:0019390"}


id: MONDO:0006551
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare dermatologic disorder characterized by the accumulation of mucinous material in the hair follicles. In some cases it is associated with lymphoproliferative disorders, most often mycosis fungoides and Hodgkin lymphoma.","definition_xrefs":["NCIT:C82859"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alopecia","termid":"MONDO:0004907"},{"relation_name":"is_a","term_name":"sebaceous gland disorder","termid":"MONDO:0006607"},{"relation_name":"is_a","term_name":"cutaneous focal mucinosis","termid":"MONDO:0021653"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"alopecia mucinosa","secondary_identifiers":["SCTID:27382006","ICD10CM:L65.2","DOID:9905","ICD9:704.09","MEDGEN:1419","PMID:24350019","MESH:D000507","UMLS:C0002173","EFO:1000701"],"synonyms":[{"name":"alopecia Mucinosa","type":"exact"},{"name":"alopecia mucinosa","type":"exact"},{"name":"alopecia mucinosis","type":"exact"},{"name":"cutaneous focal mucinosis of hair follicle","type":"exact"},{"name":"follicular mucinosis","type":"exact"},{"name":"hair follicle cutaneous focal mucinosis","type":"exact"}],"termid":"MONDO:0006551","xrefs":{"Monarch":{"xref_id":"0006551"}}}


id: PATO:0000983
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A permeability quality inhering in a bearer by virtue of the bearer's being incapable of being permeated or pervaded by a liquid (as by osmosis or diffusion).","definition_xrefs":["Biology-online:Biology-online"],"direct_ancestors":[{"relation_name":"is_a","term_name":"permeability","termid":"PATO:0000970"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"impermeable","termid":"PATO:0000983"}


id: PBO:0117113
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SCG3 antisense RNA 1","termid":"PBO:0117113"}


id: PBO:0055717
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lipase maturation factor 2","termid":"PBO:0055717"}


id: PBO:0039101
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenosylhomocysteinase pseudogene 5","termid":"PBO:0039101"}


id: PBO:0116586
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 86 member B1 (gene/pseudogene)","termid":"PBO:0116586"}


id: PBO:0073404
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SET pseudogene 7","termid":"PBO:0073404"}


id: PBO:0089589
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone demethylase SWIRM2","termid":"PBO:0089589"}


id: MONDO:0001464
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant neoplasm involving the sigmoid colon.","direct_ancestors":[{"relation_name":"is_a","term_name":"sigmoid neoplasm","termid":"MONDO:0006971"},{"relation_name":"is_a","term_name":"malignant colon neoplasm","termid":"MONDO:0021063"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"sigmoid colon cancer","secondary_identifiers":["DOID:12192","MEDGEN:509292","ICD9:153.3","SCTID:363410008","UMLS:C0153436"],"synonyms":[{"name":"Ca sigmoid colon","type":"exact"},{"name":"cancer of sigmoid colon","type":"exact"},{"name":"malignant neoplasm of sigmoid colon","type":"exact"},{"name":"malignant sigmoid colon neoplasm","type":"exact"},{"name":"malignant tumor of sigmoid colon","type":"exact"},{"name":"malignant tumour of sigmoid colon","type":"exact"},{"name":"sigmoid colon cancer","type":"exact"}],"termid":"MONDO:0001464","xrefs":{"Monarch":{"xref_id":"0001464"}}}


id: GO:0033342
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of collagen binding.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of collagen binding (obsolete GO:0033342)","synonyms":[{"name":"down regulation of collagen binding","type":"exact"},{"name":"down-regulation of collagen binding","type":"exact"},{"name":"downregulation of collagen binding","type":"exact"},{"name":"inhibition of collagen binding","type":"narrow"}],"termid":"GO:0033342"}


id: PBO:0084433
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAL-activator protein; part of complex locus MAL1; nonfunctional in genomic reference strain S288C","termid":"PBO:0084433"}


id: MONDO:0002085
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"movement disorder","termid":"MONDO:0005395"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benign shuddering attacks","secondary_identifiers":["ICD10CM:G25.83","ICD9:333.93","DOID:1713","MEDGEN:580931","SCTID:446995005","UMLS:C0375200"],"termid":"MONDO:0002085","xrefs":{"Monarch":{"xref_id":"0002085"}}}


id: MONDO:0015359
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete autosomal dominant hereditary demyelinating motor and sensory neuropathy (obsolete MONDO:0015359)","secondary_identifiers":["Orphanet:140453"],"synonyms":[{"name":"AD demyelinating HMSN","type":"exact"}],"termid":"MONDO:0015359","xrefs":{"Monarch":{"xref_id":"0015359"}}}


id: PBO:0045407
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DPPA3 pseudogene 9","termid":"PBO:0045407"}


id: MONDO:0018474
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"13q12.3 microdeletion syndrome is a rare chromosomal anomaly characterized by moderate intellectual disability, speech delay, postnatal microcephaly, eczema or atopic dermatitis, characteristic facial features (malar flattening, prominent nose, underdeveloped alae nasi, smooth philtrum, and thin vermillion of the upper lip), and reduced sensitivity to pain.","definition_xrefs":["Orphanet:412035"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"partial deletion of the long arm of chromosome 13","termid":"MONDO:0016911"},{"relation_name":"is_a","term_name":"epidermal disease","termid":"MONDO:0019268"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"13q12.3 microdeletion syndrome","secondary_identifiers":["MEDGEN:1657124","UMLS:C4750951","GARD:21737"],"synonyms":[{"name":"Del(13)(q12.3)","type":"exact"},{"name":"monosomy 13q12.3","type":"exact"}],"termid":"MONDO:0018474","xrefs":{"Monarch":{"xref_id":"0018474"}}}


id: PBO:0066339
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulator of chromosome condensation 2 pseudogene 1","termid":"PBO:0066339"}


id: PBO:0003323
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial metalloendopeptidase (predicted)","termid":"PBO:0003323"}


id: MONDO:0000138
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Pyle disease","termid":"MONDO:0009943"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"metaphyseal chondrodysplasia","secondary_identifiers":["MEDGEN:120528","UMLS:C0265290","HP:0005871","SCTID:28681006"],"synonyms":[{"name":"metaphyseal chondrodysplasia","type":"exact"},{"name":"metaphyseal chondrodysplasia (disease)","type":"exact"}],"termid":"MONDO:0000138","xrefs":{"Monarch":{"xref_id":"0000138"}}}


id: PBO:0088912
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit VIa","termid":"PBO:0088912"}


id: GO:0009610
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a symbiotic fungus, a fungus living in close physical association with another organism.","definition_xrefs":["ISBN:0198506732","GOC:hb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to symbiont","termid":"GO:0009608"},{"relation_name":"is_a","term_name":"response to fungus","termid":"GO:0009620"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to symbiotic fungus","synonyms":[{"name":"response to symbiotic fungi","type":"exact"}],"termid":"GO:0009610"}


id: MONDO:1012251
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital lethal spasms, non-human animal","termid":"MONDO:1011630"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital lethal spasms, cattle","secondary_identifiers":["OMIA:000927-9913"],"termid":"MONDO:1012251","xrefs":{"Monarch":{"xref_id":"1012251"}}}


id: GO:0048022
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of melanin.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of melanin biosynthetic process","termid":"GO:0048021"},{"relation_name":"is_a","term_name":"negative regulation of secondary metabolite biosynthetic process","termid":"GO:1900377"},{"relation_name":"negatively_regulates","term_name":"melanin biosynthetic process","termid":"GO:0042438"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"negative regulation of melanin biosynthetic process","synonyms":[{"name":"down regulation of melanin biosynthetic process","type":"exact"},{"name":"down-regulation of melanin biosynthetic process","type":"exact"},{"name":"downregulation of melanin biosynthetic process","type":"exact"},{"name":"inhibition of melanin biosynthetic process","type":"narrow"},{"name":"negative regulation of melanin anabolism","type":"exact"},{"name":"negative regulation of melanin biosynthesis","type":"exact"},{"name":"negative regulation of melanin formation","type":"exact"},{"name":"negative regulation of melanin synthesis","type":"exact"}],"termid":"GO:0048022"}


id: GO:0044011
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which microorganisms of the same species attach to and grow on an inanimate surface such as a rock or pipe, and produce extracellular polymers that facilitate attachment and matrix formation, resulting in an alteration in the phenotype of the organisms with respect to growth rate and gene transcription.","definition_xrefs":["GOC:cc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"single-species submerged biofilm formation","termid":"GO:0090609"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"single-species biofilm formation on inanimate substrate","termid":"GO:0044011"}


id: GO:0000742
data:
  {"annotated_genes":["SJAG_02737","SJAG_01370","SJAG_02286","SJAG_02045","SJAG_00810","SJAG_01613","SJAG_04936"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[79006,88115,91358,91749,99580,111848,117328],"is_not":false,"summary":null,"term":"GO:0000742"}]},"cv_name":"biological_process","definition":"During sexual reproduction, the creation of a single nucleus from multiple nuclei as a result of fusing the lipid bilayers that surround each nuclei. This occurs after cytogamy.","definition_xrefs":["GOC:elh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"karyogamy","termid":"GO:0000741"},{"relation_name":"part_of","term_name":"conjugation with cellular fusion","termid":"GO:0000747"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00810":null,"SJAG_01370":null,"SJAG_01613":null,"SJAG_02045":null,"SJAG_02286":null,"SJAG_02737":null,"SJAG_04936":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0000747"}],"interesting_parent_ids":["GO:0008150","GO:0000747"],"is_obsolete":false,"name":"karyogamy involved in conjugation with cellular fusion","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"karyogamy during conjugation with cellular fusion","type":"related"}],"termid":"GO:0000742","terms_by_termid":{"GO:0000742":null}}


id: MONDO:0019341
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete tuberous sclerosis complex (obsolete MONDO:0019341)","secondary_identifiers":["NANDO:2200826","NANDO:1200607"],"termid":"MONDO:0019341","xrefs":{"Monarch":{"xref_id":"0019341"}}}


id: GO:0052543
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which callose is transported to, and/or maintained in, the cell wall. Callose is a linear 1,3-beta-d-glucan formed from UDP-glucose and is found in certain plant cell walls.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell wall thickening","termid":"GO:0052386"},{"relation_name":"is_a","term_name":"callose localization","termid":"GO:0052545"},{"relation_name":"is_a","term_name":"cellular macromolecule localization","termid":"GO:0070727"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0071554"}],"interesting_parent_ids":["GO:0051179","GO:0071554","GO:0008150"],"is_obsolete":false,"name":"callose deposition in cell wall","synonyms":[{"name":"callose localization in cell wall","type":"exact"},{"name":"cell wall callose deposition","type":"exact"},{"name":"cell wall callose localization","type":"exact"}],"termid":"GO:0052543"}


id: PBO:0092008
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small subunit (15S) rRNA, rns","termid":"PBO:0092008"}


id: SO:1000120
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000120 sequence_variant_causing_inactive_catalytic_site (obsolete SO:1000120)","synonyms":[{"name":"mutation causing inactive catalytic site","type":"related"},{"name":"sequence variant causing inactive catalytic site","type":"exact"}],"termid":"SO:1000120"}


id: MONDO:0001747
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"enthesopathy","termid":"MONDO:0002183"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tibial collateral ligament bursitis","secondary_identifiers":["UMLS:C0158315","ICD9:726.62","DOID:13566","MEDGEN:510511","SCTID:44245003"],"termid":"MONDO:0001747","xrefs":{"Monarch":{"xref_id":"0001747"}}}


id: PBO:0000381
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospho-2-dehydro-3-deoxyheptonate aldolase (predicted)","termid":"PBO:0000381"}


id: MONDO:0011117
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iris pigment epithelium anomalies","secondary_identifiers":["UMLS:C1866608","OMIM:601616","MESH:C566651","MEDGEN:357091"],"synonyms":[{"name":"cysts of iris pigment epithelium","type":"related"},{"name":"iris pigment epithelium anomalies","type":"exact"},{"name":"ruffles and cysts of iris pigment epithelium","type":"related"}],"termid":"MONDO:0011117","xrefs":{"Monarch":{"xref_id":"0011117"}}}


id: MONDO:0015912
data:
  {"annotated_genes":["SJAG_03703","SJAG_02431"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86723,86724],"is_not":false,"summary":null,"term":"MONDO:0015912"}]},"cv_name":"mondo","definition":"An inherited giant platelet disorder with a complex phenotype characterized by congenital thrombocytopenia and possible subsequent manifestations of sensorineural hearing loss, presenile cataracts, elevation of liver enzymes, and/or progressive nephropathy often leading to end-stage renal disease (ESRD). Epstein syndrome, Fechtner syndrome, May-Hegglin anomaly and Sebastian syndrome, previously described as distinct disorders, represent some of the different clinical presentations of MYH9-RD.","definition_xrefs":["Orphanet:182050"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited bleeding disorder, platelet-type","termid":"MONDO:0000009"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"syndromic constitutional thrombocytopenia","termid":"MONDO:0018795"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02431":null,"SJAG_03703":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"macrothrombocytopenia and granulocyte inclusions with or without nephritis or sensorineural hearing loss","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NCIT:C158788","EFO:0009646","ICD9:759.89","OMIM:600208","OMIM:153640","ICD9:582.89","Orphanet:1019","OMIM:155100","Orphanet:1984","Orphanet:850","ICD9:287.33","DOID:0060651","MESH:C537831","Orphanet:807","MEDGEN:1704278","OMIM:605249","SCTID:234484005","GARD:180","NCIT:C131646","SCTID:234485006","SCTID:712922002","UMLS:C5200934","SCTID:236422008"],"synonyms":[{"name":"Alport syndrome with macrothrombocytopenia","type":"related"},{"name":"Alport syndrome with macrothrombocytopenia, formerly","type":"related"},{"name":"Brodie Chole griffin syndrome","type":"related"},{"name":"Brodie Chole gryphon syndrome","type":"related"},{"name":"Dohle leukocyte inclusions with giant platelets","type":"related"},{"name":"Epstein syndrome","type":"exact"},{"name":"FTNS","type":"related"},{"name":"Fechtner syndrome","type":"exact"},{"name":"MHA","type":"related"},{"name":"MYH-9 related disease","type":"exact"},{"name":"MYH9 related disorders","type":"related"},{"name":"MYH9 related thrombocytopenia","type":"related"},{"name":"MYH9-RD","type":"exact"},{"name":"MYH9-related disease","type":"exact"},{"name":"MYH9-related disorder","type":"exact"},{"name":"MYH9-related syndrome","type":"exact"},{"name":"MYH9-related syndromic thrombocytopenia","type":"exact"},{"name":"May-Hegglin anomaly","type":"exact"},{"name":"May-Hegglin thrombocytopenia","type":"related"},{"name":"SBS","type":"related"},{"name":"Sebastian platelet syndrome","type":"exact"},{"name":"Sebastian syndrome","type":"exact"},{"name":"bleeding disorder, Platelet-type, 6","type":"related"},{"name":"giant platelet syndrome with thrombocytopenia","type":"exact"},{"name":"macrothrombocytopenia and granulocyte inclusions with or without nephritis or sensorineural hearing loss","type":"exact"},{"name":"macrothrombocytopenia and progressive sensorineural deafness","type":"exact"},{"name":"macrothrombocytopenia progressive deafness","type":"related"},{"name":"macrothrombocytopenia with dispersed leukocytic inclusions","type":"related"},{"name":"macrothrombocytopenia with leukocyte inclusions","type":"related"},{"name":"macrothrombocytopenia, nephritis, and deafness","type":"related"},{"name":"macrothrombocytopenia, nephritis, deafness, and leukocyte inclusions","type":"related"},{"name":"matins","type":"related"}],"termid":"MONDO:0015912","terms_by_termid":{"MONDO:0015912":null},"xrefs":{"Monarch":{"xref_id":"0015912"}}}


id: GO:0080062
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 6-alkylaminopurine + UDP-D-glucose = 6-alkylamino-9-beta-D-glucosylpurine + H+ + UDP. This reaction is an N-glucosylation event.","definition_xrefs":["PMID:15342621","KEGG_REACTION:R08369"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0016757","GO:0003824"],"is_obsolete":false,"name":"cytokinin 9-beta-glucosyltransferase activity","termid":"GO:0080062"}


id: GO:0072570
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to ADP-D-ribose, an ADP-aldose having ribose as the aldose fragment.","definition_xrefs":["GOC:sart","PMID:20088964","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anion binding","termid":"GO:0043168"},{"relation_name":"is_a","term_name":"carbohydrate derivative binding","termid":"GO:0097367"},{"relation_name":"is_a","term_name":"nucleoside phosphate binding","termid":"GO:1901265"},{"relation_name":"is_a","term_name":"heterocyclic compound binding","termid":"GO:1901363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"ADP-D-ribose binding","synonyms":[{"name":"ADP-ribose binding","type":"broad"}],"termid":"GO:0072570"}


id: PBO:0017727
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent DNA helicase/ ubiquitin-protein ligase E3 (predicted)","termid":"PBO:0017727"}


id: MOD:01359
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Isotopic label - Use when labelling post-digest","definition_xrefs":["PubMed:15602776","Unimod:687#K"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"},{"relation_name":"is_a","term_name":"isotope tagged reagent derivatized residue","termid":"MOD:01426"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Bruker Daltonics SERVA-ICPL(TM) quantification chemistry, medium form - site K","synonyms":[{"name":"Bruker Daltonics SERVA-ICPL(TM) quantification chemistry, medium form","type":"related"},{"name":"ICPL:2H(4)","type":"related"}],"termid":"MOD:01359"}


id: MONDO:1010736
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any leukocyte adhesion deficiency that occurs in dogs due to a mutation in the FERMT3 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukocyte adhesion deficiency, non-human animal","termid":"MONDO:1012580"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leukocyte adhesion deficiency, FERMT3-related, dog","secondary_identifiers":["OMIA:001525-9615"],"synonyms":[{"name":"leukocyte adhesion deficiency type III, dog","type":"related"}],"termid":"MONDO:1010736","xrefs":{"Monarch":{"xref_id":"1010736"}}}


id: MONDO:0005510
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Collection of urine in the renal pelvis that results in dilatation of the renal pelvis and calyces. It is caused by obstruction of urine flow, nephrolithiasis, or vesicoureteral reflux. Signs and symptoms include flank pain, nausea, vomiting, fever, and dysuria.","definition_xrefs":["EFO:0005562"],"direct_ancestors":[{"relation_name":"is_a","term_name":"urinary tract obstruction","termid":"MONDO:0003330"},{"relation_name":"is_a","term_name":"kidney disorder","termid":"MONDO:0005240"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"hydronephrosis","secondary_identifiers":["SCTID:43064006","NCIT:C26796","UMLS:C0020295","MESH:D006869","ICD9:591","DOID:11111","MEDGEN:42531"],"termid":"MONDO:0005510","xrefs":{"Monarch":{"xref_id":"0005510"}}}


id: PBO:0029293
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_localization_to_nucleus_during_meiosis","termid":"PBO:0029293"}


id: GO:0072039
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the occurrence or rate of mesenchymal stem cell death by apoptotic process that contributes to the shaping of the nephron.","definition_xrefs":["GOC:mtg_apoptosis","GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of apoptotic process involved in morphogenesis","termid":"GO:1902337"},{"relation_name":"is_a","term_name":"regulation of somatic stem cell population maintenance","termid":"GO:1904672"},{"relation_name":"is_a","term_name":"regulation of mesenchymal cell apoptotic process","termid":"GO:2001053"},{"relation_name":"regulates","term_name":"mesenchymal stem cell maintenance involved in nephron morphogenesis","termid":"GO:0072038"},{"relation_name":"regulates","term_name":"mesenchymal cell apoptotic process involved in nephron morphogenesis","termid":"GO:1901145"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of mesenchymal cell apoptotic process involved in nephron morphogenesis","synonyms":[{"name":"regulation of mesenchymal stem cell apoptosis involved in nephron morphogenesis","type":"narrow"},{"name":"regulation of mesenchymal stem cell apoptotic process involved in nephron morphogenesis","type":"exact"}],"termid":"GO:0072039"}


id: MONDO:0013309
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"partial deletion of the short arm of chromosome 2","termid":"MONDO:0016884"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 2p12-p11.2 deletion syndrome","secondary_identifiers":["OMIM:613564","UMLS:C3150804","DOID:0060414","MEDGEN:462154"],"synonyms":[{"name":"chromosome 2p12-p11.2 deletion syndrome","type":"exact"}],"termid":"MONDO:0013309","xrefs":{"Monarch":{"xref_id":"0013309"}}}


id: GO:0019779
data:
  {"annotated_genes":["SJAG_00645"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73863],"is_not":false,"summary":null,"term":"GO:0019779"}]},"cv_name":"molecular_function","definition":"Catalysis of the activation of the small ubiquitin-related modifier APG8, through the formation of an ATP-dependent high-energy thiolester bond.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ubiquitin-like modifier activating enzyme activity","termid":"GO:0008641"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00645":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0003674","GO:0016874","GO:0140096","GO:0003824"],"is_obsolete":false,"name":"Atg8 activating enzyme activity","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"APG7","type":"exact"},{"name":"APG8 activating enzyme activity","type":"related"}],"termid":"GO:0019779","terms_by_termid":{"GO:0019779":null}}


id: PBO:0005271
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase Oca2","termid":"PBO:0005271"}


id: GO:0050661
data:
  {"annotated_genes":["SJAG_02135","SJAG_06622","SJAG_02945","SJAG_00027","SJAG_00660","SJAG_02148","SJAG_01198","SJAG_03852","SJAG_02297","SJAG_02696","SJAG_04652","SJAG_00636","SJAG_00972","SJAG_04810","SJAG_03828","SJAG_02488","SJAG_04608","SJAG_03476","SJAG_03152","SJAG_00234","SJAG_04270","SJAG_01162","SJAG_06621","SJAG_04032","SJAG_03903","SJAG_03115","SJAG_05015"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[57629,58601,59758,60234,62746,62940,64673,64706,64981,65131,65979,68439,68530,70165,71394,80761,94477,104826,109789,109790,109791,109794,115189],"is_not":false,"summary":null,"term":"GO:0050661"},{"annotations":[58998],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070401"},{"annotations":[103407,115172,74749],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070402"}]},"cv_name":"molecular_function","definition":"Binding to nicotinamide-adenine dinucleotide phosphate, a coenzyme involved in many redox and biosynthetic reactions; binding may be to either the oxidized form, NADP+, or the reduced form, NADPH.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenyl nucleotide binding","termid":"GO:0030554"}],"gene_count":27,"genes_by_uniquename":{"SJAG_00027":null,"SJAG_00234":null,"SJAG_00636":null,"SJAG_00660":null,"SJAG_00972":null,"SJAG_01162":null,"SJAG_01198":null,"SJAG_02135":null,"SJAG_02148":null,"SJAG_02297":null,"SJAG_02488":null,"SJAG_02696":null,"SJAG_02945":null,"SJAG_03115":null,"SJAG_03152":null,"SJAG_03476":null,"SJAG_03828":null,"SJAG_03852":null,"SJAG_03903":null,"SJAG_04032":null,"SJAG_04270":null,"SJAG_04608":null,"SJAG_04652":null,"SJAG_04810":null,"SJAG_05015":null,"SJAG_06621":null,"SJAG_06622":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"NADP binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"synonyms":[{"name":"NADP or NADPH binding","type":"related"},{"name":"NADP+ or NADPH binding","type":"related"},{"name":"nicotinamide adenine dinucleotide phosphate binding","type":"exact"}],"termid":"GO:0050661","terms_by_termid":{"GO:0050661":null,"GO:0070401":null,"GO:0070402":null}}


id: GO:0120552
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a branched-chain acyl-CoA by the oxidative decarboxylation of a branched-chain alpha-keto acid derived from L-leucine, L-isoleucine or L-valine. This pathway comprises a series of three reactions carried out by a multisubunit complex called the 'branched-chain alpha-keto acid dehydrogenase complex', even though branched-chain alpha-keto acid dehydrogenase activity describes only one of those reactions. The combination of the three reactions can be summarized as: 3-methyl-2-oxobutanoate + coenzyme A + NAD+ -> branched-chain acyl-CoA + CO2 + NADH. Specific substrates include 3-methyl-2-oxobutanoate (a transamination product of L-valine), (S)-3-methyl-2-oxopentanoate (a transamination product of L-isoleucine) and 4-methyl-2-oxopentanoate (a transamination product of L-leucine), which generate the products 2-methylpropanoyl-CoA, 2-methylbutanoyl-CoA and 3-methylbutanoyl-CoA, respectively.","definition_xrefs":["MetaCyc:PWY-5046"],"direct_ancestors":[{"relation_name":"is_a","term_name":"coenzyme A metabolic process","termid":"GO:0015936"},{"relation_name":"is_a","term_name":"carboxylic acid metabolic process","termid":"GO:0019752"},{"relation_name":"is_a","term_name":"fatty-acyl-CoA biosynthetic process","termid":"GO:0046949"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0055086","GO:0006790","GO:0008150","GO:0006629","GO:0044281"],"is_obsolete":false,"name":"branched-chain alpha-keto acid decarboxylation to branched-chain acyl-CoA","synonyms":[{"name":"branched-chain 2-oxo acid dehydrogenase system","type":"exact"},{"name":"branched-chain alpha-keto acid dehydrogenase system","type":"exact"}],"termid":"GO:0120552"}


id: GO:0102163
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: coenzyme A + a (3R)-3-hydroxyacyl-[acyl-carrier protein] = a (3R)-3-hydroxyacyl-CoA + a holo-[acyl-carrier protein].","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 3-hydroxyacyl-CoA-acyl carrier protein transferase activity (obsolete GO:0102163)","termid":"GO:0102163"}


id: PBO:0077666
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TNF receptor superfamily member 12A","termid":"PBO:0077666"}


id: GO:1902339
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of apoptotic process involved in morphogenesis.","definition_xrefs":["GOC:TermGenie","PMID:12202035","GOC:sart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of apoptotic process involved in morphogenesis","termid":"GO:1902337"},{"relation_name":"is_a","term_name":"positive regulation of apoptotic process involved in development","termid":"GO:1904747"},{"relation_name":"positively_regulates","term_name":"apoptotic process involved in morphogenesis","termid":"GO:0060561"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of apoptotic process involved in morphogenesis","synonyms":[{"name":"activation of apoptosis involved in development","type":"related"},{"name":"activation of apoptosis involved in morphogenesis","type":"narrow"},{"name":"activation of apoptotic process involved in morphogenesis","type":"narrow"},{"name":"activation of morphogenetic apoptosis","type":"related"},{"name":"positive regulation of apoptosis involved in development","type":"related"},{"name":"positive regulation of apoptosis involved in morphogenesis","type":"narrow"},{"name":"positive regulation of morphogenetic apoptosis","type":"related"},{"name":"up regulation of apoptosis involved in development","type":"related"},{"name":"up regulation of apoptosis involved in morphogenesis","type":"narrow"},{"name":"up regulation of apoptotic process involved in morphogenesis","type":"exact"},{"name":"up regulation of morphogenetic apoptosis","type":"related"},{"name":"up-regulation of apoptosis involved in development","type":"related"},{"name":"up-regulation of apoptosis involved in morphogenesis","type":"narrow"},{"name":"up-regulation of apoptotic process involved in morphogenesis","type":"exact"},{"name":"up-regulation of morphogenetic apoptosis","type":"related"},{"name":"upregulation of apoptosis involved in development","type":"related"},{"name":"upregulation of apoptosis involved in morphogenesis","type":"narrow"},{"name":"upregulation of apoptotic process involved in morphogenesis","type":"exact"},{"name":"upregulation of morphogenetic apoptosis","type":"related"}],"termid":"GO:1902339"}


id: PBO:0051425
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable 3-2 (pseudogene)","termid":"PBO:0051425"}


id: PBO:0075262
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin 18 pseudogene 15","termid":"PBO:0075262"}


id: FYPO:0001203
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype that reflects increased occurrence of coflocculation. In coflocculation, yeast cells coaggregate with cells of another species, usually bacteria.","definition_xrefs":["PomBase:mah","PMID:11472912"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased flocculation","termid":"FYPO:0000155"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000003","FYPO:0005447"],"is_obsolete":false,"name":"coflocculating cells","synonyms":[{"name":"co-flocculating cells","type":"exact"},{"name":"increased coflocculation","type":"exact"}],"termid":"FYPO:0001203"}


id: PBO:0084547
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Member of the PUF protein family; PUF family is defined by the presence of Pumilio homology domains that confer RNA binding activity; preferentially binds mRNAs encoding nucleolar ribosomal RNA-processing factors","termid":"PBO:0084547"}


id: PBO:0045650
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox A pseudogene 8","termid":"PBO:0045650"}


id: PBO:0083722
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ESCRT-I subunit required to stabilize ESCRT-I core complex oligomers; the ESCRT-I core complex (Stp22p, Vps28p, Srn2p) is involved in ubiquitin-dependent sorting of proteins into the endosome; deletion mutant is sensitive to rapamycin and nystatin","termid":"PBO:0083722"}


id: PR:Q9UTE3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- seb1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UTE3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rpb7-binding protein seb1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC222.09","synonyms":[{"name":"Spom972h-seb1","type":"exact"}],"termid":"PR:Q9UTE3"}


id: GO:0086057
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a calcium ion by a voltage-gated channel across the plasma membrane of a bundle of His cardiac muscle cell that contributes to the depolarization phase of an action potential. A voltage-gated channel is a channel whose open state is dependent on the voltage across the membrane in which it is embedded.","definition_xrefs":["GOC:mtg_cardiac_conduct_nov11","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"voltage-gated calcium channel activity involved in cardiac muscle cell action potential","termid":"GO:0086007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"voltage-gated calcium channel activity involved in bundle of His cell action potential","synonyms":[{"name":"voltage-gated calcium channel activity involved in bundle of His cardiac muscle cell action potential","type":"exact"}],"termid":"GO:0086057"}


id: GO:0046819
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which proteins mediate their own secretion across the outer membrane through a beta-barrel pore structure formed by the C-terminal domain of the protein precursor. Following passage across the outer membrane, the mature protein is released from the pore by an autocatalytic activity. Proteins secreted by the Type V system are first translocated across the plasma membrane by the Sec pathway.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein secretion","termid":"GO:0009306"},{"relation_name":"is_a","term_name":"protein transport across the cell outer membrane","termid":"GO:0098776"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0055085","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"protein secretion by the type V secretion system","synonyms":[{"name":"autotransporter system","type":"exact"},{"name":"protein secretion by the autotransporter system","type":"exact"},{"name":"protein secretion by the type V protein secretion system","type":"exact"},{"name":"type V protein secretion system","type":"exact"}],"termid":"GO:0046819"}


id: PBO:0082204
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alpha-1,2-mannosyltransferase; responsible for addition of the first alpha-1,2-linked mannose to form the branches on the mannan backbone of oligosaccharides, localizes to an early Golgi compartment","termid":"PBO:0082204"}


id: GO:0036218
data:
  {"annotated_genes":["SJAG_01651"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[97461],"is_not":false,"summary":null,"term":"GO:0036218"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: dTTP + H2O = dTMP + H+ + diphosphate.","definition_xrefs":["PMID:22531138","RHEA:28534","GOC:dgf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside triphosphate diphosphatase activity","termid":"GO:0047429"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01651":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0047429"}],"interesting_parent_ids":["GO:0047429","GO:0003674","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"dTTP diphosphatase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:RXN0-5107"],"synonyms":[{"name":"dTTP pyrophosphatase activity","type":"exact"}],"termid":"GO:0036218","terms_by_termid":{"GO:0036218":null}}


id: PBO:0056581
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MCTS family member 2","termid":"PBO:0056581"}


id: GO:1905044
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of Schwann cell proliferation involved in axon regeneration.","definition_xrefs":["GO_REF:0000058","GOC:BHF","GOC:BHF_miRNA","PMID:22393241","GOC:TermGenie","GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of Schwann cell proliferation","termid":"GO:0010624"},{"relation_name":"regulates","term_name":"Schwann cell proliferation involved in axon regeneration","termid":"GO:0014011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of Schwann cell proliferation involved in axon regeneration","termid":"GO:1905044"}


id: PBO:0030142
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_L-thialysine","termid":"PBO:0030142"}


id: PBO:0076349
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synaptotagmin 15","termid":"PBO:0076349"}


id: PR:Q8NKC0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBPB21E7.09 gene.","definition_xrefs":["UniProtKB:Q8NKC0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-asparaginase 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBPB21E7.09","synonyms":[{"name":"L-asparagine amidohydrolase 3 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SPBPB21E7.09","type":"exact"}],"termid":"PR:Q8NKC0"}


id: PBO:0063188
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"photoreceptor cilium actin regulator","termid":"PBO:0063188"}


id: GO:0006642
data:
  {"annotated_genes":["SJAG_02907","SJAG_02089","SJAG_02487","SJAG_02683"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90476,92258,94038,115174],"is_not":false,"summary":null,"term":"GO:0006642"}]},"cv_name":"biological_process","definition":"The release of triglycerides, any triester of glycerol, from storage within cells or tissues, making them available for metabolism.","definition_xrefs":["PMID:15713625","PMID:11943743","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triglyceride metabolic process","termid":"GO:0006641"}],"gene_count":4,"genes_by_uniquename":{"SJAG_02089":null,"SJAG_02487":null,"SJAG_02683":null,"SJAG_02907":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"triglyceride mobilization","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"triacylglycerol mobilization","type":"exact"}],"termid":"GO:0006642","terms_by_termid":{"GO:0006642":null}}


id: MONDO:0016255
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A primary, benign or malignant neoplasm of the uterine corpus characterized by the presence of an epithelial and a mesenchymal component. Representative examples include adenomyoma, adenosarcoma, and carcinosarcoma.","definition_xrefs":["NCIT:C40181"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete rare cancer of corpus uteri (obsolete MONDO:0016253)","termid":"MONDO:0016253"},{"relation_name":"is_a","term_name":"mixed neoplasm","termid":"MONDO:0021043"},{"relation_name":"is_a","term_name":"corpus uteri neoplasm","termid":"MONDO:0021254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uterine corpus mixed epithelial and mesenchymal neoplasm","secondary_identifiers":["Orphanet:213589","UMLS:C1519858","MEDGEN:311425","GARD:20472"],"synonyms":[{"name":"body of uterus mixed neoplasm","type":"exact"},{"name":"malignant mixed epithelial and mesenchymal tumor of corpus uteri","type":"related"},{"name":"malignant mixed epithelial and mesenchymal tumour of corpus uteri","type":"related"},{"name":"mixed epithelial and mesenchymal cancer of corpus uteri","type":"narrow"},{"name":"uterine corpus mixed epithelial and mesenchymal neoplasm","type":"exact"},{"name":"uterine corpus mixed epithelial and mesenchymal tumor","type":"exact"},{"name":"uterine corpus mixed epithelial and mesenchymal tumour","type":"exact"}],"termid":"MONDO:0016255","xrefs":{"Monarch":{"xref_id":"0016255"}}}


id: GO:0046177
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of D-gluconate, the anion of D-gluconic acid, the aldonic acid derived from glucose.","definition_xrefs":["ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete D-gluconate catabolic process (obsolete GO:0046177)","synonyms":[{"name":"D-gluconate breakdown","type":"exact"},{"name":"D-gluconate catabolism","type":"exact"},{"name":"D-gluconate degradation","type":"exact"}],"termid":"GO:0046177"}


id: GO:0061380
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the superior colliculus over time, from its formation to the mature structure. The superior colliculus is also known as the optic tectum or simply tectum and is a paired structure that forms a major component of the vertebrate midbrain.","definition_xrefs":["GOC:dph","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"corpora quadrigemina development","termid":"GO:0061378"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"superior colliculus development","termid":"GO:0061380"}


id: MONDO:0000195
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete atrial standstill (obsolete MONDO:0000195)","termid":"MONDO:0000195","xrefs":{"Monarch":{"xref_id":"0000195"}}}


id: MONDO:0015338
data:
  {"annotated_genes":["SJAG_02200","SJAG_02165","SJAG_04270","SJAG_04995","SJAG_03249"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85979],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008726"},{"annotations":[85455],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0020667"},{"annotations":[85803],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014558"},{"annotations":[85909,85908],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009039"},{"annotations":[86980],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013740"}]},"cv_name":"mondo","definition":"A craniosynostosis that is part of a larger syndrome.","definition_xrefs":["MONDO:patterns/syndromic"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"craniosynostosis","termid":"MONDO:0015469"},{"relation_name":"is_a","term_name":"skeletal dysplasia","termid":"MONDO:0018230"}],"gene_count":5,"genes_by_uniquename":{"SJAG_02165":null,"SJAG_02200":null,"SJAG_03249":null,"SJAG_04270":null,"SJAG_04995":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"syndromic craniosynostosis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1842203","Orphanet:139393","UMLS:C5680624","GARD:19911"],"synonyms":[{"name":"syndrome associated with craniosynostosis","type":"exact"},{"name":"syndromic craniosynostosis","type":"exact"}],"termid":"MONDO:0015338","terms_by_termid":{"MONDO:0008726":null,"MONDO:0009039":null,"MONDO:0013740":null,"MONDO:0014558":null,"MONDO:0020667":null},"xrefs":{"Monarch":{"xref_id":"0015338"}}}


id: PBO:0039994
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP ribosylation factor like GTPase 8B","termid":"PBO:0039994"}


id: PBO:0005463
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dolichyl-di-phosphooligosaccharide-protein glycotransferase subunit Wbp1 (predicted)","termid":"PBO:0005463"}


id: FYPO:0007599
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A transcription regulation phenotype observed in the vegetative growth phase of the life cycle in which chromatin silencing is increased at a site where silencing can be triggered by the ectopic tethering of a protein.","definition_xrefs":["PomBase:mah","PMID:23613586"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromatin silencing","termid":"FYPO:0000144"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0006551","FYPO:0001320"],"is_obsolete":false,"name":"increased chromatin silencing at ectopic tethering site","synonyms":[{"name":"increased chromatin silencing at ectopic tethering site","type":"related"},{"name":"increased chromatin silencing at ectopic tethering site during vegetative growth","type":"exact"}],"termid":"FYPO:0007599"}


id: PBO:0061096
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuroligin 1","termid":"PBO:0061096"}


id: PBO:0068658
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 39, pseudogene","termid":"PBO:0068658"}


id: MONDO:1010323
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Entropion that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of orbital region, non-human animal","termid":"MONDO:1011315"},{"relation_name":"is_a","term_name":"disorder of visual system, non-human animal","termid":"MONDO:1011316"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"entropion, non-human animal","secondary_identifiers":["OMIA:000337"],"termid":"MONDO:1010323","xrefs":{"Monarch":{"xref_id":"1010323"}}}


id: GO:0102947
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H+ + (+)-delta-cadinene + NADPH + O2 = 8-hydroxy-(+)-delta-cadinene + NADP + H2O.","definition_xrefs":["GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"(+)-delta-cadinene-8-hydroxylase activity","secondary_identifiers":["MetaCyc:RXN-9045"],"termid":"GO:0102947"}


id: PBO:0070563
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 29","termid":"PBO:0070563"}


id: PBO:0036310
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-protein ligase E3 involved in vesicle docking Pep5/Vps11-like (predicted)","termid":"PBO:0036310"}


id: PBO:0034085
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-disposition_of","termid":"PBO:0034085"}


id: MONDO:0007121
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aniridia, microcornea, and spontaneously Reabsorbed cataract","secondary_identifiers":["MESH:C566280","OMIM:106230","UMLS:C1862867","MEDGEN:350777"],"synonyms":[{"name":"aniridia, microcornea, and spontaneously Reabsorbed cataract","type":"exact"}],"termid":"MONDO:0007121","xrefs":{"Monarch":{"xref_id":"0007121"}}}


id: SO:0002332
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A biological region implicated in inherited changes caused by mechanisms other than changes in the underlying DNA sequence.","definition_xrefs":["SO:ds"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"epigenetically_modified","termid":"SO:0000133"},{"relation_name":"is_a","term_name":"epigenetically_modified_region","termid":"SO:0001720"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epigenomically_modified_region","secondary_identifiers":["https://epi.grants.cancer.gov/epigen/#\\:~\\:text=mail.nih.gov-\\,Overview\\,a%20cell%20or%20entire%20organism."],"synonyms":[{"name":"epigenomically modified region","type":"exact"}],"termid":"SO:0002332"}


id: PBO:0058680
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6808","termid":"PBO:0058680"}


id: GO:0004383
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: GTP = 3',5'-cyclic GMP + diphosphate.","definition_xrefs":["EC:4.6.1.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclase activity","termid":"GO:0009975"},{"relation_name":"is_a","term_name":"phosphorus-oxygen lyase activity","termid":"GO:0016849"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0009975"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0009975","GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"guanylate cyclase activity","secondary_identifiers":["MetaCyc:GUANYLCYC-RXN","Reactome:R-HSA-392152","Reactome:R-HSA-74885","RHEA:13665"],"synonyms":[{"name":"GTP diphosphate-lyase (cyclizing) activity","type":"related"},{"name":"GTP diphosphate-lyase (cyclizing; 3',5'-cyclic-GMP-forming) activity","type":"related"},{"name":"guanyl cyclase activity","type":"related"},{"name":"guanylyl cyclase activity","type":"exact"},{"name":"receptor guanylate cyclase activity","type":"narrow"}],"termid":"GO:0004383"}


id: MONDO:0014221
data:
  {"annotated_genes":["SJAG_04192"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86160],"is_not":false,"summary":null,"term":"MONDO:0014221"}]},"cv_name":"mondo","definition":"Triosephosphate isomerase (TPI) deficiency is a severe autosomal recessive inherited multisystem disorder of glycolytic metabolism characterized by hemolytic anemia and neurodegeneration.","definition_xrefs":["Orphanet:868"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucose metabolism disease","termid":"MONDO:0002908"},{"relation_name":"is_a","term_name":"familial hemolytic anemia","termid":"MONDO:0003689"},{"relation_name":"is_a","term_name":"disorder of glycolysis","termid":"MONDO:0017688"},{"relation_name":"is_a","term_name":"anemia due to erythrocyte enzyme disorder","termid":"MONDO:0020585"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04192":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002280"},{"rel_name":"is_a","termid":"MONDO:0019254"},{"rel_name":"is_a","termid":"MONDO:0037792"}],"interesting_parent_ids":["MONDO:0019254","MONDO:0037792","MONDO:0005570","MONDO:0005066","MONDO:0002280"],"is_obsolete":false,"name":"triosephosphate isomerase deficiency","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0050884","OMIM:615512","UMLS:C1860808","MESH:C566029","ICD9:282.3","NORD:1793","GARD:5287","NCIT:C131652","SCTID:234405009","MEDGEN:349893"],"synonyms":[{"name":"TPI deficiency","type":"related"},{"name":"TPID","type":"related"},{"name":"hemolytic anaemia due to triosephosphate isomerase deficiency","type":"exact"},{"name":"hemolytic anemia due to triosephosphate isomerase deficiency","type":"exact"},{"name":"triose phosphate-isomerase deficiency","type":"exact"},{"name":"triosephosphate isomerase deficiency","type":"exact"}],"termid":"MONDO:0014221","terms_by_termid":{"MONDO:0014221":null},"xrefs":{"Monarch":{"xref_id":"0014221"}}}


id: PBO:0040135
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"activating signal cointegrator 1 complex subunit 1","termid":"PBO:0040135"}


id: PBO:0060915
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurofibromin 1 pseudogene 2","termid":"PBO:0060915"}


id: PBO:0080493
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"von Willebrand factor C domain containing 2 like","termid":"PBO:0080493"}


id: PR:P28189
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 40S ribosomal protein S13 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01149","PRO:DNx","PANTHER:PTHR11885:SF1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S13 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6F6.07c","secondary_identifiers":["UniProtKB:P28189"],"synonyms":[{"name":"Spom972h-RPS13","type":"exact"}],"termid":"PR:P28189"}


id: GO:1900549
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving N',N'',N'''-triacetylfusarinine C.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secondary metabolic process","termid":"GO:0019748"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"N',N'',N'''-triacetylfusarinine C metabolic process","synonyms":[{"name":"N',N'',N'''-triacetylfusarinine C metabolism","type":"exact"}],"termid":"GO:1900549"}


id: MONDO:0010301
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete thrombocythemia, X-linked (obsolete MONDO:0010301)","termid":"MONDO:0010301","xrefs":{"Monarch":{"xref_id":"0010301"}}}


id: PBO:0071109
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 111","termid":"PBO:0071109"}


id: PBO:0067226
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 296, pseudogene","termid":"PBO:0067226"}


id: PBO:0040426
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase H+ transporting V0 subunit e1 pseudogene 3","termid":"PBO:0040426"}


id: PBO:0041252
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C1orf167 antisense RNA 1","termid":"PBO:0041252"}


id: PBO:0061459
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nebulin related anchoring protein","termid":"PBO:0061459"}


id: GO:0090415
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 7-hydroxymethyl chlorophyll a + 2 reduced ferredoxin + 2 H+ chlorophyll a + 2 oxidized ferredoxin + H2O.","definition_xrefs":["GOC:kad","PMID:21934147","RHEA:53544"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH or CH2 groups, with an iron-sulfur protein as acceptor","termid":"GO:0052592"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"7-hydroxymethyl chlorophyll a reductase activity","secondary_identifiers":["EC:1.17.7.2"],"termid":"GO:0090415"}


id: PBO:0064870
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 1 regulatory subunit 26 pseudogene 3","termid":"PBO:0064870"}


id: PBO:0062790
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"origin recognition complex subunit 4","termid":"PBO:0062790"}


id: GO:0001827
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell fate commitment of precursor cells that will become inner cell mass cells.","definition_xrefs":["ISBN:0124020607","ISBN:0198542771","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate commitment","termid":"GO:0045165"},{"relation_name":"part_of","term_name":"inner cell mass cell differentiation","termid":"GO:0001826"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"inner cell mass cell fate commitment","termid":"GO:0001827"}


id: GO:0099165
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A network of proteins adjacent to the postsynaptic membrane of a symmetric synapse. Its major components include that spatially and functionally organize neurotransmitter receptors in the adjacent membrane, such as anchoring and scaffolding molecules, signaling enzymes and cytoskeletal components. This structure is not as thick or electron dense as the postsynaptic density found in asymmetric synapses.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"postsynaptic specialization, intracellular component","termid":"GO:0099091"},{"relation_name":"part_of","term_name":"postsynaptic specialization of symmetric synapse","termid":"GO:0099629"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"postsynaptic specialization of symmetric synapse, intracellular component","termid":"GO:0099165"}


id: GO:0071286
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a magnesium ion stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to magnesium ion","termid":"GO:0032026"},{"relation_name":"is_a","term_name":"cellular response to metal ion","termid":"GO:0071248"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to magnesium ion","termid":"GO:0071286"}


id: MONDO:0001848
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A form of hypermature cataract formed by liquefaction of the cortex and sinking of the dense nucleus to the bottom of the capsular bag.","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"senile cataract","termid":"MONDO:0004847"},{"relation_name":"is_a","term_name":"hypermature cataract","termid":"MONDO:0045049"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"Morgagni cataract","secondary_identifiers":["MEDGEN:508950","UMLS:C0152258","SCTID:264443002","DOID:13964","ICD9:366.18"],"synonyms":[{"name":"Morgagnian cataract","type":"exact"},{"name":"hypermature cataract","type":"broad"}],"termid":"MONDO:0001848","xrefs":{"Monarch":{"xref_id":"0001848"}}}


id: PBO:0028664
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-loss_of_gross_chromosomal_rearrangement_during_replication_fork_processing","termid":"PBO:0028664"}


id: MONDO:0005134
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autoimmune demyelinating disease of the central nervous system that is produced experimentally in animals by the injection of homogenized brain or spinal cord in Freund's adjuvant. Myelin basic protein appears to be the antigen that elicits the hypersensitivity immune response which is characterized by focal areas of lymphocyte and macrophage infiltration into the brain, associated with demyelination and destruction of the blood-brain barrier. Experimental allergic encephalomyelitis (EAE) is used as an animal model for demyelinating diseases of the human central nervous system such as multiple sclerosis.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"encephalomyelitis","termid":"MONDO:0005156"},{"relation_name":"excluded_subClassOf","term_name":"CNS demyelinating autoimmune disease","termid":"MONDO:0006704"},{"relation_name":"is_a","term_name":"nervous system disorder, non-human animal","termid":"MONDO:1011336"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"experimental autoimmune encephalomyelitis","secondary_identifiers":["MESH:D004681","EFO:0001066"],"termid":"MONDO:0005134","xrefs":{"Monarch":{"xref_id":"0005134"}}}


id: MONDO:0017641
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete miscellaneous movement disorder due to neurodegenerative disease (obsolete MONDO:0017641)","secondary_identifiers":["Orphanet:306695"],"termid":"MONDO:0017641","xrefs":{"Monarch":{"xref_id":"0017641"}}}


id: PBO:0031318
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_sorbitol","termid":"PBO:0031318"}


id: PBO:0088215
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amino acid/polyamine transporter (predicted)","termid":"PBO:0088215"}


id: GO:0044430
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Any constituent part of the cytoskeleton, a cellular scaffolding or skeleton that maintains cell shape, enables some cell motion (using structures such as flagella and cilia), and plays important roles in both intra-cellular transport (e.g. the movement of vesicles and organelles) and cellular division. Includes constituent parts of intermediate filaments, microfilaments, microtubules, and the microtrabecular lattice.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete cytoskeletal part (obsolete GO:0044430)","secondary_identifiers":["NIF_Subcellular:sao1635329413"],"synonyms":[{"name":"cytoskeletal element","type":"exact"},{"name":"cytoskeleton component","type":"exact"}],"termid":"GO:0044430"}


id: PBO:0003933
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oxidised protein hydrolase (predicted)","termid":"PBO:0003933"}


id: PBO:0002550
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-aminoadipate reductase phosphopantetheinyl transferase Lys7","termid":"PBO:0002550"}


id: PR:Q9P7R9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A pre-mRNA-splicing factor SYF1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR11246:SF5","OMA:SCHPO03889","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-mRNA-splicing factor cwf3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC211.02c","secondary_identifiers":["UniProtKB:Q9P7R9"],"synonyms":[{"name":"Spom972h-XAB2","type":"exact"},{"name":"complexed with cdc5 protein 3 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P7R9"}


id: PBO:0004245
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4.1.1.50","termid":"PBO:0004245"}


id: PATO:0001218
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001218 substance_unit (obsolete PATO:0001218)","termid":"PATO:0001218"}


id: PBO:0046285
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EMAP like 3","termid":"PBO:0046285"}


id: PBO:0036007
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_heterochromatin_at_centromere_outer_repeat","termid":"PBO:0036007"}


id: GO:0110089
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the occurrence or rate of cell death by apoptotic process in hippocampal neurons.","definition_xrefs":["GOC:sl","PMID:18940801"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of neuron apoptotic process","termid":"GO:0043523"},{"relation_name":"regulates","term_name":"hippocampal neuron apoptotic process","termid":"GO:0110088"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of hippocampal neuron apoptotic process","termid":"GO:0110089"}


id: PBO:0074560
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA host gene 14","termid":"PBO:0074560"}


id: GO:0008666
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-2,3,4,5-tetrahydrodipicolinate + H2O + succinyl-CoA = L-2-succinylamino-6-oxopimelate + CoA.","definition_xrefs":["EC:2.3.1.117","RHEA:17325"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-succinyltransferase activity","termid":"GO:0016749"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016746","GO:0003824"],"is_obsolete":false,"name":"2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase activity","secondary_identifiers":["KEGG_REACTION:R04365","MetaCyc:TETHYDPICSUCC-RXN"],"synonyms":[{"name":"THDP N-succinyltransferase activity","type":"exact"},{"name":"succinyl-CoA:(S)-2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase activity","type":"related"},{"name":"succinyl-CoA:2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase activity","type":"related"},{"name":"succinyl-CoA:tetrahydrodipicolinate N-succinyltransferase activity","type":"related"},{"name":"tetrahydrodipicolinate N-succinyltransferase activity","type":"related"},{"name":"tetrahydrodipicolinate succinylase activity","type":"related"},{"name":"tetrahydrodipicolinate succinyltransferase activity","type":"related"},{"name":"tetrahydropicolinate succinylase activity","type":"related"}],"termid":"GO:0008666"}


id: GO:1904289
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of mitotic DNA damage checkpoint.","definition_xrefs":["PMID:16549501","GO_REF:0000058","GOC:TermGenie","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mitotic cell cycle","termid":"GO:0007346"},{"relation_name":"is_a","term_name":"regulation of DNA damage checkpoint","termid":"GO:2000001"},{"relation_name":"regulates","term_name":"mitotic DNA damage checkpoint signaling","termid":"GO:0044773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150","GO:0007049"],"is_obsolete":false,"name":"regulation of mitotic DNA damage checkpoint","termid":"GO:1904289"}


id: MONDO:0100077
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A congenital alveolar dysplasia characterized anatomically by a defective and hypoplastic development of pulmonary alveoli that is commonly associated with atelectasis and can be responsible for atelectasis.","definition_xrefs":["PMID:18874463"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital pulmonary veins anomaly","termid":"MONDO:0020295"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"congenital alveolar dysplasia","secondary_identifiers":["UMLS:C0035220","MEDGEN:20539"],"synonyms":[{"name":"CAD","type":"exact"}],"termid":"MONDO:0100077","xrefs":{"Monarch":{"xref_id":"0100077"}}}


id: PBO:0074776
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 3I","termid":"PBO:0074776"}


id: GO:0034189
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a very-low-density lipoprotein particle, a triglyceride-rich lipoprotein particle that is typically composed of APOB100, APOE and APOCs and has a density of about 1.006 g/ml and a diameter of between 20-80 nm.","definition_xrefs":["GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"},{"relation_name":"is_a","term_name":"lipoprotein particle binding","termid":"GO:0071813"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"very-low-density lipoprotein particle binding","synonyms":[{"name":"VLDL binding","type":"exact"},{"name":"very-low-density lipoprotein binding","type":"exact"}],"termid":"GO:0034189"}


id: GO:0010592
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of the formation of a lamellipodium, a thin sheetlike extension of the surface of a migrating cell.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of lamellipodium assembly","termid":"GO:0010591"},{"relation_name":"is_a","term_name":"positive regulation of plasma membrane bounded cell projection assembly","termid":"GO:0120034"},{"relation_name":"is_a","term_name":"positive regulation of lamellipodium organization","termid":"GO:1902745"},{"relation_name":"positively_regulates","term_name":"lamellipodium assembly","termid":"GO:0030032"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"positive regulation of lamellipodium assembly","synonyms":[{"name":"positive regulation of lamellipodium biogenesis","type":"related"}],"termid":"GO:0010592"}


id: GO:1990778
data:
  {"annotated_genes":["SJAG_00144","SJAG_00333","SJAG_02572","SJAG_01516","SJAG_04609","SJAG_04565","SJAG_03915","SJAG_03838","SJAG_02228","SJAG_02831","SJAG_04434","SJAG_04158","SJAG_04930","SJAG_00330","SJAG_00379","SJAG_00279","SJAG_04597","SJAG_03810","SJAG_02583","SJAG_04923","SJAG_01196","SJAG_00858","SJAG_01114","SJAG_03970","SJAG_03029","SJAG_04947","SJAG_03453","SJAG_02392","SJAG_00916","SJAG_04703","SJAG_01809","SJAG_04461","SJAG_02282","SJAG_03602","SJAG_03011","SJAG_00596"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88349],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120207"},{"annotations":[95263,113386,91655,119270,113171,101491],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0099638"},{"annotations":[96080],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061951"},{"annotations":[107415,95514,109174,109957,113388,77981,70591,106787],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043001"},{"annotations":[88447],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0042997"},{"annotations":[94772],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0140325"},{"annotations":[96215],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1903077"},{"annotations":[98788],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0120047"},{"annotations":[107532],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044379"},{"annotations":[91659,114429,116561],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990896"},{"annotations":[104897,100456],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903360"},{"annotations":[105728,91501],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071574"},{"annotations":[111182,119026,92691],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904498"},{"annotations":[91213,90914,115337,65760,68707,101763,89893],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072659"}]},"cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, the cell periphery.","definition_xrefs":["PMID:18216290"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization","termid":"GO:0008104"}],"gene_count":36,"genes_by_uniquename":{"SJAG_00144":null,"SJAG_00279":null,"SJAG_00330":null,"SJAG_00333":null,"SJAG_00379":null,"SJAG_00596":null,"SJAG_00858":null,"SJAG_00916":null,"SJAG_01114":null,"SJAG_01196":null,"SJAG_01516":null,"SJAG_01809":null,"SJAG_02228":null,"SJAG_02282":null,"SJAG_02392":null,"SJAG_02572":null,"SJAG_02583":null,"SJAG_02831":null,"SJAG_03011":null,"SJAG_03029":null,"SJAG_03453":null,"SJAG_03602":null,"SJAG_03810":null,"SJAG_03838":null,"SJAG_03915":null,"SJAG_03970":null,"SJAG_04158":null,"SJAG_04434":null,"SJAG_04461":null,"SJAG_04565":null,"SJAG_04597":null,"SJAG_04609":null,"SJAG_04703":null,"SJAG_04923":null,"SJAG_04930":null,"SJAG_04947":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to cell periphery","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:1990778","terms_by_termid":{"GO:0042997":null,"GO:0043001":null,"GO:0044379":null,"GO:0061951":null,"GO:0071574":null,"GO:0072659":null,"GO:0099638":null,"GO:0120047":null,"GO:0120207":null,"GO:0140325":null,"GO:1903077":null,"GO:1903360":null,"GO:1904498":null,"GO:1990896":null}}


id: GO:1903159
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Any malate transmembrane transporter activity that is involved in malate import into cell.","definition_xrefs":["GOC:dos","GO_REF:0000061","GOC:TermGenie","ISBN:0-8249-3695-6"],"gene_count":0,"genotype_count":0,"name":"obsolete malate transmembrane transporter activity involved in malate import into cell (obsolete GO:1903159)","synonyms":[{"name":"dicarboxylate (succinate/fumarate/malate) antiporter activity involved in malate import into cell","type":"related"},{"name":"malate transmembrane transporter activity involved in malate import into cell","type":"exact"}],"termid":"GO:1903159"}


id: GO:0042580
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A specialised tubular organelle, assembled in hexagonal bundles within an external membrane. Mannosomes are specific to molluscs and are thought to be involved in a general stress reaction.","definition_xrefs":["GOC:jl","PMID:11912051","PMID:9799531"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peroxisome","termid":"GO:0005777"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005777"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005777","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"mannosome","termid":"GO:0042580"}


id: GO:0042118
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The change in morphology and behavior of an endothelial cell resulting from exposure to a cytokine, chemokine, cellular ligand, or soluble factor.","definition_xrefs":["PMID:12851652","PMID:14581484","GOC:mgi_curators","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell activation","termid":"GO:0001775"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"endothelial cell activation","termid":"GO:0042118"}


id: PBO:0000954
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"extended Fer/CIP4 (EFC) domain protein Cdc15","termid":"PBO:0000954"}


id: PBO:0085263
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Permease of basic amino acids in the vacuolar membrane","termid":"PBO:0085263"}


id: GO:0071391
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of stimulus by an estrogen, C18 steroid hormones that can stimulate the development of female sexual characteristics.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to hormone stimulus","termid":"GO:0032870"},{"relation_name":"is_a","term_name":"response to estrogen","termid":"GO:0043627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to estrogen stimulus","synonyms":[{"name":"cellular response to 17alpha-ethynylestradiol","type":"related"},{"name":"cellular response to oestrogen stimulus","type":"exact"}],"termid":"GO:0071391"}


id: PBO:0054343
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1736","termid":"PBO:0054343"}


id: GO:0170051
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A ribonucleoprotein complex containing a small CB-specific RNA (scaRNA), with a short sequence motif (GU/UG wobble stem) for CB localization that is capable of methylation of target RNAs.","definition_xrefs":["PMID:27775477"],"direct_ancestors":[{"relation_name":"is_a","term_name":"box C/D RNP complex","termid":"GO:0170049"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"box C/D methylation guide scaRNP complex","termid":"GO:0170051"}


id: GO:0034662
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that contains ezrin, Na+/H+ exchanger regulatory factor (NHERF, also called EBP50), and two copies of the cystic fibrosis transmembrane conductance regulator (CFTR). The CFTR molecules interact with NHERF via their cytoplasmic tail domains; the complex is thought to link the CFTR channel to the actin cytoskeleton and contribute to the regulation of channel activity.","definition_xrefs":["PMID:16798722","PMID:16129695","PMID:16926444"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005886","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"CFTR-NHERF-ezrin complex","termid":"GO:0034662"}


id: GO:0031160
data:
  {"annotated_genes":["SJAG_05285","SJAG_02131","SJAG_03824","SJAG_02916","SJAG_01321","SJAG_03057","SJAG_03483","SJAG_03013","SJAG_04236","SJAG_04771"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[87978,87979,116199],"is_not":false,"summary":null,"term":"GO:0031160"},{"annotations":[90606,118169,114753,109447,114462],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005619"},{"annotations":[92130],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005631"},{"annotations":[87872],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005632"}]},"cv_name":"cellular_component","definition":"The specialized envelope lying outside the cell membrane of a spore.","definition_xrefs":["GOC:mah","GOC:pg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell wall","termid":"GO:0005618"}],"gene_count":10,"genes_by_uniquename":{"SJAG_01321":null,"SJAG_02131":null,"SJAG_02916":null,"SJAG_03013":null,"SJAG_03057":null,"SJAG_03483":null,"SJAG_03824":null,"SJAG_04236":null,"SJAG_04771":null,"SJAG_05285":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0005618"}],"interesting_parent_ids":["GO:0005618","GO:0005575"],"is_obsolete":false,"name":"spore wall","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"spore coat","type":"exact"}],"termid":"GO:0031160","terms_by_termid":{"GO:0005619":null,"GO:0005631":null,"GO:0005632":null,"GO:0031160":null}}


id: PBO:0066637
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RIMS binding protein 3C","termid":"PBO:0066637"}


id: PBO:0080430
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VPS51 pseudogene 14","termid":"PBO:0080430"}


id: MONDO:0000104
data:
  {"annotated_genes":["SJAG_01007"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85463],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008787"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hypochromic microcytic anemia","termid":"MONDO:0000387"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01007":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002280"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0002280","MONDO:0005570"],"is_obsolete":false,"name":"anemia, hypochromic microcytic with iron overload","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MESH:C567144","MEDGEN:388759","OMIMPS:206100","UMLS:C2673913"],"synonyms":[{"name":"anemia, hypochromic microcytic, with iron overload","type":"exact"}],"termid":"MONDO:0000104","terms_by_termid":{"MONDO:0008787":null},"xrefs":{"Monarch":{"xref_id":"0000104"}}}


id: MONDO:0000857
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A Charcot-Marie-Tooth disease that is characterized by optic atrophy followed by retinitis pigmentosa.","definition_xrefs":["DOID:0080069","PMID:25491489"],"gene_count":0,"genotype_count":0,"name":"obsolete Charcot-Marie-Tooth disease type 7 (obsolete MONDO:0000857)","termid":"MONDO:0000857","xrefs":{"Monarch":{"xref_id":"0000857"}}}


id: PBO:0082495
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Catalytic subunit of 1,3-beta-glucan synthase; involved in formation of the inner layer of the spore wall; activity positively regulated by Rho1p and negatively by Smk1p; GSC2 has a paralog, FKS1, that arose from the whole genome duplication","termid":"PBO:0082495"}


id: MONDO:0010638
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A syndrome characterized by generalized keratosis follicularis, severe proportionate dwarfism and cerebral atrophy. It has been described in six males from one family (three boys and three maternal uncles). Generalized alopecia and microcephaly were also present.","definition_xrefs":["Orphanet:2339"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"skin disorder","termid":"MONDO:0005093"},{"relation_name":"excluded_subClassOf","term_name":"epidermal disease","termid":"MONDO:0019268"},{"relation_name":"excluded_subClassOf","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratosis follicularis-dwarfism-cerebral atrophy syndrome","secondary_identifiers":["MEDGEN:374340","GARD:3099","UMLS:C1839910","OMIM:308830","MESH:C536158"],"synonyms":[{"name":"dwarfism, cerebral atrophy and generalised keratosis follicularis","type":"related"},{"name":"dwarfism, cerebral atrophy and generalized keratosis follicularis","type":"related"},{"name":"keratosis follicularis dwarfism and cerebral atrophy","type":"related"},{"name":"keratosis follicularis, dwarfism, and cerebral atrophy","type":"related"}],"termid":"MONDO:0010638","xrefs":{"Monarch":{"xref_id":"0010638"}}}


id: PBO:0048700
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyoxalase domain containing 4","termid":"PBO:0048700"}


id: PBO:0038948
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acireductone dioxygenase 1 pseudogene 3","termid":"PBO:0038948"}


id: GO:0004139
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-deoxy-D-ribose 5-phosphate = D-glyceraldehyde 3-phosphate + acetaldehyde.","definition_xrefs":["RHEA:12821","EC:4.1.2.4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde-lyase activity","termid":"GO:0016832"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"deoxyribose-phosphate aldolase activity","secondary_identifiers":["Reactome:R-HSA-6787321","KEGG_REACTION:R01066","MetaCyc:DEOXYRIBOSE-P-ALD-RXN"],"synonyms":[{"name":"2-deoxy-D-ribose-5-phosphate acetaldehyde-lyase (D-glyceraldehyde-3-phosphate-forming)","type":"related"},{"name":"2-deoxy-D-ribose-5-phosphate acetaldehyde-lyase activity","type":"related"},{"name":"2-deoxyribose-5-phosphate aldolase activity","type":"related"},{"name":"deoxyriboaldolase activity","type":"related"},{"name":"deoxyribose-5-phosphate aldolase activity","type":"related"},{"name":"phosphodeoxyriboaldolase activity","type":"related"}],"termid":"GO:0004139"}


id: RO:0002291
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"x is ubiquitously expressed in y if and only if x is expressed in y, and the majority of cells in y express x","direct_ancestors":[{"relation_name":"is_a","term_name":"expressed_in","termid":"RO:0002206"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitously_expressed_in","termid":"RO:0002291"}


id: GO:0018043
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of a C-terminal peptidyl-isoleucine amide by hydrolysis and oxidation of an interior Ile-Gly peptide in a secreted protein.","definition_xrefs":["RESID:AA0090"],"gene_count":0,"genotype_count":0,"name":"obsolete C-terminal peptidyl-isoleucine amidation (obsolete GO:0018043)","termid":"GO:0018043"}


id: GO:0005516
data:
  {"annotated_genes":["SJAG_03631","SJAG_02858","SJAG_02249","SJAG_04498"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73698,75559,77799,79880],"is_not":false,"summary":null,"term":"GO:0005516"}]},"cv_name":"molecular_function","definition":"Binding to calmodulin, a calcium-binding protein with many roles, both in the calcium-bound and calcium-free states.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":4,"genes_by_uniquename":{"SJAG_02249":null,"SJAG_02858":null,"SJAG_03631":null,"SJAG_04498":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"calmodulin binding","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-202110"],"termid":"GO:0005516","terms_by_termid":{"GO:0005516":null}}


id: PBO:0061336
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear pore complex interacting protein family member B14, pseudogene","termid":"PBO:0061336"}


id: PBO:0059163
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mercaptopyruvate sulfurtransferase","termid":"PBO:0059163"}


id: GO:0090343
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that increases the rate, frequency, or extent of cell aging. Cell aging is the progression of the cell from its inception to the end of its lifespan.","definition_xrefs":["GOC:BHF","GOC:tb","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of cell aging (obsolete GO:0090343)","termid":"GO:0090343"}


id: PR:Q9USJ4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- nte1 gene.","definition_xrefs":["UniProtKB:Q9USJ4","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysophospholipase NTE1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC4B3.04c","synonyms":[{"name":"Spom972h-nte1","type":"exact"},{"name":"intracellular phospholipase B (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"neuropathy target esterase homolog (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9USJ4"}


id: FYPO:0007522
data:
  {"alleles_by_uniquename":{"SJAG_01787:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01787","name":"pck1delta","uniquename":"SJAG_01787:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[119807],"is_not":false,"summary":null,"term":"FYPO:0007522"}]},"cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to a combination of tacrolimus and magnesium chloride. Cells stop growing (and may die) at concentrations of tacrolimus and magnesium chloride that allow wild type cells to grow.","definition_xrefs":["PomBase:mah","PMID:19625445"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01787":null},"genotype_count":1,"genotypes_by_uniquename":{"pck1delta":{"display_name":"pck1delta","display_uniquename":"pck1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01787:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0000139","FYPO:0001985","FYPO:0002683","FYPO:0005447"],"is_obsolete":false,"name":"sensitive to tacrolimus and magnesium chloride","references_by_uniquename":{"PMID:34198697":null},"single_locus_annotated_genes":["SJAG_01787"],"single_locus_genotype_uniquenames":["pck1delta"],"synonyms":[{"name":"inviable in the presence of FK506 and chloride","type":"exact"},{"name":"sensitive to FK506 and magnesium chloride","type":"exact"},{"name":"sensitive to magnesium chloride and FK506","type":"exact"},{"name":"sensitive to magnesium chloride and tacrolimus","type":"exact"},{"name":"sensitive to tacrolimus and MgCl2","type":"exact"},{"name":"sensitive to tacrolimus and magnesium chloride during mitotic cell cycle","type":"related"},{"name":"sensitive to tacrolimus and magnesium chloride during vegetative growth","type":"exact"},{"name":"vic-negative","type":"related"}],"termid":"FYPO:0007522","terms_by_termid":{"FYPO:0007522":null,"FYPO_EXT:0000001":null}}


id: MONDO:0020364
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Posterior polymorphous corneal dystrophy (PPCD) is a rare mild subtype of posterior corneal dystrophy characterized by small aggregates of apparent vesicles bordered by a gray haze at the level of Descemet membrane, generally with no effect on vision.","definition_xrefs":["Orphanet:98973"],"direct_ancestors":[{"relation_name":"is_a","term_name":"corneal endothelial dystrophy","termid":"MONDO:0000766"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"posterior corneal dystrophy","termid":"MONDO:0020214"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"posterior polymorphous corneal dystrophy","secondary_identifiers":["MEDGEN:87382","UMLS:C0339284","DOID:0060457","OMIMPS:122000","icd11.foundation:935421185","GARD:16882"],"synonyms":[{"name":"PPCD","type":"exact"},{"name":"Schlichting dystrophy","type":"exact"},{"name":"corneal dystrophy, posterior polymorphous","type":"exact"},{"name":"hereditary polymorphus posterior corneal dystrophy","type":"exact"},{"name":"posterior polymorphous dystrophy","type":"exact"}],"termid":"MONDO:0020364","xrefs":{"Monarch":{"xref_id":"0020364"}}}


id: PBO:0014613
data:
  {"annotation_feature_type":"gene","cv_name":"species_dist","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved in Schizosaccharomyces","termid":"PBO:0014613"}


id: PBO:0038540
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ABHD14A-ACY1 readthrough","termid":"PBO:0038540"}


id: MONDO:0006332
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete ovarian choriocarcinoma (obsolete MONDO:0006332)","termid":"MONDO:0006332","xrefs":{"Monarch":{"xref_id":"0006332"}}}


id: PBO:0060000
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4L pseudogene 20","termid":"PBO:0060000"}


id: MONDO:0002387
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant vascular neoplasm arising from the liver.","definition_xrefs":["NCIT:C4438"],"direct_ancestors":[{"relation_name":"is_a","term_name":"liver sarcoma","termid":"MONDO:0002397"},{"relation_name":"is_a","term_name":"hepatic vascular disorder","termid":"MONDO:0002405"},{"relation_name":"is_a","term_name":"angiosarcoma","termid":"MONDO:0016982"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"}],"interesting_parent_ids":["MONDO:0002515","MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"liver angiosarcoma","secondary_identifiers":["UMLS:C0345907","ONCOTREE:LIAS","ICDO:9124/3","ICD10CM:C22.3","GARD:5813","SCTID:109844006","DOID:268","MEDGEN:138027"],"synonyms":[{"name":"Lias","type":"related"},{"name":"angiosarcoma (disease) of liver","type":"exact"},{"name":"angiosarcoma of liver","type":"exact"},{"name":"angiosarcoma of the liver","type":"exact"},{"name":"hemangiosarcoma of liver","type":"exact"},{"name":"hemangiosarcoma of the liver","type":"exact"},{"name":"hepatic angiosarcoma","type":"exact"},{"name":"hepatic hemangiosarcoma","type":"exact"},{"name":"liver angiosarcoma","type":"exact"},{"name":"liver angiosarcoma (disease)","type":"exact"},{"name":"liver hemangiosarcoma","type":"exact"},{"name":"primary angiosarcoma of liver","type":"exact"},{"name":"primary angiosarcoma of the liver","type":"exact"}],"termid":"MONDO:0002387","xrefs":{"Monarch":{"xref_id":"0002387"}}}


id: PBO:0113262
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phosphatidic acid (PA)-binding nuclear envelope (NE)-specific ESCRT; homolog of human CHMP7, localizes to the endoplasmic reticulum presumably as part of ESCRT-III like complex","termid":"PBO:0113262"}


id: FYPO:0004539
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a cell contains more, and shorter, cytoplasmic microtubules than normal during interphase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubules present in increased numbers","termid":"FYPO:0004538"},{"relation_name":"is_a","term_name":"short interphase microtubules","termid":"FYPO:0006103"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0002399","FYPO:0001320","FYPO:0000002","FYPO:0000054","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"short interphase microtubules present in increased numbers","synonyms":[{"name":"broken interphase microtubules","type":"related"},{"name":"short cytoplasmic microtubules present in increased numbers during interphase of mitotic cell cycle","type":"exact"},{"name":"short cytoplasmic microtubules present in increased numbers during mitotic interphase","type":"exact"},{"name":"short fragmented interphase microtubules","type":"related"},{"name":"short interphase cytoplasmic microtubules present in increased numbers","type":"exact"},{"name":"short interphase microtubules present in greater numbers","type":"exact"},{"name":"short interphase microtubules present in increased numbers during vegetative growth","type":"exact"}],"termid":"FYPO:0004539"}


id: PBO:0049672
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-hydroxyacyl-CoA dehydratase 4","termid":"PBO:0049672"}


id: GO:0070656
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Differentiation of new mechanoreceptors to replace those lost or destroyed by injury.","definition_xrefs":["PMID:19381250","GOC:dsf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mechanoreceptor differentiation","termid":"GO:0042490"},{"relation_name":"part_of","term_name":"mechanosensory epithelium regeneration","termid":"GO:0070655"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mechanoreceptor differentiation involved in mechanosensory epithelium regeneration","termid":"GO:0070656"}


id: MONDO:1010812
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Polydactyly that occurs in domestic cat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polydactyly, non-human animal","termid":"MONDO:1010158"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polydactyly, domestic cat","secondary_identifiers":["OMIA:000810-9685"],"termid":"MONDO:1010812","xrefs":{"Monarch":{"xref_id":"1010812"}}}


id: PBO:0068746
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U5E small nuclear 1","termid":"PBO:0068746"}


id: PBO:0029136
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_cordycepin","termid":"PBO:0029136"}


id: PBO:0080554
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WBP1 pseudogene 1","termid":"PBO:0080554"}


id: GO:2000903
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a cellooligosaccharide.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligosaccharide catabolic process","termid":"GO:0009313"},{"relation_name":"is_a","term_name":"cellooligosaccharide metabolic process","termid":"GO:2000902"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"cellooligosaccharide catabolic process","synonyms":[{"name":"cellooligosaccharide catabolism","type":"exact"}],"termid":"GO:2000903"}


id: MONDO:0021098
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Glandular or squamous cell neoplastic proliferations characterized by the formation of multiple papillary structures diffusely involving a specific anatomic site.","definition_xrefs":["NCIT:C3713"],"direct_ancestors":[{"relation_name":"is_a","term_name":"papillary epithelial neoplasm","termid":"MONDO:0021096"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"papillomatosis","secondary_identifiers":["MEDGEN:64459","UMLS:C0205875"],"synonyms":[{"name":"papillomatosis","type":"exact"}],"termid":"MONDO:0021098","xrefs":{"Monarch":{"xref_id":"0021098"}}}


id: PBO:0027098
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_number_of_Rad52_foci_at_rDNA_replication_origins","termid":"PBO:0027098"}


id: PBO:0090847
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi UDP-galactose transmembrane transporter Gms1","termid":"PBO:0090847"}


id: PR:Q09142
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An origin recognition complex subunit 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR14052:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"origin recognition complex subunit 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC685.09","secondary_identifiers":["UniProtKB:Q09142"],"synonyms":[{"name":"SPBC685.09","type":"related"},{"name":"Spom972h-ORC2","type":"exact"},{"name":"orp2","type":"related"}],"termid":"PR:Q09142"}


id: PBO:0061494
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neural retina leucine zipper","termid":"PBO:0061494"}


id: GO:0006932
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The translocation of the cell body forward during cell migration, mediated by tractional force on its substrate and tension in the cortical cytoskeleton. Adhesions transmit propulsive forces and serve as traction points over which the cell moves.","definition_xrefs":["PMID:14657486","PMID:11944043","ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic actin-based contraction involved in cell motility","termid":"GO:0060327"},{"relation_name":"part_of","term_name":"ameboidal-type cell migration","termid":"GO:0001667"},{"relation_name":"part_of","term_name":"substrate-dependent cell migration","termid":"GO:0006929"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"substrate-dependent cell migration, cell contraction","synonyms":[{"name":"substrate-bound cell migration, cell contraction","type":"exact"}],"termid":"GO:0006932"}


id: PBO:0086771
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; sporulation is abnormal in homozygous diploid; SWAT-GFP fusion protein localizes to the nucleus; YOR268C is not an essential gene","termid":"PBO:0086771"}


id: PBO:0034675
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_monoacylglycerol_phosphate_chain_length","termid":"PBO:0034675"}


id: MONDO:0044239
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete median-ulnar nerve communications (obsolete MONDO:0044239)","secondary_identifiers":["OMIM:155150"],"synonyms":[{"name":"Martin-Gruber Median-ulnar anastomosis","type":"related"},{"name":"median-ulnar nerve communications","type":"related"}],"termid":"MONDO:0044239","xrefs":{"Monarch":{"xref_id":"0044239"}}}


id: FYPO:0002445
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a protein that is not normally found in actin cortical patches is observed there.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mislocalized protein during vegetative growth","termid":"FYPO:0000782"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000138","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"protein mislocalized to actin cortical patch","synonyms":[{"name":"ectopic protein localization to actin cortical patch","type":"exact"},{"name":"protein mislocalised to actin cortical patch","type":"exact"},{"name":"protein mislocalised to actin cortical patch during vegetative growth","type":"exact"},{"name":"protein mislocalized to F-actin patch","type":"exact"},{"name":"protein mislocalized to actin cortical patch during mitotic cell cycle","type":"related"},{"name":"protein mislocalized to actin cortical patch during vegetative growth","type":"exact"},{"name":"protein mislocalized to actin patch","type":"exact"}],"termid":"FYPO:0002445"}


id: GO:0042351
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of GDP-L-fucose from GDP-D-mannose via GDP-4-dehydro-6-deoxy-D-mannose, requiring the functions of GDP-mannose 4,6-dehydratase (EC:4.2.1.47) and GDP-L-fucose synthase (EC:1.1.1.271).","definition_xrefs":["PMID:11030750"],"direct_ancestors":[{"relation_name":"is_a","term_name":"GDP-mannose metabolic process","termid":"GO:0019673"},{"relation_name":"is_a","term_name":"GDP-L-fucose biosynthetic process","termid":"GO:0042350"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"'de novo' GDP-L-fucose biosynthetic process","secondary_identifiers":["MetaCyc:PWY-66"],"synonyms":[{"name":"'de novo' GDP-L-fucose anabolism","type":"exact"},{"name":"'de novo' GDP-L-fucose biosynthesis","type":"exact"},{"name":"'de novo' GDP-L-fucose formation","type":"exact"},{"name":"'de novo' GDP-L-fucose synthesis","type":"exact"},{"name":"GDP-L-fucose biosynthesis, de novo pathway","type":"exact"},{"name":"GDP-L-fucose biosynthetic process, de novo pathway","type":"exact"}],"termid":"GO:0042351"}


id: MONDO:0015390
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Proboscis lateralis (PL) is a rare congenital facial abnormality characterized by failed development of the external nose on one side that is replaced by a tubular structure composed of skin and soft tissue usually attached at the inner canthus of the eye and therefore often associated with maldevelopment of the nasal cavity or paranasal sinuses of the affected side. PL is also associated with other craniofacial abnormalities such as orbital anomalies, cleft lip/palate, frontal encephalocele and holoprosencephaly.","definition_xrefs":["Orphanet:141099"],"direct_ancestors":[{"relation_name":"is_a","term_name":"otorhinolaryngologic disease","termid":"MONDO:0024623"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proboscis lateralis","secondary_identifiers":["GARD:19947","icd11.foundation:646148612","UMLS:C4274985","MEDGEN:900031","SCTID:715828006"],"synonyms":[{"name":"congenital tubular nose","type":"exact"}],"termid":"MONDO:0015390","xrefs":{"Monarch":{"xref_id":"0015390"}}}


id: _global:has_end_location
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"x 'has end location' y if and only if there exists some process z such that x 'ends with' z and z 'occurs in' y","direct_ancestors":[{"relation_name":"is_a","term_name":"go_annotation_extension_relation","termid":"_global:go_annotation_extension_relation"},{"relation_name":"is_a","term_name":"has_part_that_occurs_in","termid":"_global:has_part_that_occurs_in"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_end_location","secondary_identifiers":["RO:0002232"],"termid":"_global:has_end_location"}


id: PR:000027570
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A fungal histone H3.1 that is encoded in the genome of Schizosaccharomyces pombe.","definition_xrefs":["PomBase:MAH","PMID:20929775","PMID:11242054"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fungal histone H3.1","termid":"PR:000027569"},{"relation_name":"is_a","term_name":"core histone (Schizosaccharomyces pombe)","termid":"PR:000041293"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H3.1 (Schizosaccharomyces pombe)","pombase_gene_id":"SPAC1834.04","synonyms":[{"name":"SPAC1834.04","type":"related"},{"name":"Spom-hht1","type":"exact"}],"termid":"PR:000027570"}


id: PR:P0CT35
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- Tf2-2 gene.","definition_xrefs":["UniProtKB:P0CT35","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transposon Tf2-2 polyprotein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC167.08","synonyms":[{"name":"Spom972h-Tf2-2","type":"exact"},{"name":"retrotransposable element Tf2 155 kDa protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P0CT35"}


id: PBO:0087108
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal protein P2 alpha; a component of the ribosomal stalk, which is involved in the interaction between translational elongation factors and the ribosome; free (non-ribosomal) P2 stimulates the phosphorylation of the eIF2 alpha subunit (Sui2p) by Gcn2p; regulates the accumulation of P1 (Rpp1Ap and Rpp1Bp) in the cytoplasm","termid":"PBO:0087108"}


id: GO:1901157
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of neomycin.","definition_xrefs":["GOC:TermGenie","GOC:yaf","MetaCyc:PWY-7016","UniPathway:UPA00969"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoglycoside antibiotic catabolic process","termid":"GO:0030649"},{"relation_name":"is_a","term_name":"polyol catabolic process","termid":"GO:0046174"},{"relation_name":"is_a","term_name":"neomycin metabolic process","termid":"GO:1901156"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"neomycin catabolic process","synonyms":[{"name":"neomycin breakdown","type":"exact"},{"name":"neomycin catabolism","type":"exact"},{"name":"neomycin degradation","type":"exact"}],"termid":"GO:1901157"}


id: PBO:0086590
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; exhibits homology to C-terminal end of Bul1p; expressed as a readthrough product of BSC5, the readthrough locus being termed BUL3; the BUL3 readthrough product is involved in ubiquitin-mediated sorting of plasma membrane proteins and interacts with WW domains of Rsp5p in vitro, but in a functionally different way than the non-readthrough form","termid":"PBO:0086590"}


id: GO:0019655
data:
  {"annotated_genes":["SJAG_05006","SJAG_03743","SJAG_03822","SJAG_03370","SJAG_00240","SJAG_01414"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[88866,99088,99089,114997,114998],"is_not":false,"summary":null,"term":"GO:0019655"},{"annotations":[96936],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:2001172"}]},"cv_name":"biological_process","definition":"The anaerobic chemical reactions and pathways resulting in the breakdown of glucose; it is converted into ethanol and carbon dioxide (CO2), producing two molecules of ATP for each molecule of glucose.","definition_xrefs":["GOC:nr","ISBN:0716720094","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucose metabolic process","termid":"GO:0006006"},{"relation_name":"is_a","term_name":"ethanol metabolic process","termid":"GO:0006067"},{"relation_name":"is_a","term_name":"glycolytic fermentation","termid":"GO:0019660"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00240":null,"SJAG_01414":null,"SJAG_03370":null,"SJAG_03743":null,"SJAG_03822":null,"SJAG_05006":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0006091","GO:0044281","GO:0005975"],"is_obsolete":false,"name":"glycolytic fermentation to ethanol","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:Ethanol_fermentation","GO:0043458"],"synonyms":[{"name":"alcoholic fermentation","type":"related"},{"name":"ethanol anabolism during fermentation","type":"related"},{"name":"ethanol biosynthetic process involved in glucose fermentation to ethanol","type":"related"},{"name":"ethanol fermentation","type":"exact"},{"name":"ethanol formation during fermentation","type":"related"},{"name":"ethanol synthesis during fermentation","type":"related"},{"name":"glucose catabolic process to ethanol","type":"exact"},{"name":"glucose fermentation to ethanol","type":"exact"}],"termid":"GO:0019655","terms_by_termid":{"GO:0019655":null,"GO:2001172":null}}


id: SO:0000590
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The signal recognition particle (SRP) is a universally conserved ribonucleoprotein. It is involved in the co-translational targeting of proteins to membranes. The eukaryotic SRP consists of a 300-nucleotide 7S RNA and six proteins: SRPs 72, 68, 54, 19, 14, and 9. Archaeal SRP consists of a 7S RNA and homologues of the eukaryotic SRP19 and SRP54 proteins. In most eubacteria, the SRP consists of a 4.5S RNA and the Ffh protein (a homologue of the eukaryotic SRP54 protein). Eukaryotic and archaeal 7S RNAs have very similar secondary structures, with eight helical elements. These fold into the Alu and S domains, separated by a long linker region. Eubacterial SRP is generally a simpler structure, with the M domain of Ffh bound to a region of the 4.5S RNA that corresponds to helix 8 of the eukaryotic and archaeal SRP S domain. Some Gram-positive bacteria (e.g. Bacillus subtilis), however, have a larger SRP RNA that also has an Alu domain. The Alu domain is thought to mediate the peptide chain elongation retardation function of the SRP. The universally conserved helix which interacts with the SRP54/Ffh M domain mediates signal sequence recognition. In eukaryotes and archaea, the SRP19-helix 6 complex is thought to be involved in SRP assembly and stabilizes helix 8 for SRP54 binding.","direct_ancestors":[{"relation_name":"derives_from","term_name":"SRP_RNA_primary_transcript","termid":"SO:0000589"},{"relation_name":"is_a","term_name":"ncRNA","termid":"SO:0000655"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SRP_RNA","synonyms":[{"name":"7S RNA","type":"related"},{"name":"INSDC_feature:ncRNA","type":"broad"},{"name":"INSDC_qualifier:SRP_RNA","type":"exact"},{"name":"SRP RNA","type":"exact"},{"name":"signal recognition particle RNA","type":"related"}],"termid":"SO:0000590"}


id: PBO:0069350
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 610, pseudogene","termid":"PBO:0069350"}


id: MONDO:0020804
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma involving the basal cells.","definition_xrefs":["NCIT:C156767"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carcinoma","termid":"MONDO:0004993"},{"relation_name":"is_a","term_name":"basal cell neoplasm","termid":"MONDO:0020799"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"basal cell carcinoma","secondary_identifiers":["MESH:D002280","NCIT:C7586","EFO:0004193","MEDGEN:2870","UMLS:C0007117"],"synonyms":[{"name":"basal cell cancer","type":"exact"},{"name":"epithelioma, basal cell","type":"exact"},{"name":"malignant basal cell neoplasm","type":"exact"}],"termid":"MONDO:0020804","xrefs":{"Monarch":{"xref_id":"0020804"}}}


id: FYPO:0000514
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which nuclear import does not occur. Nuclear import is the directed movement of any substance into the nucleus; import of all substances or a specific substance may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal nuclear import","termid":"FYPO:0001217"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"abolished nuclear import","synonyms":[{"name":"abolished nuclear import during mitotic cell cycle","type":"related"},{"name":"absent nuclear import","type":"exact"},{"name":"nuclear import abolished","type":"exact"},{"name":"nuclear import abolished during vegetative growth","type":"exact"},{"name":"nuclear import: absent","type":"related"}],"termid":"FYPO:0000514"}


id: MONDO:0021059
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Any disease or disorder affecting the head and/or neck region.","gene_count":0,"genotype_count":0,"name":"obsolete head or neck disorder/disorder (obsolete MONDO:0021059)","secondary_identifiers":["NCIT:C27571"],"synonyms":[{"name":"craniocervical region disease","type":"exact"},{"name":"craniocervical region disease or disorder","type":"exact"},{"name":"disease of craniocervical region","type":"exact"},{"name":"disease or disorder of craniocervical region","type":"exact"},{"name":"disorder of craniocervical region","type":"exact"},{"name":"head and neck disorder","type":"exact"},{"name":"head or neck disorder","type":"exact"}],"termid":"MONDO:0021059","xrefs":{"Monarch":{"xref_id":"0021059"}}}


id: PBO:0050057
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major histocompatibility complex, class I, X (pseudogene)","termid":"PBO:0050057"}


id: PBO:0058530
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6075","termid":"PBO:0058530"}


id: FYPO:0001393
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype observed in the vegetative growth phase of the life cycle in which the activation of monopolar cell growth, i.e. the initiation of growth at the old end of a cell following cell division, is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal regulation of cell growth","termid":"FYPO:0001392"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"abnormal activation of monopolar cell growth","synonyms":[{"name":"abnormal regulation of monopolar vegetative cell growth","type":"related"}],"termid":"FYPO:0001393"}


id: GO:0046834
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of introducing one or more phosphate groups into a lipid, any member of a group of substances soluble in lipid solvents but only sparingly soluble in aqueous solvents.","definition_xrefs":["ISBN:0198506732","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphorylation","termid":"GO:0016310"},{"relation_name":"is_a","term_name":"lipid modification","termid":"GO:0030258"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"lipid phosphorylation","termid":"GO:0046834"}


id: PBO:0038483
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP binding cassette subfamily B member 8","termid":"PBO:0038483"}


id: GO:0043919
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: agmatine + S-adenosyl 3-(methylsulfanyl)propylamine = H+ + N1-(3-aminopropyl)agmatine + S-methyl-5'-thioadenosine.","definition_xrefs":["RHEA:36487","PMID:15983049"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring alkyl or aryl (other than methyl) groups","termid":"GO:0016765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016765"}],"interesting_parent_ids":["GO:0003824","GO:0016765","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"agmatine aminopropyltransferase activity","synonyms":[{"name":"agmatine aminopropyl transferase activity","type":"exact"}],"termid":"GO:0043919"}


id: GO:0038010
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which the internalization of a signaling receptor activates or increases the frequency, rate or extent of signal transduction. Receptor internalization can enhance signaling by concentrating signaling molecules in one location, or by moving a ligand-activated receptor to the location of downstream signaling proteins. Endosomes for example can serve as important intracellular signaling platforms.","definition_xrefs":["GOC:bf","PMID:19696798","PMID:17908284","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of signal transduction","termid":"GO:0009967"},{"relation_name":"is_a","term_name":"regulation of signal transduction by receptor internalization","termid":"GO:0038009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0023052","GO:0016192","GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"positive regulation of signal transduction by receptor internalization","synonyms":[{"name":"positive regulation of signaling pathway by receptor endocytosis","type":"exact"}],"termid":"GO:0038010"}


id: GO:0140124
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of Lewy body formation.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of inclusion body assembly","termid":"GO:0090261"},{"relation_name":"is_a","term_name":"regulation of Lewy body formation","termid":"GO:0140122"},{"relation_name":"positively_regulates","term_name":"Lewy body formation","termid":"GO:0140121"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"positive regulation of Lewy body formation","termid":"GO:0140124"}


id: PBO:0075742
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal recognition particle 68 pseudogene 1","termid":"PBO:0075742"}


id: PBO:0063267
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin beta 13","termid":"PBO:0063267"}


id: PBO:0086763
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; S288C contains an in-frame stop codon between ORFs YLR030W and YLR031W; YLR031W has a paralog, YMR124W, that arose from the whole genome duplication","termid":"PBO:0086763"}


id: GO:0034916
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2-methylhexanoyl-CoA = 2-methylhex-2-enoyl-CoA + 2 H+ + e-.","definition_xrefs":["UM-BBD_reactionID:r0928"],"gene_count":0,"genotype_count":0,"name":"obsolete 2-methylhexanoyl-CoA dehydrogenase activity (obsolete GO:0034916)","termid":"GO:0034916"}


id: PBO:0084475
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mating pheromone a-factor; made by a cells; interacts with alpha cells to induce cell cycle arrest and other responses leading to mating; biogenesis involves C-terminal modification, N-terminal proteolysis, and export; also encoded by MFA2","termid":"PBO:0084475"}


id: PBO:0073621
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sialic acid binding Ig like lectin 7","termid":"PBO:0073621"}


id: MONDO:0008958
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any isolated Klippel-Feil syndrome in which the cause of the disease is a mutation in the MEOX1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Klippel-Feil syndrome","termid":"MONDO:0001029"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Klippel-Feil syndrome 2, autosomal recessive","secondary_identifiers":["GARD:15151","MEDGEN:395201","MESH:C536888","OMIM:214300","UMLS:C1859209","DOID:0080590"],"synonyms":[{"name":"KFS2","type":"related"},{"name":"Kfs, autosomal recessive","type":"related"},{"name":"Klippel-FEIL syndrome 2, autosomal recessive","type":"related"},{"name":"Klippel-Feil syndrome 2, autosomal recessive","type":"exact"},{"name":"MEOX1 isolated Klippel-Feil syndrome","type":"exact"},{"name":"cervical vertebral fusion, autosomal recessive","type":"related"},{"name":"isolated Klippel-Feil syndrome caused by mutation in MEOX1","type":"exact"}],"termid":"MONDO:0008958","xrefs":{"Monarch":{"xref_id":"0008958"}}}


id: PBO:0040448
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP10A divergent transcript","termid":"PBO:0040448"}


id: PBO:0047454
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FCH and double SH3 domains 1","termid":"PBO:0047454"}


id: PR:O60071
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- enp1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O60071"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C13G1.09 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC13G1.09","synonyms":[{"name":"Spom972h-enp1","type":"exact"}],"termid":"PR:O60071"}


id: GO:0015203
data:
  {"annotated_genes":["SJAG_02125","SJAG_02060","SJAG_02059","SJAG_02344"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[71029],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015489"},{"annotations":[111319,71030,117733],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015606"},{"annotations":[111320,117734,80094],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000297"}]},"cv_name":"molecular_function","definition":"Enables the transfer of polyamines, organic compounds containing two or more amino groups, from one side of a membrane to the other.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transporter activity","termid":"GO:0022857"}],"gene_count":4,"genes_by_uniquename":{"SJAG_02059":null,"SJAG_02060":null,"SJAG_02125":null,"SJAG_02344":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"polyamine transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"amine/amide/polyamine channel activity","type":"related"}],"termid":"GO:0015203","terms_by_termid":{"GO:0000297":null,"GO:0015489":null,"GO:0015606":null}}


id: GO:2000020
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of male gonad development.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of gonad development","termid":"GO:1905941"},{"relation_name":"is_a","term_name":"regulation of male gonad development","termid":"GO:2000018"},{"relation_name":"positively_regulates","term_name":"male gonad development","termid":"GO:0008584"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of male gonad development","synonyms":[{"name":"positive regulation of testicular development","type":"exact"},{"name":"positive regulation of testis development","type":"exact"}],"termid":"GO:2000020"}


id: FYPO:0004826
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the number of ribosomal DNA (rDNA) repeats present in the rDNA arrays on chromosome III is significantly lower than the range in wild type cells, and continues to decrease over successive meiotic generations (i.e. cycles of mating, meiosis, sporulation, spore germination and vegetative growth).","definition_xrefs":["PomBase:mah","PMID:25417108"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal rDNA copy number","termid":"FYPO:0004823"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"progressively decreasing rDNA copy number during successive meiotic generations","synonyms":[{"name":"progressively decreasing rDNA copy number over successive meiotic generations","type":"exact"},{"name":"progressively decreasing ribosomal DNA copy number during successive meiotic generations","type":"exact"},{"name":"progressively shortening rDNA through meiotic generations","type":"related"}],"termid":"FYPO:0004826"}


id: MONDO:0800365
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"peroxisome biogenesis disorder due to PEX14 defect","termid":"MONDO:0100268"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0019053"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0005244","MONDO:0019053","MONDO:0006025","MONDO:0005066"],"is_obsolete":false,"name":"peroxisome biogenesis disorder, complementation group K","secondary_identifiers":["UMLS:C1866257","MEDGEN:356487"],"synonyms":[{"name":"CGK","type":"exact"}],"termid":"MONDO:0800365","xrefs":{"Monarch":{"xref_id":"0800365"}}}


id: GO:0006703
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of estrogens, C18 steroid hormones that can stimulate the development of female sexual characteristics. Also found in plants.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"estrogen metabolic process","termid":"GO:0008210"},{"relation_name":"is_a","term_name":"hormone biosynthetic process","termid":"GO:0042446"},{"relation_name":"is_a","term_name":"steroid hormone biosynthetic process","termid":"GO:0120178"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"estrogen biosynthetic process","secondary_identifiers":["Reactome:R-HSA-193144"],"synonyms":[{"name":"estrogen anabolism","type":"exact"},{"name":"estrogen biosynthesis","type":"exact"},{"name":"estrogen formation","type":"exact"},{"name":"estrogen synthesis","type":"exact"},{"name":"oestrogen biosynthesis","type":"exact"},{"name":"oestrogen biosynthetic process","type":"exact"}],"termid":"GO:0006703"}


id: PBO:0040886
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bone morphogenetic protein 8b","termid":"PBO:0040886"}


id: PBO:0058881
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 10397","termid":"PBO:0058881"}


id: PBO:0066352
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"reticulocalbin 1","termid":"PBO:0066352"}


id: GO:0160070
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A homeostatic process involved in the maintenance of a steady state level of tetrahydroxoborate within a cell.","definition_xrefs":["PMID:15525507"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular chemical homeostasis","termid":"GO:0055082"},{"relation_name":"is_a","term_name":"inorganic ion homeostasis","termid":"GO:0098771"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098771"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0098771","GO:0008150"],"is_obsolete":false,"name":"intracellular borate homeostasis","synonyms":[{"name":"intracellular boron homeostasis","type":"exact"},{"name":"intracellular tetrahydroxoborate homeostasis","type":"exact"}],"termid":"GO:0160070"}


id: MONDO:0016900
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete partial deletion of the long arm of chromosome 1 (obsolete MONDO:0016900)","termid":"MONDO:0016900","xrefs":{"Monarch":{"xref_id":"0016900"}}}


id: PR:Q9Y7K8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A Nogo-B receptor that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03491","PANTHER:PTHR21528:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dehydrodolichyl diphosphate syntase complex subunit nus1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC2A9.06c","secondary_identifiers":["UniProtKB:Q9Y7K8"],"synonyms":[{"name":"Spom972h-NUS1","type":"exact"},{"name":"UDS (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"di-trans,poly-cis-decaprenylcistransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"undecaprenyl diphosphate synthase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9Y7K8"}


id: GO:0070994
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which a stimulus indicating oxidative stress is received and converted into a molecular signal.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to oxidative stress","termid":"GO:0006979"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of oxidative stress","termid":"GO:0070994"}


id: PBO:0085815
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; expressed at both mRNA and protein levels; partially overlaps HMS2","termid":"PBO:0085815"}


id: MONDO:1010628
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Chediak-Higashi syndrome that occurs in Arctic fox.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Chediak-Higashi syndrome, non-human animal","termid":"MONDO:1010070"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Chediak-Higashi syndrome, Arctic fox","secondary_identifiers":["OMIA:000185-494514"],"termid":"MONDO:1010628","xrefs":{"Monarch":{"xref_id":"1010628"}}}


id: GO:0071972
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 a peptidoglycan dimer (tetrapeptide) + 3 H2O = a peptidoglycan tetramer with L,D cross-links (L-Lys-D-Asn-L-Lys) + di-trans,poly-cis-undecaprenyl diphosphate + 4 D-alanine.","definition_xrefs":["MetaCyc:RXN-11349"],"direct_ancestors":[{"relation_name":"is_a","term_name":"serine-type carboxypeptidase activity","termid":"GO:0004185"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0008233"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0008233","GO:0003824","GO:0003674","GO:0016787","GO:0140096"],"is_obsolete":false,"name":"peptidoglycan L,D-transpeptidase activity","termid":"GO:0071972"}


id: PBO:0017850
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cysteine transmembrane transporter (predicted)","termid":"PBO:0017850"}


id: MONDO:0016427
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete coccidioidomycosis (obsolete MONDO:0016427)","termid":"MONDO:0016427","xrefs":{"Monarch":{"xref_id":"0016427"}}}


id: PR:Q9P794
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- usp103 gene.","definition_xrefs":["UniProtKB:Q9P794","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U1 small nuclear ribonucleoprotein C (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP35G2.09","synonyms":[{"name":"Spom972h-usp103","type":"exact"},{"name":"U1 snRNP C (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"U1-C (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"U1C (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P794"}


id: MONDO:0020547
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Chronic graft versus host disease (GVHD) is a complication that can occur after a stem cell or bone marrow transplant in which the newly transplanted donor cells attack the transplant recipient's body. Symptoms may include skin rash, mouth sores, dry eyes, liver inflammation, development of scar tissue in the skin and joints, and damage to the lungs. The exact cause of chronic GVHD is unknown.It likely results from a complex immune-mediated interaction between the donor and recipient cells.Chronic GVHD is treated with prednisone or other similar anti-inflammatory or immunosuppressive medications.","direct_ancestors":[{"relation_name":"is_a","term_name":"graft versus host disease","termid":"MONDO:0013730"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"chronic graft versus host disease","secondary_identifiers":["NCIT:C4981","GARD:10964","icd11.foundation:621183043","MedDRA:10066261","ICD10CM:D89.811","NANDO:2100213","ICD9:279.52","Orphanet:99921","MEDGEN:167851","NANDO:2200812","UMLS:C0867389","SCTID:402356004"],"synonyms":[{"name":"GVHD, chronic","type":"exact"},{"name":"chronic GVHD","type":"related"},{"name":"graft versus host disease, chronic","type":"exact"}],"termid":"MONDO:0020547","xrefs":{"Monarch":{"xref_id":"0020547"}}}


id: SO:0001019
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A variation that increases or decreases the copy number of a given region.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sequence_length_alteration","termid":"SO:0000248"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"copy_number_variation","secondary_identifiers":["http://en.wikipedia.org/wiki/Copy_number_variation"],"synonyms":[{"name":"CNP","type":"exact"},{"name":"CNV","type":"exact"},{"name":"copy number polymorphism","type":"exact"},{"name":"copy number variation","type":"exact"}],"termid":"SO:0001019"}


id: PBO:0053376
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 302","termid":"PBO:0053376"}


id: PBO:0003669
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human c15orf24 ortholog","termid":"PBO:0003669"}


id: GO:0017089
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Removes a glycolipid from a membrane or a monolayer lipid particle, transports it through the aqueous phase while protected in a hydrophobic pocket, and brings it to an acceptor membrane or lipid particle. A glycolipid is a compound usually containing 1-4 linked monosaccharide residues joined by a glycosyl linkage to a lipid.","definition_xrefs":["PMID:30337668"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid transfer activity","termid":"GO:0120013"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0120013"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0120013","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"glycolipid transfer activity","secondary_identifiers":["Reactome:R-HSA-9844955","Reactome:R-HSA-5340320","Reactome:R-HSA-9845055","Reactome:R-HSA-9697077"],"synonyms":[{"name":"glycolipid carrier activity","type":"exact"},{"name":"glycolipid transporter activity","type":"broad"},{"name":"intermembrane glycolipid transfer activity","type":"narrow"},{"name":"intermembrane glycolipid transporter activity","type":"narrow"}],"termid":"GO:0017089"}


id: GO:0072387
data:
  {"annotated_genes":["SJAG_01937"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[78954],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006747"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving flavin adenine dinucleotide, which acts as a coenzyme or prosthetic group of various flavoprotein oxidoreductase enzymes.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide metabolic process","termid":"GO:0009117"},{"relation_name":"is_a","term_name":"flavin-containing compound metabolic process","termid":"GO:0042726"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01937":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"flavin adenine dinucleotide metabolic process","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"FAD or FADH2 metabolic process","type":"exact"},{"name":"flavin adenine dinucleotide metabolism","type":"exact"},{"name":"flavin-adenine dinucleotide metabolic process","type":"exact"}],"termid":"GO:0072387","terms_by_termid":{"GO:0006747":null}}


id: PBO:0055474
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2907","termid":"PBO:0055474"}


id: GO:0005242
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a potassium ion by an inwardly-rectifying voltage-gated channel. An inwardly rectifying current-voltage relation is one where at any given driving force the inward flow of K+ ions exceeds the outward flow for the opposite driving force. The inward-rectification is due to a voltage-dependent block of the channel pore by a specific ligand or ligands, and as a result the macroscopic conductance depends on the difference between membrane voltage and the K+ equilibrium potential rather than on membrane voltage itself.","definition_xrefs":["GOC:mah","PMID:14977398","GOC:cb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"voltage-gated potassium channel activity","termid":"GO:0005249"},{"relation_name":"is_a","term_name":"ligand-gated monoatomic cation channel activity","termid":"GO:0099094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"inward rectifier potassium channel activity","secondary_identifiers":["Reactome:R-HSA-9730521","Reactome:R-HSA-1296046","Reactome:R-HSA-9731072","Reactome:R-HSA-5678261","Reactome:R-HSA-9729870","Reactome:R-HSA-1369017","Reactome:R-HSA-5678418","Reactome:R-HSA-1296045"],"synonyms":[{"name":"Kir channel activity","type":"exact"}],"termid":"GO:0005242"}


id: PBO:0034434
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_break-induced_loss_of_heterozygosity","termid":"PBO:0034434"}


id: GO:0102340
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: (R)-3-hydroxybehenoyl-CoA(4-) + NADP(3-) = 3-oxodocosanoyl-CoA + NADPH + H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 3-oxo-behenoyl-CoA reductase activity (obsolete GO:0102340)","termid":"GO:0102340"}


id: MONDO:1010522
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Frontonasal dysplasia that occurs in cattle.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"frontonasal dysplasia, non-human animal","termid":"MONDO:1010036"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"frontonasal dysplasia, cattle","secondary_identifiers":["OMIA:002307-9913"],"termid":"MONDO:1010522","xrefs":{"Monarch":{"xref_id":"1010522"}}}


id: PBO:0067324
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 415, pseudogene","termid":"PBO:0067324"}


id: GO:0034106
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of erythrocyte clearance.","definition_xrefs":["PMID:12905029","PMID:14754397","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of tissue remodeling","termid":"GO:0034103"},{"relation_name":"regulates","term_name":"erythrocyte clearance","termid":"GO:0034102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of erythrocyte clearance","synonyms":[{"name":"regulation of RBC clearance","type":"exact"},{"name":"regulation of neocytolysis","type":"narrow"},{"name":"regulation of red blood cell clearance","type":"exact"}],"termid":"GO:0034106"}


id: PBO:0116593
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GSE1 antisense RNA 1","termid":"PBO:0116593"}


id: PBO:0068096
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 403","termid":"PBO:0068096"}


id: MONDO:0958278
data:
  {"annotated_genes":["SJAG_01183"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87484],"is_not":false,"summary":null,"term":"MONDO:0958278"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01183":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with hypotonia and characteristic brain abnormalities","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C5935589","MEDGEN:1855201","Orphanet:664430","OMIM:620746"],"termid":"MONDO:0958278","terms_by_termid":{"MONDO:0958278":null},"xrefs":{"Monarch":{"xref_id":"0958278"}}}


id: FYPO:0001467
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cell phenotype observed in the vegetative growth phase of the life cycle in which the steady-state intracellular calcium ion (Ca2+) concentration increases normally following an extracellular Ca2+ stimulus. Normally, a dose-dependent increased steady-state Ca2+ concentration is reached within 2-3 minutes of extracellular Ca2+ addition, and is sustained for several hours.","definition_xrefs":["PMID:21811607","PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete normal increase in steady-state intracellular calcium level following extracellular calcium stimulus (obsolete FYPO:0001467)","synonyms":[{"name":"normal increase in steady-state intracellular calcium level following extracellular calcium stimulus","type":"exact"},{"name":"normal increase in steady-state intracellular calcium level following extracellular calcium stimulus during mitotic cell cycle","type":"related"},{"name":"normal increase in steady-state intracellular calcium level following extracellular calcium stimulus during vegetative growth","type":"exact"}],"termid":"FYPO:0001467"}


id: PBO:0084636
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Methyltransferase that methylates residue G1575 of 18S rRNA; required for rRNA processing and nuclear export of 40S ribosomal subunits independently of methylation activity; functions with DEAH-box RNA helicase Ecm16p; diploid mutant displays random budding pattern; functional homolog of human WBSCR22","termid":"PBO:0084636"}


id: PBO:0062061
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily Y member 1","termid":"PBO:0062061"}


id: MONDO:0018862
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete cat-scratch disease (obsolete MONDO:0018862)","termid":"MONDO:0018862","xrefs":{"Monarch":{"xref_id":"0018862"}}}


id: GO:0033802
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + isoliquiritigenin = 2'-O-methylisoliquiritigenin + S-adenosyl-L-homocysteine + H+.","definition_xrefs":["EC:2.1.1.154","RHEA:21608"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-methyltransferase activity","termid":"GO:0008171"},{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0016741","GO:0003824"],"is_obsolete":false,"name":"isoliquiritigenin 2'-O-methyltransferase activity","secondary_identifiers":["MetaCyc:RXN-3501","KEGG_REACTION:R07242"],"synonyms":[{"name":"CHMT","type":"related"},{"name":"S-adenosyl-L-methionine:isoliquiritigenin 2'-O-methyltransferase activity","type":"related"},{"name":"chalcone OMT","type":"related"}],"termid":"GO:0033802"}


id: GO:0043922
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a host organism stops, prevents, or reduces the frequency, rate or extent of viral transcription.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host-mediated perturbation of symbiont process","termid":"GO:0051851"},{"relation_name":"negatively_regulates","term_name":"viral transcription","termid":"GO:0019083"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation by host of viral transcription","synonyms":[{"name":"negative regulation of viral transcription by host","type":"exact"}],"termid":"GO:0043922"}


id: GO:0102148
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: H2O + an N-acetyl-beta-D-galactosalaminyl-[glycan] = N-acetyl-beta-D-galactosamine + a glycan.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete N-acetyl-beta-D-galactosaminidase activity (obsolete GO:0102148)","termid":"GO:0102148"}


id: GO:1900546
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A regulation of transcription from RNA polymerase II promoter that results in positive regulation of phenotypic switching.","definition_xrefs":["GOC:TermGenie","GOC:di"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of phenotypic switching by regulation of transcription from RNA polymerase II promoter (obsolete GO:1900546)","synonyms":[{"name":"activation of phenotypic dimorphism by regulation of transcription from RNA polymerase II promoter","type":"related"},{"name":"activation of phenotypic switching by regulation of transcription from RNA polymerase II promoter","type":"narrow"},{"name":"positive regulation of phenotypic dimorphism by regulation of transcription from RNA polymerase II promoter","type":"related"},{"name":"up regulation of phenotypic dimorphism by regulation of transcription from RNA polymerase II promoter","type":"related"},{"name":"up regulation of phenotypic switching by regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"up-regulation of phenotypic dimorphism by regulation of transcription from RNA polymerase II promoter","type":"related"},{"name":"up-regulation of phenotypic switching by regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"upregulation of phenotypic dimorphism by regulation of transcription from RNA polymerase II promoter","type":"related"},{"name":"upregulation of phenotypic switching by regulation of transcription from RNA polymerase II promoter","type":"exact"}],"termid":"GO:1900546"}


id: PBO:0087539
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of protein phosphatase PP4 complex; Pph3p and Psy2p form the active complex, Psy4p may provide additional substrate specificity; regulates recovery from the DNA damage checkpoint, the gene conversion- and single-strand annealing-mediated pathways of meiotic double-strand break repair and efficient Non-Homologous End-Joining (NHEJ) pathway; Pph3p and Psy2p localize to foci on meiotic chromosomes; putative homolog of mammalian R3","termid":"PBO:0087539"}


id: GO:0042770
data:
  {"annotated_genes":["SJAG_00486","SJAG_00640","SJAG_00429","SJAG_03026","SJAG_02576","SJAG_02771","SJAG_01680","SJAG_04280","SJAG_02098","SJAG_01429","SJAG_00623","SJAG_01855","SJAG_00327","SJAG_00169","SJAG_03160","SJAG_03048","SJAG_01205","SJAG_01146","SJAG_01708","SJAG_00364","SJAG_02026","SJAG_02563","SJAG_01677","SJAG_01084","SJAG_01044","SJAG_03720","SJAG_03529","SJAG_04140","SJAG_03898","SJAG_04332","SJAG_01605","SJAG_04671","SJAG_04287","SJAG_05373","SJAG_01873","SJAG_02266","SJAG_03942"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[111580,114850,78367,93929,116386,116614,80370],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044773"},{"annotations":[110048,91671],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031571"},{"annotations":[79780,99719,106991,117400,118093,72828,112112,109695,92157,100905,89483,75621,90573,101412,91795],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007095"},{"annotations":[74801,89484,116443,112113,74279,112420,89529,79785,102720,79178,79553,91796,90808,99720,106992,94904,108037,96372,101223],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031573"}]},"cv_name":"biological_process","definition":"A cascade of processes induced by the detection of DNA damage within a cell.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA damage response","termid":"GO:0006974"},{"relation_name":"is_a","term_name":"intracellular signal transduction","termid":"GO:0035556"}],"gene_count":37,"genes_by_uniquename":{"SJAG_00169":null,"SJAG_00327":null,"SJAG_00364":null,"SJAG_00429":null,"SJAG_00486":null,"SJAG_00623":null,"SJAG_00640":null,"SJAG_01044":null,"SJAG_01084":null,"SJAG_01146":null,"SJAG_01205":null,"SJAG_01429":null,"SJAG_01605":null,"SJAG_01677":null,"SJAG_01680":null,"SJAG_01708":null,"SJAG_01855":null,"SJAG_01873":null,"SJAG_02026":null,"SJAG_02098":null,"SJAG_02266":null,"SJAG_02563":null,"SJAG_02576":null,"SJAG_02771":null,"SJAG_03026":null,"SJAG_03048":null,"SJAG_03160":null,"SJAG_03529":null,"SJAG_03720":null,"SJAG_03898":null,"SJAG_03942":null,"SJAG_04140":null,"SJAG_04280":null,"SJAG_04287":null,"SJAG_04332":null,"SJAG_04671":null,"SJAG_05373":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"signal transduction in response to DNA damage","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0006975"],"synonyms":[{"name":"DNA damage induced protein phosphorylation","type":"narrow"},{"name":"DNA damage response, signal transduction","type":"exact"},{"name":"response to DNA damage stimulus by intracellular signaling cascade","type":"exact"}],"termid":"GO:0042770","terms_by_termid":{"GO:0007095":null,"GO:0031571":null,"GO:0031573":null,"GO:0044773":null}}


id: MONDO:0024473
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An infectious disease of the Astrakhan region, Chad, Kosovo, caused by infection with rickettsia conorii subsp. caspia.","definition_xrefs":["PMID:18760001"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Rickettsia conorii infectious disease","termid":"MONDO:0005677"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Astrakhan spotted fever","secondary_identifiers":["DOID:0050041","UMLS:C5574872","MEDGEN:1814171"],"termid":"MONDO:0024473","xrefs":{"Monarch":{"xref_id":"0024473"}}}


id: PBO:0054854
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2268","termid":"PBO:0054854"}


id: GO:0047762
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: trans-caffeate + O2 = 3-(2-carboxyethenyl)-cis,cis-muconate + 2 H+.","definition_xrefs":["EC:1.13.11.22","RHEA:22216"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"caffeate 3,4-dioxygenase activity","secondary_identifiers":["MetaCyc:CAFFEATE-34-DIOXYGENASE-RXN","KEGG_REACTION:R03365"],"synonyms":[{"name":"3,4-dihydroxy-trans-cinnamate:oxygen 3,4-oxidoreductase (decyclizing)","type":"related"}],"termid":"GO:0047762"}


id: PBO:0039435
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin and armadillo repeat containing","termid":"PBO:0039435"}


id: GO:0099566
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that regulates the concentration of calcium in the postsynaptic cytosol.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytosolic calcium ion concentration","termid":"GO:0051480"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0098771"}],"interesting_parent_ids":["GO:0008150","GO:0098771"],"is_obsolete":false,"name":"regulation of postsynaptic cytosolic calcium ion concentration","synonyms":[{"name":"regulation of postsynaptic cytosolic calcium levels","type":"exact"}],"termid":"GO:0099566"}


id: PBO:0002651
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"variant protein kinase 19 family protein","termid":"PBO:0002651"}


id: MONDO:0033364
data:
  {"annotated_genes":["SJAG_02913"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85802],"is_not":false,"summary":null,"term":"MONDO:0033364"}]},"cv_name":"mondo","definition":"A developmental and epileptic encephalopathy characterized by onset in the first weeks or months of life of refractory seizures, profoundly impaired intellectual development, absent speech, spastic quadriplegia, and dyskinetic movements that has material basis in homozygous or compound heterozygous mutation in the PIGP gene on chromosome 21q22.","definition_xrefs":["DOID:0080283"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"inherited lipid metabolism disorder","termid":"MONDO:0002525"},{"relation_name":"is_a","term_name":"congenital disorder of glycosylation","termid":"MONDO:0015286"},{"relation_name":"is_a","term_name":"disorder of GPI anchor biosynthesis","termid":"MONDO:0024321"},{"relation_name":"is_a","term_name":"developmental and epileptic encephalopathy","termid":"MONDO:0100062"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02913":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0024322"},{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0700092"},{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0024322","MONDO:0002525","MONDO:0700092","MONDO:0005027","MONDO:0002320","MONDO:0005066"],"is_obsolete":false,"name":"developmental and epileptic encephalopathy, 55","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C4539843","MEDGEN:1622363","GARD:16241","OMIM:617599"],"synonyms":[{"name":"DEE55","type":"exact"},{"name":"EIEE55","type":"exact"},{"name":"developmental and epileptic encephalopathy 55","type":"exact"},{"name":"epileptic encephalopathy, early infantile, 55","type":"exact"},{"name":"glycosylphosphatidylinositol biosynthesis defect 14","type":"related"},{"name":"infantile epileptic encephalopathy 55","type":"related"}],"termid":"MONDO:0033364","terms_by_termid":{"MONDO:0033364":null},"xrefs":{"Monarch":{"xref_id":"0033364"}}}


id: PBO:0086681
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; identified by gene-trapping, microarray-based expression analysis, and genome-wide homology searching; YLR157W-D has a paralog, YLR161W, that arose from a segmental duplication","termid":"PBO:0086681"}


id: GO:0004467
data:
  {"annotated_genes":["SJAG_03471","SJAG_03909"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[105967,113808],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090432"},{"annotations":[105968],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090434"},{"annotations":[105969],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090433"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a long-chain fatty acid + ATP + CoA = a long-chain fatty acyl-CoA + AMP + diphosphate. A long-chain fatty acid has an aliphatic tail containing 13 to 22 carbons.","definition_xrefs":["RHEA:15421"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty acid-CoA ligase activity","termid":"GO:0120515"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03471":null,"SJAG_03909":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016874"],"is_obsolete":false,"name":"long-chain fatty acid-CoA ligase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:RXN-7904","Reactome:R-HSA-193407","EC:6.2.1.3","Reactome:R-HSA-2046098","Reactome:R-HSA-193727","Reactome:R-HSA-159425","Reactome:R-HSA-193766","Reactome:R-HSA-5696004","Reactome:R-HSA-9734535","Reactome:R-HSA-193401","Reactome:R-HSA-193424","GO:0003996","Reactome:R-HSA-193743","Reactome:R-HSA-201035","Reactome:R-HSA-193711","Reactome:R-HSA-2046085","Reactome:R-HSA-548843","Reactome:R-HSA-192137"],"synonyms":[{"name":"LCFA synthetase activity","type":"related"},{"name":"acyl-CoA ligase activity","type":"related"},{"name":"acyl-CoA synthetase activity","type":"related"},{"name":"acyl-activating enzyme activity","type":"broad"},{"name":"fatty acid thiokinase (long-chain) activity","type":"related"},{"name":"lignoceroyl-CoA synthase activity","type":"related"},{"name":"long chain fatty acyl-CoA synthetase activity","type":"related"},{"name":"long-chain acyl CoA synthetase activity","type":"related"},{"name":"long-chain acyl-CoA synthetase activity","type":"exact"},{"name":"long-chain acyl-coenzyme A synthetase activity","type":"related"},{"name":"long-chain fatty acid activation","type":"related"},{"name":"long-chain fatty acyl coenzyme A synthetase activity","type":"related"},{"name":"long-chain-fatty-acid-CoA ligase activity","type":"exact"},{"name":"long-chain-fatty-acyl-CoA synthetase activity","type":"exact"},{"name":"pristanoyl-CoA synthetase","type":"narrow"},{"name":"stearoyl-CoA synthetase","type":"narrow"},{"name":"thiokinase","type":"related"}],"termid":"GO:0004467","terms_by_termid":{"GO:0090432":null,"GO:0090433":null,"GO:0090434":null}}


id: PBO:0044925
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diacylglycerol kinase beta","termid":"PBO:0044925"}


id: FYPO:0004495
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell is inviable, branched, has more than one septum, and has a larger volume and is longer, than normal. In a swollen cell, both length and diameter may be greater than normal, although the cell is only considered elongated if the length:diameter ratio is also greater than normal.","definition_xrefs":["PomBase:jh","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable branched, elongated, multiseptate vegetative cell","termid":"FYPO:0003413"},{"relation_name":"is_a","term_name":"inviable branched, swollen, elongated vegetative cell","termid":"FYPO:0004494"},{"relation_name":"is_a","term_name":"inviable swollen elongated multiseptate vegetative cell","termid":"FYPO:0006946"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0001320","FYPO:0000005","FYPO:0000004","FYPO:0001985","FYPO:0000032","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"inviable branched, swollen, elongated, multiseptate vegetative cell","synonyms":[{"name":"inviable branched, elongated, swollen, multiseptate vegetative cell","type":"exact"},{"name":"inviable branched, swollen, elongated, multiseptate cell during vegetative growth","type":"exact"},{"name":"inviable branched, swollen, elongated, multiseptate vegetative cell during mitotic cell cycle","type":"related"},{"name":"lethal; branched, swollen, elongated, multiseptate vegetative cell","type":"exact"}],"termid":"FYPO:0004495"}


id: MOD:00627
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative","definition_xrefs":["Unimod:316"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"},{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2,5-dimethylpyrrole lysine from 2,5-hexanedione adduct","synonyms":[{"name":"(2S)-2-amino-6-(2,5-dimethylpyrrolidin-1-yl)hexanoic acid","type":"exact"},{"name":"2,5-dimethypyrrole","type":"related"},{"name":"6-(2,5-dimethylpyrrolidin-1-yl)norleucine","type":"exact"},{"name":"DimethylpyrroleAdduct","type":"related"}],"termid":"MOD:00627"}


id: PBO:0076144
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUCLG2 pseudogene 3","termid":"PBO:0076144"}


id: FYPO:0000242
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population growth phenotype in which cells grow normally (i.e. indistinguishably from wild type) in a medium containing ammonia as the nitrogen source.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002058"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0000139","FYPO:0000003","FYPO:0002058","FYPO:0000257","FYPO:0002060"],"is_obsolete":false,"name":"normal growth on ammonia nitrogen source","synonyms":[{"name":"growth defect, normal growth with ammonia nitrogen source","type":"related"},{"name":"normal cell population growth on ammonia nitrogen source","type":"exact"},{"name":"normal vegetative cell population growth on ammonia nitrogen source","type":"exact"}],"termid":"FYPO:0000242"}


id: PBO:0077414
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 150B","termid":"PBO:0077414"}


id: PBO:0057082
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 181b-1","termid":"PBO:0057082"}


id: PBO:0117243
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycine cleavage complex subunit T, Gcv1","termid":"PBO:0117243"}


id: PBO:0046524
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endoplasmic reticulum to nucleus signaling 1","termid":"PBO:0046524"}


id: MONDO:0001725
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A chronic and progressive inflammatory process that affects the glans penis and the foreskin. It presents with white atrophic patches in the glans of penis and foreskin and it is often associated with the development of a sclerotic, whitish ring in the tip of the foreskin that may lead to phimosis. It is also known as lichen sclerosus of the penis.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"balanitis","termid":"MONDO:0006672"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"balanitis xerotica obliterans","secondary_identifiers":["MESH:D052798","DOID:13477","NCIT:C3523","SCTID:198033005","UMLS:C0152460","MEDGEN:57542","ICD9:607.81"],"synonyms":[{"name":"lichen Sclerosus of penis","type":"exact"},{"name":"lichen Sclerosus of the penis","type":"exact"},{"name":"penile lichen Sclerosus","type":"exact"}],"termid":"MONDO:0001725","xrefs":{"Monarch":{"xref_id":"0001725"}}}


id: PBO:0055587
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3023","termid":"PBO:0055587"}


id: MONDO:0015481
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Coloboma of inferior eyelid is a rare developmental defect during embryogenesis characterized by a unilateral or bilateral, partial or full-thickness, variably sized defect of the inferior eyelid (ranging from a small notch to complete absence of the entire lid) which is usually triangular in shape (with base at eyelid margin) and located on the lateral third of the lid. It can occur isolated, associated with facial clefting or as part of a syndrome.","definition_xrefs":["Orphanet:155889"],"direct_ancestors":[{"relation_name":"is_a","term_name":"facial cleft","termid":"MONDO:0015411"},{"relation_name":"is_a","term_name":"coloboma of eyelid","termid":"MONDO:0020357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"coloboma of inferior eyelid","secondary_identifiers":["UMLS:C1837826","GARD:19978","MEDGEN:373417","SCTID:763133008"],"synonyms":[{"name":"Inferior palpebral coloboma","type":"exact"}],"termid":"MONDO:0015481","xrefs":{"Monarch":{"xref_id":"0015481"}}}


id: PBO:0033821
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Supressor of Rad Wee1","termid":"PBO:0033821"}


id: GO:1900602
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of endocrocin.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ketone biosynthetic process","termid":"GO:0042181"},{"relation_name":"is_a","term_name":"secondary metabolite biosynthetic process","termid":"GO:0044550"},{"relation_name":"is_a","term_name":"phenol-containing compound biosynthetic process","termid":"GO:0046189"},{"relation_name":"is_a","term_name":"carboxylic acid biosynthetic process","termid":"GO:0046394"},{"relation_name":"is_a","term_name":"endocrocin metabolic process","termid":"GO:1900600"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0019748"],"is_obsolete":false,"name":"endocrocin biosynthetic process","synonyms":[{"name":"endocrocin anabolism","type":"exact"},{"name":"endocrocin biosynthesis","type":"exact"},{"name":"endocrocin formation","type":"exact"},{"name":"endocrocin synthesis","type":"exact"}],"termid":"GO:1900602"}


id: PBO:0068075
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 380","termid":"PBO:0068075"}


id: GO:0015484
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Any substance that causes the lysis of red blood cells.","definition_xrefs":["ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete hemolysin activity (obsolete GO:0015484)","synonyms":[{"name":"hemolysin activity","type":"exact"}],"termid":"GO:0015484"}


id: PBO:0090526
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase assembly protein Coa4","termid":"PBO:0090526"}


id: PBO:0049283
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione S-transferase alpha 2","termid":"PBO:0049283"}


id: GO:1902223
data:
  {"annotated_genes":["SJAG_03124","SJAG_03312","SJAG_02505","SJAG_04652","SJAG_03167","SJAG_05007","SJAG_01455"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[78287,98702],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009094"},{"annotations":[73671,77573,79599,74615],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000162"},{"annotations":[77039,79142],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006571"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of erythrose 4-phosphate/phosphoenolpyruvate family amino acid.","definition_xrefs":["GOC:pr","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-amino acid biosynthetic process","termid":"GO:0170034"},{"relation_name":"is_a","term_name":"proteinogenic amino acid biosynthetic process","termid":"GO:0170038"},{"relation_name":"is_a","term_name":"erythrose 4-phosphate/phosphoenolpyruvate family amino acid metabolic process","termid":"GO:1902221"}],"gene_count":7,"genes_by_uniquename":{"SJAG_01455":null,"SJAG_02505":null,"SJAG_03124":null,"SJAG_03167":null,"SJAG_03312":null,"SJAG_04652":null,"SJAG_05007":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006520"],"is_obsolete":false,"name":"erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"erythrose 4-phosphate/phosphoenolpyruvate family amino acid anabolism","type":"exact"},{"name":"erythrose 4-phosphate/phosphoenolpyruvate family amino acid biosynthesis","type":"exact"},{"name":"erythrose 4-phosphate/phosphoenolpyruvate family amino acid formation","type":"exact"},{"name":"erythrose 4-phosphate/phosphoenolpyruvate family amino acid synthesis","type":"exact"}],"termid":"GO:1902223","terms_by_termid":{"GO:0000162":null,"GO:0006571":null,"GO:0009094":null}}


id: GO:1903706
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of hemopoiesis.","definition_xrefs":["GOC:PARL","GOC:TermGenie","PMID:20080761","GO_REF:0000058","GOC:pad"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of immune system process","termid":"GO:0002682"},{"relation_name":"is_a","term_name":"regulation of cell development","termid":"GO:0060284"},{"relation_name":"is_a","term_name":"regulation of multicellular organismal development","termid":"GO:2000026"},{"relation_name":"regulates","term_name":"hemopoiesis","termid":"GO:0030097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of hemopoiesis","synonyms":[{"name":"regulation of blood cell biosynthesis","type":"exact"},{"name":"regulation of blood cell formation","type":"exact"},{"name":"regulation of haemopoiesis","type":"exact"},{"name":"regulation of hematopoiesis","type":"exact"}],"termid":"GO:1903706"}


id: GO:0070486
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The adhesion of one leukocyte to one or more other leukocytes via adhesion molecules.","definition_xrefs":["GOC:sl","PMID:12972508"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukocyte cell-cell adhesion","termid":"GO:0007159"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"leukocyte aggregation","synonyms":[{"name":"immune cell aggregation","type":"exact"},{"name":"leucocyte aggregation","type":"exact"},{"name":"white blood cell aggregation","type":"exact"},{"name":"white corpuscle aggregation","type":"exact"}],"termid":"GO:0070486"}


id: FYPO:0002973
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of ubiquitin ligase activity is increased during metaphase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased ubiquitin ligase activity","termid":"FYPO:0002972"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000661","FYPO:0001985","FYPO:0000654","FYPO:0000652"],"is_obsolete":false,"name":"increased ubiquitin ligase activity during mitotic metaphase","synonyms":[{"name":"increased ubiquitin ligase activity during metaphase of mitosis","type":"exact"},{"name":"increased ubiquitin-protein ligase activity during mitotic metaphase","type":"exact"}],"termid":"FYPO:0002973"}


id: PATO:0000758
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A balance quality inhering in a bearer by virtue of the bearer's lacking balance.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"balance","termid":"PATO:0000185"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unbalanced","termid":"PATO:0000758"}


id: MOD:00823
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-methionine residue and an L-cysteine residue by a thioester bond to form S-(L-methionyl)-L-cysteine.","definition_xrefs":["RESID:AA0413","PubMed:12146974"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thioester crosslinked residues","termid":"MOD:00395"},{"relation_name":"is_a","term_name":"crosslinked residues with loss of water","termid":"MOD:00954"},{"relation_name":"is_a","term_name":"crosslinked L-methionine residue","termid":"MOD:02052"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"S-(L-methionyl)-L-cysteine","synonyms":[{"name":"(2R)-2-amino-3-([(2S)-2-amino-4-(methylsulfanyl)butanoyl]sulfanyl)propanoic acid","type":"exact"},{"name":"CROSSLNK Methionyl cysteine thioester (Cys-Met)","type":"exact"},{"name":"S-(2-amino-4-methylthiobutanoyl)cysteine","type":"exact"},{"name":"S-(L-methionyl)-L-cysteine","type":"exact"},{"name":"XLNK1MetSCys","type":"exact"},{"name":"methionine cysteine thioester","type":"exact"}],"termid":"MOD:00823"}


id: PBO:0050533
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone PARylation factor 1","termid":"PBO:0050533"}


id: GO:0002035
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an angiotensin-mediated signaling system present in the brain regulates the force with which blood passes through the circulatory system.","definition_xrefs":["PMID:2909574"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system process involved in regulation of systemic arterial blood pressure","termid":"GO:0001976"},{"relation_name":"is_a","term_name":"regulation of blood volume by renin-angiotensin","termid":"GO:0002016"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"brain renin-angiotensin system","termid":"GO:0002035"}


id: PBO:0069557
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 829, pseudogene","termid":"PBO:0069557"}


id: PBO:0069549
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 820, pseudogene","termid":"PBO:0069549"}


id: PBO:0000651
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CAAX prenyl protease (predicted)","termid":"PBO:0000651"}


id: MONDO:0010778
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare abnormality of the neuroendocrine system that is characterized by episodic nausea and vomiting.","definition_xrefs":["PMID:25332060","PMID:22634989"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuroendocrine disorder","termid":"MONDO:0100070"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclic vomiting syndrome","secondary_identifiers":["icd11.foundation:1434288855","MEDGEN:57509","NANDO:2200919","OMIM:500007","UMLS:C0152164","NANDO:2100258"],"synonyms":[{"name":"CVS","type":"related"},{"name":"Cvs-plus","type":"related"},{"name":"cyclic vomiting syndrome","type":"exact"},{"name":"cyclic vomiting syndrome with neuromuscular disease","type":"related"},{"name":"cyclic vomiting syndrome-plus","type":"related"}],"termid":"MONDO:0010778","xrefs":{"Monarch":{"xref_id":"0010778"}}}


id: GO:0002286
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The change in morphology and behavior of a mature or immature T cell resulting from exposure to a mitogen, cytokine, chemokine, cellular ligand, or an antigen for which it is specific, leading to the initiation or perpetuation of an immune response.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphocyte activation involved in immune response","termid":"GO:0002285"},{"relation_name":"is_a","term_name":"T cell activation","termid":"GO:0042110"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"T cell activation involved in immune response","synonyms":[{"name":"T cell activation during immune response","type":"related"},{"name":"T lymphocyte activation during immune response","type":"related"},{"name":"T-cell activation during immune response","type":"related"},{"name":"T-lymphocyte activation during immune response","type":"related"}],"termid":"GO:0002286"}


id: PR:Q9US20
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- slc1 gene.","definition_xrefs":["UniProtKB:Q9US20","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized acyltransferase C1851.02 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1851.02","synonyms":[{"name":"Spom972h-slc1","type":"exact"}],"termid":"PR:Q9US20"}


id: PBO:0067684
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5.8S ribosomal 1","termid":"PBO:0067684"}


id: PBO:0069533
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 803, pseudogene","termid":"PBO:0069533"}


id: GO:0047804
data:
  {"annotated_genes":["SJAG_03671"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[68801],"is_not":false,"summary":null,"term":"GO:0047804"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: S-substituted L-cysteine + H2O = a thiol + NH4+ + pyruvate.","definition_xrefs":["RHEA:18121"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-sulfur lyase activity","termid":"GO:0016846"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03671":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"cysteine-S-conjugate beta-lyase activity","references_by_uniquename":{"GO_REF:0000002":null},"secondary_identifiers":["EC:4.4.1.13","MetaCyc:RXN-6763"],"synonyms":[{"name":"L-cysteine-S-conjugate thiol-lyase (deaminating) activity","type":"related"},{"name":"L-cysteine-S-conjugate thiol-lyase (deaminating; pyruvate-forming)","type":"related"},{"name":"S-alkylcysteine lyase activity","type":"related"},{"name":"alkylcysteine lyase activity","type":"related"},{"name":"cystathionine beta-lyase activity","type":"related"},{"name":"cysteine conjugate beta-lyase activity","type":"related"},{"name":"cysteine-S-conjugate b-lyase activity","type":"exact"},{"name":"glutamine transaminase K/cysteine conjugate beta-lyase activity","type":"related"}],"termid":"GO:0047804","terms_by_termid":{"GO:0047804":null}}


id: MONDO:0025517
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A allergic disease involving a shrimp food product.","definition_xrefs":["MONDO:patterns/allergy"],"gene_count":0,"genotype_count":0,"name":"obsolete shrimp allergy (obsolete MONDO:0025517)","secondary_identifiers":["DOID:0040001"],"synonyms":[{"name":"allergy of shrimp food product","type":"exact"},{"name":"shrimp food product allergic disease","type":"exact"}],"termid":"MONDO:0025517","xrefs":{"Monarch":{"xref_id":"0025517"}}}


id: MONDO:0800342
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete cap myopathy 2 (obsolete MONDO:0800342)","termid":"MONDO:0800342","xrefs":{"Monarch":{"xref_id":"0800342"}}}


id: MONDO:0022892
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"craniosynostosis","termid":"MONDO:0015469"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"craniosynostosis alopecia brain defect","secondary_identifiers":["GARD:1586"],"termid":"MONDO:0022892","xrefs":{"Monarch":{"xref_id":"0022892"}}}


id: MONDO:0042908
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Schaap-Taylor-Baraitser syndrome (obsolete MONDO:0042908)","termid":"MONDO:0042908","xrefs":{"Monarch":{"xref_id":"0042908"}}}


id: GO:1905050
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of metallopeptidase activity.","definition_xrefs":["GO_REF:0000059","GOC:TermGenie","PMID:26473732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of peptidase activity","termid":"GO:0010952"},{"relation_name":"is_a","term_name":"regulation of metallopeptidase activity","termid":"GO:1905048"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of metallopeptidase activity","synonyms":[{"name":"activation of metallopeptidase activity","type":"narrow"},{"name":"activation of metalloprotease activity","type":"narrow"},{"name":"activation of metalloproteinase activity","type":"narrow"},{"name":"positive regulation of metalloprotease activity","type":"narrow"},{"name":"positive regulation of metalloproteinase activity","type":"narrow"},{"name":"up regulation of metallopeptidase activity","type":"exact"},{"name":"up regulation of metalloprotease activity","type":"narrow"},{"name":"up regulation of metalloproteinase activity","type":"narrow"},{"name":"up-regulation of metallopeptidase activity","type":"exact"},{"name":"up-regulation of metalloprotease activity","type":"narrow"},{"name":"up-regulation of metalloproteinase activity","type":"narrow"},{"name":"upregulation of metallopeptidase activity","type":"exact"},{"name":"upregulation of metalloprotease activity","type":"narrow"},{"name":"upregulation of metalloproteinase activity","type":"narrow"}],"termid":"GO:1905050"}


id: FYPO:0004492
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which formation of the mature 5' end of an RNA molecule is abnormal.","definition_xrefs":["PomBase:mah","GO:0000967"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal RNA processing","termid":"FYPO:0001553"},{"relation_name":"is_a","term_name":"abnormal ribosome biogenesis","termid":"FYPO:0005017"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0006551","FYPO:0005447","FYPO:0000294","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"abnormal RNA 5'-end processing","synonyms":[{"name":"abnormal RNA 5'-end processing during mitotic cell cycle","type":"related"},{"name":"abnormal RNA 5'-end processing during vegetative growth","type":"exact"}],"termid":"FYPO:0004492"}


id: PBO:0012255
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetratrico peptide repeat","termid":"PBO:0012255"}


id: PBO:0084363
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Linker protein responsible for recruitment of myosin to the bud neck; interacts with the C-terminal extensions of septins Cdc11p and Shs1p and binds Myo1p to promote cytokinesis","termid":"PBO:0084363"}


id: PBO:0008072
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. cerevisiae YPS1","termid":"PBO:0008072"}


id: GO:0034112
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of homotypic cell-cell adhesion.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell-cell adhesion","termid":"GO:0022409"},{"relation_name":"is_a","term_name":"regulation of homotypic cell-cell adhesion","termid":"GO:0034110"},{"relation_name":"positively_regulates","term_name":"homotypic cell-cell adhesion","termid":"GO:0034109"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"positive regulation of homotypic cell-cell adhesion","termid":"GO:0034112"}


id: MONDO:0011852
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any inherited isolated nail anomaly in which the cause of the disease is a mutation in the COL7A1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited isolated nail anomaly","termid":"MONDO:0019284"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nonsyndromic congenital nail disorder 8","secondary_identifiers":["OMIM:607523","UMLS:C1843761","MESH:C564384","DOID:0080086","MEDGEN:375277"],"synonyms":[{"name":"COL7A1 inherited isolated nail anomaly","type":"exact"},{"name":"NDNC8","type":"related"},{"name":"inherited isolated nail anomaly caused by mutation in COL7A1","type":"exact"},{"name":"nail disorder, nonsyndromic congenital, 8","type":"related"},{"name":"nail disorder, nonsyndromic congenital, type 8","type":"exact"},{"name":"nonsyndromic congenital nail disorder type 8","type":"exact"},{"name":"toenail dystrophy, isolated","type":"related"}],"termid":"MONDO:0011852","xrefs":{"Monarch":{"xref_id":"0011852"}}}


id: PR:000050480
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the fin1 gene in Schizosaccharomyces pombe.","definition_xrefs":["PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G2-specific protein kinase fin1 (Schizosaccharomyces pombe)","pombase_gene_id":"SPAC19E9.02","synonyms":[{"name":"SPAC19E9.02","type":"related"},{"name":"Spom-fin1","type":"exact"},{"name":"fin1","type":"related"}],"termid":"PR:000050480"}


id: PBO:0086343
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pseudouridine synthase; catalyzes only the formation of pseudouridine (Psi)-2819 in mitochondrial 21S rRNA; not essential for viability","termid":"PBO:0086343"}


id: GO:0061072
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the iris is generated and organized. The iris is an anatomical structure in the eye whose opening forms the pupil. The iris is responsible for controlling the diameter and size of the pupil and the amount of light reaching the retina.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"},{"relation_name":"part_of","term_name":"camera-type eye morphogenesis","termid":"GO:0048593"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"iris morphogenesis","termid":"GO:0061072"}


id: PBO:0076769
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tudor domain containing 7","termid":"PBO:0076769"}


id: MONDO:0015844
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"uterine disorder","termid":"MONDO:0002654"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"agenesis and aplasia of uterine body","secondary_identifiers":["UMLS:C5230999","MEDGEN:1687110","Orphanet:180142","GARD:20185","icd11.foundation:25664922"],"termid":"MONDO:0015844","xrefs":{"Monarch":{"xref_id":"0015844"}}}


id: GO:0039642
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The region of a virion in which the nucleic acid is confined.","definition_xrefs":["GOC:bm","PMID:14291596"],"direct_ancestors":[{"relation_name":"is_a","term_name":"virion component","termid":"GO:0044423"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"virion nucleoid","termid":"GO:0039642"}


id: MONDO:0002515
data:
  {"annotated_genes":["SJAG_01166","SJAG_03363","SJAG_03011","SJAG_01841","SJAG_00938","SJAG_04277","SJAG_04944","SJAG_04109","SJAG_03961","SJAG_03535","SJAG_02049","SJAG_01012","SJAG_00175","SJAG_02015","SJAG_00409","SJAG_04956","SJAG_01372","SJAG_02896","SJAG_05194","SJAG_01950","SJAG_02876","SJAG_00358"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[85901],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013111"},{"annotations":[85685],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008294"},{"annotations":[87155],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011559"},{"annotations":[87650],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012672"},{"annotations":[87402],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013995"},{"annotations":[87339,87340],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030810"},{"annotations":[86244],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0031040"},{"annotations":[86085],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008296"},{"annotations":[87007],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007256"},{"annotations":[86236],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007369"},{"annotations":[86291],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0024568"},{"annotations":[85499],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014659"},{"annotations":[87212],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032844"},{"annotations":[85715],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010939"},{"annotations":[86494],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008265"},{"annotations":[86433],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014860"},{"annotations":[85474],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054743"},{"annotations":[85831],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013000"},{"annotations":[87278],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011156"},{"annotations":[85911],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011214"},{"annotations":[85523],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008319"},{"annotations":[87024,87025],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013771"},{"annotations":[86104],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008297"},{"annotations":[86749],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0957577"},{"annotations":[87087],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010420"}]},"cv_name":"mondo","definition":"A non-neoplastic or neoplastic disorder that affects the liver, bile ducts, and gallbladder. Representative examples of non-neoplastic disorders include hepatitis, cirrhosis, cholangitis, and cholecystitis. Representative examples of neoplastic disorders include hepatocellular adenoma, hepatocellular carcinoma, and cholangiocarcinoma.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"digestive system disorder","termid":"MONDO:0004335"}],"gene_count":22,"genes_by_uniquename":{"SJAG_00175":null,"SJAG_00358":null,"SJAG_00409":null,"SJAG_00938":null,"SJAG_01012":null,"SJAG_01166":null,"SJAG_01372":null,"SJAG_01841":null,"SJAG_01950":null,"SJAG_02015":null,"SJAG_02049":null,"SJAG_02876":null,"SJAG_02896":null,"SJAG_03011":null,"SJAG_03363":null,"SJAG_03535":null,"SJAG_03961":null,"SJAG_04109":null,"SJAG_04277":null,"SJAG_04944":null,"SJAG_04956":null,"SJAG_05194":null},"genotype_count":0,"in_subsets":["pombe_mondo_slim"],"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"hepatobiliary disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NCIT:C3959","UMLS:C0267792","EFO:0010284","DOID:3118","MEDGEN:82758"],"synonyms":[{"name":"disease of hepatobiliary system","type":"exact"},{"name":"disease or disorder of hepatobiliary system","type":"exact"},{"name":"disorder of hepatobiliary system","type":"exact"},{"name":"hepatobiliary disorder","type":"exact"},{"name":"hepatobiliary system disease","type":"exact"},{"name":"hepatobiliary system disease or disorder","type":"exact"},{"name":"liver and biliary disease","type":"exact"},{"name":"liver and biliary disorder","type":"exact"},{"name":"liver and biliary system disorder","type":"exact"},{"name":"liver and biliary tract disease","type":"exact"}],"termid":"MONDO:0002515","terms_by_termid":{"MONDO:0007256":null,"MONDO:0007369":null,"MONDO:0008265":null,"MONDO:0008294":null,"MONDO:0008296":null,"MONDO:0008297":null,"MONDO:0008319":null,"MONDO:0010420":null,"MONDO:0010939":null,"MONDO:0011156":null,"MONDO:0011214":null,"MONDO:0011559":null,"MONDO:0012672":null,"MONDO:0013000":null,"MONDO:0013111":null,"MONDO:0013771":null,"MONDO:0013995":null,"MONDO:0014659":null,"MONDO:0014860":null,"MONDO:0024568":null,"MONDO:0030810":null,"MONDO:0031040":null,"MONDO:0032844":null,"MONDO:0054743":null,"MONDO:0957577":null},"xrefs":{"Monarch":{"xref_id":"0002515"}}}


id: PBO:0043679
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coronin 6","termid":"PBO:0043679"}


id: GO:0072339
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of lactams, any cyclic amides of amino carboxylic acids, having a 1-azacycloalkan-2-one structure, or analogues having unsaturation or heteroatoms replacing one or more carbon atoms of the ring.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amide biosynthetic process","termid":"GO:0043604"},{"relation_name":"is_a","term_name":"lactam metabolic process","termid":"GO:0072338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"lactam biosynthetic process","synonyms":[{"name":"cellular lactam anabolism","type":"exact"},{"name":"cellular lactam biosynthesis","type":"exact"},{"name":"cellular lactam biosynthetic process","type":"exact"},{"name":"cellular lactam formation","type":"exact"},{"name":"cellular lactam synthesis","type":"exact"}],"termid":"GO:0072339"}


id: PBO:0055357
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2786","termid":"PBO:0055357"}


id: PBO:0034354
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-in_tandem_paralogy_relationship_with","termid":"PBO:0034354"}


id: PBO:0002080
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoskeletal protein binding protein Sla1 family, Shd1 (predicted)","termid":"PBO:0002080"}


id: PBO:0000098
data:
  {"annotation_feature_type":"gene","cv_name":"feature_cvtermprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"with","termid":"PBO:0000098"}


id: GO:0052687
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (3R)-3-isopropenyl-6-oxoheptanoate + CoA-SH + ATP = H2O + ADP + phosphate + (3R)-3-isopropenyl-6-oxoheptanoyl-CoA.","definition_xrefs":["KEGG_REACTION:R06396"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CoA-ligase activity","termid":"GO:0016405"},{"relation_name":"is_a","term_name":"acid-thiol ligase activity","termid":"GO:0016878"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016874"],"is_obsolete":false,"name":"(3R)-3-isopropenyl-6-oxoheptanoate:CoA ligase (ADP-forming) activity","synonyms":[{"name":"3-isopropenyl-6-oxoheptanoyl-CoA synthetase activity","type":"broad"}],"termid":"GO:0052687"}


id: PBO:0051545
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IL6ST divergent transcript","termid":"PBO:0051545"}


id: PBO:0061697
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear protein 1, transcriptional regulator","termid":"PBO:0061697"}


id: PBO:0005456
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sir2 family histone deacetylase Hst2","termid":"PBO:0005456"}


id: MONDO:0014476
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary episodic ataxia","termid":"MONDO:0016227"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"episodic ataxia type 8","secondary_identifiers":["GARD:17665","MEDGEN:863545","UMLS:C4015108","OMIM:616055","DOID:0050996","Orphanet:401953"],"synonyms":[{"name":"EA8","type":"related"},{"name":"episodic ataxia type 8","type":"exact"},{"name":"episodic ataxia with slurred speech","type":"related"},{"name":"episodic ataxia, type 8","type":"related"}],"termid":"MONDO:0014476","xrefs":{"Monarch":{"xref_id":"0014476"}}}


id: MONDO:1012182
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial myopathy, non-human animal","termid":"MONDO:1011791"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial myopathy, dog","secondary_identifiers":["OMIA:000695-9615"],"termid":"MONDO:1012182","xrefs":{"Monarch":{"xref_id":"1012182"}}}


id: PBO:0046178
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongation factor for RNA polymerase II","termid":"PBO:0046178"}


id: GO:0031252
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The area of a motile cell closest to the direction of movement.","definition_xrefs":["GOC:pg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"cell leading edge","synonyms":[{"name":"front of cell","type":"exact"},{"name":"leading edge of cell","type":"exact"}],"termid":"GO:0031252"}


id: PBO:0062555
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 10 subfamily A member 2","termid":"PBO:0062555"}


id: GO:1900959
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of 17-methylnonadec-1-ene metabolic process.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of olefin metabolic process","termid":"GO:1900908"},{"relation_name":"regulates","term_name":"17-methylnonadec-1-ene metabolic process","termid":"GO:1900882"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of 17-methylnonadec-1-ene metabolic process","synonyms":[{"name":"regulation of 17-methylnonadec-1-ene metabolism","type":"exact"}],"termid":"GO:1900959"}


id: MONDO:0011720
data:
  {"annotated_genes":["SJAG_02463","SJAG_01941"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87175,87176],"is_not":false,"summary":null,"term":"MONDO:0011720"}]},"cv_name":"mondo","definition":"Any azoospermia in which the cause of the disease is a mutation in the SLC26A8 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spermatogenic failure","termid":"MONDO:0004983"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01941":null,"SJAG_02463":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"spermatogenic failure 3","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MESH:C564665","DOID:0070168","GARD:18399","MEDGEN:1648302","OMIM:606766","UMLS:C4721889"],"synonyms":[{"name":"SLC26A8 azoospermia","type":"exact"},{"name":"SPGF3","type":"related"},{"name":"azoospermia caused by mutation in SLC26A8","type":"exact"},{"name":"spermatogenic failure 3","type":"exact"},{"name":"spermatogenic failure type 3","type":"exact"}],"termid":"MONDO:0011720","terms_by_termid":{"MONDO:0011720":null},"xrefs":{"Monarch":{"xref_id":"0011720"}}}


id: PBO:0075334
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SORBS2 antisense RNA 1","termid":"PBO:0075334"}


id: MONDO:1012465
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"idiopathic congenital chondrodystrophy, non-human animal","termid":"MONDO:1011964"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"idiopathic congenital chondrodystrophy, cattle","secondary_identifiers":["OMIA:001814-9913"],"termid":"MONDO:1012465","xrefs":{"Monarch":{"xref_id":"1012465"}}}


id: PBO:0091518
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-amylase homolog","termid":"PBO:0091518"}


id: PBO:0058533
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6078","termid":"PBO:0058533"}


id: PBO:0017031
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human GEMIN7 ortholog","termid":"PBO:0017031"}


id: GO:0042749
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the circadian sleep/wake cycle.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of circadian rhythm","termid":"GO:0042752"},{"relation_name":"is_a","term_name":"regulation of behavior","termid":"GO:0050795"},{"relation_name":"regulates","term_name":"circadian sleep/wake cycle","termid":"GO:0042745"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of circadian sleep/wake cycle","termid":"GO:0042749"}


id: GO:0046289
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving isoflavonoid phytoalexins, a group of water-soluble phenolic derivatives isomeric with flavonoids that possess antibiotic activity and are produced by plant tissues in response to infection.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isoflavonoid metabolic process","termid":"GO:0046287"},{"relation_name":"is_a","term_name":"phytoalexin metabolic process","termid":"GO:0052314"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"isoflavonoid phytoalexin metabolic process","synonyms":[{"name":"isoflavonoid phytoalexin metabolism","type":"exact"}],"termid":"GO:0046289"}


id: PBO:0071362
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L29 pseudogene 21","termid":"PBO:0071362"}


id: PBO:0074907
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 78","termid":"PBO:0074907"}


id: GO:1902579
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A localization which involves another organism.","definition_xrefs":["GO_REF:0000089","GOC:TermGenie","GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete multi-organism localization (obsolete GO:1902579)","synonyms":[{"name":"multi organism localization","type":"exact"}],"termid":"GO:1902579"}


id: GO:0051755
data:
  {"annotated_genes":["SJAG_02104","SJAG_04457"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94245,110563],"is_not":false,"summary":null,"term":"GO:0051755"}]},"cv_name":"biological_process","definition":"The cell cycle process in which sister chromatid arms are physically detached from each other during meiosis.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic cell cycle process","termid":"GO:1903046"},{"relation_name":"part_of","term_name":"meiosis I","termid":"GO:0007127"},{"relation_name":"part_of","term_name":"meiotic sister chromatid separation","termid":"GO:0051757"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02104":null,"SJAG_04457":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0140013"}],"interesting_parent_ids":["GO:0140013","GO:0008150","GO:0007049"],"is_obsolete":false,"name":"meiotic sister chromatid arm separation","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0051755","terms_by_termid":{"GO:0051755":null}}


id: PBO:0067028
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 41, pseudogene","termid":"PBO:0067028"}


id: PBO:0004951
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adducin (predicted)","termid":"PBO:0004951"}


id: MONDO:0019641
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pauci-immune glomerulonephritis (GN) is one of the most frequent causes of rapidly progressive GN (RPGN). It is characterized clinically by renal manifestations of RPGN (hematuria, hypertension) leading to renal failure within days or weeks, and may be associated with manifestations of systemic vasculitis (arthralgia, fever, seizures, mono neuritis and lung involvement). Pauci-immune GN is histologically characterized by focal necrotizing and crescentic GN, with mild or absent glomerular staining for immunoglobulin and complement by fluorescence microscopy, which may manifest either as part of a systemic small vessel vasculitis (including microscopic polyangiitis, granulomatosis with polyangiitis and eosinophilic granulomatosis with polyangiitis), or rarely as part of renal-limited vasculitis (RLV, idiopathic crescentic GN). Immunologic classification is based on the presence or absence of circulating anti-neutrophil cytoplasmic antibodies (ANCAs), namely pauci-immune-GN with ANCA and pauci-immune GN without ANCA.","definition_xrefs":["Orphanet:93126"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete secondary glomerular disease (obsolete MONDO:0019724)","termid":"MONDO:0019724"},{"relation_name":"is_a","term_name":"glomerulonephritis","termid":"MONDO:0002462"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"Pauci-immune glomerulonephritis","secondary_identifiers":["icd11.foundation:1359757645","GARD:19175","MEDGEN:575439","UMLS:C0343196"],"termid":"MONDO:0019641","xrefs":{"Monarch":{"xref_id":"0019641"}}}


id: MONDO:0018638
data:
  {"annotated_genes":["SJAG_04335"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87042],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013782"}]},"cv_name":"mondo","definition":"An inherited or acquired disorder of electrolyte metabolism, characterized by the inability of the renal tubules to respond to aldosterone. It is manifested by hyperkalemic metabolic acidosis, urinary salt wasting, normal or increased aldosterone secretion and normal glomerular filtration rate.","definition_xrefs":["NCIT:C85034"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal tubular transport disease","termid":"MONDO:0006510"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04335":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"pseudohypoaldosteronism","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["ICD9:255.8","GARD:21861","UMLS:C0033805","NANDO:2100133","Orphanet:444916","SCTID:77098009","DOID:4479","MEDGEN:18721","MESH:D011546","NANDO:2200367"],"termid":"MONDO:0018638","terms_by_termid":{"MONDO:0013782":null},"xrefs":{"Monarch":{"xref_id":"0018638"}}}


id: PBO:0076213
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small ubiquitin like modifier 4","termid":"PBO:0076213"}


id: PBO:0083842
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Exocyst subunit with dual roles in exocytosis and spliceosome assembly; subunit of the the exocyst complex which mediates polarized targeting and tethering of post-Golgi secretory vesicles to active sites of exocytosis at the plasma membrane (PM) prior to SNARE-mediated fusion; required for exocyst assembly and targeting the complex to specific sites on the bud tip PM; associates the U1 snRNP; role in pre-mRNA splicing and prespliceosome formation; possible Cdc28 substrate","termid":"PBO:0083842"}


id: GO:1900396
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of kojic acid biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of kojic acid biosynthetic process","termid":"GO:1900394"},{"relation_name":"is_a","term_name":"positive regulation of alcohol biosynthetic process","termid":"GO:1902932"},{"relation_name":"positively_regulates","term_name":"kojic acid biosynthetic process","termid":"GO:2001317"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"positive regulation of kojic acid biosynthetic process","synonyms":[{"name":"activation of 5-hydroxy-2-(hydroxymethyl)-4H-pyran-4-one anabolism","type":"exact"},{"name":"activation of 5-hydroxy-2-(hydroxymethyl)-4H-pyran-4-one biosynthesis","type":"exact"},{"name":"activation of 5-hydroxy-2-(hydroxymethyl)-4H-pyran-4-one biosynthetic process","type":"exact"},{"name":"activation of 5-hydroxy-2-(hydroxymethyl)-4H-pyran-4-one formation","type":"exact"},{"name":"activation of 5-hydroxy-2-(hydroxymethyl)-4H-pyran-4-one synthesis","type":"exact"},{"name":"activation of C6H6O4 anabolism","type":"related"},{"name":"activation of C6H6O4 biosynthesis","type":"related"},{"name":"activation of C6H6O4 biosynthetic process","type":"related"},{"name":"activation of C6H6O4 formation","type":"related"},{"name":"activation of C6H6O4 synthesis","type":"related"},{"name":"activation of kojic acid anabolism","type":"exact"},{"name":"activation of kojic acid biosynthesis","type":"exact"},{"name":"activation of kojic acid biosynthetic process","type":"narrow"},{"name":"activation of kojic acid formation","type":"exact"},{"name":"activation of kojic acid synthesis","type":"exact"},{"name":"positive regulation of 5-hydroxy-2-(hydroxymethyl)-4H-pyran-4-one anabolism","type":"exact"},{"name":"positive regulation of 5-hydroxy-2-(hydroxymethyl)-4H-pyran-4-one biosynthesis","type":"exact"},{"name":"positive regulation of 5-hydroxy-2-(hydroxymethyl)-4H-pyran-4-one biosynthetic process","type":"exact"},{"name":"positive regulation of 5-hydroxy-2-(hydroxymethyl)-4H-pyran-4-one formation","type":"exact"},{"name":"positive regulation of 5-hydroxy-2-(hydroxymethyl)-4H-pyran-4-one synthesis","type":"exact"},{"name":"positive regulation of C6H6O4 anabolism","type":"related"},{"name":"positive regulation of C6H6O4 biosynthesis","type":"related"},{"name":"positive regulation of C6H6O4 biosynthetic process","type":"related"},{"name":"positive regulation of C6H6O4 formation","type":"related"},{"name":"positive regulation of C6H6O4 synthesis","type":"related"},{"name":"positive regulation of kojic acid anabolism","type":"exact"},{"name":"positive regulation of kojic acid biosynthesis","type":"exact"},{"name":"positive regulation of kojic acid formation","type":"exact"},{"name":"positive regulation of kojic acid synthesis","type":"exact"},{"name":"up regulation of 5-hydroxy-2-(hydroxymethyl)-4H-pyran-4-one anabolism","type":"exact"},{"name":"up regulation of 5-hydroxy-2-(hydroxymethyl)-4H-pyran-4-one biosynthesis","type":"exact"},{"name":"up regulation of 5-hydroxy-2-(hydroxymethyl)-4H-pyran-4-one biosynthetic process","type":"exact"},{"name":"up regulation of 5-hydroxy-2-(hydroxymethyl)-4H-pyran-4-one formation","type":"exact"},{"name":"up regulation of 5-hydroxy-2-(hydroxymethyl)-4H-pyran-4-one synthesis","type":"exact"},{"name":"up regulation of C6H6O4 anabolism","type":"related"},{"name":"up regulation of C6H6O4 biosynthesis","type":"related"},{"name":"up regulation of C6H6O4 biosynthetic process","type":"related"},{"name":"up regulation of C6H6O4 formation","type":"related"},{"name":"up regulation of C6H6O4 synthesis","type":"related"},{"name":"up regulation of kojic acid anabolism","type":"exact"},{"name":"up regulation of kojic acid biosynthesis","type":"exact"},{"name":"up regulation of kojic acid biosynthetic process","type":"exact"},{"name":"up regulation of kojic acid formation","type":"exact"},{"name":"up regulation of kojic acid synthesis","type":"exact"},{"name":"up-regulation of 5-hydroxy-2-(hydroxymethyl)-4H-pyran-4-one anabolism","type":"exact"},{"name":"up-regulation of 5-hydroxy-2-(hydroxymethyl)-4H-pyran-4-one biosynthesis","type":"exact"},{"name":"up-regulation of 5-hydroxy-2-(hydroxymethyl)-4H-pyran-4-one biosynthetic process","type":"exact"},{"name":"up-regulation of 5-hydroxy-2-(hydroxymethyl)-4H-pyran-4-one formation","type":"exact"},{"name":"up-regulation of 5-hydroxy-2-(hydroxymethyl)-4H-pyran-4-one synthesis","type":"exact"},{"name":"up-regulation of C6H6O4 anabolism","type":"related"},{"name":"up-regulation of C6H6O4 biosynthesis","type":"related"},{"name":"up-regulation of C6H6O4 biosynthetic process","type":"related"},{"name":"up-regulation of C6H6O4 formation","type":"related"},{"name":"up-regulation of C6H6O4 synthesis","type":"related"},{"name":"up-regulation of kojic acid anabolism","type":"exact"},{"name":"up-regulation of kojic acid biosynthesis","type":"exact"},{"name":"up-regulation of kojic acid biosynthetic process","type":"exact"},{"name":"up-regulation of kojic acid formation","type":"exact"},{"name":"up-regulation of kojic acid synthesis","type":"exact"},{"name":"upregulation of 5-hydroxy-2-(hydroxymethyl)-4H-pyran-4-one anabolism","type":"exact"},{"name":"upregulation of 5-hydroxy-2-(hydroxymethyl)-4H-pyran-4-one biosynthesis","type":"exact"},{"name":"upregulation of 5-hydroxy-2-(hydroxymethyl)-4H-pyran-4-one biosynthetic process","type":"exact"},{"name":"upregulation of 5-hydroxy-2-(hydroxymethyl)-4H-pyran-4-one formation","type":"exact"},{"name":"upregulation of 5-hydroxy-2-(hydroxymethyl)-4H-pyran-4-one synthesis","type":"exact"},{"name":"upregulation of C6H6O4 anabolism","type":"related"},{"name":"upregulation of C6H6O4 biosynthesis","type":"related"},{"name":"upregulation of C6H6O4 biosynthetic process","type":"related"},{"name":"upregulation of C6H6O4 formation","type":"related"},{"name":"upregulation of C6H6O4 synthesis","type":"related"},{"name":"upregulation of kojic acid anabolism","type":"exact"},{"name":"upregulation of kojic acid biosynthesis","type":"exact"},{"name":"upregulation of kojic acid biosynthetic process","type":"exact"},{"name":"upregulation of kojic acid formation","type":"exact"},{"name":"upregulation of kojic acid synthesis","type":"exact"}],"termid":"GO:1900396"}


id: FYPO:0003063
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the size, shape, or structure of the cytoskeleton is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cytoskeleton","termid":"FYPO:0002397"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abnormal cytoskeleton morphology","termid":"FYPO:0003063"}


id: PBO:0068092
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 399","termid":"PBO:0068092"}


id: GO:0102184
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: cycloartenol + NADH + O2 + H+ = 4alpha-hydroxymethyl,4beta,14alpha-dimethyl-9beta,19-cyclo-5alpha-cholest-24-en-3beta-ol + NAD + H2O.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete cycloartenol 4alpha-methyl oxidase activity (obsolete GO:0102184)","termid":"GO:0102184"}


id: PBO:0005619
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iron hydrogenase (predicted)","termid":"PBO:0005619"}


id: GO:0102247
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2 H+ + 2 a malonyl-[acp] = 2 carbon dioxide + an acetoacetyl-[acp] + a holo-[acyl-carrier protein].","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete malonyl-malonyl acyl carrier protein-condensing enzyme activity (obsolete GO:0102247)","termid":"GO:0102247"}


id: PR:P24782
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- dbp2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P24782"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase dbp2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP8B7.16c","synonyms":[{"name":"Spom972h-dbp2","type":"exact"},{"name":"p68-like protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P24782"}


id: MONDO:1011164
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Osteoarthritis that occurs in cattle.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"osteoarthritis, non-human animal","termid":"MONDO:1010297"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"osteoarthritis, cattle","secondary_identifiers":["OMIA:000747-9913"],"termid":"MONDO:1011164","xrefs":{"Monarch":{"xref_id":"1011164"}}}


id: GO:0007003
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete telomere binding (obsolete GO:0007003)","synonyms":[{"name":"telomere binding","type":"exact"}],"termid":"GO:0007003"}


id: FYPO:0006548
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which gene expression occurs to a greater extent than normal. One or more parts of gene expression, such as transcription or translation, may be affected, and all genes, or a specific subset of genes, may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal gene expression","termid":"FYPO:0006551"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0006551"],"is_obsolete":false,"name":"increased gene expression","termid":"FYPO:0006548"}


id: PBO:0082599
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Clathrin coat accessory factor; involved in clathrin-mediated vesicle trafficking; may function to link the AP-1 clathrin adaptor complex with the Rab GTPase Ypt31p; has structural similarity to G-proteins; mouse homolog Aagab (p34) functionally complements irc6 null mutation; null mutant displays increased levels of spontaneous Rad52p foci","termid":"PBO:0082599"}


id: MONDO:0032597
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"congenital myasthenic syndrome","termid":"MONDO:0018940"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"myasthenic syndrome, congenital, 24, presynaptic","secondary_identifiers":["MEDGEN:1648337","OMIM:618198","UMLS:C4748684","GARD:16309"],"synonyms":[{"name":"CMS24","type":"related"},{"name":"MYASTHENIC SYNDROME, CONGENITAL, 24, PRESYNAPTIC","type":"related"}],"termid":"MONDO:0032597","xrefs":{"Monarch":{"xref_id":"0032597"}}}


id: GO:0098615
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + dimethyl selenide => S-adenosyl-L-homocysteine + trimethylselenonium.","definition_xrefs":["PMID:3350800","PMID:17988700"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674","GO:0016741"],"is_obsolete":false,"name":"dimethyl selenide methyltransferase activity","secondary_identifiers":["Reactome:R-HSA-2408554"],"termid":"GO:0098615"}


id: PBO:0062717
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 51 subfamily N member 1 pseudogene","termid":"PBO:0062717"}


id: PBO:0054316
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1708","termid":"PBO:0054316"}


id: PBO:0000809
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PMT1 subfamily","termid":"PBO:0000809"}


id: GO:0042998
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the transport of proteins from the Golgi to the plasma membrane.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of Golgi to plasma membrane protein transport","termid":"GO:0042996"},{"relation_name":"is_a","term_name":"positive regulation of protein transport","termid":"GO:0051222"},{"relation_name":"is_a","term_name":"positive regulation of protein localization to plasma membrane","termid":"GO:1903078"},{"relation_name":"positively_regulates","term_name":"Golgi to plasma membrane protein transport","termid":"GO:0043001"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0016192","GO:0008150"],"is_obsolete":false,"name":"positive regulation of Golgi to plasma membrane protein transport","synonyms":[{"name":"activation of Golgi to plasma membrane protein transport","type":"narrow"},{"name":"stimulation of Golgi to plasma membrane protein transport","type":"narrow"},{"name":"up regulation of Golgi to plasma membrane protein transport","type":"exact"},{"name":"up-regulation of Golgi to plasma membrane protein transport","type":"exact"},{"name":"upregulation of Golgi to plasma membrane protein transport","type":"exact"}],"termid":"GO:0042998"}


id: PR:Q9Y821
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pmc4 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9Y821"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator of RNA polymerase II transcription subunit 4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1105.06","synonyms":[{"name":"RNA polymerase II mediator complex protein pmc4 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-pmc4","type":"exact"},{"name":"mediator complex subunit 4 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9Y821"}


id: PBO:0029373
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_medial_cortex_during_vegetative_growth,_with_protein_distributed_in_non-growing_half_of_cell","termid":"PBO:0029373"}


id: GO:0140531
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of osmosensory signaling MAPK cascade.","definition_xrefs":["PMID:31911490"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of osmosensory signaling MAPK cascade (obsolete GO:0140531)","termid":"GO:0140531"}


id: PBO:0062110
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily C member 9 pseudogene","termid":"PBO:0062110"}


id: MONDO:0003537
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm of lymphoblasts committed to the T-cell lineage, typically composed of small to medium-sized blast cells. When the neoplasm involves predominantly the bone marrow and the peripheral blood, it is called T acute lymphoblastic leukemia. When it involves nodal or extranodal sites it is called T lymphoblastic lymphoma. (WHO, 2001)","definition_xrefs":["NCIT:C8694"],"direct_ancestors":[{"relation_name":"is_a","term_name":"precursor lymphoblastic lymphoma/leukemia","termid":"MONDO:0003538"},{"relation_name":"is_a","term_name":"T-cell and NK-cell neoplasm","termid":"MONDO:0024615"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"precursor T-lymphoblastic lymphoma/leukemia","secondary_identifiers":["UMLS:C1301359","DOID:5599","ICDO:9837/3","MEDGEN:224897"],"synonyms":[{"name":"T lymphoblastic leukemia/lymphoma","type":"exact"},{"name":"precursor T lymphoblastic leukemia/lymphoma","type":"exact"},{"name":"precursor T lymphoblastic lymphoma/leukemia","type":"exact"},{"name":"precursor T-lymphoblastic lymphoma/leukemia","type":"exact"}],"termid":"MONDO:0003537","xrefs":{"Monarch":{"xref_id":"0003537"}}}


id: SO:0000312
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Attribute to describe a feature that has been experimentally verified.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"validated","termid":"SO:0000789"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"experimentally_determined","synonyms":[{"name":"experimentally determined","type":"exact"}],"termid":"SO:0000312"}


id: GO:2000951
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of xyloglucan catabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of xyloglucan metabolic process","termid":"GO:2000948"},{"relation_name":"is_a","term_name":"regulation of hemicellulose catabolic process","termid":"GO:2000988"},{"relation_name":"regulates","term_name":"xyloglucan catabolic process","termid":"GO:2000899"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"regulation of xyloglucan catabolic process","synonyms":[{"name":"regulation of xyloglucan catabolism","type":"exact"}],"termid":"GO:2000951"}


id: GO:0035415
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of mitotic prometaphase, the stage following prophase in mitosis (in higher eukaryotes) during which the nuclear envelope is disrupted and breaks into membrane vesicles, and the spindle microtubules enter the nuclear region.","definition_xrefs":["GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of mitotic prometaphase (obsolete GO:0035415)","synonyms":[{"name":"regulation of mitotic prometaphase","type":"exact"}],"termid":"GO:0035415"}


id: PBO:0050133
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 1 pseudogene 43","termid":"PBO:0050133"}


id: MONDO:0017706
data:
  {"annotated_genes":["SJAG_01625","SJAG_02717","SJAG_03032","SJAG_04859","SJAG_03286","SJAG_04295","SJAG_04704","SJAG_04654","SJAG_04084","SJAG_03824","SJAG_05175","SJAG_03448","SJAG_05182","SJAG_00325","SJAG_02099","SJAG_02131","SJAG_03333","SJAG_01570","SJAG_02042","SJAG_04645","SJAG_04321","SJAG_03635","SJAG_02139","SJAG_01465","SJAG_01826","SJAG_03147","SJAG_00886","SJAG_04119","SJAG_01070","SJAG_04358","SJAG_04706","SJAG_04640","SJAG_01991","SJAG_00898","SJAG_01702","SJAG_01536"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86002],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0100255"},{"annotations":[85490],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014648"},{"annotations":[87362,87361],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009114"},{"annotations":[86544],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012803"},{"annotations":[85749,85748,85746,85745,85747],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010027"},{"annotations":[85454],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0040500"},{"annotations":[86635],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032662"},{"annotations":[86413],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032665"},{"annotations":[87320],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032789"},{"annotations":[87455],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030533"},{"annotations":[86770],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0957288"},{"annotations":[87456],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0958204"},{"annotations":[86855],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013173"},{"annotations":[86313],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013528"},{"annotations":[86765],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014348"},{"annotations":[86654],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014409"},{"annotations":[87448,87449],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012613"},{"annotations":[85491],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014649"},{"annotations":[86185],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014815"},{"annotations":[87511],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014930"},{"annotations":[87377],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014996"},{"annotations":[87221],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0015020"},{"annotations":[87059],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0044313"},{"annotations":[86709,86708,86707],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0020850"},{"annotations":[87450],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012615"},{"annotations":[86677],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013853"},{"annotations":[87267],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014485"},{"annotations":[86172],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013624"},{"annotations":[85730,85733,85734,85732,85731],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011449"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inborn 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transmembrane transport and absorption","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["icd11.foundation:1315315105","MEDGEN:1842168","Orphanet:309001","UMLS:C5681069","GARD:21313"],"synonyms":[{"name":"disorder of carbohydrate absorption and transport","type":"exact"}],"termid":"MONDO:0017706","terms_by_termid":{"MONDO:0009114":null,"MONDO:0010027":null,"MONDO:0011449":null,"MONDO:0012613":null,"MONDO:0012615":null,"MONDO:0012803":null,"MONDO:0013173":null,"MONDO:0013528":null,"MONDO:0013624":null,"MONDO:0013853":null,"MONDO:0014348":null,"MONDO:0014409":null,"MONDO:0014485":null,"MONDO:0014648":null,"MONDO:0014649":null,"MONDO:0014815":null,"MONDO:0014930":null,"MONDO:0014996":null,"MONDO:0015020":null,"MONDO:0020850":null,"MONDO:0030533":null,"MONDO:0032662":null,"MONDO:0032665":null,"MONDO:0032789":null,"MONDO:0040500":null,"MONDO:0044313":null,"MONDO:0100255":null,"MONDO:0957288":null,"MONDO:0958204":null},"xrefs":{"Monarch":{"xref_id":"0017706"}}}


id: PBO:0112847
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"asynchronous replication autosomal RNA 8-1","termid":"PBO:0112847"}


id: PBO:0059303
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L49 pseudogene 2","termid":"PBO:0059303"}


id: PBO:0045060
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"discs large MAGUK scaffold protein 2","termid":"PBO:0045060"}


id: PBO:0042803
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cerberus 1, DAN family BMP antagonist","termid":"PBO:0042803"}


id: PBO:0068608
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 59, pseudogene","termid":"PBO:0068608"}


id: PBO:0070815
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L12 pseudogene 45","termid":"PBO:0070815"}


id: PBO:0088359
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diphthamide biosynthesis protein Dph4","termid":"PBO:0088359"}


id: MONDO:0005527
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A group of neurologic disorders caused by damage to the nervous system following exposure to pharmacologic, biologic, and chemical agents. Examples of neurotoxins include chemotherapy agents, radiation treatment, heavy metals, pesticides, and food additives.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder","termid":"MONDO:0005071"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"toxic encephalopathy","secondary_identifiers":["NCIT:C27961","SCTID:28394000","Wikipedia:Toxic_encephalopathy","ICD9:349.82","MESH:D020258","DOID:3602","EFO:0005595","ICD10CM:G92"],"synonyms":[{"name":"neurotoxicity","type":"exact"},{"name":"neurotoxicity syndrome","type":"exact"},{"name":"neurotoxicity syndromes","type":"related"}],"termid":"MONDO:0005527","xrefs":{"Monarch":{"xref_id":"0005527"}}}


id: PBO:0029325
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H2A_phosphorylation_at_rDNA","termid":"PBO:0029325"}


id: MONDO:0020425
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"coronary artery congenital malformation","termid":"MONDO:0015203"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"abnormal number of coronary ostia","secondary_identifiers":["GARD:19644","UMLS:C5191081","MEDGEN:1676211","Orphanet:99089"],"termid":"MONDO:0020425","xrefs":{"Monarch":{"xref_id":"0020425"}}}


id: PBO:0075324
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"superoxide dismutase 2 pseudogene 1","termid":"PBO:0075324"}


id: GO:0038097
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An Fc-epsilon receptor signaling pathway that results in the change in morphology and behavior of a mast cell resulting from exposure to a cytokine, chemokine, soluble factor, or to (at least in mammals) an antigen which the mast cell has specifically bound via IgE bound to Fc-epsilonRI receptors.","definition_xrefs":["GOC:phg","PMID:12413516"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Fc receptor mediated stimulatory signaling pathway","termid":"GO:0002431"},{"relation_name":"is_a","term_name":"positive regulation of mast cell activation","termid":"GO:0033005"},{"relation_name":"is_a","term_name":"Fc-epsilon receptor signaling pathway","termid":"GO:0038095"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of mast cell activation by Fc-epsilon receptor signaling pathway","synonyms":[{"name":"Fc epsilon RI-dependent mast cell activation","type":"exact"},{"name":"Fc epsilon RI-mediated mast cell activation","type":"exact"},{"name":"positive regulation of mast cell activation by Fc-epsilon receptor signalling pathway","type":"exact"}],"termid":"GO:0038097"}


id: GO:0070508
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of cholesterol into a cell or organelle.","definition_xrefs":["GOC:BHF","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cholesterol transport","termid":"GO:0030301"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"cholesterol import","synonyms":[{"name":"cholesterol uptake","type":"exact"}],"termid":"GO:0070508"}


id: PBO:0113460
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of TFIID, TFIIF, INO80, SWI/SNF, and NuA3 complexes; involved in RNA polymerase II transcription initiation and in chromatin modification; serves as an additional DNA binding domain for the complex; contains a YEATS domain","termid":"PBO:0113460"}


id: MONDO:0025370
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Tumors or cancer of the urogenital system in either the male or the female.","definition_xrefs":["MESH:D014565"],"gene_count":0,"genotype_count":0,"name":"obsolete urogenital neoplasm (obsolete MONDO:0025370)","synonyms":[{"name":"genito-urinary neoplasm","type":"related"},{"name":"genito-urinary neoplasms","type":"related"},{"name":"genitourinary neoplasm","type":"related"},{"name":"genitourinary neoplasms","type":"related"},{"name":"genitourinary system neoplasm","type":"exact"},{"name":"genitourinary system tumor","type":"exact"},{"name":"neoplasm of genitourinary system","type":"exact"},{"name":"neoplasm, genito-urinary","type":"related"},{"name":"neoplasm, genitourinary","type":"related"},{"name":"neoplasm, urogenital","type":"related"},{"name":"neoplasms, genito-urinary","type":"related"},{"name":"neoplasms, genitourinary","type":"related"},{"name":"neoplasms, urogenital","type":"related"},{"name":"tumor of genitourinary system","type":"exact"},{"name":"urogenital neoplasm","type":"exact"}],"termid":"MONDO:0025370","xrefs":{"Monarch":{"xref_id":"0025370"}}}


id: PBO:0062170
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily K member 13","termid":"PBO:0062170"}


id: PBO:0003208
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"replication licensing factor Cdt1","termid":"PBO:0003208"}


id: GO:0005161
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a platelet-derived growth factor receptor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"growth factor receptor binding","termid":"GO:0070851"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"platelet-derived growth factor receptor binding","synonyms":[{"name":"PDGF","type":"narrow"},{"name":"PDGF receptor binding","type":"exact"},{"name":"PDGFR binding","type":"exact"},{"name":"platelet-derived growth factor","type":"narrow"},{"name":"platelet-derived growth factor receptor ligand","type":"narrow"}],"termid":"GO:0005161"}


id: MONDO:1012058
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"degenerative myopathy of obturator-externus, non-human animal","termid":"MONDO:1011788"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"degenerative myopathy of obturator-externus, dog","secondary_identifiers":["OMIA:000265-9615"],"termid":"MONDO:1012058","xrefs":{"Monarch":{"xref_id":"1012058"}}}


id: GO:0071069
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alpha4-beta1 integrin complex bound to thrombospondin-1.","definition_xrefs":["PMID:11980922"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005886","GO:0005575"],"is_obsolete":false,"name":"alpha4-beta1 integrin-thrombospondin-1 complex","synonyms":[{"name":"ITGA4-ITGB1-THBS1 complex","type":"narrow"}],"termid":"GO:0071069"}


id: PBO:0069046
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 291, pseudogene","termid":"PBO:0069046"}


id: FYPO:0003537
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the rate, or speed, of premeiotic DNA replication is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased rate of DNA replication","termid":"FYPO:0001981"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000293"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000293","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"decreased rate of premeiotic DNA replication","synonyms":[{"name":"reduced rate of premeiotic DNA replication","type":"exact"}],"termid":"FYPO:0003537"}


id: PBO:0113581
data:
  {"annotation_feature_type":"gene","cv_name":"species_dist","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved in fungi eukaryotes","termid":"PBO:0113581"}


id: PBO:0059107
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MORN repeat containing 3","termid":"PBO:0059107"}


id: MONDO:0024322
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id: MONDO:0003809
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant hemangiopericytoma arising in the mediastinum.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"mediastinum sarcoma","termid":"MONDO:0002852"},{"relation_name":"is_a","term_name":"hemangiopericytoma, malignant","termid":"MONDO:0009330"},{"relation_name":"is_a","term_name":"neoplasm of mediastinum","termid":"MONDO:0021386"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"malignant mediastinum hemangiopericytoma","secondary_identifiers":["NCIT:C6608","UMLS:C1334598","DOID:6209","MEDGEN:235298"],"synonyms":[{"name":"malignant hemangiopericytoma of mediastinum","type":"exact"},{"name":"malignant hemangiopericytoma of the mediastinum","type":"exact"},{"name":"malignant mediastinal hemangiopericytoma","type":"exact"},{"name":"mediastinum hemangiopericytoma","type":"exact"},{"name":"mediastinum spindle cell tumor","type":"exact"},{"name":"mediastinum spindle cell tumour","type":"exact"}],"termid":"MONDO:0003809","xrefs":{"Monarch":{"xref_id":"0003809"}}}


id: GO:0055002
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a striated muscle cell over time, from its formation to the mature structure. Striated muscle cells contain fibers that are divided by transverse bands into striations, and cardiac and skeletal muscle are types of striated muscle.","definition_xrefs":["CL:0000737","GOC:devbiol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"muscle cell development","termid":"GO:0055001"},{"relation_name":"part_of","term_name":"striated muscle cell differentiation","termid":"GO:0051146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"striated muscle cell development","termid":"GO:0055002"}


id: GO:0007498
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the mesoderm over time, from its formation to the mature structure. The mesoderm is the middle germ layer that develops into muscle, bone, cartilage, blood and connective tissue.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tissue development","termid":"GO:0009888"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesoderm development","termid":"GO:0007498"}


id: MONDO:0100437
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A retinopathy caused by a variant in the X-linked gene, RPGR.","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited retinal dystrophy","termid":"MONDO:0019118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"RPGR-related retinopathy","synonyms":[{"name":"COD1","type":"narrow"},{"name":"CORDX1","type":"narrow"},{"name":"RP3","type":"narrow"},{"name":"RPGR retinitis pigmentosa","type":"narrow"},{"name":"RPGR retinopathy","type":"exact"},{"name":"X-linked cone dystrophy 1","type":"narrow"},{"name":"X-linked cone-rod dystrophy 1","type":"narrow"},{"name":"X-linked cone-rod dystrophy type 1","type":"narrow"},{"name":"choroidoretinal degeneration with retinal reflex in heterozygous women","type":"narrow"},{"name":"cone dystrophy 1, X-linked","type":"narrow"},{"name":"cone dystrophy X-linked 1","type":"narrow"},{"name":"cone-rod degeneration, X-linked","type":"narrow"},{"name":"cone-rod dystrophy X-linked 1","type":"narrow"},{"name":"cone-rod dystrophy, X-linked, 1","type":"narrow"},{"name":"cone-rod dystrophy, X-linked, type 1","type":"narrow"},{"name":"macular degeneration, X-linked atrophic","type":"narrow"},{"name":"retinal ciliopathy due to mutation in the RPGR gene","type":"narrow"},{"name":"retinitis pigmentosa 15","type":"narrow"},{"name":"retinitis pigmentosa 3","type":"narrow"},{"name":"retinitis pigmentosa caused by mutation in RPGR","type":"narrow"},{"name":"retinitis pigmentosa type 3","type":"narrow"}],"termid":"MONDO:0100437","xrefs":{"Monarch":{"xref_id":"0100437"}}}


id: GO:0008814
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + citrate = acetate + (3S)-citryl-CoA.","definition_xrefs":["EC:2.8.3.10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CoA-transferase activity","termid":"GO:0008410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674","GO:0016782"],"is_obsolete":false,"name":"citrate CoA-transferase activity","secondary_identifiers":["MetaCyc:CITTRANS-RXN","RHEA:19405"],"synonyms":[{"name":"acetyl-CoA:citrate CoA-transferase activity","type":"related"}],"termid":"GO:0008814"}


id: GO:0106399
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: an acyl-coenzyme A + H2O = adenosine 3',5'-bisphosphate + an acyl-4'-phosphopantetheine + 2 H+.","definition_xrefs":["PMID:32915949"],"gene_count":0,"genotype_count":0,"name":"obsolete acyl-coenzyme A diphosphatase activity (obsolete GO:0106399)","synonyms":[{"name":"acyl-CoA diphosphatase activity","type":"exact"},{"name":"acyl-CoA pyrophosphatase activity","type":"exact"},{"name":"acyl-coenzyme A pyrophosphatase activity","type":"exact"}],"termid":"GO:0106399"}


id: GO:0035794
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of the passage or uptake of molecules by the mitochondrial membrane.","definition_xrefs":["GOC:bf","PMID:12546810"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mitochondrial membrane permeability","termid":"GO:0046902"},{"relation_name":"is_a","term_name":"positive regulation of membrane permeability","termid":"GO:1905710"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0007005"}],"interesting_parent_ids":["GO:0061024","GO:0007005","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of mitochondrial membrane permeability","synonyms":[{"name":"MPT","type":"narrow"},{"name":"mitochondrial membrane permeability transition","type":"narrow"},{"name":"mitochondrial membrane permeabilization","type":"narrow"},{"name":"mitochondrial permeability transition","type":"narrow"},{"name":"positive regulation of transport across mitochondrial membrane","type":"exact"}],"termid":"GO:0035794"}


id: PBO:0114293
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial outer membrane receptor for cytosolic ribosomes","termid":"PBO:0114293"}


id: PBO:0065197
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-mRNA processing factor 18","termid":"PBO:0065197"}


id: MONDO:0013470
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any generalized epilepsy with febrile seizures plus in which the cause of the disease is a mutation in the SCN9A gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"generalized epilepsy with febrile seizures plus","termid":"MONDO:0018214"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"generalized epilepsy with febrile seizures plus, type 7","secondary_identifiers":["MESH:C567827","GARD:18665","DOID:0111295","MEDGEN:416630","OMIM:613863","UMLS:C2751778"],"synonyms":[{"name":"GEFSP7","type":"related"},{"name":"Gefs+, type 7","type":"related"},{"name":"SCN9A generalised epilepsy with febrile seizures plus","type":"exact"},{"name":"SCN9A generalized epilepsy with febrile seizures plus","type":"exact"},{"name":"febrile seizures, familial, 3B","type":"related"},{"name":"generalised epilepsy with febrile seizures plus caused by mutation in SCN9A","type":"exact"},{"name":"generalized epilepsy with febrile seizures plus caused by mutation in SCN9A","type":"exact"},{"name":"generalized epilepsy with febrile seizures plus, type 7","type":"exact"}],"termid":"MONDO:0013470","xrefs":{"Monarch":{"xref_id":"0013470"}}}


